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Network neighborhood for query Sequence : IRX3_MOUSE

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IRX3_MOUSE
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

IRX3_MOUSE
θ value	1.0968e-122 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	303	Target Neighborhood Hits	303	Shared Neighborhood Hits	303
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_HUMAN
θ value	2.89973e-107 (rank : 2)	NC score	0.982569 (rank : 2)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	261
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX1_MOUSE
θ value	1.0458e-56 (rank : 3)	NC score	0.950687 (rank : 3)
Query Neighborhood Hits	303	Target Neighborhood Hits	269	Shared Neighborhood Hits	219
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_HUMAN
θ value	1.72781e-51 (rank : 4)	NC score	0.946548 (rank : 4)
Query Neighborhood Hits	303	Target Neighborhood Hits	285	Shared Neighborhood Hits	221
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX5_MOUSE
θ value	2.50074e-42 (rank : 5)	NC score	0.914114 (rank : 9)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	205
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

IRX6_MOUSE
θ value	9.50281e-42 (rank : 6)	NC score	0.920494 (rank : 6)
Query Neighborhood Hits	303	Target Neighborhood Hits	256	Shared Neighborhood Hits	206
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX5_HUMAN
θ value	2.34062e-40 (rank : 7)	NC score	0.914148 (rank : 8)
Query Neighborhood Hits	303	Target Neighborhood Hits	362	Shared Neighborhood Hits	213
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

IRX2_HUMAN
θ value	3.05695e-40 (rank : 8)	NC score	0.910549 (rank : 11)
Query Neighborhood Hits	303	Target Neighborhood Hits	358	Shared Neighborhood Hits	210
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX2_MOUSE
θ value	2.42216e-37 (rank : 9)	NC score	0.916655 (rank : 7)
Query Neighborhood Hits	303	Target Neighborhood Hits	264	Shared Neighborhood Hits	209
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX6_HUMAN
θ value	2.67802e-36 (rank : 10)	NC score	0.923310 (rank : 5)
Query Neighborhood Hits	303	Target Neighborhood Hits	262	Shared Neighborhood Hits	216
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX4_MOUSE
θ value	3.4976e-36 (rank : 11)	NC score	0.909476 (rank : 12)
Query Neighborhood Hits	303	Target Neighborhood Hits	286	Shared Neighborhood Hits	219
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX4_HUMAN
θ value	1.01765e-35 (rank : 12)	NC score	0.912875 (rank : 10)
Query Neighborhood Hits	303	Target Neighborhood Hits	276	Shared Neighborhood Hits	218
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

TGIF_HUMAN
θ value	4.0297e-08 (rank : 13)	NC score	0.619485 (rank : 16)
Query Neighborhood Hits	303	Target Neighborhood Hits	109	Shared Neighborhood Hits	64
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF_MOUSE
θ value	4.0297e-08 (rank : 14)	NC score	0.627853 (rank : 13)
Query Neighborhood Hits	303	Target Neighborhood Hits	125	Shared Neighborhood Hits	66
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

PKNX2_HUMAN
θ value	5.26297e-08 (rank : 15)	NC score	0.569753 (rank : 21)
Query Neighborhood Hits	303	Target Neighborhood Hits	133	Shared Neighborhood Hits	84
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_MOUSE
θ value	5.26297e-08 (rank : 16)	NC score	0.563785 (rank : 22)
Query Neighborhood Hits	303	Target Neighborhood Hits	197	Shared Neighborhood Hits	86
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX1_HUMAN
θ value	6.87365e-08 (rank : 17)	NC score	0.576079 (rank : 20)
Query Neighborhood Hits	303	Target Neighborhood Hits	101	Shared Neighborhood Hits	77
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

PKNX1_MOUSE
θ value	6.87365e-08 (rank : 18)	NC score	0.579556 (rank : 19)
Query Neighborhood Hits	303	Target Neighborhood Hits	103	Shared Neighborhood Hits	79
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

TGIF2_HUMAN
θ value	1.99992e-07 (rank : 19)	NC score	0.615181 (rank : 17)
Query Neighborhood Hits	303	Target Neighborhood Hits	94	Shared Neighborhood Hits	67
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF2_MOUSE
θ value	1.99992e-07 (rank : 20)	NC score	0.611829 (rank : 18)
Query Neighborhood Hits	303	Target Neighborhood Hits	127	Shared Neighborhood Hits	71
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TF2LX_HUMAN
θ value	3.41135e-07 (rank : 21)	NC score	0.625394 (rank : 14)
Query Neighborhood Hits	303	Target Neighborhood Hits	108	Shared Neighborhood Hits	71
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

MEIS2_HUMAN
θ value	5.81887e-07 (rank : 22)	NC score	0.526167 (rank : 28)
Query Neighborhood Hits	303	Target Neighborhood Hits	182	Shared Neighborhood Hits	82
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
θ value	5.81887e-07 (rank : 23)	NC score	0.524130 (rank : 29)
Query Neighborhood Hits	303	Target Neighborhood Hits	208	Shared Neighborhood Hits	84
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS3_HUMAN
θ value	5.81887e-07 (rank : 24)	NC score	0.545443 (rank : 23)
Query Neighborhood Hits	303	Target Neighborhood Hits	118	Shared Neighborhood Hits	73
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS1_HUMAN
θ value	7.59969e-07 (rank : 25)	NC score	0.534472 (rank : 26)
Query Neighborhood Hits	303	Target Neighborhood Hits	115	Shared Neighborhood Hits	76
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS1_MOUSE
θ value	7.59969e-07 (rank : 26)	NC score	0.534474 (rank : 25)
Query Neighborhood Hits	303	Target Neighborhood Hits	115	Shared Neighborhood Hits	76
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS3_MOUSE
θ value	7.59969e-07 (rank : 27)	NC score	0.542317 (rank : 24)
Query Neighborhood Hits	303	Target Neighborhood Hits	118	Shared Neighborhood Hits	71
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

TF2LY_HUMAN
θ value	9.92553e-07 (rank : 28)	NC score	0.622938 (rank : 15)
Query Neighborhood Hits	303	Target Neighborhood Hits	90	Shared Neighborhood Hits	64
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

HXA7_MOUSE
θ value	4.92598e-06 (rank : 29)	NC score	0.340797 (rank : 50)
Query Neighborhood Hits	303	Target Neighborhood Hits	318	Shared Neighborhood Hits	195
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

PBX3_HUMAN
θ value	3.19293e-05 (rank : 30)	NC score	0.511392 (rank : 33)
Query Neighborhood Hits	303	Target Neighborhood Hits	306	Shared Neighborhood Hits	205
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_MOUSE
θ value	3.19293e-05 (rank : 31)	NC score	0.511431 (rank : 32)
Query Neighborhood Hits	303	Target Neighborhood Hits	306	Shared Neighborhood Hits	205
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX1_HUMAN
θ value	4.1701e-05 (rank : 32)	NC score	0.500859 (rank : 34)
Query Neighborhood Hits	303	Target Neighborhood Hits	317	Shared Neighborhood Hits	199
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
θ value	4.1701e-05 (rank : 33)	NC score	0.500859 (rank : 35)
Query Neighborhood Hits	303	Target Neighborhood Hits	317	Shared Neighborhood Hits	199
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PBX2_HUMAN
θ value	4.1701e-05 (rank : 34)	NC score	0.513295 (rank : 31)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	203
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX2_MOUSE
θ value	4.1701e-05 (rank : 35)	NC score	0.513582 (rank : 30)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	203
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

SIX4_MOUSE
θ value	4.1701e-05 (rank : 36)	NC score	0.445315 (rank : 38)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	198
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

MUC1_HUMAN
θ value	5.44631e-05 (rank : 37)	NC score	0.055851 (rank : 360)
Query Neighborhood Hits	303	Target Neighborhood Hits	975	Shared Neighborhood Hits	54
SwissProt Accessions	P15941, P13931, P15942, P17626, Q14128, Q14876, Q16437, Q16442, Q16615, Q9BXA4, Q9UE75, Q9UE76, Q9UQL1, Q9Y4J2	Gene names	MUC1
Domain Architecture
Description	Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut- reactive urinary mucin) (PUM) (Breast carcinoma-associated antigen DF3) (CD227 antigen).

PBX4_MOUSE
θ value	7.1131e-05 (rank : 38)	NC score	0.527431 (rank : 27)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	202
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

HXA7_HUMAN
θ value	0.000158464 (rank : 39)	NC score	0.322296 (rank : 57)
Query Neighborhood Hits	303	Target Neighborhood Hits	309	Shared Neighborhood Hits	193
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

MY18A_MOUSE
θ value	0.000158464 (rank : 40)	NC score	0.019679 (rank : 403)
Query Neighborhood Hits	303	Target Neighborhood Hits	1989	Shared Neighborhood Hits	23
SwissProt Accessions	Q9JMH9, Q811D7	Gene names	Myo18a, Myspdz
Domain Architecture
Description	Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain) (Molecule associated with JAK3 N-terminus) (MAJN).

SIX5_HUMAN
θ value	0.000158464 (rank : 41)	NC score	0.434602 (rank : 41)
Query Neighborhood Hits	303	Target Neighborhood Hits	386	Shared Neighborhood Hits	185
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX4_HUMAN
θ value	0.000270298 (rank : 42)	NC score	0.434329 (rank : 42)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	196
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX2_HUMAN
θ value	0.00035302 (rank : 43)	NC score	0.449291 (rank : 37)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	200
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX2_MOUSE
θ value	0.00035302 (rank : 44)	NC score	0.453910 (rank : 36)
Query Neighborhood Hits	303	Target Neighborhood Hits	376	Shared Neighborhood Hits	216
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

PITX2_HUMAN
θ value	0.000461057 (rank : 45)	NC score	0.296151 (rank : 70)
Query Neighborhood Hits	303	Target Neighborhood Hits	381	Shared Neighborhood Hits	217
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
θ value	0.000461057 (rank : 46)	NC score	0.294891 (rank : 72)
Query Neighborhood Hits	303	Target Neighborhood Hits	383	Shared Neighborhood Hits	215
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

SIX5_MOUSE
θ value	0.000461057 (rank : 47)	NC score	0.411608 (rank : 43)
Query Neighborhood Hits	303	Target Neighborhood Hits	354	Shared Neighborhood Hits	160
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

HXD8_HUMAN
θ value	0.00102713 (rank : 48)	NC score	0.341910 (rank : 49)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	199
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

SIX1_HUMAN
θ value	0.00102713 (rank : 49)	NC score	0.435608 (rank : 40)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	208
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_MOUSE
θ value	0.00102713 (rank : 50)	NC score	0.436081 (rank : 39)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	208
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

ZHX3_HUMAN
θ value	0.00175202 (rank : 51)	NC score	0.262423 (rank : 156)
Query Neighborhood Hits	303	Target Neighborhood Hits	331	Shared Neighborhood Hits	141
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX3_MOUSE
θ value	0.00175202 (rank : 52)	NC score	0.272722 (rank : 121)
Query Neighborhood Hits	303	Target Neighborhood Hits	321	Shared Neighborhood Hits	145
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

BSH_MOUSE
θ value	0.00228821 (rank : 53)	NC score	0.323860 (rank : 56)
Query Neighborhood Hits	303	Target Neighborhood Hits	349	Shared Neighborhood Hits	204
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

LHX4_MOUSE
θ value	0.00228821 (rank : 54)	NC score	0.182222 (rank : 289)
Query Neighborhood Hits	303	Target Neighborhood Hits	457	Shared Neighborhood Hits	210
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

HXD8_MOUSE
θ value	0.00509761 (rank : 55)	NC score	0.343061 (rank : 48)
Query Neighborhood Hits	303	Target Neighborhood Hits	333	Shared Neighborhood Hits	198
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXC8_HUMAN
θ value	0.00665767 (rank : 56)	NC score	0.332872 (rank : 52)
Query Neighborhood Hits	303	Target Neighborhood Hits	327	Shared Neighborhood Hits	203
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXC8_MOUSE
θ value	0.00665767 (rank : 57)	NC score	0.332823 (rank : 53)
Query Neighborhood Hits	303	Target Neighborhood Hits	327	Shared Neighborhood Hits	203
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXA1_HUMAN
θ value	0.00869519 (rank : 58)	NC score	0.321283 (rank : 59)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	200
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXB8_HUMAN
θ value	0.00869519 (rank : 59)	NC score	0.333797 (rank : 51)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	197
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

HXB8_MOUSE
θ value	0.00869519 (rank : 60)	NC score	0.332711 (rank : 54)
Query Neighborhood Hits	303	Target Neighborhood Hits	325	Shared Neighborhood Hits	198
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

NACAM_MOUSE
θ value	0.00869519 (rank : 61)	NC score	0.062017 (rank : 353)
Query Neighborhood Hits	303	Target Neighborhood Hits	1866	Shared Neighborhood Hits	76
SwissProt Accessions	P70670	Gene names	Naca
Domain Architecture	No domain graphic available
Description	Nascent polypeptide-associated complex subunit alpha, muscle-specific form (Alpha-NAC, muscle-specific form).

HXC4_MOUSE
θ value	0.0113563 (rank : 62)	NC score	0.285219 (rank : 88)
Query Neighborhood Hits	303	Target Neighborhood Hits	365	Shared Neighborhood Hits	201
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

LHX4_HUMAN
θ value	0.0113563 (rank : 63)	NC score	0.181325 (rank : 290)
Query Neighborhood Hits	303	Target Neighborhood Hits	455	Shared Neighborhood Hits	210
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

HXC4_HUMAN
θ value	0.0193708 (rank : 64)	NC score	0.282225 (rank : 97)
Query Neighborhood Hits	303	Target Neighborhood Hits	361	Shared Neighborhood Hits	202
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXB6_HUMAN
θ value	0.0252991 (rank : 65)	NC score	0.312397 (rank : 65)
Query Neighborhood Hits	303	Target Neighborhood Hits	307	Shared Neighborhood Hits	194
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXB6_MOUSE
θ value	0.0252991 (rank : 66)	NC score	0.311752 (rank : 66)
Query Neighborhood Hits	303	Target Neighborhood Hits	309	Shared Neighborhood Hits	194
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

MY18A_HUMAN
θ value	0.0252991 (rank : 67)	NC score	0.016073 (rank : 406)
Query Neighborhood Hits	303	Target Neighborhood Hits	1929	Shared Neighborhood Hits	24
SwissProt Accessions	Q92614, Q8IXP8	Gene names	MYO18A, KIAA0216, MYSPDZ
Domain Architecture
Description	Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain) (Molecule associated with JAK3 N-terminus) (MAJN).

HXA1_MOUSE
θ value	0.0330416 (rank : 68)	NC score	0.320891 (rank : 62)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	203
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

HXA4_MOUSE
θ value	0.0330416 (rank : 69)	NC score	0.295484 (rank : 71)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	204
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

NKX12_MOUSE
θ value	0.0330416 (rank : 70)	NC score	0.298339 (rank : 67)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	194
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

SIX3_HUMAN
θ value	0.0330416 (rank : 71)	NC score	0.377065 (rank : 44)
Query Neighborhood Hits	303	Target Neighborhood Hits	285	Shared Neighborhood Hits	182
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
θ value	0.0330416 (rank : 72)	NC score	0.377011 (rank : 45)
Query Neighborhood Hits	303	Target Neighborhood Hits	289	Shared Neighborhood Hits	182
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

HXA4_HUMAN
θ value	0.0431538 (rank : 73)	NC score	0.290745 (rank : 77)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	201
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

LARP4_MOUSE
θ value	0.0431538 (rank : 74)	NC score	0.067459 (rank : 346)
Query Neighborhood Hits	303	Target Neighborhood Hits	260	Shared Neighborhood Hits	15
SwissProt Accessions	Q8BWW4, Q3UR69	Gene names	Larp4
Domain Architecture	No domain graphic available
Description	La-related protein 4 (La ribonucleoprotein domain family member 4).

LHX3_HUMAN
θ value	0.0431538 (rank : 75)	NC score	0.168047 (rank : 293)
Query Neighborhood Hits	303	Target Neighborhood Hits	474	Shared Neighborhood Hits	217
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

LIMD1_MOUSE
θ value	0.0431538 (rank : 76)	NC score	0.029936 (rank : 385)
Query Neighborhood Hits	303	Target Neighborhood Hits	291	Shared Neighborhood Hits	15
SwissProt Accessions	Q9QXD8, Q8C8G4, Q9CW55	Gene names	Limd1
Domain Architecture
Description	LIM domain-containing protein 1.

NFH_MOUSE
θ value	0.0431538 (rank : 77)	NC score	0.035597 (rank : 376)
Query Neighborhood Hits	303	Target Neighborhood Hits	2247	Shared Neighborhood Hits	71
SwissProt Accessions	P19246, Q5SVF6, Q61959	Gene names	Nefh, Nfh
Domain Architecture
Description	Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).

HXB4_MOUSE
θ value	0.0563607 (rank : 78)	NC score	0.287174 (rank : 87)
Query Neighborhood Hits	303	Target Neighborhood Hits	375	Shared Neighborhood Hits	204
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

SIX6_HUMAN
θ value	0.0563607 (rank : 79)	NC score	0.374112 (rank : 47)
Query Neighborhood Hits	303	Target Neighborhood Hits	269	Shared Neighborhood Hits	168
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

HXB4_HUMAN
θ value	0.0736092 (rank : 80)	NC score	0.288318 (rank : 80)
Query Neighborhood Hits	303	Target Neighborhood Hits	376	Shared Neighborhood Hits	207
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXB7_HUMAN
θ value	0.0736092 (rank : 81)	NC score	0.322021 (rank : 58)
Query Neighborhood Hits	303	Target Neighborhood Hits	311	Shared Neighborhood Hits	194
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

HXB7_MOUSE
θ value	0.0736092 (rank : 82)	NC score	0.330603 (rank : 55)
Query Neighborhood Hits	303	Target Neighborhood Hits	314	Shared Neighborhood Hits	194
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXD4_HUMAN
θ value	0.0736092 (rank : 83)	NC score	0.288313 (rank : 81)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	197
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

HXD4_MOUSE
θ value	0.0736092 (rank : 84)	NC score	0.287317 (rank : 86)
Query Neighborhood Hits	303	Target Neighborhood Hits	339	Shared Neighborhood Hits	192
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

PAX4_HUMAN
θ value	0.0736092 (rank : 85)	NC score	0.244603 (rank : 200)
Query Neighborhood Hits	303	Target Neighborhood Hits	367	Shared Neighborhood Hits	208
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

SIX6_MOUSE
θ value	0.0736092 (rank : 86)	NC score	0.374990 (rank : 46)
Query Neighborhood Hits	303	Target Neighborhood Hits	267	Shared Neighborhood Hits	170
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

ZIMP7_MOUSE
θ value	0.0736092 (rank : 87)	NC score	0.039591 (rank : 370)
Query Neighborhood Hits	303	Target Neighborhood Hits	566	Shared Neighborhood Hits	30
SwissProt Accessions	Q8CIE2, Q6P558, Q6P9Q5, Q8BJ00	Gene names	Zimp7, D11Bwg0280e
Domain Architecture	No domain graphic available
Description	PIAS-like protein Zimp7.

DLX5_MOUSE
θ value	0.0961366 (rank : 88)	NC score	0.291474 (rank : 75)
Query Neighborhood Hits	303	Target Neighborhood Hits	434	Shared Neighborhood Hits	212
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

NKX61_MOUSE
θ value	0.0961366 (rank : 89)	NC score	0.321122 (rank : 61)
Query Neighborhood Hits	303	Target Neighborhood Hits	439	Shared Neighborhood Hits	222
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

DLX1_HUMAN
θ value	0.125558 (rank : 90)	NC score	0.287493 (rank : 85)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	210
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_MOUSE
θ value	0.125558 (rank : 91)	NC score	0.287578 (rank : 84)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	210
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

GSC_HUMAN
θ value	0.125558 (rank : 92)	NC score	0.258573 (rank : 161)
Query Neighborhood Hits	303	Target Neighborhood Hits	369	Shared Neighborhood Hits	208
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

GSC_MOUSE
θ value	0.125558 (rank : 93)	NC score	0.254924 (rank : 169)
Query Neighborhood Hits	303	Target Neighborhood Hits	368	Shared Neighborhood Hits	205
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

NKX61_HUMAN
θ value	0.125558 (rank : 94)	NC score	0.316541 (rank : 64)
Query Neighborhood Hits	303	Target Neighborhood Hits	431	Shared Neighborhood Hits	221
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

PITX1_HUMAN
θ value	0.125558 (rank : 95)	NC score	0.279904 (rank : 103)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	207
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

PITX1_MOUSE
θ value	0.125558 (rank : 96)	NC score	0.282309 (rank : 95)
Query Neighborhood Hits	303	Target Neighborhood Hits	362	Shared Neighborhood Hits	211
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

PSL1_HUMAN
θ value	0.125558 (rank : 97)	NC score	0.037271 (rank : 372)
Query Neighborhood Hits	303	Target Neighborhood Hits	650	Shared Neighborhood Hits	32
SwissProt Accessions	Q8TCT7, O60365, Q567S3, Q8IUH9, Q9BUY6, Q9H3M4, Q9NPN2, Q9P1Z6	Gene names	SPPL2B, KIAA1532, PSL1
Domain Architecture
Description	Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4) (IMP4) (Presenilin-like protein 1).

CIC_HUMAN
θ value	0.163984 (rank : 98)	NC score	0.050670 (rank : 364)
Query Neighborhood Hits	303	Target Neighborhood Hits	992	Shared Neighborhood Hits	58
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

GSHI_MOUSE
θ value	0.163984 (rank : 99)	NC score	0.272159 (rank : 123)
Query Neighborhood Hits	303	Target Neighborhood Hits	313	Shared Neighborhood Hits	194
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

HHEX_HUMAN
θ value	0.163984 (rank : 100)	NC score	0.282284 (rank : 96)
Query Neighborhood Hits	303	Target Neighborhood Hits	358	Shared Neighborhood Hits	193
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HXA6_HUMAN
θ value	0.163984 (rank : 101)	NC score	0.321182 (rank : 60)
Query Neighborhood Hits	303	Target Neighborhood Hits	309	Shared Neighborhood Hits	196
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

HXA6_MOUSE
θ value	0.163984 (rank : 102)	NC score	0.316676 (rank : 63)
Query Neighborhood Hits	303	Target Neighborhood Hits	304	Shared Neighborhood Hits	194
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

HXD1_HUMAN
θ value	0.163984 (rank : 103)	NC score	0.297216 (rank : 69)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	202
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

HXD1_MOUSE
θ value	0.163984 (rank : 104)	NC score	0.298268 (rank : 68)
Query Neighborhood Hits	303	Target Neighborhood Hits	381	Shared Neighborhood Hits	202
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

RGS3_HUMAN
θ value	0.163984 (rank : 105)	NC score	0.028994 (rank : 387)
Query Neighborhood Hits	303	Target Neighborhood Hits	1375	Shared Neighborhood Hits	45
SwissProt Accessions	P49796, Q5VXC1, Q5VZ05, Q6ZRM5, Q8IUQ1, Q8NC47, Q8NFN4, Q8NFN5, Q8TD59, Q8TD68, Q8WXA0	Gene names	RGS3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (RGP3).

DEN1A_HUMAN
θ value	0.21417 (rank : 106)	NC score	0.028632 (rank : 389)
Query Neighborhood Hits	303	Target Neighborhood Hits	176	Shared Neighborhood Hits	16
SwissProt Accessions	Q8TEH3, Q5VWF0, Q8IVD6, Q9H796	Gene names	DENND1A
Domain Architecture	No domain graphic available
Description	DENN domain-containing protein 1A.

HXA3_HUMAN
θ value	0.21417 (rank : 107)	NC score	0.284562 (rank : 91)
Query Neighborhood Hits	303	Target Neighborhood Hits	535	Shared Neighborhood Hits	225
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXA3_MOUSE
θ value	0.21417 (rank : 108)	NC score	0.283207 (rank : 93)
Query Neighborhood Hits	303	Target Neighborhood Hits	558	Shared Neighborhood Hits	228
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

HXB13_HUMAN
θ value	0.21417 (rank : 109)	NC score	0.263747 (rank : 152)
Query Neighborhood Hits	303	Target Neighborhood Hits	377	Shared Neighborhood Hits	210
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

OGFR_HUMAN
θ value	0.21417 (rank : 110)	NC score	0.060050 (rank : 356)
Query Neighborhood Hits	303	Target Neighborhood Hits	1582	Shared Neighborhood Hits	84
SwissProt Accessions	Q9NZT2, O96029, Q4VXW5, Q96CM2, Q9BQW1, Q9H4H0, Q9H7J5, Q9NZT3, Q9NZT4	Gene names	OGFR
Domain Architecture
Description	Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) (7-60 protein).

PAX4_MOUSE
θ value	0.21417 (rank : 111)	NC score	0.239613 (rank : 208)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	207
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

RTEL1_HUMAN
θ value	0.21417 (rank : 112)	NC score	0.029664 (rank : 386)
Query Neighborhood Hits	303	Target Neighborhood Hits	116	Shared Neighborhood Hits	7
SwissProt Accessions	Q9NZ71, Q5JTV4, Q9BW37, Q9H402, Q9H4X6, Q9NX25, Q9NZ73, Q9UPR4, Q9Y4R6	Gene names	RTEL1, C20orf41, KIAA1088, NHL
Domain Architecture
Description	Regulator of telomere elongation helicase 1 (EC 3.6.1.-) (Helicase- like protein NHL).

TITF1_HUMAN
θ value	0.21417 (rank : 113)	NC score	0.276332 (rank : 111)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	200
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

TITF1_MOUSE
θ value	0.21417 (rank : 114)	NC score	0.274541 (rank : 115)
Query Neighborhood Hits	303	Target Neighborhood Hits	335	Shared Neighborhood Hits	200
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

CD45_HUMAN
θ value	0.279714 (rank : 115)	NC score	0.013860 (rank : 409)
Query Neighborhood Hits	303	Target Neighborhood Hits	243	Shared Neighborhood Hits	7
SwissProt Accessions	P08575, Q16614, Q9H0Y6	Gene names	PTPRC, CD45
Domain Architecture
Description	Leukocyte common antigen precursor (EC 3.1.3.48) (L-CA) (CD45 antigen) (T200).

DLX6_HUMAN
θ value	0.279714 (rank : 116)	NC score	0.284234 (rank : 92)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	213
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

EMX1_HUMAN
θ value	0.279714 (rank : 117)	NC score	0.269273 (rank : 136)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	209
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

HXC9_HUMAN
θ value	0.279714 (rank : 118)	NC score	0.279400 (rank : 105)
Query Neighborhood Hits	303	Target Neighborhood Hits	339	Shared Neighborhood Hits	201
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
θ value	0.279714 (rank : 119)	NC score	0.279396 (rank : 106)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	200
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

IPF1_HUMAN
θ value	0.279714 (rank : 120)	NC score	0.284743 (rank : 90)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	197
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

IPF1_MOUSE
θ value	0.279714 (rank : 121)	NC score	0.288152 (rank : 83)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	202
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

PCLO_MOUSE
θ value	0.279714 (rank : 122)	NC score	0.044480 (rank : 366)
Query Neighborhood Hits	303	Target Neighborhood Hits	2275	Shared Neighborhood Hits	82
SwissProt Accessions	Q9QYX7, Q8CF91, Q8CF92, Q9QYX6, Q9QZJ0	Gene names	Pclo, Acz
Domain Architecture
Description	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein) (Brain-derived HLMN protein).

ZHX1_HUMAN
θ value	0.279714 (rank : 123)	NC score	0.198954 (rank : 274)
Query Neighborhood Hits	303	Target Neighborhood Hits	307	Shared Neighborhood Hits	132
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX1_MOUSE
θ value	0.279714 (rank : 124)	NC score	0.198414 (rank : 275)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	134
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ADDB_MOUSE
θ value	0.365318 (rank : 125)	NC score	0.020508 (rank : 401)
Query Neighborhood Hits	303	Target Neighborhood Hits	574	Shared Neighborhood Hits	17
SwissProt Accessions	Q9QYB8, Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE5, Q9QYB7	Gene names	Add2
Domain Architecture
Description	Beta-adducin (Erythrocyte adducin subunit beta) (Add97).

CECR2_HUMAN
θ value	0.365318 (rank : 126)	NC score	0.032958 (rank : 379)
Query Neighborhood Hits	303	Target Neighborhood Hits	543	Shared Neighborhood Hits	19
SwissProt Accessions	Q9BXF3, Q658Z4, Q96P58, Q9C0C3	Gene names	CECR2, KIAA1740
Domain Architecture
Description	Cat eye syndrome critical region protein 2.

