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Network neighborhood for query Sequence : SIX5_MOUSE

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SIX5_MOUSE
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

SIX5_HUMAN
θ value	0 (rank : 1)	NC score	0.966856 (rank : 2)
Query Neighborhood Hits	354	Target Neighborhood Hits	386	Shared Neighborhood Hits	267
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX5_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	354	Target Neighborhood Hits	354	Shared Neighborhood Hits	354
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

SIX4_MOUSE
θ value	2.92676e-75 (rank : 3)	NC score	0.906455 (rank : 4)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	234
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

SIX4_HUMAN
θ value	9.41505e-74 (rank : 4)	NC score	0.910125 (rank : 3)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	234
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX2_MOUSE
θ value	2.10721e-57 (rank : 5)	NC score	0.897738 (rank : 9)
Query Neighborhood Hits	354	Target Neighborhood Hits	376	Shared Neighborhood Hits	225
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX1_HUMAN
θ value	8.00737e-57 (rank : 6)	NC score	0.900405 (rank : 5)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	217
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_MOUSE
θ value	8.00737e-57 (rank : 7)	NC score	0.900357 (rank : 6)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	217
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX6_HUMAN
θ value	3.71957e-54 (rank : 8)	NC score	0.897545 (rank : 10)
Query Neighborhood Hits	354	Target Neighborhood Hits	269	Shared Neighborhood Hits	197
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

SIX2_HUMAN
θ value	8.28633e-54 (rank : 9)	NC score	0.898650 (rank : 7)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	218
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX6_MOUSE
θ value	1.08223e-53 (rank : 10)	NC score	0.898537 (rank : 8)
Query Neighborhood Hits	354	Target Neighborhood Hits	267	Shared Neighborhood Hits	198
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

SIX3_HUMAN
θ value	1.32293e-51 (rank : 11)	NC score	0.890902 (rank : 11)
Query Neighborhood Hits	354	Target Neighborhood Hits	285	Shared Neighborhood Hits	198
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
θ value	1.32293e-51 (rank : 12)	NC score	0.890818 (rank : 12)
Query Neighborhood Hits	354	Target Neighborhood Hits	289	Shared Neighborhood Hits	198
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SON_HUMAN
θ value	2.79066e-09 (rank : 13)	NC score	0.113734 (rank : 331)
Query Neighborhood Hits	354	Target Neighborhood Hits	1568	Shared Neighborhood Hits	105
SwissProt Accessions	P18583, O14487, O95981, Q14120, Q9H7B1, Q9P070, Q9P072, Q9UKP9, Q9UPY0	Gene names	SON, C21orf50, DBP5, KIAA1019, NREBP
Domain Architecture
Description	SON protein (SON3) (Negative regulatory element-binding protein) (NRE- binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1).

NACAM_MOUSE
θ value	2.88788e-06 (rank : 14)	NC score	0.108294 (rank : 333)
Query Neighborhood Hits	354	Target Neighborhood Hits	1866	Shared Neighborhood Hits	117
SwissProt Accessions	P70670	Gene names	Naca
Domain Architecture	No domain graphic available
Description	Nascent polypeptide-associated complex subunit alpha, muscle-specific form (Alpha-NAC, muscle-specific form).

PKNX1_MOUSE
θ value	4.1701e-05 (rank : 15)	NC score	0.380171 (rank : 34)
Query Neighborhood Hits	354	Target Neighborhood Hits	103	Shared Neighborhood Hits	83
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

IRX2_HUMAN
θ value	5.44631e-05 (rank : 16)	NC score	0.406470 (rank : 18)
Query Neighborhood Hits	354	Target Neighborhood Hits	358	Shared Neighborhood Hits	169
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

PKNX1_HUMAN
θ value	7.1131e-05 (rank : 17)	NC score	0.375944 (rank : 35)
Query Neighborhood Hits	354	Target Neighborhood Hits	101	Shared Neighborhood Hits	83
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

IRX1_HUMAN
θ value	9.29e-05 (rank : 18)	NC score	0.410359 (rank : 15)
Query Neighborhood Hits	354	Target Neighborhood Hits	285	Shared Neighborhood Hits	157
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_MOUSE
θ value	9.29e-05 (rank : 19)	NC score	0.407722 (rank : 16)
Query Neighborhood Hits	354	Target Neighborhood Hits	269	Shared Neighborhood Hits	157
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX6_MOUSE
θ value	0.000158464 (rank : 20)	NC score	0.407161 (rank : 17)
Query Neighborhood Hits	354	Target Neighborhood Hits	256	Shared Neighborhood Hits	164
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX2_MOUSE
θ value	0.00020696 (rank : 21)	NC score	0.406275 (rank : 19)
Query Neighborhood Hits	354	Target Neighborhood Hits	264	Shared Neighborhood Hits	158
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

PKNX2_HUMAN
θ value	0.00035302 (rank : 22)	NC score	0.367118 (rank : 40)
Query Neighborhood Hits	354	Target Neighborhood Hits	133	Shared Neighborhood Hits	86
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_MOUSE
θ value	0.00035302 (rank : 23)	NC score	0.365208 (rank : 41)
Query Neighborhood Hits	354	Target Neighborhood Hits	197	Shared Neighborhood Hits	95
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

IRX3_HUMAN
θ value	0.000461057 (rank : 24)	NC score	0.412258 (rank : 13)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	162
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_MOUSE
θ value	0.000461057 (rank : 25)	NC score	0.411608 (rank : 14)
Query Neighborhood Hits	354	Target Neighborhood Hits	303	Shared Neighborhood Hits	160
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX5_HUMAN
θ value	0.000461057 (rank : 26)	NC score	0.395204 (rank : 25)
Query Neighborhood Hits	354	Target Neighborhood Hits	362	Shared Neighborhood Hits	162
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