GSHI_HUMAN
θ value	0.365318 (rank : 127)	NC score	0.269005 (rank : 137)
Query Neighborhood Hits	303	Target Neighborhood Hits	314	Shared Neighborhood Hits	194
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

ATF2_HUMAN
θ value	0.47712 (rank : 128)	NC score	0.032604 (rank : 381)
Query Neighborhood Hits	303	Target Neighborhood Hits	402	Shared Neighborhood Hits	15
SwissProt Accessions	P15336, Q13000	Gene names	ATF2, CREB2, CREBP1
Domain Architecture
Description	Cyclic AMP-dependent transcription factor ATF-2 (Activating transcription factor 2) (cAMP response element-binding protein CRE- BP1) (HB16).

ATF2_MOUSE
θ value	0.47712 (rank : 129)	NC score	0.032682 (rank : 380)
Query Neighborhood Hits	303	Target Neighborhood Hits	397	Shared Neighborhood Hits	15
SwissProt Accessions	P16951, Q64089, Q64090, Q64091	Gene names	Atf2
Domain Architecture
Description	Cyclic AMP-dependent transcription factor ATF-2 (Activating transcription factor 2) (cAMP response element-binding protein CRE- BP1) (MXBP protein).

DLX5_HUMAN
θ value	0.47712 (rank : 130)	NC score	0.279062 (rank : 109)
Query Neighborhood Hits	303	Target Neighborhood Hits	405	Shared Neighborhood Hits	211
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

EMX2_HUMAN
θ value	0.47712 (rank : 131)	NC score	0.290333 (rank : 78)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	209
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_MOUSE
θ value	0.47712 (rank : 132)	NC score	0.291101 (rank : 76)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	209
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HME2_HUMAN
θ value	0.47712 (rank : 133)	NC score	0.270049 (rank : 132)
Query Neighborhood Hits	303	Target Neighborhood Hits	355	Shared Neighborhood Hits	210
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HME2_MOUSE
θ value	0.47712 (rank : 134)	NC score	0.269634 (rank : 134)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	210
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

NEK4_MOUSE
θ value	0.47712 (rank : 135)	NC score	-0.005482 (rank : 436)
Query Neighborhood Hits	303	Target Neighborhood Hits	899	Shared Neighborhood Hits	7
SwissProt Accessions	Q9Z1J2, O35673, Q9R1J1	Gene names	Nek4, Stk2
Domain Architecture
Description	Serine/threonine-protein kinase Nek4 (EC 2.7.11.1) (NimA-related protein kinase 4) (Serine/threonine-protein kinase 2).

OTP_MOUSE
θ value	0.47712 (rank : 136)	NC score	0.256955 (rank : 164)
Query Neighborhood Hits	303	Target Neighborhood Hits	387	Shared Neighborhood Hits	210
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

SOX13_MOUSE
θ value	0.47712 (rank : 137)	NC score	0.028728 (rank : 388)
Query Neighborhood Hits	303	Target Neighborhood Hits	495	Shared Neighborhood Hits	31
SwissProt Accessions	Q04891, Q922L3	Gene names	Sox13, Sox-13
Domain Architecture
Description	SOX-13 protein.

TLX2_HUMAN
θ value	0.47712 (rank : 138)	NC score	0.268309 (rank : 141)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	200
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

TLX2_MOUSE
θ value	0.47712 (rank : 139)	NC score	0.268813 (rank : 138)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	199
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

HXB1_HUMAN
θ value	0.62314 (rank : 140)	NC score	0.288308 (rank : 82)
Query Neighborhood Hits	303	Target Neighborhood Hits	356	Shared Neighborhood Hits	202
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

HXB5_HUMAN
θ value	0.62314 (rank : 141)	NC score	0.279973 (rank : 102)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	197
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

HXB5_MOUSE
θ value	0.62314 (rank : 142)	NC score	0.280016 (rank : 100)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	199
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXD3_HUMAN
θ value	0.62314 (rank : 143)	NC score	0.272139 (rank : 124)
Query Neighborhood Hits	303	Target Neighborhood Hits	433	Shared Neighborhood Hits	211
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

MINT_MOUSE
θ value	0.62314 (rank : 144)	NC score	0.035378 (rank : 377)
Query Neighborhood Hits	303	Target Neighborhood Hits	1514	Shared Neighborhood Hits	57
SwissProt Accessions	Q62504, Q80TN9, Q99PS4, Q9QZW2	Gene names	Spen, Kiaa0929, Mint, Sharp
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

SNPC4_HUMAN
θ value	0.62314 (rank : 145)	NC score	0.035785 (rank : 374)
Query Neighborhood Hits	303	Target Neighborhood Hits	589	Shared Neighborhood Hits	20
SwissProt Accessions	Q5SXM2, Q9Y6P7	Gene names	SNAPC4, SNAP190
Domain Architecture	No domain graphic available
Description	snRNA-activating protein complex subunit 4 (SNAPc subunit 4) (snRNA- activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor subunit alpha) (PSE-binding factor subunit alpha) (PTF subunit alpha).

ALX3_HUMAN
θ value	0.813845 (rank : 146)	NC score	0.255322 (rank : 167)
Query Neighborhood Hits	303	Target Neighborhood Hits	380	Shared Neighborhood Hits	214
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX3_MOUSE
θ value	0.813845 (rank : 147)	NC score	0.254965 (rank : 168)
Query Neighborhood Hits	303	Target Neighborhood Hits	386	Shared Neighborhood Hits	213
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX4_HUMAN
θ value	0.813845 (rank : 148)	NC score	0.244935 (rank : 198)
Query Neighborhood Hits	303	Target Neighborhood Hits	394	Shared Neighborhood Hits	209
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

FBX46_MOUSE
θ value	0.813845 (rank : 149)	NC score	0.022032 (rank : 396)
Query Neighborhood Hits	303	Target Neighborhood Hits	139	Shared Neighborhood Hits	9
SwissProt Accessions	Q8BG80	Gene names	Fbxo46, Fbx46, Fbxo34l
Domain Architecture	No domain graphic available
Description	F-box only protein 46 (F-box only protein 34-like).

GSH2_HUMAN
θ value	0.813845 (rank : 150)	NC score	0.279384 (rank : 107)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	197
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

HME1_HUMAN
θ value	0.813845 (rank : 151)	NC score	0.263924 (rank : 150)
Query Neighborhood Hits	303	Target Neighborhood Hits	384	Shared Neighborhood Hits	207
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HME1_MOUSE
θ value	0.813845 (rank : 152)	NC score	0.263028 (rank : 155)
Query Neighborhood Hits	303	Target Neighborhood Hits	397	Shared Neighborhood Hits	213
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

HXA13_HUMAN
θ value	0.813845 (rank : 153)	NC score	0.267042 (rank : 144)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	214
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

HXA13_MOUSE
θ value	0.813845 (rank : 154)	NC score	0.268671 (rank : 140)
Query Neighborhood Hits	303	Target Neighborhood Hits	351	Shared Neighborhood Hits	214
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

HXA9_HUMAN
θ value	0.813845 (rank : 155)	NC score	0.275419 (rank : 113)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	204
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA9_MOUSE
θ value	0.813845 (rank : 156)	NC score	0.275714 (rank : 112)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	204
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXB3_HUMAN
θ value	0.813845 (rank : 157)	NC score	0.264418 (rank : 149)
Query Neighborhood Hits	303	Target Neighborhood Hits	559	Shared Neighborhood Hits	207
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HXB3_MOUSE
θ value	0.813845 (rank : 158)	NC score	0.263795 (rank : 151)
Query Neighborhood Hits	303	Target Neighborhood Hits	493	Shared Neighborhood Hits	196
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

HXC6_HUMAN
θ value	0.813845 (rank : 159)	NC score	0.294361 (rank : 73)
Query Neighborhood Hits	303	Target Neighborhood Hits	306	Shared Neighborhood Hits	195
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
θ value	0.813845 (rank : 160)	NC score	0.294361 (rank : 74)
Query Neighborhood Hits	303	Target Neighborhood Hits	306	Shared Neighborhood Hits	195
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

LEO1_MOUSE
θ value	0.813845 (rank : 161)	NC score	0.032103 (rank : 383)
Query Neighborhood Hits	303	Target Neighborhood Hits	946	Shared Neighborhood Hits	27
SwissProt Accessions	Q5XJE5, Q640R1	Gene names	Leo1
Domain Architecture	No domain graphic available
Description	RNA polymerase-associated protein LEO1.

TLX1_MOUSE
θ value	0.813845 (rank : 162)	NC score	0.271064 (rank : 128)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	197
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

TLX3_HUMAN
θ value	0.813845 (rank : 163)	NC score	0.266835 (rank : 145)
Query Neighborhood Hits	303	Target Neighborhood Hits	403	Shared Neighborhood Hits	203
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

TLX3_MOUSE
θ value	0.813845 (rank : 164)	NC score	0.278275 (rank : 110)
Query Neighborhood Hits	303	Target Neighborhood Hits	346	Shared Neighborhood Hits	204
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

ZHX2_HUMAN
θ value	0.813845 (rank : 165)	NC score	0.182483 (rank : 288)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	110
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ZHX2_MOUSE
θ value	0.813845 (rank : 166)	NC score	0.180135 (rank : 291)
Query Neighborhood Hits	303	Target Neighborhood Hits	435	Shared Neighborhood Hits	118
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

BAZ2A_HUMAN
θ value	1.06291 (rank : 167)	NC score	0.020165 (rank : 402)
Query Neighborhood Hits	303	Target Neighborhood Hits	780	Shared Neighborhood Hits	24
SwissProt Accessions	Q9UIF9, O00536, O15030, Q96H26	Gene names	BAZ2A, KIAA0314, TIP5
Domain Architecture
Description	Bromodomain adjacent to zinc finger domain 2A (Transcription termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3).

HXA5_HUMAN
θ value	1.06291 (rank : 168)	NC score	0.280601 (rank : 99)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	196
SwissProt Accessions	P20719, O43367, Q96CY6	Gene names	HOXA5, HOX1C
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1C).

HXA5_MOUSE
θ value	1.06291 (rank : 169)	NC score	0.279974 (rank : 101)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	194
SwissProt Accessions	P09021, Q91VQ5	Gene names	Hoxa5, Hox-1.3, Hoxa-5
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1.3) (M2).

MEF2B_MOUSE
θ value	1.06291 (rank : 170)	NC score	0.025871 (rank : 390)
Query Neighborhood Hits	303	Target Neighborhood Hits	218	Shared Neighborhood Hits	12
SwissProt Accessions	O55087, O55088, O55089, O55090, O55231, Q61843	Gene names	Mef2b
Domain Architecture
Description	Myocyte-specific enhancer factor 2B.

MEOX1_HUMAN
θ value	1.06291 (rank : 171)	NC score	0.246105 (rank : 190)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	196
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

MEOX1_MOUSE
θ value	1.06291 (rank : 172)	NC score	0.251218 (rank : 181)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	199
SwissProt Accessions	P32442	Gene names	Meox1, Mox-1, Mox1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

NKX25_HUMAN
θ value	1.06291 (rank : 173)	NC score	0.266155 (rank : 147)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	205
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX25_MOUSE
θ value	1.06291 (rank : 174)	NC score	0.263477 (rank : 153)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	202
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

PITX3_HUMAN
θ value	1.06291 (rank : 175)	NC score	0.281509 (rank : 98)
Query Neighborhood Hits	303	Target Neighborhood Hits	366	Shared Neighborhood Hits	221
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_MOUSE
θ value	1.06291 (rank : 176)	NC score	0.282768 (rank : 94)
Query Neighborhood Hits	303	Target Neighborhood Hits	380	Shared Neighborhood Hits	222
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PO6F1_HUMAN
θ value	1.06291 (rank : 177)	NC score	0.169162 (rank : 292)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	203
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

PO6F1_MOUSE
θ value	1.06291 (rank : 178)	NC score	0.163934 (rank : 294)
Query Neighborhood Hits	303	Target Neighborhood Hits	581	Shared Neighborhood Hits	207
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

TLX1_HUMAN
θ value	1.06291 (rank : 179)	NC score	0.267833 (rank : 143)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	199
SwissProt Accessions	P31314, O75699, Q9HCA0	Gene names	TLX1, HOX11, TCL3
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (TCL-3 proto-oncogene).

CUTL2_HUMAN
θ value	1.38821 (rank : 180)	NC score	0.117339 (rank : 317)
Query Neighborhood Hits	303	Target Neighborhood Hits	906	Shared Neighborhood Hits	130
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_MOUSE
θ value	1.38821 (rank : 181)	NC score	0.122930 (rank : 311)
Query Neighborhood Hits	303	Target Neighborhood Hits	771	Shared Neighborhood Hits	122
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

DLX2_HUMAN
θ value	1.38821 (rank : 182)	NC score	0.274663 (rank : 114)
Query Neighborhood Hits	303	Target Neighborhood Hits	355	Shared Neighborhood Hits	208
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

DLX2_MOUSE
θ value	1.38821 (rank : 183)	NC score	0.274395 (rank : 116)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	209
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

GSH2_MOUSE
θ value	1.38821 (rank : 184)	NC score	0.279512 (rank : 104)
Query Neighborhood Hits	303	Target Neighborhood Hits	319	Shared Neighborhood Hits	196
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HMX2_MOUSE
θ value	1.38821 (rank : 185)	NC score	0.271152 (rank : 127)
Query Neighborhood Hits	303	Target Neighborhood Hits	354	Shared Neighborhood Hits	205
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

HXB1_MOUSE
θ value	1.38821 (rank : 186)	NC score	0.288555 (rank : 79)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	202
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

HXD3_MOUSE
θ value	1.38821 (rank : 187)	NC score	0.270634 (rank : 131)
Query Neighborhood Hits	303	Target Neighborhood Hits	435	Shared Neighborhood Hits	207
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

HXD9_HUMAN
θ value	1.38821 (rank : 188)	NC score	0.272286 (rank : 122)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	204
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXD9_MOUSE
θ value	1.38821 (rank : 189)	NC score	0.271001 (rank : 129)
Query Neighborhood Hits	303	Target Neighborhood Hits	359	Shared Neighborhood Hits	203
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

LBX1_HUMAN
θ value	1.38821 (rank : 190)	NC score	0.264969 (rank : 148)
Query Neighborhood Hits	303	Target Neighborhood Hits	357	Shared Neighborhood Hits	211
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

LEO1_HUMAN
θ value	1.38821 (rank : 191)	NC score	0.035719 (rank : 375)
Query Neighborhood Hits	303	Target Neighborhood Hits	958	Shared Neighborhood Hits	28
SwissProt Accessions	Q8WVC0, Q96N99	Gene names	LEO1, RDL
Domain Architecture	No domain graphic available
Description	RNA polymerase-associated protein LEO1 (Replicative senescence down- regulated leo1-like protein).

NKX28_HUMAN
θ value	1.38821 (rank : 192)	NC score	0.272030 (rank : 125)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	215
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

SON_HUMAN
θ value	1.38821 (rank : 193)	NC score	0.040704 (rank : 369)
Query Neighborhood Hits	303	Target Neighborhood Hits	1568	Shared Neighborhood Hits	61
SwissProt Accessions	P18583, O14487, O95981, Q14120, Q9H7B1, Q9P070, Q9P072, Q9UKP9, Q9UPY0	Gene names	SON, C21orf50, DBP5, KIAA1019, NREBP
Domain Architecture
Description	SON protein (SON3) (Negative regulatory element-binding protein) (NRE- binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1).

TM108_MOUSE
θ value	1.38821 (rank : 194)	NC score	0.037835 (rank : 371)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	24
SwissProt Accessions	Q8BHE4, Q80WR9	Gene names	Tmem108
Domain Architecture	No domain graphic available
Description	Transmembrane protein 108 precursor.

EGR4_HUMAN
θ value	1.81305 (rank : 195)	NC score	-0.001706 (rank : 431)
Query Neighborhood Hits	303	Target Neighborhood Hits	939	Shared Neighborhood Hits	19
SwissProt Accessions	Q05215	Gene names	EGR4
Domain Architecture
Description	Early growth response protein 4 (EGR-4) (AT133).

HLX1_HUMAN
θ value	1.81305 (rank : 196)	NC score	0.271259 (rank : 126)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	209
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

HXB13_MOUSE
θ value	1.81305 (rank : 197)	NC score	0.254153 (rank : 171)
Query Neighborhood Hits	303	Target Neighborhood Hits	384	Shared Neighborhood Hits	211
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

LRRF1_MOUSE
θ value	1.81305 (rank : 198)	NC score	0.021731 (rank : 397)
Query Neighborhood Hits	303	Target Neighborhood Hits	440	Shared Neighborhood Hits	12
SwissProt Accessions	Q3UZ39, O70323, Q3TS94	Gene names	Lrrfip1, Flap
Domain Architecture	No domain graphic available
Description	Leucine-rich repeat flightless-interacting protein 1 (LRR FLII- interacting protein 1) (FLI-LRR-associated protein 1) (Flap-1) (H186 FLAP).

MLL3_MOUSE
θ value	1.81305 (rank : 199)	NC score	0.021722 (rank : 398)
Query Neighborhood Hits	303	Target Neighborhood Hits	1399	Shared Neighborhood Hits	54
SwissProt Accessions	Q8BRH4, Q5YLV9, Q8BK12, Q8C6M3, Q923H5, Q923H6	Gene names	Mll3
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (EC 2.1.1.43) (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3).

NKX28_MOUSE
θ value	1.81305 (rank : 200)	NC score	0.267943 (rank : 142)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	212
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

SP5_MOUSE
θ value	1.81305 (rank : 201)	NC score	-0.002516 (rank : 432)
Query Neighborhood Hits	303	Target Neighborhood Hits	821	Shared Neighborhood Hits	22
SwissProt Accessions	Q9JHX2	Gene names	Sp5
Domain Architecture
Description	Transcription factor Sp5.

ALX4_MOUSE
θ value	2.36792 (rank : 202)	NC score	0.245713 (rank : 192)
Query Neighborhood Hits	303	Target Neighborhood Hits	369	Shared Neighborhood Hits	215
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

CA104_HUMAN
θ value	2.36792 (rank : 203)	NC score	0.030417 (rank : 384)
Query Neighborhood Hits	303	Target Neighborhood Hits	15	Shared Neighborhood Hits	4
SwissProt Accessions	Q66K80, Q8NA07	Gene names	C1orf104
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C1orf104.

ELOA2_HUMAN
θ value	2.36792 (rank : 204)	NC score	0.021195 (rank : 400)
Query Neighborhood Hits	303	Target Neighborhood Hits	165	Shared Neighborhood Hits	8
SwissProt Accessions	Q8IYF1, Q9P2V9	Gene names	TCEB3B, TCEB3L
Domain Architecture
Description	RNA polymerase II transcription factor SIII subunit A2 (Elongin-A2) (EloA2) (Transcription elongation factor B polypeptide 3B).

HHEX_MOUSE
θ value	2.36792 (rank : 205)	NC score	0.273386 (rank : 118)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	197
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HXC10_HUMAN
θ value	2.36792 (rank : 206)	NC score	0.268754 (rank : 139)
Query Neighborhood Hits	303	Target Neighborhood Hits	417	Shared Neighborhood Hits	212
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HXC10_MOUSE
θ value	2.36792 (rank : 207)	NC score	0.270695 (rank : 130)
Query Neighborhood Hits	303	Target Neighborhood Hits	417	Shared Neighborhood Hits	211
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

MAP1A_HUMAN
θ value	2.36792 (rank : 208)	NC score	0.022653 (rank : 393)
Query Neighborhood Hits	303	Target Neighborhood Hits	1626	Shared Neighborhood Hits	47
SwissProt Accessions	P78559, O95643, Q12973, Q15882, Q9UJT4	Gene names	MAP1A
Domain Architecture
Description	Microtubule-associated protein 1A (MAP 1A) (Proliferation-related protein p80) [Contains: MAP1 light chain LC2].

MNAB_MOUSE
θ value	2.36792 (rank : 209)	NC score	0.011976 (rank : 412)
Query Neighborhood Hits	303	Target Neighborhood Hits	231	Shared Neighborhood Hits	12
SwissProt Accessions	P0C090	Gene names	Mnab
Domain Architecture	No domain graphic available
Description	Membrane-associated nucleic acid-binding protein.

MSX2_MOUSE
θ value	2.36792 (rank : 210)	NC score	0.250212 (rank : 183)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	199
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

MYO15_MOUSE
θ value	2.36792 (rank : 211)	NC score	0.021246 (rank : 399)
Query Neighborhood Hits	303	Target Neighborhood Hits	467	Shared Neighborhood Hits	29
SwissProt Accessions	Q9QZZ4, O70395, Q9QWL6	Gene names	Myo15a, Myo15
Domain Architecture
Description	Myosin-15 (Myosin XV) (Unconventional myosin-15).

NKX31_MOUSE
θ value	2.36792 (rank : 212)	NC score	0.239312 (rank : 209)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	192
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

RTN1_HUMAN
θ value	2.36792 (rank : 213)	NC score	0.022533 (rank : 394)
Query Neighborhood Hits	303	Target Neighborhood Hits	173	Shared Neighborhood Hits	13
SwissProt Accessions	Q16799, Q16800, Q16801	Gene names	RTN1, NSP
Domain Architecture
Description	Reticulon-1 (Neuroendocrine-specific protein).

CRX_HUMAN
θ value	3.0926 (rank : 214)	NC score	0.205957 (rank : 265)
Query Neighborhood Hits	303	Target Neighborhood Hits	360	Shared Neighborhood Hits	202
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

DLX3_HUMAN
θ value	3.0926 (rank : 215)	NC score	0.273104 (rank : 120)
Query Neighborhood Hits	303	Target Neighborhood Hits	369	Shared Neighborhood Hits	209
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX3_MOUSE
θ value	3.0926 (rank : 216)	NC score	0.269722 (rank : 133)
Query Neighborhood Hits	303	Target Neighborhood Hits	367	Shared Neighborhood Hits	209
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

HXA10_HUMAN
θ value	3.0926 (rank : 217)	NC score	0.269538 (rank : 135)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	204
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXA10_MOUSE
θ value	3.0926 (rank : 218)	NC score	0.266604 (rank : 146)
Query Neighborhood Hits	303	Target Neighborhood Hits	365	Shared Neighborhood Hits	204
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

HXB9_HUMAN
θ value	3.0926 (rank : 219)	NC score	0.259954 (rank : 159)
Query Neighborhood Hits	303	Target Neighborhood Hits	344	Shared Neighborhood Hits	197
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HXB9_MOUSE
θ value	3.0926 (rank : 220)	NC score	0.263107 (rank : 154)
Query Neighborhood Hits	303	Target Neighborhood Hits	344	Shared Neighborhood Hits	197
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

LBX1_MOUSE
θ value	3.0926 (rank : 221)	NC score	0.259921 (rank : 160)
Query Neighborhood Hits	303	Target Neighborhood Hits	349	Shared Neighborhood Hits	211
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

LMX1B_HUMAN
θ value	3.0926 (rank : 222)	NC score	0.130806 (rank : 307)
Query Neighborhood Hits	303	Target Neighborhood Hits	404	Shared Neighborhood Hits	184
SwissProt Accessions	O60663, O75463	Gene names	LMX1B
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LMX1B_MOUSE
θ value	3.0926 (rank : 223)	NC score	0.128811 (rank : 308)
Query Neighborhood Hits	303	Target Neighborhood Hits	394	Shared Neighborhood Hits	183
SwissProt Accessions	O88609	Gene names	Lmx1b
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

MSX2_HUMAN
θ value	3.0926 (rank : 224)	NC score	0.252386 (rank : 174)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	201
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

NKX23_MOUSE
θ value	3.0926 (rank : 225)	NC score	0.245232 (rank : 195)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	204
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

NKX26_MOUSE
θ value	3.0926 (rank : 226)	NC score	0.254281 (rank : 170)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	196
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

SAPS1_HUMAN
θ value	3.0926 (rank : 227)	NC score	0.041014 (rank : 368)
Query Neighborhood Hits	303	Target Neighborhood Hits	704	Shared Neighborhood Hits	38
SwissProt Accessions	Q9UPN7, Q504V2, Q6NVJ6, Q9BU97	Gene names	SAPS1, KIAA1115
Domain Architecture
Description	SAPS domain family member 1.

SEM6C_MOUSE
θ value	3.0926 (rank : 228)	NC score	0.007690 (rank : 420)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	20
SwissProt Accessions	Q9WTM3	Gene names	Sema6c, Semay
Domain Architecture
Description	Semaphorin-6C precursor (Semaphorin Y) (Sema Y).

BRAC_HUMAN
θ value	4.03905 (rank : 229)	NC score	0.004658 (rank : 425)
Query Neighborhood Hits	303	Target Neighborhood Hits	68	Shared Neighborhood Hits	4
SwissProt Accessions	O15178	Gene names	T
Domain Architecture
Description	Brachyury protein (T protein).

EPN3_MOUSE
θ value	4.03905 (rank : 230)	NC score	0.017068 (rank : 405)
Query Neighborhood Hits	303	Target Neighborhood Hits	312	Shared Neighborhood Hits	21
SwissProt Accessions	Q91W69, Q9CV55	Gene names	Epn3
Domain Architecture
Description	Epsin-3 (EPS-15-interacting protein 3).

HLXB9_HUMAN
θ value	4.03905 (rank : 231)	NC score	0.284748 (rank : 89)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	201
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

HLXB9_MOUSE
θ value	4.03905 (rank : 232)	NC score	0.279270 (rank : 108)
Query Neighborhood Hits	303	Target Neighborhood Hits	354	Shared Neighborhood Hits	204
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

HXC5_HUMAN
θ value	4.03905 (rank : 233)	NC score	0.273792 (rank : 117)
Query Neighborhood Hits	303	Target Neighborhood Hits	316	Shared Neighborhood Hits	193
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HXC5_MOUSE
θ value	4.03905 (rank : 234)	NC score	0.273275 (rank : 119)
Query Neighborhood Hits	303	Target Neighborhood Hits	316	Shared Neighborhood Hits	192
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

I5P2_HUMAN
θ value	4.03905 (rank : 235)	NC score	0.007514 (rank : 422)
Query Neighborhood Hits	303	Target Neighborhood Hits	86	Shared Neighborhood Hits	3
SwissProt Accessions	P32019, Q5VSG9, Q5VSH0, Q5VSH1, Q658Q5, Q6P6D4, Q6PD53, Q86YE1	Gene names	INPP5B
Domain Architecture	No domain graphic available
Description	Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor (EC 3.1.3.36) (Phosphoinositide 5-phosphatase) (5PTase) (75 kDa inositol polyphosphate-5-phosphatase).

NKX22_HUMAN
θ value	4.03905 (rank : 236)	NC score	0.249701 (rank : 184)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	202
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX22_MOUSE
θ value	4.03905 (rank : 237)	NC score	0.251351 (rank : 179)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	205
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX32_HUMAN
θ value	4.03905 (rank : 238)	NC score	0.252521 (rank : 173)
Query Neighborhood Hits	303	Target Neighborhood Hits	323	Shared Neighborhood Hits	197
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

NKX32_MOUSE
θ value	4.03905 (rank : 239)	NC score	0.252224 (rank : 175)
Query Neighborhood Hits	303	Target Neighborhood Hits	326	Shared Neighborhood Hits	197
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

PHLB1_MOUSE
θ value	4.03905 (rank : 240)	NC score	0.011473 (rank : 414)
Query Neighborhood Hits	303	Target Neighborhood Hits	678	Shared Neighborhood Hits	21
SwissProt Accessions	Q6PDH0, Q80TV2	Gene names	Phldb1, Kiaa0638, Ll5a
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 1 (Protein LL5-alpha).

RGS3_MOUSE
θ value	4.03905 (rank : 241)	NC score	0.036615 (rank : 373)
Query Neighborhood Hits	303	Target Neighborhood Hits	1621	Shared Neighborhood Hits	70
SwissProt Accessions	Q9DC04, Q5SRB1, Q5SRB4, Q5SRB8, Q8CEE3, Q8VI25, Q925G9, Q9JL22, Q9JL23, Q9QXA2	Gene names	Rgs3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (C2PA).

RTP3_MOUSE
θ value	4.03905 (rank : 242)	NC score	0.022748 (rank : 392)
Query Neighborhood Hits	303	Target Neighborhood Hits	374	Shared Neighborhood Hits	19
SwissProt Accessions	Q5QGU6, Q8VDC2	Gene names	Rtp3, Tmem7
Domain Architecture	No domain graphic available
Description	Receptor-transporting protein 3 (Transmembrane protein 7).

SCAP_HUMAN
θ value	4.03905 (rank : 243)	NC score	0.012711 (rank : 410)
Query Neighborhood Hits	303	Target Neighborhood Hits	368	Shared Neighborhood Hits	10
SwissProt Accessions	Q12770, Q8N2E0, Q8WUA1	Gene names	SCAP, KIAA0199
Domain Architecture
Description	Sterol regulatory element-binding protein cleavage-activating protein (SREBP cleavage-activating protein) (SCAP).

TCGAP_HUMAN
θ value	4.03905 (rank : 244)	NC score	0.023261 (rank : 391)
Query Neighborhood Hits	303	Target Neighborhood Hits	872	Shared Neighborhood Hits	46
SwissProt Accessions	O14559, O14552, O14560, Q6ZSP6, Q96CP3, Q9NT23	Gene names	SNX26, TCGAP
Domain Architecture
Description	TC10/CDC42 GTPase-activating protein (Sorting nexin-26).

TSNA1_HUMAN
θ value	4.03905 (rank : 245)	NC score	0.012182 (rank : 411)
Query Neighborhood Hits	303	Target Neighborhood Hits	178	Shared Neighborhood Hits	6
SwissProt Accessions	Q96NA8	Gene names	TSNARE1
Domain Architecture	No domain graphic available
Description	t-SNARE domain-containing protein 1.

WBP4_HUMAN
θ value	4.03905 (rank : 246)	NC score	0.022104 (rank : 395)
Query Neighborhood Hits	303	Target Neighborhood Hits	86	Shared Neighborhood Hits	7
SwissProt Accessions	O75554	Gene names	WBP4, FBP21, FNBP21
Domain Architecture	No domain graphic available
Description	WW domain-binding protein 4 (WBP-4) (Formin-binding protein 21).

BARH2_HUMAN
θ value	5.27518 (rank : 247)	NC score	0.237584 (rank : 215)
Query Neighborhood Hits	303	Target Neighborhood Hits	419	Shared Neighborhood Hits	212
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

BARH2_MOUSE
θ value	5.27518 (rank : 248)	NC score	0.237405 (rank : 216)
Query Neighborhood Hits	303	Target Neighborhood Hits	397	Shared Neighborhood Hits	207
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

DPOLL_MOUSE
θ value	5.27518 (rank : 249)	NC score	0.008389 (rank : 418)
Query Neighborhood Hits	303	Target Neighborhood Hits	71	Shared Neighborhood Hits	4
SwissProt Accessions	Q9QXE2, Q9CTJ1	Gene names	Poll, Polk
Domain Architecture
Description	DNA polymerase lambda (EC 2.7.7.7) (EC 4.2.99.-) (Pol Lambda) (DNA polymerase kappa).

ERBB2_HUMAN
θ value	5.27518 (rank : 250)	NC score	-0.004019 (rank : 434)
Query Neighborhood Hits	303	Target Neighborhood Hits	1073	Shared Neighborhood Hits	15
SwissProt Accessions	P04626, Q14256, Q6LDV1, Q9UMK4	Gene names	ERBB2, HER2, NEU, NGL
Domain Architecture
Description	Receptor tyrosine-protein kinase erbB-2 precursor (EC 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) (Tyrosine kinase-type cell surface receptor HER2) (MLN 19).

HXD11_HUMAN
θ value	5.27518 (rank : 251)	NC score	0.254074 (rank : 172)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	205
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

HXD11_MOUSE
θ value	5.27518 (rank : 252)	NC score	0.256014 (rank : 165)
Query Neighborhood Hits	303	Target Neighborhood Hits	376	Shared Neighborhood Hits	209
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

IRF3_HUMAN
θ value	5.27518 (rank : 253)	NC score	0.007050 (rank : 423)
Query Neighborhood Hits	303	Target Neighborhood Hits	129	Shared Neighborhood Hits	5
SwissProt Accessions	Q14653	Gene names	IRF3
Domain Architecture
Description	Interferon regulatory factor 3 (IRF-3).

K1958_HUMAN
θ value	5.27518 (rank : 254)	NC score	0.015038 (rank : 408)
Query Neighborhood Hits	303	Target Neighborhood Hits	76	Shared Neighborhood Hits	7
SwissProt Accessions	Q8N8K9, Q5T252, Q8TF43, Q96N02	Gene names	KIAA1958
Domain Architecture	No domain graphic available
Description	Protein KIAA1958.

NKX24_HUMAN
θ value	5.27518 (rank : 255)	NC score	0.251809 (rank : 177)
Query Neighborhood Hits	303	Target Neighborhood Hits	366	Shared Neighborhood Hits	203
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX24_MOUSE
θ value	5.27518 (rank : 256)	NC score	0.249560 (rank : 185)
Query Neighborhood Hits	303	Target Neighborhood Hits	356	Shared Neighborhood Hits	201
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

PLCG1_HUMAN
θ value	5.27518 (rank : 257)	NC score	0.003865 (rank : 428)
Query Neighborhood Hits	303	Target Neighborhood Hits	293	Shared Neighborhood Hits	3
SwissProt Accessions	P19174, Q2V575	Gene names	PLCG1, PLC1
Domain Architecture
Description	1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148).

SO4A1_HUMAN
θ value	5.27518 (rank : 258)	NC score	0.004176 (rank : 427)
Query Neighborhood Hits	303	Target Neighborhood Hits	54	Shared Neighborhood Hits	2
SwissProt Accessions	Q96BD0, Q9H4T7, Q9H4T8, Q9H8P2, Q9NWX8, Q9UI35, Q9UIG7	Gene names	SLCO4A1, OATP1, OATPE, SLC21A12
Domain Architecture
Description	Solute carrier organic anion transporter family member 4A1 (Solute carrier family 21 member 12) (Sodium-independent organic anion transporter E) (Organic anion-transporting polypeptide E) (OATP-E) (Colon organic anion transporter) (Organic anion transporter polypeptide-related protein 1) (OATP-RP1) (OATPRP1) (POAT).

CEL_HUMAN
θ value	6.88961 (rank : 259)	NC score	0.015596 (rank : 407)
Query Neighborhood Hits	303	Target Neighborhood Hits	896	Shared Neighborhood Hits	41
SwissProt Accessions	P19835, Q16398	Gene names	CEL, BAL
Domain Architecture
Description	Bile salt-activated lipase precursor (EC 3.1.1.3) (EC 3.1.1.13) (BAL) (Bile salt-stimulated lipase) (BSSL) (Carboxyl ester lipase) (Sterol esterase) (Cholesterol esterase) (Pancreatic lysophospholipase).

CHX10_HUMAN
θ value	6.88961 (rank : 260)	NC score	0.200099 (rank : 273)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	191
SwissProt Accessions	P58304	Gene names	CHX10, VSX2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

CHX10_MOUSE
θ value	6.88961 (rank : 261)	NC score	0.200167 (rank : 272)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	191
SwissProt Accessions	Q61412	Gene names	Chx10, Vsx2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

DBX1_MOUSE
θ value	6.88961 (rank : 262)	NC score	0.249359 (rank : 186)
Query Neighborhood Hits	303	Target Neighborhood Hits	346	Shared Neighborhood Hits	201
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

HSF1_MOUSE
θ value	6.88961 (rank : 263)	NC score	0.011540 (rank : 413)
Query Neighborhood Hits	303	Target Neighborhood Hits	267	Shared Neighborhood Hits	15
SwissProt Accessions	P38532, O70462	Gene names	Hsf1
Domain Architecture
Description	Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1).

K1543_HUMAN
θ value	6.88961 (rank : 264)	NC score	0.042310 (rank : 367)
Query Neighborhood Hits	303	Target Neighborhood Hits	435	Shared Neighborhood Hits	31
SwissProt Accessions	Q9P1Y5, Q8NDF1	Gene names	KIAA1543
Domain Architecture	No domain graphic available
Description	Protein KIAA1543.

LPP_HUMAN
θ value	6.88961 (rank : 265)	NC score	0.033375 (rank : 378)
Query Neighborhood Hits	303	Target Neighborhood Hits	775	Shared Neighborhood Hits	42
SwissProt Accessions	Q93052, Q8NFX5	Gene names	LPP
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma).

MSX1_HUMAN
θ value	6.88961 (rank : 266)	NC score	0.252048 (rank : 176)
Query Neighborhood Hits	303	Target Neighborhood Hits	374	Shared Neighborhood Hits	200
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

MSX1_MOUSE
θ value	6.88961 (rank : 267)	NC score	0.251344 (rank : 180)
Query Neighborhood Hits	303	Target Neighborhood Hits	322	Shared Neighborhood Hits	197
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

NKX23_HUMAN
θ value	6.88961 (rank : 268)	NC score	0.245328 (rank : 194)
Query Neighborhood Hits	303	Target Neighborhood Hits	346	Shared Neighborhood Hits	209
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

NKX31_HUMAN
θ value	6.88961 (rank : 269)	NC score	0.235091 (rank : 218)
Query Neighborhood Hits	303	Target Neighborhood Hits	331	Shared Neighborhood Hits	193
SwissProt Accessions	Q99801, O15465, Q9H2P4, Q9H2P5, Q9H2P6, Q9H2P7, Q9HBG0	Gene names	NKX3-1, NKX3.1, NKX3A
Domain Architecture
Description	Homeobox protein Nkx-3.1.

PAX7_HUMAN
θ value	6.88961 (rank : 270)	NC score	0.210193 (rank : 257)
Query Neighborhood Hits	303	Target Neighborhood Hits	456	Shared Neighborhood Hits	218
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
θ value	6.88961 (rank : 271)	NC score	0.208397 (rank : 258)
Query Neighborhood Hits	303	Target Neighborhood Hits	422	Shared Neighborhood Hits	217
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PK2L1_HUMAN
θ value	6.88961 (rank : 272)	NC score	0.004644 (rank : 426)
Query Neighborhood Hits	303	Target Neighborhood Hits	132	Shared Neighborhood Hits	3
SwissProt Accessions	Q9P0L9, O75972, Q9UP35, Q9UPA2	Gene names	PKD2L1, PKD2L, PKDL
Domain Architecture
Description	Polycystic kidney disease 2-like 1 protein (Polycystin-L) (Polycystin- 2 homolog).

PO2F2_HUMAN
θ value	6.88961 (rank : 273)	NC score	0.113061 (rank : 322)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	190
SwissProt Accessions	P09086, Q16648, Q9BRS4	Gene names	POU2F2, OCT2, OTF2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PO2F2_MOUSE
θ value	6.88961 (rank : 274)	NC score	0.113076 (rank : 321)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	187
SwissProt Accessions	Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q61995, Q61996, Q64245	Gene names	Pou2f2, Oct2, Otf2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PROP1_HUMAN
θ value	6.88961 (rank : 275)	NC score	0.230915 (rank : 223)
Query Neighborhood Hits	303	Target Neighborhood Hits	354	Shared Neighborhood Hits	210
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PRRX2_HUMAN
θ value	6.88961 (rank : 276)	NC score	0.205302 (rank : 266)
Query Neighborhood Hits	303	Target Neighborhood Hits	348	Shared Neighborhood Hits	200
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

PRRX2_MOUSE
θ value	6.88961 (rank : 277)	NC score	0.206305 (rank : 262)
Query Neighborhood Hits	303	Target Neighborhood Hits	351	Shared Neighborhood Hits	200
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

SP5_HUMAN
θ value	6.88961 (rank : 278)	NC score	-0.003812 (rank : 433)
Query Neighborhood Hits	303	Target Neighborhood Hits	832	Shared Neighborhood Hits	17
SwissProt Accessions	Q6BEB4	Gene names	SP5
Domain Architecture	No domain graphic available
Description	Transcription factor Sp5.

ADNP_HUMAN
θ value	8.99809 (rank : 279)	NC score	0.032193 (rank : 382)
Query Neighborhood Hits	303	Target Neighborhood Hits	265	Shared Neighborhood Hits	26
SwissProt Accessions	Q9H2P0, O94881, Q9UG34	Gene names	ADNP, KIAA0784
Domain Architecture
Description	Activity-dependent neuroprotector (Activity-dependent neuroprotective protein).

ADNP_MOUSE
θ value	8.99809 (rank : 280)	NC score	0.047993 (rank : 365)
Query Neighborhood Hits	303	Target Neighborhood Hits	232	Shared Neighborhood Hits	30
SwissProt Accessions	Q9Z103	Gene names	Adnp
Domain Architecture
Description	Activity-dependent neuroprotector (Activity-dependent neuroprotective protein).

CAC1A_HUMAN
θ value	8.99809 (rank : 281)	NC score	0.001567 (rank : 430)
Query Neighborhood Hits	303	Target Neighborhood Hits	387	Shared Neighborhood Hits	14
SwissProt Accessions	O00555, P78510, P78511, Q16290, Q92690, Q99790, Q99791, Q99792, Q99793	Gene names	CACNA1A, CACH4, CACN3, CACNL1A4
Domain Architecture
Description	Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Voltage- gated calcium channel subunit alpha Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI).

CART1_HUMAN
θ value	8.99809 (rank : 282)	NC score	0.227887 (rank : 228)
Query Neighborhood Hits	303	Target Neighborhood Hits	348	Shared Neighborhood Hits	204
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

CART1_MOUSE
θ value	8.99809 (rank : 283)	NC score	0.227067 (rank : 230)
Query Neighborhood Hits	303	Target Neighborhood Hits	344	Shared Neighborhood Hits	201
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

CMTA1_HUMAN
θ value	8.99809 (rank : 284)	NC score	0.007852 (rank : 419)
Query Neighborhood Hits	303	Target Neighborhood Hits	217	Shared Neighborhood Hits	6
SwissProt Accessions	Q9Y6Y1, Q5VUE1	Gene names	CAMTA1, KIAA0833
Domain Architecture	No domain graphic available
Description	Calmodulin-binding transcription activator 1.

GASP1_HUMAN
θ value	8.99809 (rank : 285)	NC score	0.009828 (rank : 415)
Query Neighborhood Hits	303	Target Neighborhood Hits	82	Shared Neighborhood Hits	6
SwissProt Accessions	Q5JY77, O43168, Q96LA1	Gene names	GPRASP1, GASP, KIAA0443
Domain Architecture	No domain graphic available
Description	G-protein coupled receptor-associated sorting protein 1 (GASP-1).

HXD10_HUMAN
θ value	8.99809 (rank : 286)	NC score	0.261265 (rank : 157)
Query Neighborhood Hits	303	Target Neighborhood Hits	392	Shared Neighborhood Hits	208
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
θ value	8.99809 (rank : 287)	NC score	0.261090 (rank : 158)
Query Neighborhood Hits	303	Target Neighborhood Hits	392	Shared Neighborhood Hits	206
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HXD13_HUMAN
θ value	8.99809 (rank : 288)	NC score	0.246580 (rank : 189)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	207
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
θ value	8.99809 (rank : 289)	NC score	0.246036 (rank : 191)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	206
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

MEOX2_HUMAN
θ value	8.99809 (rank : 290)	NC score	0.244103 (rank : 201)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	194
SwissProt Accessions	P50222, O75263, Q9UPL6	Gene names	MEOX2, GAX, MOX2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox).

MEOX2_MOUSE
θ value	8.99809 (rank : 291)	NC score	0.243840 (rank : 202)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	194
SwissProt Accessions	P32443, Q544T6	Gene names	Meox2, Gax, Mox-2, Mox2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2).

NEST_HUMAN
θ value	8.99809 (rank : 292)	NC score	0.007642 (rank : 421)
Query Neighborhood Hits	303	Target Neighborhood Hits	1305	Shared Neighborhood Hits	27
SwissProt Accessions	P48681, O00552	Gene names	NES
Domain Architecture
Description	Nestin.

PAX6_HUMAN
θ value	8.99809 (rank : 293)	NC score	0.184476 (rank : 285)
Query Neighborhood Hits	303	Target Neighborhood Hits	383	Shared Neighborhood Hits	199
SwissProt Accessions	P26367, Q6N006, Q99413	Gene names	PAX6, AN2
Domain Architecture
Description	Paired box protein Pax-6 (Oculorhombin) (Aniridia type II protein).

PAX6_MOUSE
θ value	8.99809 (rank : 294)	NC score	0.184476 (rank : 286)
Query Neighborhood Hits	303	Target Neighborhood Hits	383	Shared Neighborhood Hits	199
SwissProt Accessions	P63015, P32117, P70601, Q62222, Q64037, Q8CEI5, Q8VDB5, Q921Q8	Gene names	Pax6, Pax-6, Sey
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-6 (Oculorhombin).

PLCG1_MOUSE
θ value	8.99809 (rank : 295)	NC score	0.002933 (rank : 429)
Query Neighborhood Hits	303	Target Neighborhood Hits	314	Shared Neighborhood Hits	3
SwissProt Accessions	Q62077, Q6P1G1	Gene names	Plcg1, Plcg-1
Domain Architecture	No domain graphic available
Description	1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148).

RBNS5_HUMAN
θ value	8.99809 (rank : 296)	NC score	0.006759 (rank : 424)
Query Neighborhood Hits	303	Target Neighborhood Hits	242	Shared Neighborhood Hits	8
SwissProt Accessions	Q9H1K0, Q3KP30, Q59EY8, Q8NAQ1	Gene names	ZFYVE20
Domain Architecture	No domain graphic available
Description	Rabenosyn-5 (FYVE finger-containing Rab5 effector protein rabenosyn-5) (Zinc finger FYVE domain-containing protein 20) (110 kDa protein).

SC24A_MOUSE
θ value	8.99809 (rank : 297)	NC score	0.019041 (rank : 404)
Query Neighborhood Hits	303	Target Neighborhood Hits	394	Shared Neighborhood Hits	26
SwissProt Accessions	Q3U2P1, Q3TQ05, Q3TRG7, Q8BIS0	Gene names	Sec24a
Domain Architecture	No domain graphic available
Description	Protein transport protein Sec24A (SEC24-related protein A).

SMRD1_HUMAN
θ value	8.99809 (rank : 298)	NC score	0.009139 (rank : 416)
Query Neighborhood Hits	303	Target Neighborhood Hits	85	Shared Neighborhood Hits	4
SwissProt Accessions	Q96GM5, Q92924, Q9Y635	Gene names	SMARCD1, BAF60A
Domain Architecture
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 (SWI/SNF complex 60 kDa subunit) (60 kDa BRG-1/Brm-associated factor subunit A) (BRG1-associated factor 60A).

SMRD1_MOUSE
θ value	8.99809 (rank : 299)	NC score	0.009138 (rank : 417)
Query Neighborhood Hits	303	Target Neighborhood Hits	86	Shared Neighborhood Hits	4
SwissProt Accessions	Q61466, P70384, Q8R0I7	Gene names	Smarcd1, Baf60a, D15Kz1
Domain Architecture
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 (SWI/SNF complex 60 kDa subunit) (60 kDa BRG-1/Brm-associated factor subunit A) (BRG1-associated factor 60A) (D15KZ1 protein).

TITIN_HUMAN
θ value	8.99809 (rank : 300)	NC score	-0.004316 (rank : 435)
Query Neighborhood Hits	303	Target Neighborhood Hits	2923	Shared Neighborhood Hits	51
SwissProt Accessions	Q8WZ42, Q10465, Q10466, Q15598, Q2XUS3, Q32Q60, Q4U1Z6, Q6NSG0, Q6PDB1, Q6PJP0, Q7KYM2, Q7KYN4, Q7KYN5, Q7LDM3, Q7Z2X3, Q8TCG8, Q8WZ51, Q8WZ52, Q8WZ53, Q8WZB3, Q92761, Q92762, Q9UD97, Q9UP84, Q9Y6L9	Gene names	TTN
Domain Architecture	No domain graphic available
Description	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS- 40.14).

VSX1_HUMAN
θ value	8.99809 (rank : 301)	NC score	0.198301 (rank : 277)
Query Neighborhood Hits	303	Target Neighborhood Hits	344	Shared Neighborhood Hits	191
SwissProt Accessions	Q9NZR4, Q5TF40, Q5TF41, Q9HCU3, Q9NU27	Gene names	VSX1, RINX
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

ZN394_HUMAN
θ value	8.99809 (rank : 302)	NC score	-0.007356 (rank : 437)
Query Neighborhood Hits	303	Target Neighborhood Hits	752	Shared Neighborhood Hits	8
SwissProt Accessions	Q53GI3, Q6P5X9, Q8TB27, Q9HA37	Gene names	ZNF394
Domain Architecture	No domain graphic available
Description	Zinc finger protein 394.

ZNF16_HUMAN
θ value	8.99809 (rank : 303)	NC score	-0.007812 (rank : 438)
Query Neighborhood Hits	303	Target Neighborhood Hits	771	Shared Neighborhood Hits	11
SwissProt Accessions	P17020, Q96FG0	Gene names	ZNF16, KOX9
Domain Architecture	No domain graphic available
Description	Zinc finger protein 16 (Zinc finger protein KOX9).

ARX_HUMAN
θ value	θ > 10 (rank : 304)	NC score	0.213746 (rank : 251)
Query Neighborhood Hits	303	Target Neighborhood Hits	401	Shared Neighborhood Hits	204
SwissProt Accessions	Q96QS3	Gene names	ARX
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

ARX_MOUSE
θ value	θ > 10 (rank : 305)	NC score	0.211321 (rank : 254)
Query Neighborhood Hits	303	Target Neighborhood Hits	398	Shared Neighborhood Hits	201
SwissProt Accessions	O35085, Q9QYT4	Gene names	Arx
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

ATBF1_HUMAN
θ value	θ > 10 (rank : 306)	NC score	0.122868 (rank : 312)
Query Neighborhood Hits	303	Target Neighborhood Hits	1547	Shared Neighborhood Hits	248
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ATBF1_MOUSE
θ value	θ > 10 (rank : 307)	NC score	0.122739 (rank : 313)
Query Neighborhood Hits	303	Target Neighborhood Hits	1841	Shared Neighborhood Hits	251
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

BARH1_HUMAN
θ value	θ > 10 (rank : 308)	NC score	0.242027 (rank : 204)
Query Neighborhood Hits	303	Target Neighborhood Hits	373	Shared Neighborhood Hits	204
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARH1_MOUSE
θ value	θ > 10 (rank : 309)	NC score	0.235441 (rank : 217)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	202
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

BARX1_HUMAN
θ value	θ > 10 (rank : 310)	NC score	0.230901 (rank : 224)
Query Neighborhood Hits	303	Target Neighborhood Hits	326	Shared Neighborhood Hits	191
SwissProt Accessions	Q9HBU1	Gene names	BARX1
Domain Architecture
Description	Homeobox protein BarH-like 1.

BARX1_MOUSE
θ value	θ > 10 (rank : 311)	NC score	0.230691 (rank : 225)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	191
SwissProt Accessions	Q9ER42, O09066, P70159, Q9ERV2	Gene names	Barx1
Domain Architecture
Description	Homeobox protein BarH-like 1.

BARX2_HUMAN
θ value	θ > 10 (rank : 312)	NC score	0.242573 (rank : 203)
Query Neighborhood Hits	303	Target Neighborhood Hits	387	Shared Neighborhood Hits	202
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

BARX2_MOUSE
θ value	θ > 10 (rank : 313)	NC score	0.241574 (rank : 205)
Query Neighborhood Hits	303	Target Neighborhood Hits	335	Shared Neighborhood Hits	198
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

CDX1_HUMAN
θ value	θ > 10 (rank : 314)	NC score	0.248665 (rank : 187)
Query Neighborhood Hits	303	Target Neighborhood Hits	382	Shared Neighborhood Hits	204
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX1_MOUSE
θ value	θ > 10 (rank : 315)	NC score	0.247997 (rank : 188)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	204
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX2_HUMAN
θ value	θ > 10 (rank : 316)	NC score	0.238685 (rank : 213)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	188
SwissProt Accessions	Q99626, O00503, Q969L8	Gene names	CDX2, CDX3
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3).

CDX2_MOUSE
θ value	θ > 10 (rank : 317)	NC score	0.239097 (rank : 211)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	189
SwissProt Accessions	P43241	Gene names	Cdx2, Cdx-2
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2).

CDX4_HUMAN
θ value	θ > 10 (rank : 318)	NC score	0.240492 (rank : 207)
Query Neighborhood Hits	303	Target Neighborhood Hits	366	Shared Neighborhood Hits	198
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CDX4_MOUSE
θ value	θ > 10 (rank : 319)	NC score	0.241219 (rank : 206)
Query Neighborhood Hits	303	Target Neighborhood Hits	378	Shared Neighborhood Hits	196
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CRX_MOUSE
θ value	θ > 10 (rank : 320)	NC score	0.198075 (rank : 278)
Query Neighborhood Hits	303	Target Neighborhood Hits	359	Shared Neighborhood Hits	198
SwissProt Accessions	O54751	Gene names	Crx
Domain Architecture
Description	Cone-rod homeobox protein.

CUTL1_HUMAN
θ value	θ > 10 (rank : 321)	NC score	0.064356 (rank : 350)
Query Neighborhood Hits	303	Target Neighborhood Hits	1574	Shared Neighborhood Hits	142
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

CUTL1_MOUSE
θ value	θ > 10 (rank : 322)	NC score	0.071796 (rank : 342)
Query Neighborhood Hits	303	Target Neighborhood Hits	1620	Shared Neighborhood Hits	149
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

DLX4_HUMAN
θ value	θ > 10 (rank : 323)	NC score	0.244942 (rank : 197)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	207
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

DLX4_MOUSE
θ value	θ > 10 (rank : 324)	NC score	0.245022 (rank : 196)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	208
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

DUX1_HUMAN
θ value	θ > 10 (rank : 325)	NC score	0.203236 (rank : 267)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	201
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX2_HUMAN
θ value	θ > 10 (rank : 326)	NC score	0.094727 (rank : 328)
Query Neighborhood Hits	303	Target Neighborhood Hits	173	Shared Neighborhood Hits	94
SwissProt Accessions	O75505	Gene names	DUX2
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 2.

DUX3_HUMAN
θ value	θ > 10 (rank : 327)	NC score	0.194304 (rank : 282)
Query Neighborhood Hits	303	Target Neighborhood Hits	312	Shared Neighborhood Hits	199
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

DUX4_HUMAN
θ value	θ > 10 (rank : 328)	NC score	0.201445 (rank : 269)
Query Neighborhood Hits	303	Target Neighborhood Hits	403	Shared Neighborhood Hits	207
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

DUX5_HUMAN
θ value	θ > 10 (rank : 329)	NC score	0.201903 (rank : 268)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	201
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

ESX1L_HUMAN
θ value	θ > 10 (rank : 330)	NC score	0.213721 (rank : 252)
Query Neighborhood Hits	303	Target Neighborhood Hits	498	Shared Neighborhood Hits	210
SwissProt Accessions	Q8N693, Q7Z6K7	Gene names	ESX1L, ESX1R
Domain Architecture
Description	Extraembryonic, spermatogenesis, homeobox 1-like protein.

EVX1_HUMAN
θ value	θ > 10 (rank : 331)	NC score	0.225936 (rank : 233)
Query Neighborhood Hits	303	Target Neighborhood Hits	349	Shared Neighborhood Hits	193
SwissProt Accessions	P49640	Gene names	EVX1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

EVX1_MOUSE
θ value	θ > 10 (rank : 332)	NC score	0.228333 (rank : 227)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	194
SwissProt Accessions	P23683	Gene names	Evx1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

EVX2_HUMAN
θ value	θ > 10 (rank : 333)	NC score	0.222005 (rank : 240)
Query Neighborhood Hits	303	Target Neighborhood Hits	325	Shared Neighborhood Hits	188
SwissProt Accessions	Q03828	Gene names	EVX2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

EVX2_MOUSE
θ value	θ > 10 (rank : 334)	NC score	0.226790 (rank : 231)
Query Neighborhood Hits	303	Target Neighborhood Hits	327	Shared Neighborhood Hits	191
SwissProt Accessions	P49749	Gene names	Evx2, Evx-2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

GBX1_HUMAN
θ value	θ > 10 (rank : 335)	NC score	0.219849 (rank : 246)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	177
SwissProt Accessions	Q14549	Gene names	GBX1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

GBX1_MOUSE
θ value	θ > 10 (rank : 336)	NC score	0.220060 (rank : 245)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	181
SwissProt Accessions	P82976, Q8CGW5	Gene names	Gbx1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

GBX2_HUMAN
θ value	θ > 10 (rank : 337)	NC score	0.220940 (rank : 244)
Query Neighborhood Hits	303	Target Neighborhood Hits	322	Shared Neighborhood Hits	179
SwissProt Accessions	P52951, O43833, Q53RX5, Q9Y5Y1	Gene names	GBX2
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2).