IRX5_MOUSE
θ value	0.000461057 (rank : 27)	NC score	0.386999 (rank : 27)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	157
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

IRX4_HUMAN
θ value	0.000602161 (rank : 28)	NC score	0.400578 (rank : 21)
Query Neighborhood Hits	354	Target Neighborhood Hits	276	Shared Neighborhood Hits	170
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX4_MOUSE
θ value	0.000602161 (rank : 29)	NC score	0.400162 (rank : 23)
Query Neighborhood Hits	354	Target Neighborhood Hits	286	Shared Neighborhood Hits	170
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX6_HUMAN
θ value	0.000602161 (rank : 30)	NC score	0.404872 (rank : 20)
Query Neighborhood Hits	354	Target Neighborhood Hits	262	Shared Neighborhood Hits	164
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

DBX1_MOUSE
θ value	0.00134147 (rank : 31)	NC score	0.294300 (rank : 48)
Query Neighborhood Hits	354	Target Neighborhood Hits	346	Shared Neighborhood Hits	200
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

BSH_MOUSE
θ value	0.00175202 (rank : 32)	NC score	0.276914 (rank : 52)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	205
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

ZHX2_MOUSE
θ value	0.00175202 (rank : 33)	NC score	0.249028 (rank : 91)
Query Neighborhood Hits	354	Target Neighborhood Hits	435	Shared Neighborhood Hits	156
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

CDX4_HUMAN
θ value	0.00228821 (rank : 34)	NC score	0.250872 (rank : 88)
Query Neighborhood Hits	354	Target Neighborhood Hits	366	Shared Neighborhood Hits	203
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

GON4L_MOUSE
θ value	0.00228821 (rank : 35)	NC score	0.055435 (rank : 405)
Query Neighborhood Hits	354	Target Neighborhood Hits	455	Shared Neighborhood Hits	39
SwissProt Accessions	Q9DB00, Q80TB4, Q91YI9	Gene names	Gon4l, Gon4, KIAA1606
Domain Architecture	No domain graphic available
Description	GON-4-like protein (GON-4 homolog).

PBX4_MOUSE
θ value	0.00228821 (rank : 36)	NC score	0.400313 (rank : 22)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	193
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

MEIS3_HUMAN
θ value	0.00298849 (rank : 37)	NC score	0.392530 (rank : 26)
Query Neighborhood Hits	354	Target Neighborhood Hits	118	Shared Neighborhood Hits	102
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

TF2LX_HUMAN
θ value	0.00298849 (rank : 38)	NC score	0.398472 (rank : 24)
Query Neighborhood Hits	354	Target Neighborhood Hits	108	Shared Neighborhood Hits	79
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

MEIS3_MOUSE
θ value	0.00390308 (rank : 39)	NC score	0.385672 (rank : 28)
Query Neighborhood Hits	354	Target Neighborhood Hits	118	Shared Neighborhood Hits	101
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

CDX4_MOUSE
θ value	0.00509761 (rank : 40)	NC score	0.247992 (rank : 92)
Query Neighborhood Hits	354	Target Neighborhood Hits	378	Shared Neighborhood Hits	203
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

K1683_HUMAN
θ value	0.00509761 (rank : 41)	NC score	0.087341 (rank : 348)
Query Neighborhood Hits	354	Target Neighborhood Hits	240	Shared Neighborhood Hits	33
SwissProt Accessions	Q9H0B3, Q8N4G8, Q96M14, Q9C0I0	Gene names	KIAA1683
Domain Architecture	No domain graphic available
Description	Protein KIAA1683.

K1802_MOUSE
θ value	0.00665767 (rank : 42)	NC score	0.046738 (rank : 421)
Query Neighborhood Hits	354	Target Neighborhood Hits	1596	Shared Neighborhood Hits	83
SwissProt Accessions	Q8K327, Q3UZ85, Q6ZPI1	Gene names	Kiaa1802, D8Ertd457e
Domain Architecture	No domain graphic available
Description	Zinc finger protein KIAA1802.

MEIS1_HUMAN
θ value	0.00665767 (rank : 43)	NC score	0.381076 (rank : 33)
Query Neighborhood Hits	354	Target Neighborhood Hits	115	Shared Neighborhood Hits	105
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS1_MOUSE
θ value	0.00665767 (rank : 44)	NC score	0.381078 (rank : 32)
Query Neighborhood Hits	354	Target Neighborhood Hits	115	Shared Neighborhood Hits	105
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS2_HUMAN
θ value	0.00665767 (rank : 45)	NC score	0.371306 (rank : 38)
Query Neighborhood Hits	354	Target Neighborhood Hits	182	Shared Neighborhood Hits	112
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
θ value	0.00665767 (rank : 46)	NC score	0.370796 (rank : 39)
Query Neighborhood Hits	354	Target Neighborhood Hits	208	Shared Neighborhood Hits	116
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

TGIF2_MOUSE
θ value	0.00665767 (rank : 47)	NC score	0.359262 (rank : 42)
Query Neighborhood Hits	354	Target Neighborhood Hits	127	Shared Neighborhood Hits	69
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

HXA13_HUMAN
θ value	0.00869519 (rank : 48)	NC score	0.243857 (rank : 101)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	212
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

HXA13_MOUSE
θ value	0.00869519 (rank : 49)	NC score	0.244085 (rank : 100)
Query Neighborhood Hits	354	Target Neighborhood Hits	351	Shared Neighborhood Hits	210
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