GBX2_MOUSE
θ value	θ > 10 (rank : 338)	NC score	0.221390 (rank : 241)
Query Neighborhood Hits	303	Target Neighborhood Hits	326	Shared Neighborhood Hits	179
SwissProt Accessions	P48031	Gene names	Gbx2, Mmoxa, Stra7
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2) (Homeobox protein STRA7).

GSCL_HUMAN
θ value	θ > 10 (rank : 339)	NC score	0.210576 (rank : 255)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	196
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

GSCL_MOUSE
θ value	θ > 10 (rank : 340)	NC score	0.206407 (rank : 261)
Query Neighborhood Hits	303	Target Neighborhood Hits	339	Shared Neighborhood Hits	197
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

HESX1_HUMAN
θ value	θ > 10 (rank : 341)	NC score	0.210517 (rank : 256)
Query Neighborhood Hits	303	Target Neighborhood Hits	326	Shared Neighborhood Hits	188
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

HESX1_MOUSE
θ value	θ > 10 (rank : 342)	NC score	0.211392 (rank : 253)
Query Neighborhood Hits	303	Target Neighborhood Hits	331	Shared Neighborhood Hits	188
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

HLX1_MOUSE
θ value	θ > 10 (rank : 343)	NC score	0.257269 (rank : 163)
Query Neighborhood Hits	303	Target Neighborhood Hits	362	Shared Neighborhood Hits	205
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

HMBX1_HUMAN
θ value	θ > 10 (rank : 344)	NC score	0.076274 (rank : 331)
Query Neighborhood Hits	303	Target Neighborhood Hits	118	Shared Neighborhood Hits	67
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HMBX1_MOUSE
θ value	θ > 10 (rank : 345)	NC score	0.066335 (rank : 347)
Query Neighborhood Hits	303	Target Neighborhood Hits	117	Shared Neighborhood Hits	68
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HMX3_MOUSE
θ value	θ > 10 (rank : 346)	NC score	0.244619 (rank : 199)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	198
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

HNF6_HUMAN
θ value	θ > 10 (rank : 347)	NC score	0.076289 (rank : 330)
Query Neighborhood Hits	303	Target Neighborhood Hits	127	Shared Neighborhood Hits	54
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HNF6_MOUSE
θ value	θ > 10 (rank : 348)	NC score	0.074368 (rank : 334)
Query Neighborhood Hits	303	Target Neighborhood Hits	124	Shared Neighborhood Hits	55
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HOP_HUMAN
θ value	θ > 10 (rank : 349)	NC score	0.061297 (rank : 354)
Query Neighborhood Hits	303	Target Neighborhood Hits	107	Shared Neighborhood Hits	45
SwissProt Accessions	Q9BPY8, Q8N0V6, Q96CI1	Gene names	HOP, HOD, LAGY, NECC1, OB1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1).

HOP_MOUSE
θ value	θ > 10 (rank : 350)	NC score	0.070915 (rank : 344)
Query Neighborhood Hits	303	Target Neighborhood Hits	102	Shared Neighborhood Hits	47
SwissProt Accessions	Q8R1H0, Q8C1N5, Q8CJ22	Gene names	Hop, Hod, Ob1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Homeobox-only protein) (Odd homeobox protein 1) (mOB1).

HXA11_HUMAN
θ value	θ > 10 (rank : 351)	NC score	0.228560 (rank : 226)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	189
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

HXA11_MOUSE
θ value	θ > 10 (rank : 352)	NC score	0.227586 (rank : 229)
Query Neighborhood Hits	303	Target Neighborhood Hits	327	Shared Neighborhood Hits	188
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

HXA2_HUMAN
θ value	θ > 10 (rank : 353)	NC score	0.251002 (rank : 182)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	191
SwissProt Accessions	O43364	Gene names	HOXA2
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A2.

HXA2_MOUSE
θ value	θ > 10 (rank : 354)	NC score	0.251520 (rank : 178)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	193
SwissProt Accessions	P31245, Q149U3, Q920T8	Gene names	Hoxa2, Hox-1.11, Hoxa-2
Domain Architecture
Description	Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11).

HXB2_HUMAN
θ value	θ > 10 (rank : 355)	NC score	0.255731 (rank : 166)
Query Neighborhood Hits	303	Target Neighborhood Hits	367	Shared Neighborhood Hits	204
SwissProt Accessions	P14652, P10913, P17485	Gene names	HOXB2, HOX2H
Domain Architecture
Description	Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8).

HXB2_MOUSE
θ value	θ > 10 (rank : 356)	NC score	0.257991 (rank : 162)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	192
SwissProt Accessions	P0C1T1	Gene names	Hoxb2, Hox-2.8
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-B2 (Hox-2.8).

HXC11_HUMAN
θ value	θ > 10 (rank : 357)	NC score	0.245363 (rank : 193)
Query Neighborhood Hits	303	Target Neighborhood Hits	349	Shared Neighborhood Hits	199
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

HXC12_HUMAN
θ value	θ > 10 (rank : 358)	NC score	0.223886 (rank : 235)
Query Neighborhood Hits	303	Target Neighborhood Hits	313	Shared Neighborhood Hits	186
SwissProt Accessions	P31275, Q9BXJ6	Gene names	HOXC12, HOX3F
Domain Architecture
Description	Homeobox protein Hox-C12 (Hox-3F).

HXC12_MOUSE
θ value	θ > 10 (rank : 359)	NC score	0.223157 (rank : 238)
Query Neighborhood Hits	303	Target Neighborhood Hits	316	Shared Neighborhood Hits	186
SwissProt Accessions	Q8K5B8	Gene names	Hoxc12, Hox-3.8, Hoxc-12
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C12 (Hox-3.8).

HXC13_HUMAN
θ value	θ > 10 (rank : 360)	NC score	0.239143 (rank : 210)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	207
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
θ value	θ > 10 (rank : 361)	NC score	0.238728 (rank : 212)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	206
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

HXD12_HUMAN
θ value	θ > 10 (rank : 362)	NC score	0.231746 (rank : 221)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	191
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXD12_MOUSE
θ value	θ > 10 (rank : 363)	NC score	0.231036 (rank : 222)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	192
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

ISL1_HUMAN
θ value	θ > 10 (rank : 364)	NC score	0.116393 (rank : 318)
Query Neighborhood Hits	303	Target Neighborhood Hits	421	Shared Neighborhood Hits	188
SwissProt Accessions	P61371, P20663, P47894	Gene names	ISL1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL1_MOUSE
θ value	θ > 10 (rank : 365)	NC score	0.116393 (rank : 319)
Query Neighborhood Hits	303	Target Neighborhood Hits	421	Shared Neighborhood Hits	188
SwissProt Accessions	P61372, P20663, P47894, Q812D8	Gene names	Isl1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL2_HUMAN
θ value	θ > 10 (rank : 366)	NC score	0.119041 (rank : 315)
Query Neighborhood Hits	303	Target Neighborhood Hits	435	Shared Neighborhood Hits	193
SwissProt Accessions	Q96A47	Gene names	ISL2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

ISL2_MOUSE
θ value	θ > 10 (rank : 367)	NC score	0.119764 (rank : 314)
Query Neighborhood Hits	303	Target Neighborhood Hits	426	Shared Neighborhood Hits	190
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

LHX1_HUMAN
θ value	θ > 10 (rank : 368)	NC score	0.134139 (rank : 305)
Query Neighborhood Hits	303	Target Neighborhood Hits	453	Shared Neighborhood Hits	206
SwissProt Accessions	P48742, Q3MIW0	Gene names	LHX1, LIM1
Domain Architecture
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX1_MOUSE
θ value	θ > 10 (rank : 369)	NC score	0.134402 (rank : 304)
Query Neighborhood Hits	303	Target Neighborhood Hits	453	Shared Neighborhood Hits	205
SwissProt Accessions	P63006, P36199	Gene names	Lhx1, Lim-1, Lim1
Domain Architecture	No domain graphic available
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX2_HUMAN
θ value	θ > 10 (rank : 370)	NC score	0.140635 (rank : 299)
Query Neighborhood Hits	303	Target Neighborhood Hits	432	Shared Neighborhood Hits	206
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

LHX2_MOUSE
θ value	θ > 10 (rank : 371)	NC score	0.140841 (rank : 298)
Query Neighborhood Hits	303	Target Neighborhood Hits	431	Shared Neighborhood Hits	206
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

LHX3_MOUSE
θ value	θ > 10 (rank : 372)	NC score	0.143821 (rank : 297)
Query Neighborhood Hits	303	Target Neighborhood Hits	451	Shared Neighborhood Hits	208
SwissProt Accessions	P50481, Q61800, Q61801	Gene names	Lhx3, Lim-3, Lim3, Plim
Domain Architecture
Description	LIM/homeobox protein Lhx3 (Homeobox protein LIM-3) (Homeobox protein P-LIM) (LIM homeobox protein 3).

LHX5_HUMAN
θ value	θ > 10 (rank : 373)	NC score	0.137871 (rank : 300)
Query Neighborhood Hits	303	Target Neighborhood Hits	453	Shared Neighborhood Hits	205
SwissProt Accessions	Q9H2C1	Gene names	LHX5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX5_MOUSE
θ value	θ > 10 (rank : 374)	NC score	0.137152 (rank : 302)
Query Neighborhood Hits	303	Target Neighborhood Hits	456	Shared Neighborhood Hits	207
SwissProt Accessions	P61375, P50459	Gene names	Lhx5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX61_HUMAN
θ value	θ > 10 (rank : 375)	NC score	0.117588 (rank : 316)
Query Neighborhood Hits	303	Target Neighborhood Hits	412	Shared Neighborhood Hits	192
SwissProt Accessions	Q9UPM6, Q5T7S8, Q9NTK3, Q9UPM5	Gene names	LHX6, LHX6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1 (Lhx6).

LHX61_MOUSE
θ value	θ > 10 (rank : 376)	NC score	0.104530 (rank : 327)
Query Neighborhood Hits	303	Target Neighborhood Hits	396	Shared Neighborhood Hits	174
SwissProt Accessions	Q9R1R0, Q9R1R1	Gene names	Lhx6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1.

LHX6_MOUSE
θ value	θ > 10 (rank : 377)	NC score	0.114126 (rank : 320)
Query Neighborhood Hits	303	Target Neighborhood Hits	399	Shared Neighborhood Hits	188
SwissProt Accessions	O88706	Gene names	Lhx6
Domain Architecture
Description	LIM/homeobox protein Lhx6.

LHX8_MOUSE
θ value	θ > 10 (rank : 378)	NC score	0.111421 (rank : 324)
Query Neighborhood Hits	303	Target Neighborhood Hits	406	Shared Neighborhood Hits	184
SwissProt Accessions	O35652, O70163, O88707	Gene names	Lhx8, Lhx7
Domain Architecture
Description	LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3).

LHX9_HUMAN
θ value	θ > 10 (rank : 379)	NC score	0.134644 (rank : 303)
Query Neighborhood Hits	303	Target Neighborhood Hits	444	Shared Neighborhood Hits	203
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX9_MOUSE
θ value	θ > 10 (rank : 380)	NC score	0.133678 (rank : 306)
Query Neighborhood Hits	303	Target Neighborhood Hits	445	Shared Neighborhood Hits	203
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LMX1A_HUMAN
θ value	θ > 10 (rank : 381)	NC score	0.127643 (rank : 309)
Query Neighborhood Hits	303	Target Neighborhood Hits	406	Shared Neighborhood Hits	190
SwissProt Accessions	Q8TE12, Q8TE11	Gene names	LMX1A
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

LMX1A_MOUSE
θ value	θ > 10 (rank : 382)	NC score	0.126651 (rank : 310)
Query Neighborhood Hits	303	Target Neighborhood Hits	405	Shared Neighborhood Hits	189
SwissProt Accessions	Q9JKU8	Gene names	Lmx1a
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

MSX3_MOUSE
θ value	θ > 10 (rank : 383)	NC score	0.237943 (rank : 214)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	193
SwissProt Accessions	P70354, P70246, Q03360, Q80W10	Gene names	Msx3, Msx-3
Domain Architecture
Description	Homeobox protein MSX-3.

MUC7_HUMAN
θ value	θ > 10 (rank : 384)	NC score	0.057118 (rank : 358)
Query Neighborhood Hits	303	Target Neighborhood Hits	538	Shared Neighborhood Hits	46
SwissProt Accessions	Q8TAX7	Gene names	MUC7, MG2
Domain Architecture	No domain graphic available
Description	Mucin-7 precursor (MUC-7) (Salivary mucin-7) (Apo-MG2).

ONEC2_HUMAN
θ value	θ > 10 (rank : 385)	NC score	0.075218 (rank : 333)
Query Neighborhood Hits	303	Target Neighborhood Hits	115	Shared Neighborhood Hits	49
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

ONEC2_MOUSE
θ value	θ > 10 (rank : 386)	NC score	0.074030 (rank : 335)
Query Neighborhood Hits	303	Target Neighborhood Hits	123	Shared Neighborhood Hits	49
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

OTX1_HUMAN
θ value	θ > 10 (rank : 387)	NC score	0.198302 (rank : 276)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	198
SwissProt Accessions	P32242, Q53TG6	Gene names	OTX1
Domain Architecture
Description	Homeobox protein OTX1.

OTX1_MOUSE
θ value	θ > 10 (rank : 388)	NC score	0.195991 (rank : 279)
Query Neighborhood Hits	303	Target Neighborhood Hits	372	Shared Neighborhood Hits	199
SwissProt Accessions	P80205	Gene names	Otx1, Otx-1
Domain Architecture
Description	Homeobox protein OTX1.

OTX2_HUMAN
θ value	θ > 10 (rank : 389)	NC score	0.183232 (rank : 287)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	192
SwissProt Accessions	P32243, Q6GTV3, Q9HAW3, Q9P2R1	Gene names	OTX2
Domain Architecture
Description	Homeobox protein OTX2.

OTX2_MOUSE
θ value	θ > 10 (rank : 390)	NC score	0.184645 (rank : 284)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	195
SwissProt Accessions	P80206	Gene names	Otx2, Otx-2
Domain Architecture
Description	Homeobox protein OTX2.

PAX3_HUMAN
θ value	θ > 10 (rank : 391)	NC score	0.195495 (rank : 280)
Query Neighborhood Hits	303	Target Neighborhood Hits	513	Shared Neighborhood Hits	209
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PAX3_MOUSE
θ value	θ > 10 (rank : 392)	NC score	0.194844 (rank : 281)
Query Neighborhood Hits	303	Target Neighborhood Hits	478	Shared Neighborhood Hits	210
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

PEPP1_HUMAN
θ value	θ > 10 (rank : 393)	NC score	0.216943 (rank : 248)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	197
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

PEPP2_HUMAN
θ value	θ > 10 (rank : 394)	NC score	0.207287 (rank : 259)
Query Neighborhood Hits	303	Target Neighborhood Hits	316	Shared Neighborhood Hits	191
SwissProt Accessions	Q9BQY4, Q9BR00	Gene names	PEPP2, THG1
Domain Architecture
Description	Paired-like homeobox protein PEPP-2 (Testis homeobox gene 1).

PHX2A_HUMAN
θ value	θ > 10 (rank : 395)	NC score	0.223616 (rank : 237)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	196
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

PHX2A_MOUSE
θ value	θ > 10 (rank : 396)	NC score	0.222475 (rank : 239)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	196
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

PHX2B_HUMAN
θ value	θ > 10 (rank : 397)	NC score	0.221269 (rank : 242)
Query Neighborhood Hits	303	Target Neighborhood Hits	407	Shared Neighborhood Hits	201
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
θ value	θ > 10 (rank : 398)	NC score	0.221269 (rank : 243)
Query Neighborhood Hits	303	Target Neighborhood Hits	407	Shared Neighborhood Hits	201
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PIT1_HUMAN
θ value	θ > 10 (rank : 399)	NC score	0.071573 (rank : 343)
Query Neighborhood Hits	303	Target Neighborhood Hits	292	Shared Neighborhood Hits	154
SwissProt Accessions	P28069, O75757, Q15132, Q15133, Q9UEL3	Gene names	POU1F1, GHF1, PIT1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PIT1_MOUSE
θ value	θ > 10 (rank : 400)	NC score	0.076134 (rank : 332)
Query Neighborhood Hits	303	Target Neighborhood Hits	313	Shared Neighborhood Hits	171
SwissProt Accessions	Q00286	Gene names	Pou1f1, Pit-1, Pit1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PO2F1_HUMAN
θ value	θ > 10 (rank : 401)	NC score	0.110642 (rank : 325)
Query Neighborhood Hits	303	Target Neighborhood Hits	426	Shared Neighborhood Hits	198
SwissProt Accessions	P14859, Q5TBT7, Q6PK46, Q8NEU9, Q9BPV1	Gene names	POU2F1, OCT1, OTF1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

PO2F1_MOUSE
θ value	θ > 10 (rank : 402)	NC score	0.090767 (rank : 329)
Query Neighborhood Hits	303	Target Neighborhood Hits	408	Shared Neighborhood Hits	187
SwissProt Accessions	P25425, Q61994, Q63891, Q6Y681, Q7TSD0, Q8BT04, Q8K570, Q99JH0, Q9WTZ4, Q9WTZ5, Q9WTZ6	Gene names	Pou2f1, Oct-1, Otf-1, Otf1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

PO2F3_HUMAN
θ value	θ > 10 (rank : 403)	NC score	0.108554 (rank : 326)
Query Neighborhood Hits	303	Target Neighborhood Hits	319	Shared Neighborhood Hits	185
SwissProt Accessions	Q9UKI9, Q9UKR7, Q9Y504	Gene names	POU2F3, OTF11, PLA1
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein).

PO2F3_MOUSE
θ value	θ > 10 (rank : 404)	NC score	0.111810 (rank : 323)
Query Neighborhood Hits	303	Target Neighborhood Hits	328	Shared Neighborhood Hits	188
SwissProt Accessions	P31362	Gene names	Pou2f3, Epoc1, Oct11, Otf-11, Otf11
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1).

PO3F2_HUMAN
θ value	θ > 10 (rank : 405)	NC score	0.064038 (rank : 351)
Query Neighborhood Hits	303	Target Neighborhood Hits	308	Shared Neighborhood Hits	160
SwissProt Accessions	P20265, Q14960, Q86V54, Q9UJL0	Gene names	POU3F2, BRN2, OCT7, OTF7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F2_MOUSE
θ value	θ > 10 (rank : 406)	NC score	0.064031 (rank : 352)
Query Neighborhood Hits	303	Target Neighborhood Hits	313	Shared Neighborhood Hits	160
SwissProt Accessions	P31360	Gene names	Pou3f2, Brn-2, Brn2, Otf7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F3_HUMAN
θ value	θ > 10 (rank : 407)	NC score	0.066134 (rank : 349)
Query Neighborhood Hits	303	Target Neighborhood Hits	311	Shared Neighborhood Hits	162
SwissProt Accessions	P20264, P78379	Gene names	POU3F3, BRN1, OTF8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F3_MOUSE
θ value	θ > 10 (rank : 408)	NC score	0.066237 (rank : 348)
Query Neighborhood Hits	303	Target Neighborhood Hits	308	Shared Neighborhood Hits	162
SwissProt Accessions	P31361	Gene names	Pou3f3, Brn-1, Brn1, Otf8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO4F1_HUMAN
θ value	θ > 10 (rank : 409)	NC score	0.072077 (rank : 341)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	175
SwissProt Accessions	Q01851, Q14986, Q15318	Gene names	POU4F1, BRN3A, RDC1
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1).

PO4F1_MOUSE
θ value	θ > 10 (rank : 410)	NC score	0.072869 (rank : 340)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	175
SwissProt Accessions	P17208	Gene names	Pou4f1, Brn-3, Brn3, Brn3a
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0).

PO4F2_HUMAN
θ value	θ > 10 (rank : 411)	NC score	0.073624 (rank : 336)
Query Neighborhood Hits	303	Target Neighborhood Hits	310	Shared Neighborhood Hits	171
SwissProt Accessions	Q12837, Q13883, Q14987	Gene names	POU4F2, BRN3B
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B).

PO4F2_MOUSE
θ value	θ > 10 (rank : 412)	NC score	0.073622 (rank : 337)
Query Neighborhood Hits	303	Target Neighborhood Hits	312	Shared Neighborhood Hits	171
SwissProt Accessions	Q63934, Q63954	Gene names	Pou4f2, Brn3b
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2).

PO4F3_HUMAN
θ value	θ > 10 (rank : 413)	NC score	0.073343 (rank : 339)
Query Neighborhood Hits	303	Target Neighborhood Hits	307	Shared Neighborhood Hits	174
SwissProt Accessions	Q15319, O60557	Gene names	POU4F3, BRN3C
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F3_MOUSE
θ value	θ > 10 (rank : 414)	NC score	0.073466 (rank : 338)
Query Neighborhood Hits	303	Target Neighborhood Hits	311	Shared Neighborhood Hits	174
SwissProt Accessions	Q63955	Gene names	Pou4f3, Brn-3c, Brn3c
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO5F1_HUMAN
θ value	θ > 10 (rank : 415)	NC score	0.067464 (rank : 345)
Query Neighborhood Hits	303	Target Neighborhood Hits	321	Shared Neighborhood Hits	165
SwissProt Accessions	Q01860, P31359, Q15167, Q15168, Q16422	Gene names	POU5F1, OCT3, OCT4, OTF3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4).

PO5F1_MOUSE
θ value	θ > 10 (rank : 416)	NC score	0.060718 (rank : 355)
Query Neighborhood Hits	303	Target Neighborhood Hits	305	Shared Neighborhood Hits	152
SwissProt Accessions	P20263, Q63843	Gene names	Pou5f1, Oct-3, Oct-4, Otf-3, Otf3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3).

PO6F2_HUMAN
θ value	θ > 10 (rank : 417)	NC score	0.137194 (rank : 301)
Query Neighborhood Hits	303	Target Neighborhood Hits	618	Shared Neighborhood Hits	199
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

PO6F2_MOUSE
θ value	θ > 10 (rank : 418)	NC score	0.144834 (rank : 296)
Query Neighborhood Hits	303	Target Neighborhood Hits	639	Shared Neighborhood Hits	206
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

PROP1_MOUSE
θ value	θ > 10 (rank : 419)	NC score	0.218695 (rank : 247)
Query Neighborhood Hits	303	Target Neighborhood Hits	361	Shared Neighborhood Hits	208
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PRP1_HUMAN
θ value	θ > 10 (rank : 420)	NC score	0.055972 (rank : 359)
Query Neighborhood Hits	303	Target Neighborhood Hits	385	Shared Neighborhood Hits	38
SwissProt Accessions	P04280, Q08805, Q15186, Q15187, Q15214, Q15215, Q16038	Gene names	PRB1
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 1 precursor (Salivary proline-rich protein) [Contains: Basic peptide IB-6; Peptide P-H].

PRP2_MOUSE
θ value	θ > 10 (rank : 421)	NC score	0.053202 (rank : 362)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	36
SwissProt Accessions	P05142	Gene names	Prh1, Prp
Domain Architecture	No domain graphic available
Description	Proline-rich protein MP-2 precursor.

PRRX1_HUMAN
θ value	θ > 10 (rank : 422)	NC score	0.206961 (rank : 260)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	201
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

PRRX1_MOUSE
θ value	θ > 10 (rank : 423)	NC score	0.206137 (rank : 264)
Query Neighborhood Hits	303	Target Neighborhood Hits	346	Shared Neighborhood Hits	199
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

PRRXL_MOUSE
θ value	θ > 10 (rank : 424)	NC score	0.223648 (rank : 236)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	211
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

RX_HUMAN
θ value	θ > 10 (rank : 425)	NC score	0.216639 (rank : 249)
Query Neighborhood Hits	303	Target Neighborhood Hits	423	Shared Neighborhood Hits	211
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

RX_MOUSE
θ value	θ > 10 (rank : 426)	NC score	0.216348 (rank : 250)
Query Neighborhood Hits	303	Target Neighborhood Hits	429	Shared Neighborhood Hits	207
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

SHOX2_HUMAN
θ value	θ > 10 (rank : 427)	NC score	0.200702 (rank : 270)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	192
SwissProt Accessions	O60902, O60465, O60467, O60903	Gene names	SHOX2, OG12X, SHOT
Domain Architecture
Description	Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X).

SHOX2_MOUSE
θ value	θ > 10 (rank : 428)	NC score	0.200647 (rank : 271)
Query Neighborhood Hits	303	Target Neighborhood Hits	348	Shared Neighborhood Hits	192
SwissProt Accessions	P70390, P70369	Gene names	Shox2, Og12x, Prx3
Domain Architecture
Description	Short stature homeobox protein 2 (Homeobox protein Og12X) (OG-12) (Paired family homeodomain protein Prx3).

SHOX_HUMAN
θ value	θ > 10 (rank : 429)	NC score	0.206277 (rank : 263)
Query Neighborhood Hits	303	Target Neighborhood Hits	363	Shared Neighborhood Hits	196
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

TAF4_HUMAN
θ value	θ > 10 (rank : 430)	NC score	0.058304 (rank : 357)
Query Neighborhood Hits	303	Target Neighborhood Hits	687	Shared Neighborhood Hits	48
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

VAX1_HUMAN
θ value	θ > 10 (rank : 431)	NC score	0.233714 (rank : 219)
Query Neighborhood Hits	303	Target Neighborhood Hits	355	Shared Neighborhood Hits	199
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX1_MOUSE
θ value	θ > 10 (rank : 432)	NC score	0.233476 (rank : 220)
Query Neighborhood Hits	303	Target Neighborhood Hits	351	Shared Neighborhood Hits	197
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX2_HUMAN
θ value	θ > 10 (rank : 433)	NC score	0.226003 (rank : 232)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	194
SwissProt Accessions	Q9UIW0	Gene names	VAX2
Domain Architecture
Description	Ventral anterior homeobox 2.

VAX2_MOUSE
θ value	θ > 10 (rank : 434)	NC score	0.225184 (rank : 234)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	193
SwissProt Accessions	Q9WTP9	Gene names	Vax2, Vex
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 2 (Ventral retina homeodomain protein).

VSX1_MOUSE
θ value	θ > 10 (rank : 435)	NC score	0.188862 (rank : 283)
Query Neighborhood Hits	303	Target Neighborhood Hits	356	Shared Neighborhood Hits	188
SwissProt Accessions	Q91V10	Gene names	Vsx1, Rinx
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

WASIP_HUMAN
θ value	θ > 10 (rank : 436)	NC score	0.052423 (rank : 363)
Query Neighborhood Hits	303	Target Neighborhood Hits	458	Shared Neighborhood Hits	44
SwissProt Accessions	O43516, Q15220, Q6MZU9, Q9BU37, Q9UNP1	Gene names	WASPIP, WIP
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein-interacting protein (WASP-interacting protein) (PRPL-2 protein).

WASIP_MOUSE
θ value	θ > 10 (rank : 437)	NC score	0.053786 (rank : 361)
Query Neighborhood Hits	303	Target Neighborhood Hits	392	Shared Neighborhood Hits	42
SwissProt Accessions	Q8K1I7, Q3U0U8	Gene names	Waspip, Wip
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein-interacting protein (WASP-interacting protein).

ZFHX2_HUMAN
θ value	θ > 10 (rank : 438)	NC score	0.158909 (rank : 295)
Query Neighborhood Hits	303	Target Neighborhood Hits	1178	Shared Neighborhood Hits	215
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

Hits sorted by NC score

IRX3_MOUSE
NC score	0.999962 (rank : 1)	θ value	1.0968e-122 (rank : 1)
Query Neighborhood Hits	303	Target Neighborhood Hits	303	Shared Neighborhood Hits	303
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_HUMAN
NC score	0.982569 (rank : 2)	θ value	2.89973e-107 (rank : 2)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	261
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX1_MOUSE
NC score	0.950687 (rank : 3)	θ value	1.0458e-56 (rank : 3)
Query Neighborhood Hits	303	Target Neighborhood Hits	269	Shared Neighborhood Hits	219
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_HUMAN
NC score	0.946548 (rank : 4)	θ value	1.72781e-51 (rank : 4)
Query Neighborhood Hits	303	Target Neighborhood Hits	285	Shared Neighborhood Hits	221
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX6_HUMAN
NC score	0.923310 (rank : 5)	θ value	2.67802e-36 (rank : 10)
Query Neighborhood Hits	303	Target Neighborhood Hits	262	Shared Neighborhood Hits	216
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX6_MOUSE
NC score	0.920494 (rank : 6)	θ value	9.50281e-42 (rank : 6)
Query Neighborhood Hits	303	Target Neighborhood Hits	256	Shared Neighborhood Hits	206
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX2_MOUSE
NC score	0.916655 (rank : 7)	θ value	2.42216e-37 (rank : 9)
Query Neighborhood Hits	303	Target Neighborhood Hits	264	Shared Neighborhood Hits	209
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX5_HUMAN
NC score	0.914148 (rank : 8)	θ value	2.34062e-40 (rank : 7)
Query Neighborhood Hits	303	Target Neighborhood Hits	362	Shared Neighborhood Hits	213
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

IRX5_MOUSE
NC score	0.914114 (rank : 9)	θ value	2.50074e-42 (rank : 5)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	205
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

IRX4_HUMAN
NC score	0.912875 (rank : 10)	θ value	1.01765e-35 (rank : 12)
Query Neighborhood Hits	303	Target Neighborhood Hits	276	Shared Neighborhood Hits	218
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX2_HUMAN
NC score	0.910549 (rank : 11)	θ value	3.05695e-40 (rank : 8)
Query Neighborhood Hits	303	Target Neighborhood Hits	358	Shared Neighborhood Hits	210
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX4_MOUSE
NC score	0.909476 (rank : 12)	θ value	3.4976e-36 (rank : 11)
Query Neighborhood Hits	303	Target Neighborhood Hits	286	Shared Neighborhood Hits	219
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

TGIF_MOUSE
NC score	0.627853 (rank : 13)	θ value	4.0297e-08 (rank : 14)
Query Neighborhood Hits	303	Target Neighborhood Hits	125	Shared Neighborhood Hits	66
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TF2LX_HUMAN
NC score	0.625394 (rank : 14)	θ value	3.41135e-07 (rank : 21)
Query Neighborhood Hits	303	Target Neighborhood Hits	108	Shared Neighborhood Hits	71
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

TF2LY_HUMAN
NC score	0.622938 (rank : 15)	θ value	9.92553e-07 (rank : 28)
Query Neighborhood Hits	303	Target Neighborhood Hits	90	Shared Neighborhood Hits	64
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

TGIF_HUMAN
NC score	0.619485 (rank : 16)	θ value	4.0297e-08 (rank : 13)
Query Neighborhood Hits	303	Target Neighborhood Hits	109	Shared Neighborhood Hits	64
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF2_HUMAN
NC score	0.615181 (rank : 17)	θ value	1.99992e-07 (rank : 19)
Query Neighborhood Hits	303	Target Neighborhood Hits	94	Shared Neighborhood Hits	67
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF2_MOUSE
NC score	0.611829 (rank : 18)	θ value	1.99992e-07 (rank : 20)
Query Neighborhood Hits	303	Target Neighborhood Hits	127	Shared Neighborhood Hits	71
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

PKNX1_MOUSE
NC score	0.579556 (rank : 19)	θ value	6.87365e-08 (rank : 18)
Query Neighborhood Hits	303	Target Neighborhood Hits	103	Shared Neighborhood Hits	79
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

PKNX1_HUMAN
NC score	0.576079 (rank : 20)	θ value	6.87365e-08 (rank : 17)
Query Neighborhood Hits	303	Target Neighborhood Hits	101	Shared Neighborhood Hits	77
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

PKNX2_HUMAN
NC score	0.569753 (rank : 21)	θ value	5.26297e-08 (rank : 15)
Query Neighborhood Hits	303	Target Neighborhood Hits	133	Shared Neighborhood Hits	84
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_MOUSE
NC score	0.563785 (rank : 22)	θ value	5.26297e-08 (rank : 16)
Query Neighborhood Hits	303	Target Neighborhood Hits	197	Shared Neighborhood Hits	86
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

MEIS3_HUMAN
NC score	0.545443 (rank : 23)	θ value	5.81887e-07 (rank : 24)
Query Neighborhood Hits	303	Target Neighborhood Hits	118	Shared Neighborhood Hits	73
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS3_MOUSE
NC score	0.542317 (rank : 24)	θ value	7.59969e-07 (rank : 27)
Query Neighborhood Hits	303	Target Neighborhood Hits	118	Shared Neighborhood Hits	71
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS1_MOUSE
NC score	0.534474 (rank : 25)	θ value	7.59969e-07 (rank : 26)
Query Neighborhood Hits	303	Target Neighborhood Hits	115	Shared Neighborhood Hits	76
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS1_HUMAN
NC score	0.534472 (rank : 26)	θ value	7.59969e-07 (rank : 25)
Query Neighborhood Hits	303	Target Neighborhood Hits	115	Shared Neighborhood Hits	76
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

PBX4_MOUSE
NC score	0.527431 (rank : 27)	θ value	7.1131e-05 (rank : 38)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	202
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

MEIS2_HUMAN
NC score	0.526167 (rank : 28)	θ value	5.81887e-07 (rank : 22)
Query Neighborhood Hits	303	Target Neighborhood Hits	182	Shared Neighborhood Hits	82
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
NC score	0.524130 (rank : 29)	θ value	5.81887e-07 (rank : 23)
Query Neighborhood Hits	303	Target Neighborhood Hits	208	Shared Neighborhood Hits	84
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

PBX2_MOUSE
NC score	0.513582 (rank : 30)	θ value	4.1701e-05 (rank : 35)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	203
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

PBX2_HUMAN
NC score	0.513295 (rank : 31)	θ value	4.1701e-05 (rank : 34)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	203
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX3_MOUSE
NC score	0.511431 (rank : 32)	θ value	3.19293e-05 (rank : 31)
Query Neighborhood Hits	303	Target Neighborhood Hits	306	Shared Neighborhood Hits	205
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_HUMAN
NC score	0.511392 (rank : 33)	θ value	3.19293e-05 (rank : 30)
Query Neighborhood Hits	303	Target Neighborhood Hits	306	Shared Neighborhood Hits	205
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX1_HUMAN
NC score	0.500859 (rank : 34)	θ value	4.1701e-05 (rank : 32)
Query Neighborhood Hits	303	Target Neighborhood Hits	317	Shared Neighborhood Hits	199
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
NC score	0.500859 (rank : 35)	θ value	4.1701e-05 (rank : 33)
Query Neighborhood Hits	303	Target Neighborhood Hits	317	Shared Neighborhood Hits	199
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

SIX2_MOUSE
NC score	0.453910 (rank : 36)	θ value	0.00035302 (rank : 44)
Query Neighborhood Hits	303	Target Neighborhood Hits	376	Shared Neighborhood Hits	216
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX2_HUMAN
NC score	0.449291 (rank : 37)	θ value	0.00035302 (rank : 43)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	200
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX4_MOUSE
NC score	0.445315 (rank : 38)	θ value	4.1701e-05 (rank : 36)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	198
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

SIX1_MOUSE
NC score	0.436081 (rank : 39)	θ value	0.00102713 (rank : 50)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	208
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_HUMAN
NC score	0.435608 (rank : 40)	θ value	0.00102713 (rank : 49)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	208
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX5_HUMAN
NC score	0.434602 (rank : 41)	θ value	0.000158464 (rank : 41)
Query Neighborhood Hits	303	Target Neighborhood Hits	386	Shared Neighborhood Hits	185
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX4_HUMAN
NC score	0.434329 (rank : 42)	θ value	0.000270298 (rank : 42)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	196
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX5_MOUSE
NC score	0.411608 (rank : 43)	θ value	0.000461057 (rank : 47)
Query Neighborhood Hits	303	Target Neighborhood Hits	354	Shared Neighborhood Hits	160
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

SIX3_HUMAN
NC score	0.377065 (rank : 44)	θ value	0.0330416 (rank : 71)
Query Neighborhood Hits	303	Target Neighborhood Hits	285	Shared Neighborhood Hits	182
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
NC score	0.377011 (rank : 45)	θ value	0.0330416 (rank : 72)
Query Neighborhood Hits	303	Target Neighborhood Hits	289	Shared Neighborhood Hits	182
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX6_MOUSE
NC score	0.374990 (rank : 46)	θ value	0.0736092 (rank : 86)
Query Neighborhood Hits	303	Target Neighborhood Hits	267	Shared Neighborhood Hits	170
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

SIX6_HUMAN
NC score	0.374112 (rank : 47)	θ value	0.0563607 (rank : 79)
Query Neighborhood Hits	303	Target Neighborhood Hits	269	Shared Neighborhood Hits	168
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

HXD8_MOUSE
NC score	0.343061 (rank : 48)	θ value	0.00509761 (rank : 55)
Query Neighborhood Hits	303	Target Neighborhood Hits	333	Shared Neighborhood Hits	198
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXD8_HUMAN
NC score	0.341910 (rank : 49)	θ value	0.00102713 (rank : 48)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	199
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HXA7_MOUSE
NC score	0.340797 (rank : 50)	θ value	4.92598e-06 (rank : 29)
Query Neighborhood Hits	303	Target Neighborhood Hits	318	Shared Neighborhood Hits	195
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXB8_HUMAN
NC score	0.333797 (rank : 51)	θ value	0.00869519 (rank : 59)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	197
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

HXC8_HUMAN
NC score	0.332872 (rank : 52)	θ value	0.00665767 (rank : 56)
Query Neighborhood Hits	303	Target Neighborhood Hits	327	Shared Neighborhood Hits	203
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXC8_MOUSE
NC score	0.332823 (rank : 53)	θ value	0.00665767 (rank : 57)
Query Neighborhood Hits	303	Target Neighborhood Hits	327	Shared Neighborhood Hits	203
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXB8_MOUSE
NC score	0.332711 (rank : 54)	θ value	0.00869519 (rank : 60)
Query Neighborhood Hits	303	Target Neighborhood Hits	325	Shared Neighborhood Hits	198
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

HXB7_MOUSE
NC score	0.330603 (rank : 55)	θ value	0.0736092 (rank : 82)
Query Neighborhood Hits	303	Target Neighborhood Hits	314	Shared Neighborhood Hits	194
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

BSH_MOUSE
NC score	0.323860 (rank : 56)	θ value	0.00228821 (rank : 53)
Query Neighborhood Hits	303	Target Neighborhood Hits	349	Shared Neighborhood Hits	204
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

HXA7_HUMAN
NC score	0.322296 (rank : 57)	θ value	0.000158464 (rank : 39)
Query Neighborhood Hits	303	Target Neighborhood Hits	309	Shared Neighborhood Hits	193
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXB7_HUMAN
NC score	0.322021 (rank : 58)	θ value	0.0736092 (rank : 81)
Query Neighborhood Hits	303	Target Neighborhood Hits	311	Shared Neighborhood Hits	194
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

HXA1_HUMAN
NC score	0.321283 (rank : 59)	θ value	0.00869519 (rank : 58)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	200
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXA6_HUMAN
NC score	0.321182 (rank : 60)	θ value	0.163984 (rank : 101)
Query Neighborhood Hits	303	Target Neighborhood Hits	309	Shared Neighborhood Hits	196
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

NKX61_MOUSE
NC score	0.321122 (rank : 61)	θ value	0.0961366 (rank : 89)
Query Neighborhood Hits	303	Target Neighborhood Hits	439	Shared Neighborhood Hits	222
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

HXA1_MOUSE
NC score	0.320891 (rank : 62)	θ value	0.0330416 (rank : 68)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	203
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

HXA6_MOUSE
NC score	0.316676 (rank : 63)	θ value	0.163984 (rank : 102)
Query Neighborhood Hits	303	Target Neighborhood Hits	304	Shared Neighborhood Hits	194
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

NKX61_HUMAN
NC score	0.316541 (rank : 64)	θ value	0.125558 (rank : 94)
Query Neighborhood Hits	303	Target Neighborhood Hits	431	Shared Neighborhood Hits	221
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

HXB6_HUMAN
NC score	0.312397 (rank : 65)	θ value	0.0252991 (rank : 65)
Query Neighborhood Hits	303	Target Neighborhood Hits	307	Shared Neighborhood Hits	194
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXB6_MOUSE
NC score	0.311752 (rank : 66)	θ value	0.0252991 (rank : 66)
Query Neighborhood Hits	303	Target Neighborhood Hits	309	Shared Neighborhood Hits	194
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

NKX12_MOUSE
NC score	0.298339 (rank : 67)	θ value	0.0330416 (rank : 70)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	194
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

HXD1_MOUSE
NC score	0.298268 (rank : 68)	θ value	0.163984 (rank : 104)
Query Neighborhood Hits	303	Target Neighborhood Hits	381	Shared Neighborhood Hits	202
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

HXD1_HUMAN
NC score	0.297216 (rank : 69)	θ value	0.163984 (rank : 103)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	202
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

PITX2_HUMAN
NC score	0.296151 (rank : 70)	θ value	0.000461057 (rank : 45)
Query Neighborhood Hits	303	Target Neighborhood Hits	381	Shared Neighborhood Hits	217
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

HXA4_MOUSE
NC score	0.295484 (rank : 71)	θ value	0.0330416 (rank : 69)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	204
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

PITX2_MOUSE
NC score	0.294891 (rank : 72)	θ value	0.000461057 (rank : 46)
Query Neighborhood Hits	303	Target Neighborhood Hits	383	Shared Neighborhood Hits	215
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

HXC6_HUMAN
NC score	0.294361 (rank : 73)	θ value	0.813845 (rank : 159)
Query Neighborhood Hits	303	Target Neighborhood Hits	306	Shared Neighborhood Hits	195
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
NC score	0.294361 (rank : 74)	θ value	0.813845 (rank : 160)
Query Neighborhood Hits	303	Target Neighborhood Hits	306	Shared Neighborhood Hits	195
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

DLX5_MOUSE
NC score	0.291474 (rank : 75)	θ value	0.0961366 (rank : 88)
Query Neighborhood Hits	303	Target Neighborhood Hits	434	Shared Neighborhood Hits	212
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

EMX2_MOUSE
NC score	0.291101 (rank : 76)	θ value	0.47712 (rank : 132)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	209
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HXA4_HUMAN
NC score	0.290745 (rank : 77)	θ value	0.0431538 (rank : 73)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	201
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

EMX2_HUMAN
NC score	0.290333 (rank : 78)	θ value	0.47712 (rank : 131)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	209
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HXB1_MOUSE
NC score	0.288555 (rank : 79)	θ value	1.38821 (rank : 186)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	202
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

HXB4_HUMAN
NC score	0.288318 (rank : 80)	θ value	0.0736092 (rank : 80)
Query Neighborhood Hits	303	Target Neighborhood Hits	376	Shared Neighborhood Hits	207
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXD4_HUMAN
NC score	0.288313 (rank : 81)	θ value	0.0736092 (rank : 83)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	197
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

HXB1_HUMAN
NC score	0.288308 (rank : 82)	θ value	0.62314 (rank : 140)
Query Neighborhood Hits	303	Target Neighborhood Hits	356	Shared Neighborhood Hits	202
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

IPF1_MOUSE
NC score	0.288152 (rank : 83)	θ value	0.279714 (rank : 121)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	202
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

DLX1_MOUSE
NC score	0.287578 (rank : 84)	θ value	0.125558 (rank : 91)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	210
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_HUMAN
NC score	0.287493 (rank : 85)	θ value	0.125558 (rank : 90)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	210
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

HXD4_MOUSE
NC score	0.287317 (rank : 86)	θ value	0.0736092 (rank : 84)
Query Neighborhood Hits	303	Target Neighborhood Hits	339	Shared Neighborhood Hits	192
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

HXB4_MOUSE
NC score	0.287174 (rank : 87)	θ value	0.0563607 (rank : 78)
Query Neighborhood Hits	303	Target Neighborhood Hits	375	Shared Neighborhood Hits	204
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

HXC4_MOUSE
NC score	0.285219 (rank : 88)	θ value	0.0113563 (rank : 62)
Query Neighborhood Hits	303	Target Neighborhood Hits	365	Shared Neighborhood Hits	201
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

HLXB9_HUMAN
NC score	0.284748 (rank : 89)	θ value	4.03905 (rank : 231)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	201
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

IPF1_HUMAN
NC score	0.284743 (rank : 90)	θ value	0.279714 (rank : 120)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	197
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

HXA3_HUMAN
NC score	0.284562 (rank : 91)	θ value	0.21417 (rank : 107)
Query Neighborhood Hits	303	Target Neighborhood Hits	535	Shared Neighborhood Hits	225
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

DLX6_HUMAN
NC score	0.284234 (rank : 92)	θ value	0.279714 (rank : 116)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	213
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

HXA3_MOUSE
NC score	0.283207 (rank : 93)	θ value	0.21417 (rank : 108)
Query Neighborhood Hits	303	Target Neighborhood Hits	558	Shared Neighborhood Hits	228
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

PITX3_MOUSE
NC score	0.282768 (rank : 94)	θ value	1.06291 (rank : 176)
Query Neighborhood Hits	303	Target Neighborhood Hits	380	Shared Neighborhood Hits	222
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX1_MOUSE
NC score	0.282309 (rank : 95)	θ value	0.125558 (rank : 96)
Query Neighborhood Hits	303	Target Neighborhood Hits	362	Shared Neighborhood Hits	211
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

HHEX_HUMAN
NC score	0.282284 (rank : 96)	θ value	0.163984 (rank : 100)
Query Neighborhood Hits	303	Target Neighborhood Hits	358	Shared Neighborhood Hits	193
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HXC4_HUMAN
NC score	0.282225 (rank : 97)	θ value	0.0193708 (rank : 64)
Query Neighborhood Hits	303	Target Neighborhood Hits	361	Shared Neighborhood Hits	202
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

PITX3_HUMAN
NC score	0.281509 (rank : 98)	θ value	1.06291 (rank : 175)
Query Neighborhood Hits	303	Target Neighborhood Hits	366	Shared Neighborhood Hits	221
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

HXA5_HUMAN
NC score	0.280601 (rank : 99)	θ value	1.06291 (rank : 168)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	196
SwissProt Accessions	P20719, O43367, Q96CY6	Gene names	HOXA5, HOX1C
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1C).

HXB5_MOUSE
NC score	0.280016 (rank : 100)	θ value	0.62314 (rank : 142)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	199
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXA5_MOUSE
NC score	0.279974 (rank : 101)	θ value	1.06291 (rank : 169)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	194
SwissProt Accessions	P09021, Q91VQ5	Gene names	Hoxa5, Hox-1.3, Hoxa-5
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1.3) (M2).

HXB5_HUMAN
NC score	0.279973 (rank : 102)	θ value	0.62314 (rank : 141)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	197
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

PITX1_HUMAN
NC score	0.279904 (rank : 103)	θ value	0.125558 (rank : 95)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	207
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

GSH2_MOUSE
NC score	0.279512 (rank : 104)	θ value	1.38821 (rank : 184)
Query Neighborhood Hits	303	Target Neighborhood Hits	319	Shared Neighborhood Hits	196
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HXC9_HUMAN
NC score	0.279400 (rank : 105)	θ value	0.279714 (rank : 118)
Query Neighborhood Hits	303	Target Neighborhood Hits	339	Shared Neighborhood Hits	201
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
NC score	0.279396 (rank : 106)	θ value	0.279714 (rank : 119)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	200
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

GSH2_HUMAN
NC score	0.279384 (rank : 107)	θ value	0.813845 (rank : 150)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	197
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

HLXB9_MOUSE
NC score	0.279270 (rank : 108)	θ value	4.03905 (rank : 232)
Query Neighborhood Hits	303	Target Neighborhood Hits	354	Shared Neighborhood Hits	204
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

DLX5_HUMAN
NC score	0.279062 (rank : 109)	θ value	0.47712 (rank : 130)
Query Neighborhood Hits	303	Target Neighborhood Hits	405	Shared Neighborhood Hits	211
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

TLX3_MOUSE
NC score	0.278275 (rank : 110)	θ value	0.813845 (rank : 164)
Query Neighborhood Hits	303	Target Neighborhood Hits	346	Shared Neighborhood Hits	204
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

TITF1_HUMAN
NC score	0.276332 (rank : 111)	θ value	0.21417 (rank : 113)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	200
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

HXA9_MOUSE
NC score	0.275714 (rank : 112)	θ value	0.813845 (rank : 156)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	204
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXA9_HUMAN
NC score	0.275419 (rank : 113)	θ value	0.813845 (rank : 155)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	204
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

DLX2_HUMAN
NC score	0.274663 (rank : 114)	θ value	1.38821 (rank : 182)
Query Neighborhood Hits	303	Target Neighborhood Hits	355	Shared Neighborhood Hits	208
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

TITF1_MOUSE
NC score	0.274541 (rank : 115)	θ value	0.21417 (rank : 114)
Query Neighborhood Hits	303	Target Neighborhood Hits	335	Shared Neighborhood Hits	200
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

DLX2_MOUSE
NC score	0.274395 (rank : 116)	θ value	1.38821 (rank : 183)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	209
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

HXC5_HUMAN
NC score	0.273792 (rank : 117)	θ value	4.03905 (rank : 233)
Query Neighborhood Hits	303	Target Neighborhood Hits	316	Shared Neighborhood Hits	193
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HHEX_MOUSE
NC score	0.273386 (rank : 118)	θ value	2.36792 (rank : 205)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	197
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HXC5_MOUSE
NC score	0.273275 (rank : 119)	θ value	4.03905 (rank : 234)
Query Neighborhood Hits	303	Target Neighborhood Hits	316	Shared Neighborhood Hits	192
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

DLX3_HUMAN
NC score	0.273104 (rank : 120)	θ value	3.0926 (rank : 215)
Query Neighborhood Hits	303	Target Neighborhood Hits	369	Shared Neighborhood Hits	209
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

ZHX3_MOUSE
NC score	0.272722 (rank : 121)	θ value	0.00175202 (rank : 52)
Query Neighborhood Hits	303	Target Neighborhood Hits	321	Shared Neighborhood Hits	145
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

HXD9_HUMAN
NC score	0.272286 (rank : 122)	θ value	1.38821 (rank : 188)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	204
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

GSHI_MOUSE
NC score	0.272159 (rank : 123)	θ value	0.163984 (rank : 99)
Query Neighborhood Hits	303	Target Neighborhood Hits	313	Shared Neighborhood Hits	194
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

HXD3_HUMAN
NC score	0.272139 (rank : 124)	θ value	0.62314 (rank : 143)
Query Neighborhood Hits	303	Target Neighborhood Hits	433	Shared Neighborhood Hits	211
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

NKX28_HUMAN
NC score	0.272030 (rank : 125)	θ value	1.38821 (rank : 192)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	215
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

HLX1_HUMAN
NC score	0.271259 (rank : 126)	θ value	1.81305 (rank : 196)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	209
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

HMX2_MOUSE
NC score	0.271152 (rank : 127)	θ value	1.38821 (rank : 185)
Query Neighborhood Hits	303	Target Neighborhood Hits	354	Shared Neighborhood Hits	205
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

TLX1_MOUSE
NC score	0.271064 (rank : 128)	θ value	0.813845 (rank : 162)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	197
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

HXD9_MOUSE
NC score	0.271001 (rank : 129)	θ value	1.38821 (rank : 189)
Query Neighborhood Hits	303	Target Neighborhood Hits	359	Shared Neighborhood Hits	203
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

HXC10_MOUSE
NC score	0.270695 (rank : 130)	θ value	2.36792 (rank : 207)
Query Neighborhood Hits	303	Target Neighborhood Hits	417	Shared Neighborhood Hits	211
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXD3_MOUSE
NC score	0.270634 (rank : 131)	θ value	1.38821 (rank : 187)
Query Neighborhood Hits	303	Target Neighborhood Hits	435	Shared Neighborhood Hits	207
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

HME2_HUMAN
NC score	0.270049 (rank : 132)	θ value	0.47712 (rank : 133)
Query Neighborhood Hits	303	Target Neighborhood Hits	355	Shared Neighborhood Hits	210
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

DLX3_MOUSE
NC score	0.269722 (rank : 133)	θ value	3.0926 (rank : 216)
Query Neighborhood Hits	303	Target Neighborhood Hits	367	Shared Neighborhood Hits	209
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

HME2_MOUSE
NC score	0.269634 (rank : 134)	θ value	0.47712 (rank : 134)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	210
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

HXA10_HUMAN
NC score	0.269538 (rank : 135)	θ value	3.0926 (rank : 217)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	204
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

EMX1_HUMAN
NC score	0.269273 (rank : 136)	θ value	0.279714 (rank : 117)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	209
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

GSHI_HUMAN
NC score	0.269005 (rank : 137)	θ value	0.365318 (rank : 127)
Query Neighborhood Hits	303	Target Neighborhood Hits	314	Shared Neighborhood Hits	194
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

TLX2_MOUSE
NC score	0.268813 (rank : 138)	θ value	0.47712 (rank : 139)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	199
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

HXC10_HUMAN
NC score	0.268754 (rank : 139)	θ value	2.36792 (rank : 206)
Query Neighborhood Hits	303	Target Neighborhood Hits	417	Shared Neighborhood Hits	212
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HXA13_MOUSE
NC score	0.268671 (rank : 140)	θ value	0.813845 (rank : 154)
Query Neighborhood Hits	303	Target Neighborhood Hits	351	Shared Neighborhood Hits	214
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

TLX2_HUMAN
NC score	0.268309 (rank : 141)	θ value	0.47712 (rank : 138)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	200
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

NKX28_MOUSE
NC score	0.267943 (rank : 142)	θ value	1.81305 (rank : 200)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	212
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

TLX1_HUMAN
NC score	0.267833 (rank : 143)	θ value	1.06291 (rank : 179)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	199
SwissProt Accessions	P31314, O75699, Q9HCA0	Gene names	TLX1, HOX11, TCL3
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (TCL-3 proto-oncogene).

HXA13_HUMAN
NC score	0.267042 (rank : 144)	θ value	0.813845 (rank : 153)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	214
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

TLX3_HUMAN
NC score	0.266835 (rank : 145)	θ value	0.813845 (rank : 163)
Query Neighborhood Hits	303	Target Neighborhood Hits	403	Shared Neighborhood Hits	203
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

HXA10_MOUSE
NC score	0.266604 (rank : 146)	θ value	3.0926 (rank : 218)
Query Neighborhood Hits	303	Target Neighborhood Hits	365	Shared Neighborhood Hits	204
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

NKX25_HUMAN
NC score	0.266155 (rank : 147)	θ value	1.06291 (rank : 173)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	205
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

LBX1_HUMAN
NC score	0.264969 (rank : 148)	θ value	1.38821 (rank : 190)
Query Neighborhood Hits	303	Target Neighborhood Hits	357	Shared Neighborhood Hits	211
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

HXB3_HUMAN
NC score	0.264418 (rank : 149)	θ value	0.813845 (rank : 157)
Query Neighborhood Hits	303	Target Neighborhood Hits	559	Shared Neighborhood Hits	207
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HME1_HUMAN
NC score	0.263924 (rank : 150)	θ value	0.813845 (rank : 151)
Query Neighborhood Hits	303	Target Neighborhood Hits	384	Shared Neighborhood Hits	207
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HXB3_MOUSE
NC score	0.263795 (rank : 151)	θ value	0.813845 (rank : 158)
Query Neighborhood Hits	303	Target Neighborhood Hits	493	Shared Neighborhood Hits	196
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

HXB13_HUMAN
NC score	0.263747 (rank : 152)	θ value	0.21417 (rank : 109)
Query Neighborhood Hits	303	Target Neighborhood Hits	377	Shared Neighborhood Hits	210
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

NKX25_MOUSE
NC score	0.263477 (rank : 153)	θ value	1.06291 (rank : 174)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	202
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

HXB9_MOUSE
NC score	0.263107 (rank : 154)	θ value	3.0926 (rank : 220)
Query Neighborhood Hits	303	Target Neighborhood Hits	344	Shared Neighborhood Hits	197
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HME1_MOUSE
NC score	0.263028 (rank : 155)	θ value	0.813845 (rank : 152)
Query Neighborhood Hits	303	Target Neighborhood Hits	397	Shared Neighborhood Hits	213
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

ZHX3_HUMAN
NC score	0.262423 (rank : 156)	θ value	0.00175202 (rank : 51)
Query Neighborhood Hits	303	Target Neighborhood Hits	331	Shared Neighborhood Hits	141
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

HXD10_HUMAN
NC score	0.261265 (rank : 157)	θ value	8.99809 (rank : 286)
Query Neighborhood Hits	303	Target Neighborhood Hits	392	Shared Neighborhood Hits	208
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
NC score	0.261090 (rank : 158)	θ value	8.99809 (rank : 287)
Query Neighborhood Hits	303	Target Neighborhood Hits	392	Shared Neighborhood Hits	206
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HXB9_HUMAN
NC score	0.259954 (rank : 159)	θ value	3.0926 (rank : 219)
Query Neighborhood Hits	303	Target Neighborhood Hits	344	Shared Neighborhood Hits	197
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

LBX1_MOUSE
NC score	0.259921 (rank : 160)	θ value	3.0926 (rank : 221)
Query Neighborhood Hits	303	Target Neighborhood Hits	349	Shared Neighborhood Hits	211
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

GSC_HUMAN
NC score	0.258573 (rank : 161)	θ value	0.125558 (rank : 92)
Query Neighborhood Hits	303	Target Neighborhood Hits	369	Shared Neighborhood Hits	208
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

HXB2_MOUSE
NC score	0.257991 (rank : 162)	θ value	θ > 10 (rank : 356)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	192
SwissProt Accessions	P0C1T1	Gene names	Hoxb2, Hox-2.8
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-B2 (Hox-2.8).