PBX1_HUMAN
θ value	0.00869519 (rank : 50)	NC score	0.373616 (rank : 36)
Query Neighborhood Hits	354	Target Neighborhood Hits	317	Shared Neighborhood Hits	195
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
θ value	0.00869519 (rank : 51)	NC score	0.373616 (rank : 37)
Query Neighborhood Hits	354	Target Neighborhood Hits	317	Shared Neighborhood Hits	195
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PBX2_HUMAN
θ value	0.00869519 (rank : 52)	NC score	0.383894 (rank : 30)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	198
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX2_MOUSE
θ value	0.00869519 (rank : 53)	NC score	0.384024 (rank : 29)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	199
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

TF2LY_HUMAN
θ value	0.00869519 (rank : 54)	NC score	0.383133 (rank : 31)
Query Neighborhood Hits	354	Target Neighborhood Hits	90	Shared Neighborhood Hits	71
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

ZHX2_HUMAN
θ value	0.00869519 (rank : 55)	NC score	0.255692 (rank : 81)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	147
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

HXB13_HUMAN
θ value	0.0148317 (rank : 56)	NC score	0.261811 (rank : 62)
Query Neighborhood Hits	354	Target Neighborhood Hits	377	Shared Neighborhood Hits	213
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXB13_MOUSE
θ value	0.0148317 (rank : 57)	NC score	0.260006 (rank : 68)
Query Neighborhood Hits	354	Target Neighborhood Hits	384	Shared Neighborhood Hits	213
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

K0431_HUMAN
θ value	0.0148317 (rank : 58)	NC score	0.081532 (rank : 352)
Query Neighborhood Hits	354	Target Neighborhood Hits	211	Shared Neighborhood Hits	5
SwissProt Accessions	O43313	Gene names	KIAA0431
Domain Architecture	No domain graphic available
Description	Protein KIAA0431.

DLX3_HUMAN
θ value	0.0193708 (rank : 59)	NC score	0.268030 (rank : 56)
Query Neighborhood Hits	354	Target Neighborhood Hits	369	Shared Neighborhood Hits	207
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

GSCR1_HUMAN
θ value	0.0193708 (rank : 60)	NC score	0.111207 (rank : 332)
Query Neighborhood Hits	354	Target Neighborhood Hits	674	Shared Neighborhood Hits	73
SwissProt Accessions	Q9NZM4	Gene names	GLTSCR1
Domain Architecture	No domain graphic available
Description	Glioma tumor suppressor candidate region gene 1 protein.

HXD13_HUMAN
θ value	0.0193708 (rank : 61)	NC score	0.256249 (rank : 79)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	207
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
θ value	0.0193708 (rank : 62)	NC score	0.255743 (rank : 80)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	205
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

ZFHX2_HUMAN
θ value	0.0193708 (rank : 63)	NC score	0.229179 (rank : 126)
Query Neighborhood Hits	354	Target Neighborhood Hits	1178	Shared Neighborhood Hits	242
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

CUTL1_MOUSE
θ value	0.0252991 (rank : 64)	NC score	0.132878 (rank : 323)
Query Neighborhood Hits	354	Target Neighborhood Hits	1620	Shared Neighborhood Hits	203
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

MAGE1_HUMAN
θ value	0.0252991 (rank : 65)	NC score	0.065698 (rank : 381)
Query Neighborhood Hits	354	Target Neighborhood Hits	1389	Shared Neighborhood Hits	104
SwissProt Accessions	Q9HCI5, Q86TG0, Q8TD92, Q9H216	Gene names	MAGEE1, HCA1, KIAA1587
Domain Architecture	No domain graphic available
Description	Melanoma-associated antigen E1 (MAGE-E1 antigen) (Hepatocellular carcinoma-associated protein 1).

NKX26_MOUSE
θ value	0.0252991 (rank : 66)	NC score	0.251018 (rank : 87)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	195
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

PITX2_HUMAN
θ value	0.0252991 (rank : 67)	NC score	0.268986 (rank : 55)
Query Neighborhood Hits	354	Target Neighborhood Hits	381	Shared Neighborhood Hits	219
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
θ value	0.0252991 (rank : 68)	NC score	0.267581 (rank : 58)
Query Neighborhood Hits	354	Target Neighborhood Hits	383	Shared Neighborhood Hits	216
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

PITX3_HUMAN
θ value	0.0252991 (rank : 69)	NC score	0.270277 (rank : 53)
Query Neighborhood Hits	354	Target Neighborhood Hits	366	Shared Neighborhood Hits	216
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_MOUSE
θ value	0.0252991 (rank : 70)	NC score	0.269310 (rank : 54)
Query Neighborhood Hits	354	Target Neighborhood Hits	380	Shared Neighborhood Hits	218
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

TGIF2_HUMAN
θ value	0.0252991 (rank : 71)	NC score	0.348262 (rank : 45)
Query Neighborhood Hits	354	Target Neighborhood Hits	94	Shared Neighborhood Hits	60
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

ZHX3_MOUSE
θ value	0.0252991 (rank : 72)	NC score	0.260616 (rank : 65)
Query Neighborhood Hits	354	Target Neighborhood Hits	321	Shared Neighborhood Hits	175
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

HHEX_MOUSE
θ value	0.0330416 (rank : 73)	NC score	0.251350 (rank : 86)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	198
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HME1_HUMAN
θ value	0.0330416 (rank : 74)	NC score	0.234297 (rank : 119)
Query Neighborhood Hits	354	Target Neighborhood Hits	384	Shared Neighborhood Hits	207
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HME1_MOUSE
θ value	0.0330416 (rank : 75)	NC score	0.234305 (rank : 118)
Query Neighborhood Hits	354	Target Neighborhood Hits	397	Shared Neighborhood Hits	212
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