HLX1_MOUSE
NC score	0.257269 (rank : 163)	θ value	θ > 10 (rank : 343)
Query Neighborhood Hits	303	Target Neighborhood Hits	362	Shared Neighborhood Hits	205
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

OTP_MOUSE
NC score	0.256955 (rank : 164)	θ value	0.47712 (rank : 136)
Query Neighborhood Hits	303	Target Neighborhood Hits	387	Shared Neighborhood Hits	210
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

HXD11_MOUSE
NC score	0.256014 (rank : 165)	θ value	5.27518 (rank : 252)
Query Neighborhood Hits	303	Target Neighborhood Hits	376	Shared Neighborhood Hits	209
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HXB2_HUMAN
NC score	0.255731 (rank : 166)	θ value	θ > 10 (rank : 355)
Query Neighborhood Hits	303	Target Neighborhood Hits	367	Shared Neighborhood Hits	204
SwissProt Accessions	P14652, P10913, P17485	Gene names	HOXB2, HOX2H
Domain Architecture
Description	Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8).

ALX3_HUMAN
NC score	0.255322 (rank : 167)	θ value	0.813845 (rank : 146)
Query Neighborhood Hits	303	Target Neighborhood Hits	380	Shared Neighborhood Hits	214
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX3_MOUSE
NC score	0.254965 (rank : 168)	θ value	0.813845 (rank : 147)
Query Neighborhood Hits	303	Target Neighborhood Hits	386	Shared Neighborhood Hits	213
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

GSC_MOUSE
NC score	0.254924 (rank : 169)	θ value	0.125558 (rank : 93)
Query Neighborhood Hits	303	Target Neighborhood Hits	368	Shared Neighborhood Hits	205
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

NKX26_MOUSE
NC score	0.254281 (rank : 170)	θ value	3.0926 (rank : 226)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	196
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

HXB13_MOUSE
NC score	0.254153 (rank : 171)	θ value	1.81305 (rank : 197)
Query Neighborhood Hits	303	Target Neighborhood Hits	384	Shared Neighborhood Hits	211
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXD11_HUMAN
NC score	0.254074 (rank : 172)	θ value	5.27518 (rank : 251)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	205
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

NKX32_HUMAN
NC score	0.252521 (rank : 173)	θ value	4.03905 (rank : 238)
Query Neighborhood Hits	303	Target Neighborhood Hits	323	Shared Neighborhood Hits	197
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

MSX2_HUMAN
NC score	0.252386 (rank : 174)	θ value	3.0926 (rank : 224)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	201
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

NKX32_MOUSE
NC score	0.252224 (rank : 175)	θ value	4.03905 (rank : 239)
Query Neighborhood Hits	303	Target Neighborhood Hits	326	Shared Neighborhood Hits	197
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

MSX1_HUMAN
NC score	0.252048 (rank : 176)	θ value	6.88961 (rank : 266)
Query Neighborhood Hits	303	Target Neighborhood Hits	374	Shared Neighborhood Hits	200
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

NKX24_HUMAN
NC score	0.251809 (rank : 177)	θ value	5.27518 (rank : 255)
Query Neighborhood Hits	303	Target Neighborhood Hits	366	Shared Neighborhood Hits	203
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

HXA2_MOUSE
NC score	0.251520 (rank : 178)	θ value	θ > 10 (rank : 354)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	193
SwissProt Accessions	P31245, Q149U3, Q920T8	Gene names	Hoxa2, Hox-1.11, Hoxa-2
Domain Architecture
Description	Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11).

NKX22_MOUSE
NC score	0.251351 (rank : 179)	θ value	4.03905 (rank : 237)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	205
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

MSX1_MOUSE
NC score	0.251344 (rank : 180)	θ value	6.88961 (rank : 267)
Query Neighborhood Hits	303	Target Neighborhood Hits	322	Shared Neighborhood Hits	197
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

MEOX1_MOUSE
NC score	0.251218 (rank : 181)	θ value	1.06291 (rank : 172)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	199
SwissProt Accessions	P32442	Gene names	Meox1, Mox-1, Mox1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

HXA2_HUMAN
NC score	0.251002 (rank : 182)	θ value	θ > 10 (rank : 353)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	191
SwissProt Accessions	O43364	Gene names	HOXA2
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A2.

MSX2_MOUSE
NC score	0.250212 (rank : 183)	θ value	2.36792 (rank : 210)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	199
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

NKX22_HUMAN
NC score	0.249701 (rank : 184)	θ value	4.03905 (rank : 236)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	202
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX24_MOUSE
NC score	0.249560 (rank : 185)	θ value	5.27518 (rank : 256)
Query Neighborhood Hits	303	Target Neighborhood Hits	356	Shared Neighborhood Hits	201
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

DBX1_MOUSE
NC score	0.249359 (rank : 186)	θ value	6.88961 (rank : 262)
Query Neighborhood Hits	303	Target Neighborhood Hits	346	Shared Neighborhood Hits	201
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

CDX1_HUMAN
NC score	0.248665 (rank : 187)	θ value	θ > 10 (rank : 314)
Query Neighborhood Hits	303	Target Neighborhood Hits	382	Shared Neighborhood Hits	204
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX1_MOUSE
NC score	0.247997 (rank : 188)	θ value	θ > 10 (rank : 315)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	204
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

HXD13_HUMAN
NC score	0.246580 (rank : 189)	θ value	8.99809 (rank : 288)
Query Neighborhood Hits	303	Target Neighborhood Hits	332	Shared Neighborhood Hits	207
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

MEOX1_HUMAN
NC score	0.246105 (rank : 190)	θ value	1.06291 (rank : 171)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	196
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

HXD13_MOUSE
NC score	0.246036 (rank : 191)	θ value	8.99809 (rank : 289)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	206
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

ALX4_MOUSE
NC score	0.245713 (rank : 192)	θ value	2.36792 (rank : 202)
Query Neighborhood Hits	303	Target Neighborhood Hits	369	Shared Neighborhood Hits	215
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

HXC11_HUMAN
NC score	0.245363 (rank : 193)	θ value	θ > 10 (rank : 357)
Query Neighborhood Hits	303	Target Neighborhood Hits	349	Shared Neighborhood Hits	199
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

NKX23_HUMAN
NC score	0.245328 (rank : 194)	θ value	6.88961 (rank : 268)
Query Neighborhood Hits	303	Target Neighborhood Hits	346	Shared Neighborhood Hits	209
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

NKX23_MOUSE
NC score	0.245232 (rank : 195)	θ value	3.0926 (rank : 225)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	204
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

DLX4_MOUSE
NC score	0.245022 (rank : 196)	θ value	θ > 10 (rank : 324)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	208
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

DLX4_HUMAN
NC score	0.244942 (rank : 197)	θ value	θ > 10 (rank : 323)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	207
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

ALX4_HUMAN
NC score	0.244935 (rank : 198)	θ value	0.813845 (rank : 148)
Query Neighborhood Hits	303	Target Neighborhood Hits	394	Shared Neighborhood Hits	209
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

HMX3_MOUSE
NC score	0.244619 (rank : 199)	θ value	θ > 10 (rank : 346)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	198
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

PAX4_HUMAN
NC score	0.244603 (rank : 200)	θ value	0.0736092 (rank : 85)
Query Neighborhood Hits	303	Target Neighborhood Hits	367	Shared Neighborhood Hits	208
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

MEOX2_HUMAN
NC score	0.244103 (rank : 201)	θ value	8.99809 (rank : 290)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	194
SwissProt Accessions	P50222, O75263, Q9UPL6	Gene names	MEOX2, GAX, MOX2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox).

MEOX2_MOUSE
NC score	0.243840 (rank : 202)	θ value	8.99809 (rank : 291)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	194
SwissProt Accessions	P32443, Q544T6	Gene names	Meox2, Gax, Mox-2, Mox2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2).

BARX2_HUMAN
NC score	0.242573 (rank : 203)	θ value	θ > 10 (rank : 312)
Query Neighborhood Hits	303	Target Neighborhood Hits	387	Shared Neighborhood Hits	202
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

BARH1_HUMAN
NC score	0.242027 (rank : 204)	θ value	θ > 10 (rank : 308)
Query Neighborhood Hits	303	Target Neighborhood Hits	373	Shared Neighborhood Hits	204
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARX2_MOUSE
NC score	0.241574 (rank : 205)	θ value	θ > 10 (rank : 313)
Query Neighborhood Hits	303	Target Neighborhood Hits	335	Shared Neighborhood Hits	198
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

CDX4_MOUSE
NC score	0.241219 (rank : 206)	θ value	θ > 10 (rank : 319)
Query Neighborhood Hits	303	Target Neighborhood Hits	378	Shared Neighborhood Hits	196
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CDX4_HUMAN
NC score	0.240492 (rank : 207)	θ value	θ > 10 (rank : 318)
Query Neighborhood Hits	303	Target Neighborhood Hits	366	Shared Neighborhood Hits	198
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

PAX4_MOUSE
NC score	0.239613 (rank : 208)	θ value	0.21417 (rank : 111)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	207
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

NKX31_MOUSE
NC score	0.239312 (rank : 209)	θ value	2.36792 (rank : 212)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	192
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

HXC13_HUMAN
NC score	0.239143 (rank : 210)	θ value	θ > 10 (rank : 360)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	207
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

CDX2_MOUSE
NC score	0.239097 (rank : 211)	θ value	θ > 10 (rank : 317)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	189
SwissProt Accessions	P43241	Gene names	Cdx2, Cdx-2
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2).

HXC13_MOUSE
NC score	0.238728 (rank : 212)	θ value	θ > 10 (rank : 361)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	206
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

CDX2_HUMAN
NC score	0.238685 (rank : 213)	θ value	θ > 10 (rank : 316)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	188
SwissProt Accessions	Q99626, O00503, Q969L8	Gene names	CDX2, CDX3
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3).

MSX3_MOUSE
NC score	0.237943 (rank : 214)	θ value	θ > 10 (rank : 383)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	193
SwissProt Accessions	P70354, P70246, Q03360, Q80W10	Gene names	Msx3, Msx-3
Domain Architecture
Description	Homeobox protein MSX-3.

BARH2_HUMAN
NC score	0.237584 (rank : 215)	θ value	5.27518 (rank : 247)
Query Neighborhood Hits	303	Target Neighborhood Hits	419	Shared Neighborhood Hits	212
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

BARH2_MOUSE
NC score	0.237405 (rank : 216)	θ value	5.27518 (rank : 248)
Query Neighborhood Hits	303	Target Neighborhood Hits	397	Shared Neighborhood Hits	207
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

BARH1_MOUSE
NC score	0.235441 (rank : 217)	θ value	θ > 10 (rank : 309)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	202
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

NKX31_HUMAN
NC score	0.235091 (rank : 218)	θ value	6.88961 (rank : 269)
Query Neighborhood Hits	303	Target Neighborhood Hits	331	Shared Neighborhood Hits	193
SwissProt Accessions	Q99801, O15465, Q9H2P4, Q9H2P5, Q9H2P6, Q9H2P7, Q9HBG0	Gene names	NKX3-1, NKX3.1, NKX3A
Domain Architecture
Description	Homeobox protein Nkx-3.1.

VAX1_HUMAN
NC score	0.233714 (rank : 219)	θ value	θ > 10 (rank : 431)
Query Neighborhood Hits	303	Target Neighborhood Hits	355	Shared Neighborhood Hits	199
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX1_MOUSE
NC score	0.233476 (rank : 220)	θ value	θ > 10 (rank : 432)
Query Neighborhood Hits	303	Target Neighborhood Hits	351	Shared Neighborhood Hits	197
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

HXD12_HUMAN
NC score	0.231746 (rank : 221)	θ value	θ > 10 (rank : 362)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	191
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXD12_MOUSE
NC score	0.231036 (rank : 222)	θ value	θ > 10 (rank : 363)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	192
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

PROP1_HUMAN
NC score	0.230915 (rank : 223)	θ value	6.88961 (rank : 275)
Query Neighborhood Hits	303	Target Neighborhood Hits	354	Shared Neighborhood Hits	210
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

BARX1_HUMAN
NC score	0.230901 (rank : 224)	θ value	θ > 10 (rank : 310)
Query Neighborhood Hits	303	Target Neighborhood Hits	326	Shared Neighborhood Hits	191
SwissProt Accessions	Q9HBU1	Gene names	BARX1
Domain Architecture
Description	Homeobox protein BarH-like 1.

BARX1_MOUSE
NC score	0.230691 (rank : 225)	θ value	θ > 10 (rank : 311)
Query Neighborhood Hits	303	Target Neighborhood Hits	324	Shared Neighborhood Hits	191
SwissProt Accessions	Q9ER42, O09066, P70159, Q9ERV2	Gene names	Barx1
Domain Architecture
Description	Homeobox protein BarH-like 1.

HXA11_HUMAN
NC score	0.228560 (rank : 226)	θ value	θ > 10 (rank : 351)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	189
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

EVX1_MOUSE
NC score	0.228333 (rank : 227)	θ value	θ > 10 (rank : 332)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	194
SwissProt Accessions	P23683	Gene names	Evx1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

CART1_HUMAN
NC score	0.227887 (rank : 228)	θ value	8.99809 (rank : 282)
Query Neighborhood Hits	303	Target Neighborhood Hits	348	Shared Neighborhood Hits	204
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

HXA11_MOUSE
NC score	0.227586 (rank : 229)	θ value	θ > 10 (rank : 352)
Query Neighborhood Hits	303	Target Neighborhood Hits	327	Shared Neighborhood Hits	188
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

CART1_MOUSE
NC score	0.227067 (rank : 230)	θ value	8.99809 (rank : 283)
Query Neighborhood Hits	303	Target Neighborhood Hits	344	Shared Neighborhood Hits	201
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

EVX2_MOUSE
NC score	0.226790 (rank : 231)	θ value	θ > 10 (rank : 334)
Query Neighborhood Hits	303	Target Neighborhood Hits	327	Shared Neighborhood Hits	191
SwissProt Accessions	P49749	Gene names	Evx2, Evx-2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

VAX2_HUMAN
NC score	0.226003 (rank : 232)	θ value	θ > 10 (rank : 433)
Query Neighborhood Hits	303	Target Neighborhood Hits	337	Shared Neighborhood Hits	194
SwissProt Accessions	Q9UIW0	Gene names	VAX2
Domain Architecture
Description	Ventral anterior homeobox 2.

EVX1_HUMAN
NC score	0.225936 (rank : 233)	θ value	θ > 10 (rank : 331)
Query Neighborhood Hits	303	Target Neighborhood Hits	349	Shared Neighborhood Hits	193
SwissProt Accessions	P49640	Gene names	EVX1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

VAX2_MOUSE
NC score	0.225184 (rank : 234)	θ value	θ > 10 (rank : 434)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	193
SwissProt Accessions	Q9WTP9	Gene names	Vax2, Vex
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 2 (Ventral retina homeodomain protein).

HXC12_HUMAN
NC score	0.223886 (rank : 235)	θ value	θ > 10 (rank : 358)
Query Neighborhood Hits	303	Target Neighborhood Hits	313	Shared Neighborhood Hits	186
SwissProt Accessions	P31275, Q9BXJ6	Gene names	HOXC12, HOX3F
Domain Architecture
Description	Homeobox protein Hox-C12 (Hox-3F).

PRRXL_MOUSE
NC score	0.223648 (rank : 236)	θ value	θ > 10 (rank : 424)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	211
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

PHX2A_HUMAN
NC score	0.223616 (rank : 237)	θ value	θ > 10 (rank : 395)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	196
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

HXC12_MOUSE
NC score	0.223157 (rank : 238)	θ value	θ > 10 (rank : 359)
Query Neighborhood Hits	303	Target Neighborhood Hits	316	Shared Neighborhood Hits	186
SwissProt Accessions	Q8K5B8	Gene names	Hoxc12, Hox-3.8, Hoxc-12
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C12 (Hox-3.8).

PHX2A_MOUSE
NC score	0.222475 (rank : 239)	θ value	θ > 10 (rank : 396)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	196
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

EVX2_HUMAN
NC score	0.222005 (rank : 240)	θ value	θ > 10 (rank : 333)
Query Neighborhood Hits	303	Target Neighborhood Hits	325	Shared Neighborhood Hits	188
SwissProt Accessions	Q03828	Gene names	EVX2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

GBX2_MOUSE
NC score	0.221390 (rank : 241)	θ value	θ > 10 (rank : 338)
Query Neighborhood Hits	303	Target Neighborhood Hits	326	Shared Neighborhood Hits	179
SwissProt Accessions	P48031	Gene names	Gbx2, Mmoxa, Stra7
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2) (Homeobox protein STRA7).

PHX2B_HUMAN
NC score	0.221269 (rank : 242)	θ value	θ > 10 (rank : 397)
Query Neighborhood Hits	303	Target Neighborhood Hits	407	Shared Neighborhood Hits	201
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
NC score	0.221269 (rank : 243)	θ value	θ > 10 (rank : 398)
Query Neighborhood Hits	303	Target Neighborhood Hits	407	Shared Neighborhood Hits	201
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

GBX2_HUMAN
NC score	0.220940 (rank : 244)	θ value	θ > 10 (rank : 337)
Query Neighborhood Hits	303	Target Neighborhood Hits	322	Shared Neighborhood Hits	179
SwissProt Accessions	P52951, O43833, Q53RX5, Q9Y5Y1	Gene names	GBX2
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2).

GBX1_MOUSE
NC score	0.220060 (rank : 245)	θ value	θ > 10 (rank : 336)
Query Neighborhood Hits	303	Target Neighborhood Hits	350	Shared Neighborhood Hits	181
SwissProt Accessions	P82976, Q8CGW5	Gene names	Gbx1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

GBX1_HUMAN
NC score	0.219849 (rank : 246)	θ value	θ > 10 (rank : 335)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	177
SwissProt Accessions	Q14549	Gene names	GBX1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

PROP1_MOUSE
NC score	0.218695 (rank : 247)	θ value	θ > 10 (rank : 419)
Query Neighborhood Hits	303	Target Neighborhood Hits	361	Shared Neighborhood Hits	208
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PEPP1_HUMAN
NC score	0.216943 (rank : 248)	θ value	θ > 10 (rank : 393)
Query Neighborhood Hits	303	Target Neighborhood Hits	338	Shared Neighborhood Hits	197
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

RX_HUMAN
NC score	0.216639 (rank : 249)	θ value	θ > 10 (rank : 425)
Query Neighborhood Hits	303	Target Neighborhood Hits	423	Shared Neighborhood Hits	211
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

RX_MOUSE
NC score	0.216348 (rank : 250)	θ value	θ > 10 (rank : 426)
Query Neighborhood Hits	303	Target Neighborhood Hits	429	Shared Neighborhood Hits	207
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

ARX_HUMAN
NC score	0.213746 (rank : 251)	θ value	θ > 10 (rank : 304)
Query Neighborhood Hits	303	Target Neighborhood Hits	401	Shared Neighborhood Hits	204
SwissProt Accessions	Q96QS3	Gene names	ARX
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

ESX1L_HUMAN
NC score	0.213721 (rank : 252)	θ value	θ > 10 (rank : 330)
Query Neighborhood Hits	303	Target Neighborhood Hits	498	Shared Neighborhood Hits	210
SwissProt Accessions	Q8N693, Q7Z6K7	Gene names	ESX1L, ESX1R
Domain Architecture
Description	Extraembryonic, spermatogenesis, homeobox 1-like protein.

HESX1_MOUSE
NC score	0.211392 (rank : 253)	θ value	θ > 10 (rank : 342)
Query Neighborhood Hits	303	Target Neighborhood Hits	331	Shared Neighborhood Hits	188
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

ARX_MOUSE
NC score	0.211321 (rank : 254)	θ value	θ > 10 (rank : 305)
Query Neighborhood Hits	303	Target Neighborhood Hits	398	Shared Neighborhood Hits	201
SwissProt Accessions	O35085, Q9QYT4	Gene names	Arx
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

GSCL_HUMAN
NC score	0.210576 (rank : 255)	θ value	θ > 10 (rank : 339)
Query Neighborhood Hits	303	Target Neighborhood Hits	343	Shared Neighborhood Hits	196
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

HESX1_HUMAN
NC score	0.210517 (rank : 256)	θ value	θ > 10 (rank : 341)
Query Neighborhood Hits	303	Target Neighborhood Hits	326	Shared Neighborhood Hits	188
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

PAX7_HUMAN
NC score	0.210193 (rank : 257)	θ value	6.88961 (rank : 270)
Query Neighborhood Hits	303	Target Neighborhood Hits	456	Shared Neighborhood Hits	218
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
NC score	0.208397 (rank : 258)	θ value	6.88961 (rank : 271)
Query Neighborhood Hits	303	Target Neighborhood Hits	422	Shared Neighborhood Hits	217
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PEPP2_HUMAN
NC score	0.207287 (rank : 259)	θ value	θ > 10 (rank : 394)
Query Neighborhood Hits	303	Target Neighborhood Hits	316	Shared Neighborhood Hits	191
SwissProt Accessions	Q9BQY4, Q9BR00	Gene names	PEPP2, THG1
Domain Architecture
Description	Paired-like homeobox protein PEPP-2 (Testis homeobox gene 1).

PRRX1_HUMAN
NC score	0.206961 (rank : 260)	θ value	θ > 10 (rank : 422)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	201
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

GSCL_MOUSE
NC score	0.206407 (rank : 261)	θ value	θ > 10 (rank : 340)
Query Neighborhood Hits	303	Target Neighborhood Hits	339	Shared Neighborhood Hits	197
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

PRRX2_MOUSE
NC score	0.206305 (rank : 262)	θ value	6.88961 (rank : 277)
Query Neighborhood Hits	303	Target Neighborhood Hits	351	Shared Neighborhood Hits	200
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

SHOX_HUMAN
NC score	0.206277 (rank : 263)	θ value	θ > 10 (rank : 429)
Query Neighborhood Hits	303	Target Neighborhood Hits	363	Shared Neighborhood Hits	196
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

PRRX1_MOUSE
NC score	0.206137 (rank : 264)	θ value	θ > 10 (rank : 423)
Query Neighborhood Hits	303	Target Neighborhood Hits	346	Shared Neighborhood Hits	199
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

CRX_HUMAN
NC score	0.205957 (rank : 265)	θ value	3.0926 (rank : 214)
Query Neighborhood Hits	303	Target Neighborhood Hits	360	Shared Neighborhood Hits	202
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

PRRX2_HUMAN
NC score	0.205302 (rank : 266)	θ value	6.88961 (rank : 276)
Query Neighborhood Hits	303	Target Neighborhood Hits	348	Shared Neighborhood Hits	200
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

DUX1_HUMAN
NC score	0.203236 (rank : 267)	θ value	θ > 10 (rank : 325)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	201
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX5_HUMAN
NC score	0.201903 (rank : 268)	θ value	θ > 10 (rank : 329)
Query Neighborhood Hits	303	Target Neighborhood Hits	330	Shared Neighborhood Hits	201
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

DUX4_HUMAN
NC score	0.201445 (rank : 269)	θ value	θ > 10 (rank : 328)
Query Neighborhood Hits	303	Target Neighborhood Hits	403	Shared Neighborhood Hits	207
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

SHOX2_HUMAN
NC score	0.200702 (rank : 270)	θ value	θ > 10 (rank : 427)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	192
SwissProt Accessions	O60902, O60465, O60467, O60903	Gene names	SHOX2, OG12X, SHOT
Domain Architecture
Description	Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X).

SHOX2_MOUSE
NC score	0.200647 (rank : 271)	θ value	θ > 10 (rank : 428)
Query Neighborhood Hits	303	Target Neighborhood Hits	348	Shared Neighborhood Hits	192
SwissProt Accessions	P70390, P70369	Gene names	Shox2, Og12x, Prx3
Domain Architecture
Description	Short stature homeobox protein 2 (Homeobox protein Og12X) (OG-12) (Paired family homeodomain protein Prx3).

CHX10_MOUSE
NC score	0.200167 (rank : 272)	θ value	6.88961 (rank : 261)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	191
SwissProt Accessions	Q61412	Gene names	Chx10, Vsx2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

CHX10_HUMAN
NC score	0.200099 (rank : 273)	θ value	6.88961 (rank : 260)
Query Neighborhood Hits	303	Target Neighborhood Hits	340	Shared Neighborhood Hits	191
SwissProt Accessions	P58304	Gene names	CHX10, VSX2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

ZHX1_HUMAN
NC score	0.198954 (rank : 274)	θ value	0.279714 (rank : 123)
Query Neighborhood Hits	303	Target Neighborhood Hits	307	Shared Neighborhood Hits	132
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX1_MOUSE
NC score	0.198414 (rank : 275)	θ value	0.279714 (rank : 124)
Query Neighborhood Hits	303	Target Neighborhood Hits	334	Shared Neighborhood Hits	134
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

OTX1_HUMAN
NC score	0.198302 (rank : 276)	θ value	θ > 10 (rank : 387)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	198
SwissProt Accessions	P32242, Q53TG6	Gene names	OTX1
Domain Architecture
Description	Homeobox protein OTX1.

VSX1_HUMAN
NC score	0.198301 (rank : 277)	θ value	8.99809 (rank : 301)
Query Neighborhood Hits	303	Target Neighborhood Hits	344	Shared Neighborhood Hits	191
SwissProt Accessions	Q9NZR4, Q5TF40, Q5TF41, Q9HCU3, Q9NU27	Gene names	VSX1, RINX
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

CRX_MOUSE
NC score	0.198075 (rank : 278)	θ value	θ > 10 (rank : 320)
Query Neighborhood Hits	303	Target Neighborhood Hits	359	Shared Neighborhood Hits	198
SwissProt Accessions	O54751	Gene names	Crx
Domain Architecture
Description	Cone-rod homeobox protein.

OTX1_MOUSE
NC score	0.195991 (rank : 279)	θ value	θ > 10 (rank : 388)
Query Neighborhood Hits	303	Target Neighborhood Hits	372	Shared Neighborhood Hits	199
SwissProt Accessions	P80205	Gene names	Otx1, Otx-1
Domain Architecture
Description	Homeobox protein OTX1.

PAX3_HUMAN
NC score	0.195495 (rank : 280)	θ value	θ > 10 (rank : 391)
Query Neighborhood Hits	303	Target Neighborhood Hits	513	Shared Neighborhood Hits	209
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PAX3_MOUSE
NC score	0.194844 (rank : 281)	θ value	θ > 10 (rank : 392)
Query Neighborhood Hits	303	Target Neighborhood Hits	478	Shared Neighborhood Hits	210
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

DUX3_HUMAN
NC score	0.194304 (rank : 282)	θ value	θ > 10 (rank : 327)
Query Neighborhood Hits	303	Target Neighborhood Hits	312	Shared Neighborhood Hits	199
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

VSX1_MOUSE
NC score	0.188862 (rank : 283)	θ value	θ > 10 (rank : 435)
Query Neighborhood Hits	303	Target Neighborhood Hits	356	Shared Neighborhood Hits	188
SwissProt Accessions	Q91V10	Gene names	Vsx1, Rinx
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

OTX2_MOUSE
NC score	0.184645 (rank : 284)	θ value	θ > 10 (rank : 390)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	195
SwissProt Accessions	P80206	Gene names	Otx2, Otx-2
Domain Architecture
Description	Homeobox protein OTX2.

PAX6_HUMAN
NC score	0.184476 (rank : 285)	θ value	8.99809 (rank : 293)
Query Neighborhood Hits	303	Target Neighborhood Hits	383	Shared Neighborhood Hits	199
SwissProt Accessions	P26367, Q6N006, Q99413	Gene names	PAX6, AN2
Domain Architecture
Description	Paired box protein Pax-6 (Oculorhombin) (Aniridia type II protein).