ISL1_HUMAN
θ value	0.0330416 (rank : 76)	NC score	0.245654 (rank : 96)
Query Neighborhood Hits	354	Target Neighborhood Hits	421	Shared Neighborhood Hits	190
SwissProt Accessions	P61371, P20663, P47894	Gene names	ISL1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL1_MOUSE
θ value	0.0330416 (rank : 77)	NC score	0.245654 (rank : 97)
Query Neighborhood Hits	354	Target Neighborhood Hits	421	Shared Neighborhood Hits	190
SwissProt Accessions	P61372, P20663, P47894, Q812D8	Gene names	Isl1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL2_HUMAN
θ value	0.0330416 (rank : 78)	NC score	0.241066 (rank : 108)
Query Neighborhood Hits	354	Target Neighborhood Hits	435	Shared Neighborhood Hits	196
SwissProt Accessions	Q96A47	Gene names	ISL2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

ISL2_MOUSE
θ value	0.0330416 (rank : 79)	NC score	0.241249 (rank : 107)
Query Neighborhood Hits	354	Target Neighborhood Hits	426	Shared Neighborhood Hits	193
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

YETS2_MOUSE
θ value	0.0330416 (rank : 80)	NC score	0.059566 (rank : 396)
Query Neighborhood Hits	354	Target Neighborhood Hits	278	Shared Neighborhood Hits	35
SwissProt Accessions	Q3TUF7, Q6PGF8, Q80TI2, Q8CG86	Gene names	Yeats2, Kiaa1197
Domain Architecture	No domain graphic available
Description	YEATS domain-containing protein 2.

ZHX3_HUMAN
θ value	0.0330416 (rank : 81)	NC score	0.255492 (rank : 82)
Query Neighborhood Hits	354	Target Neighborhood Hits	331	Shared Neighborhood Hits	175
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

BARX1_HUMAN
θ value	0.0431538 (rank : 82)	NC score	0.225207 (rank : 131)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	192
SwissProt Accessions	Q9HBU1	Gene names	BARX1
Domain Architecture
Description	Homeobox protein BarH-like 1.

CDX2_HUMAN
θ value	0.0431538 (rank : 83)	NC score	0.241459 (rank : 106)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	185
SwissProt Accessions	Q99626, O00503, Q969L8	Gene names	CDX2, CDX3
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3).

CDX2_MOUSE
θ value	0.0431538 (rank : 84)	NC score	0.245078 (rank : 99)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	186
SwissProt Accessions	P43241	Gene names	Cdx2, Cdx-2
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2).

CUTL1_HUMAN
θ value	0.0431538 (rank : 85)	NC score	0.123814 (rank : 328)
Query Neighborhood Hits	354	Target Neighborhood Hits	1574	Shared Neighborhood Hits	194
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

DUX4_HUMAN
θ value	0.0431538 (rank : 86)	NC score	0.289143 (rank : 49)
Query Neighborhood Hits	354	Target Neighborhood Hits	403	Shared Neighborhood Hits	211
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

HHEX_HUMAN
θ value	0.0431538 (rank : 87)	NC score	0.253054 (rank : 84)
Query Neighborhood Hits	354	Target Neighborhood Hits	358	Shared Neighborhood Hits	195
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HLX1_HUMAN
θ value	0.0431538 (rank : 88)	NC score	0.267685 (rank : 57)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	207
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

HXB1_HUMAN
θ value	0.0431538 (rank : 89)	NC score	0.225167 (rank : 132)
Query Neighborhood Hits	354	Target Neighborhood Hits	356	Shared Neighborhood Hits	198
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

LHX1_HUMAN
θ value	0.0431538 (rank : 90)	NC score	0.213283 (rank : 161)
Query Neighborhood Hits	354	Target Neighborhood Hits	453	Shared Neighborhood Hits	206
SwissProt Accessions	P48742, Q3MIW0	Gene names	LHX1, LIM1
Domain Architecture
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX1_MOUSE
θ value	0.0431538 (rank : 91)	NC score	0.213876 (rank : 157)
Query Neighborhood Hits	354	Target Neighborhood Hits	453	Shared Neighborhood Hits	206
SwissProt Accessions	P63006, P36199	Gene names	Lhx1, Lim-1, Lim1
Domain Architecture	No domain graphic available
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX5_HUMAN
θ value	0.0431538 (rank : 92)	NC score	0.216258 (rank : 148)
Query Neighborhood Hits	354	Target Neighborhood Hits	453	Shared Neighborhood Hits	207
SwissProt Accessions	Q9H2C1	Gene names	LHX5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX5_MOUSE
θ value	0.0431538 (rank : 93)	NC score	0.213806 (rank : 158)
Query Neighborhood Hits	354	Target Neighborhood Hits	456	Shared Neighborhood Hits	208
SwissProt Accessions	P61375, P50459	Gene names	Lhx5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

PBX3_HUMAN
θ value	0.0431538 (rank : 94)	NC score	0.352913 (rank : 44)
Query Neighborhood Hits	354	Target Neighborhood Hits	306	Shared Neighborhood Hits	186
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_MOUSE
θ value	0.0431538 (rank : 95)	NC score	0.352944 (rank : 43)
Query Neighborhood Hits	354	Target Neighborhood Hits	306	Shared Neighborhood Hits	186
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PITX1_HUMAN
θ value	0.0431538 (rank : 96)	NC score	0.260395 (rank : 67)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	207
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

PITX1_MOUSE
θ value	0.0431538 (rank : 97)	NC score	0.261396 (rank : 64)
Query Neighborhood Hits	354	Target Neighborhood Hits	362	Shared Neighborhood Hits	211
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

FLRT1_HUMAN
θ value	0.0563607 (rank : 98)	NC score	0.007899 (rank : 492)
Query Neighborhood Hits	354	Target Neighborhood Hits	286	Shared Neighborhood Hits	5
SwissProt Accessions	Q9NZU1	Gene names	FLRT1
Domain Architecture
Description	Leucine-rich repeat transmembrane protein FLRT1 precursor (Fibronectin-like domain-containing leucine-rich transmembrane protein 1).