PAX6_MOUSE
NC score	0.184476 (rank : 286)	θ value	8.99809 (rank : 294)
Query Neighborhood Hits	303	Target Neighborhood Hits	383	Shared Neighborhood Hits	199
SwissProt Accessions	P63015, P32117, P70601, Q62222, Q64037, Q8CEI5, Q8VDB5, Q921Q8	Gene names	Pax6, Pax-6, Sey
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-6 (Oculorhombin).

OTX2_HUMAN
NC score	0.183232 (rank : 287)	θ value	θ > 10 (rank : 389)
Query Neighborhood Hits	303	Target Neighborhood Hits	341	Shared Neighborhood Hits	192
SwissProt Accessions	P32243, Q6GTV3, Q9HAW3, Q9P2R1	Gene names	OTX2
Domain Architecture
Description	Homeobox protein OTX2.

ZHX2_HUMAN
NC score	0.182483 (rank : 288)	θ value	0.813845 (rank : 165)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	110
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

LHX4_MOUSE
NC score	0.182222 (rank : 289)	θ value	0.00228821 (rank : 54)
Query Neighborhood Hits	303	Target Neighborhood Hits	457	Shared Neighborhood Hits	210
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX4_HUMAN
NC score	0.181325 (rank : 290)	θ value	0.0113563 (rank : 63)
Query Neighborhood Hits	303	Target Neighborhood Hits	455	Shared Neighborhood Hits	210
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

ZHX2_MOUSE
NC score	0.180135 (rank : 291)	θ value	0.813845 (rank : 166)
Query Neighborhood Hits	303	Target Neighborhood Hits	435	Shared Neighborhood Hits	118
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

PO6F1_HUMAN
NC score	0.169162 (rank : 292)	θ value	1.06291 (rank : 177)
Query Neighborhood Hits	303	Target Neighborhood Hits	370	Shared Neighborhood Hits	203
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

LHX3_HUMAN
NC score	0.168047 (rank : 293)	θ value	0.0431538 (rank : 75)
Query Neighborhood Hits	303	Target Neighborhood Hits	474	Shared Neighborhood Hits	217
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

PO6F1_MOUSE
NC score	0.163934 (rank : 294)	θ value	1.06291 (rank : 178)
Query Neighborhood Hits	303	Target Neighborhood Hits	581	Shared Neighborhood Hits	207
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

ZFHX2_HUMAN
NC score	0.158909 (rank : 295)	θ value	θ > 10 (rank : 438)
Query Neighborhood Hits	303	Target Neighborhood Hits	1178	Shared Neighborhood Hits	215
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

PO6F2_MOUSE
NC score	0.144834 (rank : 296)	θ value	θ > 10 (rank : 418)
Query Neighborhood Hits	303	Target Neighborhood Hits	639	Shared Neighborhood Hits	206
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

LHX3_MOUSE
NC score	0.143821 (rank : 297)	θ value	θ > 10 (rank : 372)
Query Neighborhood Hits	303	Target Neighborhood Hits	451	Shared Neighborhood Hits	208
SwissProt Accessions	P50481, Q61800, Q61801	Gene names	Lhx3, Lim-3, Lim3, Plim
Domain Architecture
Description	LIM/homeobox protein Lhx3 (Homeobox protein LIM-3) (Homeobox protein P-LIM) (LIM homeobox protein 3).

LHX2_MOUSE
NC score	0.140841 (rank : 298)	θ value	θ > 10 (rank : 371)
Query Neighborhood Hits	303	Target Neighborhood Hits	431	Shared Neighborhood Hits	206
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

LHX2_HUMAN
NC score	0.140635 (rank : 299)	θ value	θ > 10 (rank : 370)
Query Neighborhood Hits	303	Target Neighborhood Hits	432	Shared Neighborhood Hits	206
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

LHX5_HUMAN
NC score	0.137871 (rank : 300)	θ value	θ > 10 (rank : 373)
Query Neighborhood Hits	303	Target Neighborhood Hits	453	Shared Neighborhood Hits	205
SwissProt Accessions	Q9H2C1	Gene names	LHX5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

PO6F2_HUMAN
NC score	0.137194 (rank : 301)	θ value	θ > 10 (rank : 417)
Query Neighborhood Hits	303	Target Neighborhood Hits	618	Shared Neighborhood Hits	199
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

LHX5_MOUSE
NC score	0.137152 (rank : 302)	θ value	θ > 10 (rank : 374)
Query Neighborhood Hits	303	Target Neighborhood Hits	456	Shared Neighborhood Hits	207
SwissProt Accessions	P61375, P50459	Gene names	Lhx5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX9_HUMAN
NC score	0.134644 (rank : 303)	θ value	θ > 10 (rank : 379)
Query Neighborhood Hits	303	Target Neighborhood Hits	444	Shared Neighborhood Hits	203
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX1_MOUSE
NC score	0.134402 (rank : 304)	θ value	θ > 10 (rank : 369)
Query Neighborhood Hits	303	Target Neighborhood Hits	453	Shared Neighborhood Hits	205
SwissProt Accessions	P63006, P36199	Gene names	Lhx1, Lim-1, Lim1
Domain Architecture	No domain graphic available
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX1_HUMAN
NC score	0.134139 (rank : 305)	θ value	θ > 10 (rank : 368)
Query Neighborhood Hits	303	Target Neighborhood Hits	453	Shared Neighborhood Hits	206
SwissProt Accessions	P48742, Q3MIW0	Gene names	LHX1, LIM1
Domain Architecture
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX9_MOUSE
NC score	0.133678 (rank : 306)	θ value	θ > 10 (rank : 380)
Query Neighborhood Hits	303	Target Neighborhood Hits	445	Shared Neighborhood Hits	203
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LMX1B_HUMAN
NC score	0.130806 (rank : 307)	θ value	3.0926 (rank : 222)
Query Neighborhood Hits	303	Target Neighborhood Hits	404	Shared Neighborhood Hits	184
SwissProt Accessions	O60663, O75463	Gene names	LMX1B
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LMX1B_MOUSE
NC score	0.128811 (rank : 308)	θ value	3.0926 (rank : 223)
Query Neighborhood Hits	303	Target Neighborhood Hits	394	Shared Neighborhood Hits	183
SwissProt Accessions	O88609	Gene names	Lmx1b
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LMX1A_HUMAN
NC score	0.127643 (rank : 309)	θ value	θ > 10 (rank : 381)
Query Neighborhood Hits	303	Target Neighborhood Hits	406	Shared Neighborhood Hits	190
SwissProt Accessions	Q8TE12, Q8TE11	Gene names	LMX1A
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

LMX1A_MOUSE
NC score	0.126651 (rank : 310)	θ value	θ > 10 (rank : 382)
Query Neighborhood Hits	303	Target Neighborhood Hits	405	Shared Neighborhood Hits	189
SwissProt Accessions	Q9JKU8	Gene names	Lmx1a
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

CUTL2_MOUSE
NC score	0.122930 (rank : 311)	θ value	1.38821 (rank : 181)
Query Neighborhood Hits	303	Target Neighborhood Hits	771	Shared Neighborhood Hits	122
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

ATBF1_HUMAN
NC score	0.122868 (rank : 312)	θ value	θ > 10 (rank : 306)
Query Neighborhood Hits	303	Target Neighborhood Hits	1547	Shared Neighborhood Hits	248
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ATBF1_MOUSE
NC score	0.122739 (rank : 313)	θ value	θ > 10 (rank : 307)
Query Neighborhood Hits	303	Target Neighborhood Hits	1841	Shared Neighborhood Hits	251
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ISL2_MOUSE
NC score	0.119764 (rank : 314)	θ value	θ > 10 (rank : 367)
Query Neighborhood Hits	303	Target Neighborhood Hits	426	Shared Neighborhood Hits	190
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

ISL2_HUMAN
NC score	0.119041 (rank : 315)	θ value	θ > 10 (rank : 366)
Query Neighborhood Hits	303	Target Neighborhood Hits	435	Shared Neighborhood Hits	193
SwissProt Accessions	Q96A47	Gene names	ISL2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

LHX61_HUMAN
NC score	0.117588 (rank : 316)	θ value	θ > 10 (rank : 375)
Query Neighborhood Hits	303	Target Neighborhood Hits	412	Shared Neighborhood Hits	192
SwissProt Accessions	Q9UPM6, Q5T7S8, Q9NTK3, Q9UPM5	Gene names	LHX6, LHX6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1 (Lhx6).

CUTL2_HUMAN
NC score	0.117339 (rank : 317)	θ value	1.38821 (rank : 180)
Query Neighborhood Hits	303	Target Neighborhood Hits	906	Shared Neighborhood Hits	130
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

ISL1_HUMAN
NC score	0.116393 (rank : 318)	θ value	θ > 10 (rank : 364)
Query Neighborhood Hits	303	Target Neighborhood Hits	421	Shared Neighborhood Hits	188
SwissProt Accessions	P61371, P20663, P47894	Gene names	ISL1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL1_MOUSE
NC score	0.116393 (rank : 319)	θ value	θ > 10 (rank : 365)
Query Neighborhood Hits	303	Target Neighborhood Hits	421	Shared Neighborhood Hits	188
SwissProt Accessions	P61372, P20663, P47894, Q812D8	Gene names	Isl1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

LHX6_MOUSE
NC score	0.114126 (rank : 320)	θ value	θ > 10 (rank : 377)
Query Neighborhood Hits	303	Target Neighborhood Hits	399	Shared Neighborhood Hits	188
SwissProt Accessions	O88706	Gene names	Lhx6
Domain Architecture
Description	LIM/homeobox protein Lhx6.

PO2F2_MOUSE
NC score	0.113076 (rank : 321)	θ value	6.88961 (rank : 274)
Query Neighborhood Hits	303	Target Neighborhood Hits	353	Shared Neighborhood Hits	187
SwissProt Accessions	Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q61995, Q61996, Q64245	Gene names	Pou2f2, Oct2, Otf2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PO2F2_HUMAN
NC score	0.113061 (rank : 322)	θ value	6.88961 (rank : 273)
Query Neighborhood Hits	303	Target Neighborhood Hits	379	Shared Neighborhood Hits	190
SwissProt Accessions	P09086, Q16648, Q9BRS4	Gene names	POU2F2, OCT2, OTF2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PO2F3_MOUSE
NC score	0.111810 (rank : 323)	θ value	θ > 10 (rank : 404)
Query Neighborhood Hits	303	Target Neighborhood Hits	328	Shared Neighborhood Hits	188
SwissProt Accessions	P31362	Gene names	Pou2f3, Epoc1, Oct11, Otf-11, Otf11
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1).

LHX8_MOUSE
NC score	0.111421 (rank : 324)	θ value	θ > 10 (rank : 378)
Query Neighborhood Hits	303	Target Neighborhood Hits	406	Shared Neighborhood Hits	184
SwissProt Accessions	O35652, O70163, O88707	Gene names	Lhx8, Lhx7
Domain Architecture
Description	LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3).

PO2F1_HUMAN
NC score	0.110642 (rank : 325)	θ value	θ > 10 (rank : 401)
Query Neighborhood Hits	303	Target Neighborhood Hits	426	Shared Neighborhood Hits	198
SwissProt Accessions	P14859, Q5TBT7, Q6PK46, Q8NEU9, Q9BPV1	Gene names	POU2F1, OCT1, OTF1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

PO2F3_HUMAN
NC score	0.108554 (rank : 326)	θ value	θ > 10 (rank : 403)
Query Neighborhood Hits	303	Target Neighborhood Hits	319	Shared Neighborhood Hits	185
SwissProt Accessions	Q9UKI9, Q9UKR7, Q9Y504	Gene names	POU2F3, OTF11, PLA1
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein).

LHX61_MOUSE
NC score	0.104530 (rank : 327)	θ value	θ > 10 (rank : 376)
Query Neighborhood Hits	303	Target Neighborhood Hits	396	Shared Neighborhood Hits	174
SwissProt Accessions	Q9R1R0, Q9R1R1	Gene names	Lhx6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1.

DUX2_HUMAN
NC score	0.094727 (rank : 328)	θ value	θ > 10 (rank : 326)
Query Neighborhood Hits	303	Target Neighborhood Hits	173	Shared Neighborhood Hits	94
SwissProt Accessions	O75505	Gene names	DUX2
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 2.

PO2F1_MOUSE
NC score	0.090767 (rank : 329)	θ value	θ > 10 (rank : 402)
Query Neighborhood Hits	303	Target Neighborhood Hits	408	Shared Neighborhood Hits	187
SwissProt Accessions	P25425, Q61994, Q63891, Q6Y681, Q7TSD0, Q8BT04, Q8K570, Q99JH0, Q9WTZ4, Q9WTZ5, Q9WTZ6	Gene names	Pou2f1, Oct-1, Otf-1, Otf1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

HNF6_HUMAN
NC score	0.076289 (rank : 330)	θ value	θ > 10 (rank : 347)
Query Neighborhood Hits	303	Target Neighborhood Hits	127	Shared Neighborhood Hits	54
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HMBX1_HUMAN
NC score	0.076274 (rank : 331)	θ value	θ > 10 (rank : 344)
Query Neighborhood Hits	303	Target Neighborhood Hits	118	Shared Neighborhood Hits	67
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

PIT1_MOUSE
NC score	0.076134 (rank : 332)	θ value	θ > 10 (rank : 400)
Query Neighborhood Hits	303	Target Neighborhood Hits	313	Shared Neighborhood Hits	171
SwissProt Accessions	Q00286	Gene names	Pou1f1, Pit-1, Pit1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

ONEC2_HUMAN
NC score	0.075218 (rank : 333)	θ value	θ > 10 (rank : 385)
Query Neighborhood Hits	303	Target Neighborhood Hits	115	Shared Neighborhood Hits	49
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

HNF6_MOUSE
NC score	0.074368 (rank : 334)	θ value	θ > 10 (rank : 348)
Query Neighborhood Hits	303	Target Neighborhood Hits	124	Shared Neighborhood Hits	55
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

ONEC2_MOUSE
NC score	0.074030 (rank : 335)	θ value	θ > 10 (rank : 386)
Query Neighborhood Hits	303	Target Neighborhood Hits	123	Shared Neighborhood Hits	49
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

PO4F2_HUMAN
NC score	0.073624 (rank : 336)	θ value	θ > 10 (rank : 411)
Query Neighborhood Hits	303	Target Neighborhood Hits	310	Shared Neighborhood Hits	171
SwissProt Accessions	Q12837, Q13883, Q14987	Gene names	POU4F2, BRN3B
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B).

PO4F2_MOUSE
NC score	0.073622 (rank : 337)	θ value	θ > 10 (rank : 412)
Query Neighborhood Hits	303	Target Neighborhood Hits	312	Shared Neighborhood Hits	171
SwissProt Accessions	Q63934, Q63954	Gene names	Pou4f2, Brn3b
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2).

PO4F3_MOUSE
NC score	0.073466 (rank : 338)	θ value	θ > 10 (rank : 414)
Query Neighborhood Hits	303	Target Neighborhood Hits	311	Shared Neighborhood Hits	174
SwissProt Accessions	Q63955	Gene names	Pou4f3, Brn-3c, Brn3c
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F3_HUMAN
NC score	0.073343 (rank : 339)	θ value	θ > 10 (rank : 413)
Query Neighborhood Hits	303	Target Neighborhood Hits	307	Shared Neighborhood Hits	174
SwissProt Accessions	Q15319, O60557	Gene names	POU4F3, BRN3C
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F1_MOUSE
NC score	0.072869 (rank : 340)	θ value	θ > 10 (rank : 410)
Query Neighborhood Hits	303	Target Neighborhood Hits	345	Shared Neighborhood Hits	175
SwissProt Accessions	P17208	Gene names	Pou4f1, Brn-3, Brn3, Brn3a
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0).

PO4F1_HUMAN
NC score	0.072077 (rank : 341)	θ value	θ > 10 (rank : 409)
Query Neighborhood Hits	303	Target Neighborhood Hits	342	Shared Neighborhood Hits	175
SwissProt Accessions	Q01851, Q14986, Q15318	Gene names	POU4F1, BRN3A, RDC1
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1).

CUTL1_MOUSE
NC score	0.071796 (rank : 342)	θ value	θ > 10 (rank : 322)
Query Neighborhood Hits	303	Target Neighborhood Hits	1620	Shared Neighborhood Hits	149
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

PIT1_HUMAN
NC score	0.071573 (rank : 343)	θ value	θ > 10 (rank : 399)
Query Neighborhood Hits	303	Target Neighborhood Hits	292	Shared Neighborhood Hits	154
SwissProt Accessions	P28069, O75757, Q15132, Q15133, Q9UEL3	Gene names	POU1F1, GHF1, PIT1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

HOP_MOUSE
NC score	0.070915 (rank : 344)	θ value	θ > 10 (rank : 350)
Query Neighborhood Hits	303	Target Neighborhood Hits	102	Shared Neighborhood Hits	47
SwissProt Accessions	Q8R1H0, Q8C1N5, Q8CJ22	Gene names	Hop, Hod, Ob1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Homeobox-only protein) (Odd homeobox protein 1) (mOB1).

PO5F1_HUMAN
NC score	0.067464 (rank : 345)	θ value	θ > 10 (rank : 415)
Query Neighborhood Hits	303	Target Neighborhood Hits	321	Shared Neighborhood Hits	165
SwissProt Accessions	Q01860, P31359, Q15167, Q15168, Q16422	Gene names	POU5F1, OCT3, OCT4, OTF3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4).

LARP4_MOUSE
NC score	0.067459 (rank : 346)	θ value	0.0431538 (rank : 74)
Query Neighborhood Hits	303	Target Neighborhood Hits	260	Shared Neighborhood Hits	15
SwissProt Accessions	Q8BWW4, Q3UR69	Gene names	Larp4
Domain Architecture	No domain graphic available
Description	La-related protein 4 (La ribonucleoprotein domain family member 4).

HMBX1_MOUSE
NC score	0.066335 (rank : 347)	θ value	θ > 10 (rank : 345)
Query Neighborhood Hits	303	Target Neighborhood Hits	117	Shared Neighborhood Hits	68
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

PO3F3_MOUSE
NC score	0.066237 (rank : 348)	θ value	θ > 10 (rank : 408)
Query Neighborhood Hits	303	Target Neighborhood Hits	308	Shared Neighborhood Hits	162
SwissProt Accessions	P31361	Gene names	Pou3f3, Brn-1, Brn1, Otf8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F3_HUMAN
NC score	0.066134 (rank : 349)	θ value	θ > 10 (rank : 407)
Query Neighborhood Hits	303	Target Neighborhood Hits	311	Shared Neighborhood Hits	162
SwissProt Accessions	P20264, P78379	Gene names	POU3F3, BRN1, OTF8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

CUTL1_HUMAN
NC score	0.064356 (rank : 350)	θ value	θ > 10 (rank : 321)
Query Neighborhood Hits	303	Target Neighborhood Hits	1574	Shared Neighborhood Hits	142
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

PO3F2_HUMAN
NC score	0.064038 (rank : 351)	θ value	θ > 10 (rank : 405)
Query Neighborhood Hits	303	Target Neighborhood Hits	308	Shared Neighborhood Hits	160
SwissProt Accessions	P20265, Q14960, Q86V54, Q9UJL0	Gene names	POU3F2, BRN2, OCT7, OTF7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F2_MOUSE
NC score	0.064031 (rank : 352)	θ value	θ > 10 (rank : 406)
Query Neighborhood Hits	303	Target Neighborhood Hits	313	Shared Neighborhood Hits	160
SwissProt Accessions	P31360	Gene names	Pou3f2, Brn-2, Brn2, Otf7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

NACAM_MOUSE
NC score	0.062017 (rank : 353)	θ value	0.00869519 (rank : 61)
Query Neighborhood Hits	303	Target Neighborhood Hits	1866	Shared Neighborhood Hits	76
SwissProt Accessions	P70670	Gene names	Naca
Domain Architecture	No domain graphic available
Description	Nascent polypeptide-associated complex subunit alpha, muscle-specific form (Alpha-NAC, muscle-specific form).

HOP_HUMAN
NC score	0.061297 (rank : 354)	θ value	θ > 10 (rank : 349)
Query Neighborhood Hits	303	Target Neighborhood Hits	107	Shared Neighborhood Hits	45
SwissProt Accessions	Q9BPY8, Q8N0V6, Q96CI1	Gene names	HOP, HOD, LAGY, NECC1, OB1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1).

PO5F1_MOUSE
NC score	0.060718 (rank : 355)	θ value	θ > 10 (rank : 416)
Query Neighborhood Hits	303	Target Neighborhood Hits	305	Shared Neighborhood Hits	152
SwissProt Accessions	P20263, Q63843	Gene names	Pou5f1, Oct-3, Oct-4, Otf-3, Otf3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3).

OGFR_HUMAN
NC score	0.060050 (rank : 356)	θ value	0.21417 (rank : 110)
Query Neighborhood Hits	303	Target Neighborhood Hits	1582	Shared Neighborhood Hits	84
SwissProt Accessions	Q9NZT2, O96029, Q4VXW5, Q96CM2, Q9BQW1, Q9H4H0, Q9H7J5, Q9NZT3, Q9NZT4	Gene names	OGFR
Domain Architecture
Description	Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) (7-60 protein).

TAF4_HUMAN
NC score	0.058304 (rank : 357)	θ value	θ > 10 (rank : 430)
Query Neighborhood Hits	303	Target Neighborhood Hits	687	Shared Neighborhood Hits	48
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

MUC7_HUMAN
NC score	0.057118 (rank : 358)	θ value	θ > 10 (rank : 384)
Query Neighborhood Hits	303	Target Neighborhood Hits	538	Shared Neighborhood Hits	46
SwissProt Accessions	Q8TAX7	Gene names	MUC7, MG2
Domain Architecture	No domain graphic available
Description	Mucin-7 precursor (MUC-7) (Salivary mucin-7) (Apo-MG2).

PRP1_HUMAN
NC score	0.055972 (rank : 359)	θ value	θ > 10 (rank : 420)
Query Neighborhood Hits	303	Target Neighborhood Hits	385	Shared Neighborhood Hits	38
SwissProt Accessions	P04280, Q08805, Q15186, Q15187, Q15214, Q15215, Q16038	Gene names	PRB1
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 1 precursor (Salivary proline-rich protein) [Contains: Basic peptide IB-6; Peptide P-H].

MUC1_HUMAN
NC score	0.055851 (rank : 360)	θ value	5.44631e-05 (rank : 37)
Query Neighborhood Hits	303	Target Neighborhood Hits	975	Shared Neighborhood Hits	54
SwissProt Accessions	P15941, P13931, P15942, P17626, Q14128, Q14876, Q16437, Q16442, Q16615, Q9BXA4, Q9UE75, Q9UE76, Q9UQL1, Q9Y4J2	Gene names	MUC1
Domain Architecture
Description	Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut- reactive urinary mucin) (PUM) (Breast carcinoma-associated antigen DF3) (CD227 antigen).

WASIP_MOUSE
NC score	0.053786 (rank : 361)	θ value	θ > 10 (rank : 437)
Query Neighborhood Hits	303	Target Neighborhood Hits	392	Shared Neighborhood Hits	42
SwissProt Accessions	Q8K1I7, Q3U0U8	Gene names	Waspip, Wip
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein-interacting protein (WASP-interacting protein).

PRP2_MOUSE
NC score	0.053202 (rank : 362)	θ value	θ > 10 (rank : 421)
Query Neighborhood Hits	303	Target Neighborhood Hits	347	Shared Neighborhood Hits	36
SwissProt Accessions	P05142	Gene names	Prh1, Prp
Domain Architecture	No domain graphic available
Description	Proline-rich protein MP-2 precursor.

WASIP_HUMAN
NC score	0.052423 (rank : 363)	θ value	θ > 10 (rank : 436)
Query Neighborhood Hits	303	Target Neighborhood Hits	458	Shared Neighborhood Hits	44
SwissProt Accessions	O43516, Q15220, Q6MZU9, Q9BU37, Q9UNP1	Gene names	WASPIP, WIP
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein-interacting protein (WASP-interacting protein) (PRPL-2 protein).

CIC_HUMAN
NC score	0.050670 (rank : 364)	θ value	0.163984 (rank : 98)
Query Neighborhood Hits	303	Target Neighborhood Hits	992	Shared Neighborhood Hits	58
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

ADNP_MOUSE
NC score	0.047993 (rank : 365)	θ value	8.99809 (rank : 280)
Query Neighborhood Hits	303	Target Neighborhood Hits	232	Shared Neighborhood Hits	30
SwissProt Accessions	Q9Z103	Gene names	Adnp
Domain Architecture
Description	Activity-dependent neuroprotector (Activity-dependent neuroprotective protein).

PCLO_MOUSE
NC score	0.044480 (rank : 366)	θ value	0.279714 (rank : 122)
Query Neighborhood Hits	303	Target Neighborhood Hits	2275	Shared Neighborhood Hits	82
SwissProt Accessions	Q9QYX7, Q8CF91, Q8CF92, Q9QYX6, Q9QZJ0	Gene names	Pclo, Acz
Domain Architecture
Description	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein) (Brain-derived HLMN protein).

K1543_HUMAN
NC score	0.042310 (rank : 367)	θ value	6.88961 (rank : 264)
Query Neighborhood Hits	303	Target Neighborhood Hits	435	Shared Neighborhood Hits	31
SwissProt Accessions	Q9P1Y5, Q8NDF1	Gene names	KIAA1543
Domain Architecture	No domain graphic available
Description	Protein KIAA1543.

SAPS1_HUMAN
NC score	0.041014 (rank : 368)	θ value	3.0926 (rank : 227)
Query Neighborhood Hits	303	Target Neighborhood Hits	704	Shared Neighborhood Hits	38
SwissProt Accessions	Q9UPN7, Q504V2, Q6NVJ6, Q9BU97	Gene names	SAPS1, KIAA1115
Domain Architecture
Description	SAPS domain family member 1.

SON_HUMAN
NC score	0.040704 (rank : 369)	θ value	1.38821 (rank : 193)
Query Neighborhood Hits	303	Target Neighborhood Hits	1568	Shared Neighborhood Hits	61
SwissProt Accessions	P18583, O14487, O95981, Q14120, Q9H7B1, Q9P070, Q9P072, Q9UKP9, Q9UPY0	Gene names	SON, C21orf50, DBP5, KIAA1019, NREBP
Domain Architecture
Description	SON protein (SON3) (Negative regulatory element-binding protein) (NRE- binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1).

ZIMP7_MOUSE
NC score	0.039591 (rank : 370)	θ value	0.0736092 (rank : 87)
Query Neighborhood Hits	303	Target Neighborhood Hits	566	Shared Neighborhood Hits	30
SwissProt Accessions	Q8CIE2, Q6P558, Q6P9Q5, Q8BJ00	Gene names	Zimp7, D11Bwg0280e
Domain Architecture	No domain graphic available
Description	PIAS-like protein Zimp7.

TM108_MOUSE
NC score	0.037835 (rank : 371)	θ value	1.38821 (rank : 194)
Query Neighborhood Hits	303	Target Neighborhood Hits	336	Shared Neighborhood Hits	24
SwissProt Accessions	Q8BHE4, Q80WR9	Gene names	Tmem108
Domain Architecture	No domain graphic available
Description	Transmembrane protein 108 precursor.

PSL1_HUMAN
NC score	0.037271 (rank : 372)	θ value	0.125558 (rank : 97)
Query Neighborhood Hits	303	Target Neighborhood Hits	650	Shared Neighborhood Hits	32
SwissProt Accessions	Q8TCT7, O60365, Q567S3, Q8IUH9, Q9BUY6, Q9H3M4, Q9NPN2, Q9P1Z6	Gene names	SPPL2B, KIAA1532, PSL1
Domain Architecture
Description	Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4) (IMP4) (Presenilin-like protein 1).

RGS3_MOUSE
NC score	0.036615 (rank : 373)	θ value	4.03905 (rank : 241)
Query Neighborhood Hits	303	Target Neighborhood Hits	1621	Shared Neighborhood Hits	70
SwissProt Accessions	Q9DC04, Q5SRB1, Q5SRB4, Q5SRB8, Q8CEE3, Q8VI25, Q925G9, Q9JL22, Q9JL23, Q9QXA2	Gene names	Rgs3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (C2PA).

SNPC4_HUMAN
NC score	0.035785 (rank : 374)	θ value	0.62314 (rank : 145)
Query Neighborhood Hits	303	Target Neighborhood Hits	589	Shared Neighborhood Hits	20
SwissProt Accessions	Q5SXM2, Q9Y6P7	Gene names	SNAPC4, SNAP190
Domain Architecture	No domain graphic available
Description	snRNA-activating protein complex subunit 4 (SNAPc subunit 4) (snRNA- activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor subunit alpha) (PSE-binding factor subunit alpha) (PTF subunit alpha).

LEO1_HUMAN
NC score	0.035719 (rank : 375)	θ value	1.38821 (rank : 191)
Query Neighborhood Hits	303	Target Neighborhood Hits	958	Shared Neighborhood Hits	28
SwissProt Accessions	Q8WVC0, Q96N99	Gene names	LEO1, RDL
Domain Architecture	No domain graphic available
Description	RNA polymerase-associated protein LEO1 (Replicative senescence down- regulated leo1-like protein).

NFH_MOUSE
NC score	0.035597 (rank : 376)	θ value	0.0431538 (rank : 77)
Query Neighborhood Hits	303	Target Neighborhood Hits	2247	Shared Neighborhood Hits	71
SwissProt Accessions	P19246, Q5SVF6, Q61959	Gene names	Nefh, Nfh
Domain Architecture
Description	Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).

MINT_MOUSE
NC score	0.035378 (rank : 377)	θ value	0.62314 (rank : 144)
Query Neighborhood Hits	303	Target Neighborhood Hits	1514	Shared Neighborhood Hits	57
SwissProt Accessions	Q62504, Q80TN9, Q99PS4, Q9QZW2	Gene names	Spen, Kiaa0929, Mint, Sharp
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

LPP_HUMAN
NC score	0.033375 (rank : 378)	θ value	6.88961 (rank : 265)
Query Neighborhood Hits	303	Target Neighborhood Hits	775	Shared Neighborhood Hits	42
SwissProt Accessions	Q93052, Q8NFX5	Gene names	LPP
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma).

CECR2_HUMAN
NC score	0.032958 (rank : 379)	θ value	0.365318 (rank : 126)
Query Neighborhood Hits	303	Target Neighborhood Hits	543	Shared Neighborhood Hits	19
SwissProt Accessions	Q9BXF3, Q658Z4, Q96P58, Q9C0C3	Gene names	CECR2, KIAA1740
Domain Architecture
Description	Cat eye syndrome critical region protein 2.

ATF2_MOUSE
NC score	0.032682 (rank : 380)	θ value	0.47712 (rank : 129)
Query Neighborhood Hits	303	Target Neighborhood Hits	397	Shared Neighborhood Hits	15
SwissProt Accessions	P16951, Q64089, Q64090, Q64091	Gene names	Atf2
Domain Architecture
Description	Cyclic AMP-dependent transcription factor ATF-2 (Activating transcription factor 2) (cAMP response element-binding protein CRE- BP1) (MXBP protein).

ATF2_HUMAN
NC score	0.032604 (rank : 381)	θ value	0.47712 (rank : 128)
Query Neighborhood Hits	303	Target Neighborhood Hits	402	Shared Neighborhood Hits	15
SwissProt Accessions	P15336, Q13000	Gene names	ATF2, CREB2, CREBP1
Domain Architecture
Description	Cyclic AMP-dependent transcription factor ATF-2 (Activating transcription factor 2) (cAMP response element-binding protein CRE- BP1) (HB16).

ADNP_HUMAN
NC score	0.032193 (rank : 382)	θ value	8.99809 (rank : 279)
Query Neighborhood Hits	303	Target Neighborhood Hits	265	Shared Neighborhood Hits	26
SwissProt Accessions	Q9H2P0, O94881, Q9UG34	Gene names	ADNP, KIAA0784
Domain Architecture
Description	Activity-dependent neuroprotector (Activity-dependent neuroprotective protein).

LEO1_MOUSE
NC score	0.032103 (rank : 383)	θ value	0.813845 (rank : 161)
Query Neighborhood Hits	303	Target Neighborhood Hits	946	Shared Neighborhood Hits	27
SwissProt Accessions	Q5XJE5, Q640R1	Gene names	Leo1
Domain Architecture	No domain graphic available
Description	RNA polymerase-associated protein LEO1.

CA104_HUMAN
NC score	0.030417 (rank : 384)	θ value	2.36792 (rank : 203)
Query Neighborhood Hits	303	Target Neighborhood Hits	15	Shared Neighborhood Hits	4
SwissProt Accessions	Q66K80, Q8NA07	Gene names	C1orf104
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C1orf104.

LIMD1_MOUSE
NC score	0.029936 (rank : 385)	θ value	0.0431538 (rank : 76)
Query Neighborhood Hits	303	Target Neighborhood Hits	291	Shared Neighborhood Hits	15
SwissProt Accessions	Q9QXD8, Q8C8G4, Q9CW55	Gene names	Limd1
Domain Architecture
Description	LIM domain-containing protein 1.

RTEL1_HUMAN
NC score	0.029664 (rank : 386)	θ value	0.21417 (rank : 112)
Query Neighborhood Hits	303	Target Neighborhood Hits	116	Shared Neighborhood Hits	7
SwissProt Accessions	Q9NZ71, Q5JTV4, Q9BW37, Q9H402, Q9H4X6, Q9NX25, Q9NZ73, Q9UPR4, Q9Y4R6	Gene names	RTEL1, C20orf41, KIAA1088, NHL
Domain Architecture
Description	Regulator of telomere elongation helicase 1 (EC 3.6.1.-) (Helicase- like protein NHL).

RGS3_HUMAN
NC score	0.028994 (rank : 387)	θ value	0.163984 (rank : 105)
Query Neighborhood Hits	303	Target Neighborhood Hits	1375	Shared Neighborhood Hits	45
SwissProt Accessions	P49796, Q5VXC1, Q5VZ05, Q6ZRM5, Q8IUQ1, Q8NC47, Q8NFN4, Q8NFN5, Q8TD59, Q8TD68, Q8WXA0	Gene names	RGS3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (RGP3).

SOX13_MOUSE
NC score	0.028728 (rank : 388)	θ value	0.47712 (rank : 137)
Query Neighborhood Hits	303	Target Neighborhood Hits	495	Shared Neighborhood Hits	31
SwissProt Accessions	Q04891, Q922L3	Gene names	Sox13, Sox-13
Domain Architecture
Description	SOX-13 protein.

DEN1A_HUMAN
NC score	0.028632 (rank : 389)	θ value	0.21417 (rank : 106)
Query Neighborhood Hits	303	Target Neighborhood Hits	176	Shared Neighborhood Hits	16
SwissProt Accessions	Q8TEH3, Q5VWF0, Q8IVD6, Q9H796	Gene names	DENND1A
Domain Architecture	No domain graphic available
Description	DENN domain-containing protein 1A.

MEF2B_MOUSE
NC score	0.025871 (rank : 390)	θ value	1.06291 (rank : 170)
Query Neighborhood Hits	303	Target Neighborhood Hits	218	Shared Neighborhood Hits	12
SwissProt Accessions	O55087, O55088, O55089, O55090, O55231, Q61843	Gene names	Mef2b
Domain Architecture
Description	Myocyte-specific enhancer factor 2B.

TCGAP_HUMAN
NC score	0.023261 (rank : 391)	θ value	4.03905 (rank : 244)
Query Neighborhood Hits	303	Target Neighborhood Hits	872	Shared Neighborhood Hits	46
SwissProt Accessions	O14559, O14552, O14560, Q6ZSP6, Q96CP3, Q9NT23	Gene names	SNX26, TCGAP
Domain Architecture
Description	TC10/CDC42 GTPase-activating protein (Sorting nexin-26).

RTP3_MOUSE
NC score	0.022748 (rank : 392)	θ value	4.03905 (rank : 242)
Query Neighborhood Hits	303	Target Neighborhood Hits	374	Shared Neighborhood Hits	19
SwissProt Accessions	Q5QGU6, Q8VDC2	Gene names	Rtp3, Tmem7
Domain Architecture	No domain graphic available
Description	Receptor-transporting protein 3 (Transmembrane protein 7).

MAP1A_HUMAN
NC score	0.022653 (rank : 393)	θ value	2.36792 (rank : 208)
Query Neighborhood Hits	303	Target Neighborhood Hits	1626	Shared Neighborhood Hits	47
SwissProt Accessions	P78559, O95643, Q12973, Q15882, Q9UJT4	Gene names	MAP1A
Domain Architecture
Description	Microtubule-associated protein 1A (MAP 1A) (Proliferation-related protein p80) [Contains: MAP1 light chain LC2].

RTN1_HUMAN
NC score	0.022533 (rank : 394)	θ value	2.36792 (rank : 213)
Query Neighborhood Hits	303	Target Neighborhood Hits	173	Shared Neighborhood Hits	13
SwissProt Accessions	Q16799, Q16800, Q16801	Gene names	RTN1, NSP
Domain Architecture
Description	Reticulon-1 (Neuroendocrine-specific protein).

WBP4_HUMAN
NC score	0.022104 (rank : 395)	θ value	4.03905 (rank : 246)
Query Neighborhood Hits	303	Target Neighborhood Hits	86	Shared Neighborhood Hits	7
SwissProt Accessions	O75554	Gene names	WBP4, FBP21, FNBP21
Domain Architecture	No domain graphic available
Description	WW domain-binding protein 4 (WBP-4) (Formin-binding protein 21).

FBX46_MOUSE
NC score	0.022032 (rank : 396)	θ value	0.813845 (rank : 149)
Query Neighborhood Hits	303	Target Neighborhood Hits	139	Shared Neighborhood Hits	9
SwissProt Accessions	Q8BG80	Gene names	Fbxo46, Fbx46, Fbxo34l
Domain Architecture	No domain graphic available
Description	F-box only protein 46 (F-box only protein 34-like).

LRRF1_MOUSE
NC score	0.021731 (rank : 397)	θ value	1.81305 (rank : 198)
Query Neighborhood Hits	303	Target Neighborhood Hits	440	Shared Neighborhood Hits	12
SwissProt Accessions	Q3UZ39, O70323, Q3TS94	Gene names	Lrrfip1, Flap
Domain Architecture	No domain graphic available
Description	Leucine-rich repeat flightless-interacting protein 1 (LRR FLII- interacting protein 1) (FLI-LRR-associated protein 1) (Flap-1) (H186 FLAP).

MLL3_MOUSE
NC score	0.021722 (rank : 398)	θ value	1.81305 (rank : 199)
Query Neighborhood Hits	303	Target Neighborhood Hits	1399	Shared Neighborhood Hits	54
SwissProt Accessions	Q8BRH4, Q5YLV9, Q8BK12, Q8C6M3, Q923H5, Q923H6	Gene names	Mll3
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (EC 2.1.1.43) (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3).

MYO15_MOUSE
NC score	0.021246 (rank : 399)	θ value	2.36792 (rank : 211)
Query Neighborhood Hits	303	Target Neighborhood Hits	467	Shared Neighborhood Hits	29
SwissProt Accessions	Q9QZZ4, O70395, Q9QWL6	Gene names	Myo15a, Myo15
Domain Architecture
Description	Myosin-15 (Myosin XV) (Unconventional myosin-15).

ELOA2_HUMAN
NC score	0.021195 (rank : 400)	θ value	2.36792 (rank : 204)
Query Neighborhood Hits	303	Target Neighborhood Hits	165	Shared Neighborhood Hits	8
SwissProt Accessions	Q8IYF1, Q9P2V9	Gene names	TCEB3B, TCEB3L
Domain Architecture
Description	RNA polymerase II transcription factor SIII subunit A2 (Elongin-A2) (EloA2) (Transcription elongation factor B polypeptide 3B).

ADDB_MOUSE
NC score	0.020508 (rank : 401)	θ value	0.365318 (rank : 125)
Query Neighborhood Hits	303	Target Neighborhood Hits	574	Shared Neighborhood Hits	17
SwissProt Accessions	Q9QYB8, Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE5, Q9QYB7	Gene names	Add2
Domain Architecture
Description	Beta-adducin (Erythrocyte adducin subunit beta) (Add97).

BAZ2A_HUMAN
NC score	0.020165 (rank : 402)	θ value	1.06291 (rank : 167)
Query Neighborhood Hits	303	Target Neighborhood Hits	780	Shared Neighborhood Hits	24
SwissProt Accessions	Q9UIF9, O00536, O15030, Q96H26	Gene names	BAZ2A, KIAA0314, TIP5
Domain Architecture
Description	Bromodomain adjacent to zinc finger domain 2A (Transcription termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3).

MY18A_MOUSE
NC score	0.019679 (rank : 403)	θ value	0.000158464 (rank : 40)
Query Neighborhood Hits	303	Target Neighborhood Hits	1989	Shared Neighborhood Hits	23
SwissProt Accessions	Q9JMH9, Q811D7	Gene names	Myo18a, Myspdz
Domain Architecture
Description	Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain) (Molecule associated with JAK3 N-terminus) (MAJN).

SC24A_MOUSE
NC score	0.019041 (rank : 404)	θ value	8.99809 (rank : 297)
Query Neighborhood Hits	303	Target Neighborhood Hits	394	Shared Neighborhood Hits	26
SwissProt Accessions	Q3U2P1, Q3TQ05, Q3TRG7, Q8BIS0	Gene names	Sec24a
Domain Architecture	No domain graphic available
Description	Protein transport protein Sec24A (SEC24-related protein A).

EPN3_MOUSE
NC score	0.017068 (rank : 405)	θ value	4.03905 (rank : 230)
Query Neighborhood Hits	303	Target Neighborhood Hits	312	Shared Neighborhood Hits	21
SwissProt Accessions	Q91W69, Q9CV55	Gene names	Epn3
Domain Architecture
Description	Epsin-3 (EPS-15-interacting protein 3).

MY18A_HUMAN
NC score	0.016073 (rank : 406)	θ value	0.0252991 (rank : 67)
Query Neighborhood Hits	303	Target Neighborhood Hits	1929	Shared Neighborhood Hits	24
SwissProt Accessions	Q92614, Q8IXP8	Gene names	MYO18A, KIAA0216, MYSPDZ
Domain Architecture
Description	Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain) (Molecule associated with JAK3 N-terminus) (MAJN).

CEL_HUMAN
NC score	0.015596 (rank : 407)	θ value	6.88961 (rank : 259)
Query Neighborhood Hits	303	Target Neighborhood Hits	896	Shared Neighborhood Hits	41
SwissProt Accessions	P19835, Q16398	Gene names	CEL, BAL
Domain Architecture
Description	Bile salt-activated lipase precursor (EC 3.1.1.3) (EC 3.1.1.13) (BAL) (Bile salt-stimulated lipase) (BSSL) (Carboxyl ester lipase) (Sterol esterase) (Cholesterol esterase) (Pancreatic lysophospholipase).

K1958_HUMAN
NC score	0.015038 (rank : 408)	θ value	5.27518 (rank : 254)
Query Neighborhood Hits	303	Target Neighborhood Hits	76	Shared Neighborhood Hits	7
SwissProt Accessions	Q8N8K9, Q5T252, Q8TF43, Q96N02	Gene names	KIAA1958
Domain Architecture	No domain graphic available
Description	Protein KIAA1958.

CD45_HUMAN
NC score	0.013860 (rank : 409)	θ value	0.279714 (rank : 115)
Query Neighborhood Hits	303	Target Neighborhood Hits	243	Shared Neighborhood Hits	7
SwissProt Accessions	P08575, Q16614, Q9H0Y6	Gene names	PTPRC, CD45
Domain Architecture
Description	Leukocyte common antigen precursor (EC 3.1.3.48) (L-CA) (CD45 antigen) (T200).

SCAP_HUMAN
NC score	0.012711 (rank : 410)	θ value	4.03905 (rank : 243)
Query Neighborhood Hits	303	Target Neighborhood Hits	368	Shared Neighborhood Hits	10
SwissProt Accessions	Q12770, Q8N2E0, Q8WUA1	Gene names	SCAP, KIAA0199
Domain Architecture
Description	Sterol regulatory element-binding protein cleavage-activating protein (SREBP cleavage-activating protein) (SCAP).

TSNA1_HUMAN
NC score	0.012182 (rank : 411)	θ value	4.03905 (rank : 245)
Query Neighborhood Hits	303	Target Neighborhood Hits	178	Shared Neighborhood Hits	6
SwissProt Accessions	Q96NA8	Gene names	TSNARE1
Domain Architecture	No domain graphic available
Description	t-SNARE domain-containing protein 1.

MNAB_MOUSE
NC score	0.011976 (rank : 412)	θ value	2.36792 (rank : 209)
Query Neighborhood Hits	303	Target Neighborhood Hits	231	Shared Neighborhood Hits	12
SwissProt Accessions	P0C090	Gene names	Mnab
Domain Architecture	No domain graphic available
Description	Membrane-associated nucleic acid-binding protein.

HSF1_MOUSE
NC score	0.011540 (rank : 413)	θ value	6.88961 (rank : 263)
Query Neighborhood Hits	303	Target Neighborhood Hits	267	Shared Neighborhood Hits	15
SwissProt Accessions	P38532, O70462	Gene names	Hsf1
Domain Architecture
Description	Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1).

PHLB1_MOUSE
NC score	0.011473 (rank : 414)	θ value	4.03905 (rank : 240)
Query Neighborhood Hits	303	Target Neighborhood Hits	678	Shared Neighborhood Hits	21
SwissProt Accessions	Q6PDH0, Q80TV2	Gene names	Phldb1, Kiaa0638, Ll5a
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 1 (Protein LL5-alpha).

GASP1_HUMAN
NC score	0.009828 (rank : 415)	θ value	8.99809 (rank : 285)
Query Neighborhood Hits	303	Target Neighborhood Hits	82	Shared Neighborhood Hits	6
SwissProt Accessions	Q5JY77, O43168, Q96LA1	Gene names	GPRASP1, GASP, KIAA0443
Domain Architecture	No domain graphic available
Description	G-protein coupled receptor-associated sorting protein 1 (GASP-1).

SMRD1_HUMAN
NC score	0.009139 (rank : 416)	θ value	8.99809 (rank : 298)
Query Neighborhood Hits	303	Target Neighborhood Hits	85	Shared Neighborhood Hits	4
SwissProt Accessions	Q96GM5, Q92924, Q9Y635	Gene names	SMARCD1, BAF60A
Domain Architecture
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 (SWI/SNF complex 60 kDa subunit) (60 kDa BRG-1/Brm-associated factor subunit A) (BRG1-associated factor 60A).

SMRD1_MOUSE
NC score	0.009138 (rank : 417)	θ value	8.99809 (rank : 299)
Query Neighborhood Hits	303	Target Neighborhood Hits	86	Shared Neighborhood Hits	4
SwissProt Accessions	Q61466, P70384, Q8R0I7	Gene names	Smarcd1, Baf60a, D15Kz1
Domain Architecture
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 (SWI/SNF complex 60 kDa subunit) (60 kDa BRG-1/Brm-associated factor subunit A) (BRG1-associated factor 60A) (D15KZ1 protein).

DPOLL_MOUSE
NC score	0.008389 (rank : 418)	θ value	5.27518 (rank : 249)
Query Neighborhood Hits	303	Target Neighborhood Hits	71	Shared Neighborhood Hits	4
SwissProt Accessions	Q9QXE2, Q9CTJ1	Gene names	Poll, Polk
Domain Architecture
Description	DNA polymerase lambda (EC 2.7.7.7) (EC 4.2.99.-) (Pol Lambda) (DNA polymerase kappa).

CMTA1_HUMAN
NC score	0.007852 (rank : 419)	θ value	8.99809 (rank : 284)
Query Neighborhood Hits	303	Target Neighborhood Hits	217	Shared Neighborhood Hits	6
SwissProt Accessions	Q9Y6Y1, Q5VUE1	Gene names	CAMTA1, KIAA0833
Domain Architecture	No domain graphic available
Description	Calmodulin-binding transcription activator 1.

SEM6C_MOUSE
NC score	0.007690 (rank : 420)	θ value	3.0926 (rank : 228)
Query Neighborhood Hits	303	Target Neighborhood Hits	352	Shared Neighborhood Hits	20
SwissProt Accessions	Q9WTM3	Gene names	Sema6c, Semay
Domain Architecture
Description	Semaphorin-6C precursor (Semaphorin Y) (Sema Y).

NEST_HUMAN
NC score	0.007642 (rank : 421)	θ value	8.99809 (rank : 292)
Query Neighborhood Hits	303	Target Neighborhood Hits	1305	Shared Neighborhood Hits	27
SwissProt Accessions	P48681, O00552	Gene names	NES
Domain Architecture
Description	Nestin.

I5P2_HUMAN
NC score	0.007514 (rank : 422)	θ value	4.03905 (rank : 235)
Query Neighborhood Hits	303	Target Neighborhood Hits	86	Shared Neighborhood Hits	3
SwissProt Accessions	P32019, Q5VSG9, Q5VSH0, Q5VSH1, Q658Q5, Q6P6D4, Q6PD53, Q86YE1	Gene names	INPP5B
Domain Architecture	No domain graphic available
Description	Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor (EC 3.1.3.36) (Phosphoinositide 5-phosphatase) (5PTase) (75 kDa inositol polyphosphate-5-phosphatase).

IRF3_HUMAN
NC score	0.007050 (rank : 423)	θ value	5.27518 (rank : 253)
Query Neighborhood Hits	303	Target Neighborhood Hits	129	Shared Neighborhood Hits	5
SwissProt Accessions	Q14653	Gene names	IRF3
Domain Architecture
Description	Interferon regulatory factor 3 (IRF-3).

RBNS5_HUMAN
NC score	0.006759 (rank : 424)	θ value	8.99809 (rank : 296)
Query Neighborhood Hits	303	Target Neighborhood Hits	242	Shared Neighborhood Hits	8
SwissProt Accessions	Q9H1K0, Q3KP30, Q59EY8, Q8NAQ1	Gene names	ZFYVE20
Domain Architecture	No domain graphic available
Description	Rabenosyn-5 (FYVE finger-containing Rab5 effector protein rabenosyn-5) (Zinc finger FYVE domain-containing protein 20) (110 kDa protein).

BRAC_HUMAN
NC score	0.004658 (rank : 425)	θ value	4.03905 (rank : 229)
Query Neighborhood Hits	303	Target Neighborhood Hits	68	Shared Neighborhood Hits	4
SwissProt Accessions	O15178	Gene names	T
Domain Architecture
Description	Brachyury protein (T protein).

PK2L1_HUMAN
NC score	0.004644 (rank : 426)	θ value	6.88961 (rank : 272)
Query Neighborhood Hits	303	Target Neighborhood Hits	132	Shared Neighborhood Hits	3
SwissProt Accessions	Q9P0L9, O75972, Q9UP35, Q9UPA2	Gene names	PKD2L1, PKD2L, PKDL
Domain Architecture
Description	Polycystic kidney disease 2-like 1 protein (Polycystin-L) (Polycystin- 2 homolog).

SO4A1_HUMAN
NC score	0.004176 (rank : 427)	θ value	5.27518 (rank : 258)
Query Neighborhood Hits	303	Target Neighborhood Hits	54	Shared Neighborhood Hits	2
SwissProt Accessions	Q96BD0, Q9H4T7, Q9H4T8, Q9H8P2, Q9NWX8, Q9UI35, Q9UIG7	Gene names	SLCO4A1, OATP1, OATPE, SLC21A12
Domain Architecture
Description	Solute carrier organic anion transporter family member 4A1 (Solute carrier family 21 member 12) (Sodium-independent organic anion transporter E) (Organic anion-transporting polypeptide E) (OATP-E) (Colon organic anion transporter) (Organic anion transporter polypeptide-related protein 1) (OATP-RP1) (OATPRP1) (POAT).

PLCG1_HUMAN
NC score	0.003865 (rank : 428)	θ value	5.27518 (rank : 257)
Query Neighborhood Hits	303	Target Neighborhood Hits	293	Shared Neighborhood Hits	3
SwissProt Accessions	P19174, Q2V575	Gene names	PLCG1, PLC1
Domain Architecture
Description	1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148).

PLCG1_MOUSE
NC score	0.002933 (rank : 429)	θ value	8.99809 (rank : 295)
Query Neighborhood Hits	303	Target Neighborhood Hits	314	Shared Neighborhood Hits	3
SwissProt Accessions	Q62077, Q6P1G1	Gene names	Plcg1, Plcg-1
Domain Architecture	No domain graphic available
Description	1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148).

CAC1A_HUMAN
NC score	0.001567 (rank : 430)	θ value	8.99809 (rank : 281)
Query Neighborhood Hits	303	Target Neighborhood Hits	387	Shared Neighborhood Hits	14
SwissProt Accessions	O00555, P78510, P78511, Q16290, Q92690, Q99790, Q99791, Q99792, Q99793	Gene names	CACNA1A, CACH4, CACN3, CACNL1A4
Domain Architecture
Description	Voltage-dependent P/Q-type calcium channel subunit alpha-1A (Voltage- gated calcium channel subunit alpha Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI).

EGR4_HUMAN
NC score	-0.001706 (rank : 431)	θ value	1.81305 (rank : 195)
Query Neighborhood Hits	303	Target Neighborhood Hits	939	Shared Neighborhood Hits	19
SwissProt Accessions	Q05215	Gene names	EGR4
Domain Architecture
Description	Early growth response protein 4 (EGR-4) (AT133).

SP5_MOUSE
NC score	-0.002516 (rank : 432)	θ value	1.81305 (rank : 201)
Query Neighborhood Hits	303	Target Neighborhood Hits	821	Shared Neighborhood Hits	22
SwissProt Accessions	Q9JHX2	Gene names	Sp5
Domain Architecture
Description	Transcription factor Sp5.

SP5_HUMAN
NC score	-0.003812 (rank : 433)	θ value	6.88961 (rank : 278)
Query Neighborhood Hits	303	Target Neighborhood Hits	832	Shared Neighborhood Hits	17
SwissProt Accessions	Q6BEB4	Gene names	SP5
Domain Architecture	No domain graphic available
Description	Transcription factor Sp5.

ERBB2_HUMAN
NC score	-0.004019 (rank : 434)	θ value	5.27518 (rank : 250)
Query Neighborhood Hits	303	Target Neighborhood Hits	1073	Shared Neighborhood Hits	15
SwissProt Accessions	P04626, Q14256, Q6LDV1, Q9UMK4	Gene names	ERBB2, HER2, NEU, NGL
Domain Architecture
Description	Receptor tyrosine-protein kinase erbB-2 precursor (EC 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) (Tyrosine kinase-type cell surface receptor HER2) (MLN 19).

TITIN_HUMAN
NC score	-0.004316 (rank : 435)	θ value	8.99809 (rank : 300)
Query Neighborhood Hits	303	Target Neighborhood Hits	2923	Shared Neighborhood Hits	51
SwissProt Accessions	Q8WZ42, Q10465, Q10466, Q15598, Q2XUS3, Q32Q60, Q4U1Z6, Q6NSG0, Q6PDB1, Q6PJP0, Q7KYM2, Q7KYN4, Q7KYN5, Q7LDM3, Q7Z2X3, Q8TCG8, Q8WZ51, Q8WZ52, Q8WZ53, Q8WZB3, Q92761, Q92762, Q9UD97, Q9UP84, Q9Y6L9	Gene names	TTN
Domain Architecture	No domain graphic available
Description	Titin (EC 2.7.11.1) (Connectin) (Rhabdomyosarcoma antigen MU-RMS- 40.14).

NEK4_MOUSE
NC score	-0.005482 (rank : 436)	θ value	0.47712 (rank : 135)
Query Neighborhood Hits	303	Target Neighborhood Hits	899	Shared Neighborhood Hits	7
SwissProt Accessions	Q9Z1J2, O35673, Q9R1J1	Gene names	Nek4, Stk2
Domain Architecture
Description	Serine/threonine-protein kinase Nek4 (EC 2.7.11.1) (NimA-related protein kinase 4) (Serine/threonine-protein kinase 2).

ZN394_HUMAN
NC score	-0.007356 (rank : 437)	θ value	8.99809 (rank : 302)
Query Neighborhood Hits	303	Target Neighborhood Hits	752	Shared Neighborhood Hits	8
SwissProt Accessions	Q53GI3, Q6P5X9, Q8TB27, Q9HA37	Gene names	ZNF394
Domain Architecture	No domain graphic available
Description	Zinc finger protein 394.

ZNF16_HUMAN
NC score	-0.007812 (rank : 438)	θ value	8.99809 (rank : 303)
Query Neighborhood Hits	303	Target Neighborhood Hits	771	Shared Neighborhood Hits	11
SwissProt Accessions	P17020, Q96FG0	Gene names	ZNF16, KOX9
Domain Architecture	No domain graphic available
Description	Zinc finger protein 16 (Zinc finger protein KOX9).