GSCL_HUMAN
θ value	0.0563607 (rank : 99)	NC score	0.254209 (rank : 83)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	194
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

HLX1_MOUSE
θ value	0.0563607 (rank : 100)	NC score	0.264174 (rank : 60)
Query Neighborhood Hits	354	Target Neighborhood Hits	362	Shared Neighborhood Hits	204
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

HME2_HUMAN
θ value	0.0563607 (rank : 101)	NC score	0.240018 (rank : 110)
Query Neighborhood Hits	354	Target Neighborhood Hits	355	Shared Neighborhood Hits	209
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HME2_MOUSE
θ value	0.0563607 (rank : 102)	NC score	0.240329 (rank : 109)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	209
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

LMX1A_HUMAN
θ value	0.0563607 (rank : 103)	NC score	0.189579 (rank : 228)
Query Neighborhood Hits	354	Target Neighborhood Hits	406	Shared Neighborhood Hits	192
SwissProt Accessions	Q8TE12, Q8TE11	Gene names	LMX1A
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

LMX1A_MOUSE
θ value	0.0563607 (rank : 104)	NC score	0.189993 (rank : 225)
Query Neighborhood Hits	354	Target Neighborhood Hits	405	Shared Neighborhood Hits	191
SwissProt Accessions	Q9JKU8	Gene names	Lmx1a
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

MUC1_HUMAN
θ value	0.0563607 (rank : 105)	NC score	0.075298 (rank : 359)
Query Neighborhood Hits	354	Target Neighborhood Hits	975	Shared Neighborhood Hits	89
SwissProt Accessions	P15941, P13931, P15942, P17626, Q14128, Q14876, Q16437, Q16442, Q16615, Q9BXA4, Q9UE75, Q9UE76, Q9UQL1, Q9Y4J2	Gene names	MUC1
Domain Architecture
Description	Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut- reactive urinary mucin) (PUM) (Breast carcinoma-associated antigen DF3) (CD227 antigen).

MUC2_HUMAN
θ value	0.0563607 (rank : 106)	NC score	0.071077 (rank : 367)
Query Neighborhood Hits	354	Target Neighborhood Hits	906	Shared Neighborhood Hits	78
SwissProt Accessions	Q02817, Q14878	Gene names	MUC2, SMUC
Domain Architecture
Description	Mucin-2 precursor (Intestinal mucin-2).

PI5PA_HUMAN
θ value	0.0563607 (rank : 107)	NC score	0.064844 (rank : 383)
Query Neighborhood Hits	354	Target Neighborhood Hits	749	Shared Neighborhood Hits	82
SwissProt Accessions	Q15735, Q32M61, Q6ZTH6, Q8N902, Q9UDT9	Gene names	PIB5PA, PIPP
Domain Architecture
Description	Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC 3.1.3.56).

TAF4_HUMAN
θ value	0.0563607 (rank : 108)	NC score	0.089042 (rank : 346)
Query Neighborhood Hits	354	Target Neighborhood Hits	687	Shared Neighborhood Hits	65
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

BARX1_MOUSE
θ value	0.0736092 (rank : 109)	NC score	0.224647 (rank : 134)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	192
SwissProt Accessions	Q9ER42, O09066, P70159, Q9ERV2	Gene names	Barx1
Domain Architecture
Description	Homeobox protein BarH-like 1.

DLX3_MOUSE
θ value	0.0736092 (rank : 110)	NC score	0.260488 (rank : 66)
Query Neighborhood Hits	354	Target Neighborhood Hits	367	Shared Neighborhood Hits	207
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

DUX1_HUMAN
θ value	0.0736092 (rank : 111)	NC score	0.285236 (rank : 50)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	198
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX5_HUMAN
θ value	0.0736092 (rank : 112)	NC score	0.285025 (rank : 51)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	198
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

HCFC1_HUMAN
θ value	0.0736092 (rank : 113)	NC score	0.070922 (rank : 369)
Query Neighborhood Hits	354	Target Neighborhood Hits	331	Shared Neighborhood Hits	41
SwissProt Accessions	P51610, Q6P4G5	Gene names	HCFC1, HCF1
Domain Architecture	No domain graphic available
Description	Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory protein) (VCAF) (CFF) [Contains: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF C-terminal chain 1; HCF C- terminal chain 2; HCF C-terminal chain 3; HCF C-terminal chain 4; HCF C-terminal chain 5; HCF C-terminal chain 6].

HCFC1_MOUSE
θ value	0.0736092 (rank : 114)	NC score	0.066746 (rank : 377)
Query Neighborhood Hits	354	Target Neighborhood Hits	348	Shared Neighborhood Hits	40
SwissProt Accessions	Q61191, Q684R1, Q7TSB0, Q8C2D0, Q9QWH2	Gene names	Hcfc1
Domain Architecture	No domain graphic available
Description	Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N- terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF C-terminal chain 1; HCF C-terminal chain 2; HCF C-terminal chain 3; HCF C-terminal chain 4; HCF C-terminal chain 5; HCF C-terminal chain 6].

HXB1_MOUSE
θ value	0.0736092 (rank : 115)	NC score	0.223379 (rank : 136)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	198
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

NKX28_HUMAN
θ value	0.0736092 (rank : 116)	NC score	0.247489 (rank : 93)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	211
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

NKX28_MOUSE
θ value	0.0736092 (rank : 117)	NC score	0.240005 (rank : 111)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	209
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

PRAX_HUMAN
θ value	0.0736092 (rank : 118)	NC score	0.083688 (rank : 349)
Query Neighborhood Hits	354	Target Neighborhood Hits	215	Shared Neighborhood Hits	28
SwissProt Accessions	Q9BXM0, Q9BXL9, Q9HCF2	Gene names	PRX, KIAA1620
Domain Architecture
Description	Periaxin.

DCR1A_MOUSE
θ value	0.0961366 (rank : 119)	NC score	0.032422 (rank : 444)
Query Neighborhood Hits	354	Target Neighborhood Hits	59	Shared Neighborhood Hits	3
SwissProt Accessions	Q9JIC3, Q571H5, Q6GQR6	Gene names	Dclre1a, Kiaa0086, Snm1, Snm1a
Domain Architecture	No domain graphic available
Description	DNA cross-link repair 1A protein.

DLX2_HUMAN
θ value	0.0961366 (rank : 120)	NC score	0.258622 (rank : 71)
Query Neighborhood Hits	354	Target Neighborhood Hits	355	Shared Neighborhood Hits	206
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

DLX2_MOUSE
θ value	0.0961366 (rank : 121)	NC score	0.258035 (rank : 73)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	206
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

TCF8_MOUSE
θ value	0.0961366 (rank : 122)	NC score	0.014579 (rank : 479)
Query Neighborhood Hits	354	Target Neighborhood Hits	1067	Shared Neighborhood Hits	49
SwissProt Accessions	Q64318, Q62519	Gene names	Tcf8, Zfhx1a, Zfx1a, Zfx1ha
Domain Architecture
Description	Transcription factor 8 (Zinc finger homeobox protein 1a) (MEB1) (Delta EF1).

WNK2_HUMAN
θ value	0.125558 (rank : 123)	NC score	0.016693 (rank : 474)
Query Neighborhood Hits	354	Target Neighborhood Hits	1407	Shared Neighborhood Hits	75
SwissProt Accessions	Q9Y3S1, Q8IY36, Q9C0A3, Q9H3P4	Gene names	WNK2, KIAA1760, PRKWNK2
Domain Architecture
Description	Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2).

CDX1_HUMAN
θ value	0.163984 (rank : 124)	NC score	0.245767 (rank : 95)
Query Neighborhood Hits	354	Target Neighborhood Hits	382	Shared Neighborhood Hits	201
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX1_MOUSE
θ value	0.163984 (rank : 125)	NC score	0.250520 (rank : 90)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	202
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

DLX5_HUMAN
θ value	0.163984 (rank : 126)	NC score	0.258482 (rank : 72)
Query Neighborhood Hits	354	Target Neighborhood Hits	405	Shared Neighborhood Hits	208
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

HXC13_HUMAN
θ value	0.163984 (rank : 127)	NC score	0.242114 (rank : 103)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	202
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
θ value	0.163984 (rank : 128)	NC score	0.242115 (rank : 102)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	202
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

BARH1_HUMAN
θ value	0.21417 (rank : 129)	NC score	0.217623 (rank : 143)
Query Neighborhood Hits	354	Target Neighborhood Hits	373	Shared Neighborhood Hits	209
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARH1_MOUSE
θ value	0.21417 (rank : 130)	NC score	0.217363 (rank : 144)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	205
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

CRTC1_MOUSE
θ value	0.21417 (rank : 131)	NC score	0.065871 (rank : 380)
Query Neighborhood Hits	354	Target Neighborhood Hits	230	Shared Neighborhood Hits	38
SwissProt Accessions	Q68ED7, Q6ZQ85	Gene names	Crtc1, Kiaa0616, Mect1
Domain Architecture	No domain graphic available
Description	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1 homolog).

DLX5_MOUSE
θ value	0.21417 (rank : 132)	NC score	0.259316 (rank : 70)
Query Neighborhood Hits	354	Target Neighborhood Hits	434	Shared Neighborhood Hits	211
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

ONEC2_HUMAN
θ value	0.21417 (rank : 133)	NC score	0.154404 (rank : 311)
Query Neighborhood Hits	354	Target Neighborhood Hits	115	Shared Neighborhood Hits	76
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

ONEC2_MOUSE
θ value	0.21417 (rank : 134)	NC score	0.154441 (rank : 310)
Query Neighborhood Hits	354	Target Neighborhood Hits	123	Shared Neighborhood Hits	78
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

PRG4_HUMAN
θ value	0.21417 (rank : 135)	NC score	0.075837 (rank : 358)
Query Neighborhood Hits	354	Target Neighborhood Hits	764	Shared Neighborhood Hits	60
SwissProt Accessions	Q92954, Q6DNC4, Q6DNC5, Q6ZMZ5, Q9BX49	Gene names	PRG4, MSF, SZP
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

SPEG_MOUSE
θ value	0.21417 (rank : 136)	NC score	0.008254 (rank : 491)
Query Neighborhood Hits	354	Target Neighborhood Hits	1959	Shared Neighborhood Hits	82
SwissProt Accessions	Q62407, Q3TPH8, Q6P5V1, Q80TF7, Q80ZN0, Q8BZF4, Q9EQJ5	Gene names	Speg, Apeg1, Kiaa1297
Domain Architecture
Description	Striated muscle-specific serine/threonine protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

U689_HUMAN
θ value	0.21417 (rank : 137)	NC score	0.046419 (rank : 422)
Query Neighborhood Hits	354	Target Neighborhood Hits	26	Shared Neighborhood Hits	6
SwissProt Accessions	Q6UX39	Gene names	ames=UNQ689/PRO1329
Domain Architecture	No domain graphic available
Description	Protein UNQ689/PRO1329 precursor.

ZHX1_HUMAN
θ value	0.21417 (rank : 138)	NC score	0.222726 (rank : 139)
Query Neighborhood Hits	354	Target Neighborhood Hits	307	Shared Neighborhood Hits	166
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX1_MOUSE
θ value	0.21417 (rank : 139)	NC score	0.224400 (rank : 135)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	170
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

CCD96_MOUSE
θ value	0.279714 (rank : 140)	NC score	0.017538 (rank : 473)
Query Neighborhood Hits	354	Target Neighborhood Hits	704	Shared Neighborhood Hits	25
SwissProt Accessions	Q9CR92	Gene names	Ccdc96
Domain Architecture	No domain graphic available
Description	Coiled-coil domain-containing protein 96.

DUX3_HUMAN
θ value	0.279714 (rank : 141)	NC score	0.262241 (rank : 61)
Query Neighborhood Hits	354	Target Neighborhood Hits	312	Shared Neighborhood Hits	196
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

MDC1_HUMAN
θ value	0.279714 (rank : 142)	NC score	0.067184 (rank : 375)
Query Neighborhood Hits	354	Target Neighborhood Hits	1446	Shared Neighborhood Hits	87
SwissProt Accessions	Q14676, Q5JP55, Q5JP56, Q5ST83, Q68CQ3, Q86Z06, Q96QC2	Gene names	MDC1, KIAA0170, NFBD1
Domain Architecture	No domain graphic available
Description	Mediator of DNA damage checkpoint protein 1 (Nuclear factor with BRCT domains 1).

PROP1_HUMAN
θ value	0.279714 (rank : 143)	NC score	0.256382 (rank : 78)
Query Neighborhood Hits	354	Target Neighborhood Hits	354	Shared Neighborhood Hits	210
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

TSH2_HUMAN
θ value	0.279714 (rank : 144)	NC score	0.071688 (rank : 366)
Query Neighborhood Hits	354	Target Neighborhood Hits	479	Shared Neighborhood Hits	22
SwissProt Accessions	Q9NRE2, Q4VXM4, Q6N003, Q8N260	Gene names	TSHZ2, C20orf17, TSH2, ZNF218
Domain Architecture	No domain graphic available
Description	Teashirt homolog 2 (Zinc finger protein 218) (Ovarian cancer-related protein 10-2) (OVC10-2).

TSH2_MOUSE
θ value	0.279714 (rank : 145)	NC score	0.072038 (rank : 365)
Query Neighborhood Hits	354	Target Neighborhood Hits	467	Shared Neighborhood Hits	22
SwissProt Accessions	Q68FE9, Q5DTF1, Q6AXH5, Q9JL71	Gene names	Tshz2, Kiaa4248, Sdccag33l, Tsh2, Zfp218, Znf218
Domain Architecture	No domain graphic available
Description	Teashirt homolog 2 (Zinc finger protein 218) (SDCCAG33-like protein).

MLL3_HUMAN
θ value	0.365318 (rank : 146)	NC score	0.043344 (rank : 428)
Query Neighborhood Hits	354	Target Neighborhood Hits	1644	Shared Neighborhood Hits	87
SwissProt Accessions	Q8NEZ4, Q8NC02, Q8NDF6, Q9H9P4, Q9NR13, Q9P222, Q9UDR7	Gene names	MLL3, HALR, KIAA1506
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (EC 2.1.1.43) (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (Homologous to ALR protein).

NFAC1_HUMAN
θ value	0.365318 (rank : 147)	NC score	0.030868 (rank : 447)
Query Neighborhood Hits	354	Target Neighborhood Hits	312	Shared Neighborhood Hits	41
SwissProt Accessions	O95644, Q12865, Q15793	Gene names	NFATC1, NFAT2, NFATC
Domain Architecture
Description	Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT transcription complex cytosolic component) (NF-ATc1) (NF-ATc).

NKX22_HUMAN
θ value	0.365318 (rank : 148)	NC score	0.233937 (rank : 121)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	198
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX22_MOUSE
θ value	0.365318 (rank : 149)	NC score	0.234541 (rank : 115)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	201
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX25_MOUSE
θ value	0.365318 (rank : 150)	NC score	0.234383 (rank : 116)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	201
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX61_MOUSE
θ value	0.365318 (rank : 151)	NC score	0.256729 (rank : 76)
Query Neighborhood Hits	354	Target Neighborhood Hits	439	Shared Neighborhood Hits	218
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

PEPP1_HUMAN
θ value	0.365318 (rank : 152)	NC score	0.261752 (rank : 63)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	195
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

PROP1_MOUSE
θ value	0.365318 (rank : 153)	NC score	0.256675 (rank : 77)
Query Neighborhood Hits	354	Target Neighborhood Hits	361	Shared Neighborhood Hits	209
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

TSH3_HUMAN
θ value	0.365318 (rank : 154)	NC score	0.071074 (rank : 368)
Query Neighborhood Hits	354	Target Neighborhood Hits	564	Shared Neighborhood Hits	29
SwissProt Accessions	Q63HK5, Q9H0G6, Q9P254	Gene names	TSHZ3, KIAA1474, TSH3, ZNF537
Domain Architecture	No domain graphic available
Description	Teashirt homolog 3 (Zinc finger protein 537).

TSH3_MOUSE
θ value	0.365318 (rank : 155)	NC score	0.072485 (rank : 364)
Query Neighborhood Hits	354	Target Neighborhood Hits	590	Shared Neighborhood Hits	31
SwissProt Accessions	Q8CGV9, Q5DTX4	Gene names	Tshz3, Kiaa1474, Tsh3, Zfp537, Znf537
Domain Architecture	No domain graphic available
Description	Teashirt homolog 3 (Zinc finger protein 537).

CK024_MOUSE
θ value	0.47712 (rank : 156)	NC score	0.060079 (rank : 393)
Query Neighborhood Hits	354	Target Neighborhood Hits	307	Shared Neighborhood Hits	46
SwissProt Accessions	Q9D8N1, Q8VCP2	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C11orf24 homolog precursor.

EMX1_HUMAN
θ value	0.47712 (rank : 157)	NC score	0.226082 (rank : 130)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	206
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

GSH2_HUMAN
θ value	0.47712 (rank : 158)	NC score	0.196886 (rank : 198)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	195
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

PAX3_MOUSE
θ value	0.47712 (rank : 159)	NC score	0.204260 (rank : 184)
Query Neighborhood Hits	354	Target Neighborhood Hits	478	Shared Neighborhood Hits	221
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

UPK3B_HUMAN
θ value	0.47712 (rank : 160)	NC score	0.039435 (rank : 434)
Query Neighborhood Hits	354	Target Neighborhood Hits	29	Shared Neighborhood Hits	5
SwissProt Accessions	Q9BT76, Q86W06	Gene names	UPK3B
Domain Architecture	No domain graphic available
Description	Uroplakin-3B precursor (Uroplakin IIIb) (UPIIIb) (p35).

CSKI1_HUMAN
θ value	0.62314 (rank : 161)	NC score	0.022957 (rank : 462)
Query Neighborhood Hits	354	Target Neighborhood Hits	997	Shared Neighborhood Hits	62
SwissProt Accessions	Q8WXD9, Q9P2P0	Gene names	CASKIN1, KIAA1306
Domain Architecture	No domain graphic available
Description	Caskin-1 (CASK-interacting protein 1).

CTND2_MOUSE
θ value	0.62314 (rank : 162)	NC score	0.025109 (rank : 457)
Query Neighborhood Hits	354	Target Neighborhood Hits	227	Shared Neighborhood Hits	26
SwissProt Accessions	O35927	Gene names	Ctnnd2, Catnd2, Nprap
Domain Architecture
Description	Catenin delta-2 (Neural plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin).

HNF6_HUMAN
θ value	0.62314 (rank : 163)	NC score	0.149554 (rank : 321)
Query Neighborhood Hits	354	Target Neighborhood Hits	127	Shared Neighborhood Hits	81
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HNF6_MOUSE
θ value	0.62314 (rank : 164)	NC score	0.151921 (rank : 317)
Query Neighborhood Hits	354	Target Neighborhood Hits	124	Shared Neighborhood Hits	82
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

LHX4_HUMAN
θ value	0.62314 (rank : 165)	NC score	0.210348 (rank : 165)
Query Neighborhood Hits	354	Target Neighborhood Hits	455	Shared Neighborhood Hits	210
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX4_MOUSE
θ value	0.62314 (rank : 166)	NC score	0.208490 (rank : 172)
Query Neighborhood Hits	354	Target Neighborhood Hits	457	Shared Neighborhood Hits	210
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

NKX12_MOUSE
θ value	0.62314 (rank : 167)	NC score	0.215295 (rank : 152)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	191
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

NKX25_HUMAN
θ value	0.62314 (rank : 168)	NC score	0.232057 (rank : 123)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	203
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

PTN23_HUMAN
θ value	0.62314 (rank : 169)	NC score	0.026113 (rank : 455)
Query Neighborhood Hits	354	Target Neighborhood Hits	646	Shared Neighborhood Hits	53
SwissProt Accessions	Q9H3S7, Q7KZF8, Q8N6Z5, Q9BSR5, Q9P257, Q9UG03, Q9UMZ4	Gene names	PTPN23, KIAA1471
Domain Architecture	No domain graphic available
Description	Tyrosine-protein phosphatase non-receptor type 23 (EC 3.1.3.48) (His- domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14).

SMRC2_HUMAN
θ value	0.62314 (rank : 170)	NC score	0.034192 (rank : 441)
Query Neighborhood Hits	354	Target Neighborhood Hits	499	Shared Neighborhood Hits	32
SwissProt Accessions	Q8TAQ2, Q92923, Q96E12, Q96GY4	Gene names	SMARCC2, BAF170
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170).

TGIF_HUMAN
θ value	0.62314 (rank : 171)	NC score	0.336030 (rank : 47)
Query Neighborhood Hits	354	Target Neighborhood Hits	109	Shared Neighborhood Hits	66
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF_MOUSE
θ value	0.62314 (rank : 172)	NC score	0.345410 (rank : 46)
Query Neighborhood Hits	354	Target Neighborhood Hits	125	Shared Neighborhood Hits	72
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

CTND2_HUMAN
θ value	0.813845 (rank : 173)	NC score	0.027680 (rank : 454)
Query Neighborhood Hits	354	Target Neighborhood Hits	333	Shared Neighborhood Hits	44
SwissProt Accessions	Q9UQB3, O00379, O15390, O43206, O43840, Q13589, Q9UM66, Q9UPM3	Gene names	CTNND2, NPRAP
Domain Architecture
Description	Catenin delta-2 (Delta-catenin) (Neural plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin) (GT24).

DLX1_HUMAN
θ value	0.813845 (rank : 174)	NC score	0.257257 (rank : 75)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	208
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_MOUSE
θ value	0.813845 (rank : 175)	NC score	0.257833 (rank : 74)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	208
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

EPN1_MOUSE
θ value	0.813845 (rank : 176)	NC score	0.035434 (rank : 440)
Query Neighborhood Hits	354	Target Neighborhood Hits	240	Shared Neighborhood Hits	40
SwissProt Accessions	Q80VP1, O70446	Gene names	Epn1
Domain Architecture
Description	Epsin-1 (EPS-15-interacting protein 1) (Intersectin-EH-binding protein 1) (Ibp1).

LHX3_HUMAN
θ value	0.813845 (rank : 177)	NC score	0.196837 (rank : 199)
Query Neighborhood Hits	354	Target Neighborhood Hits	474	Shared Neighborhood Hits	220
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

LHX3_MOUSE
θ value	0.813845 (rank : 178)	NC score	0.191384 (rank : 223)
Query Neighborhood Hits	354	Target Neighborhood Hits	451	Shared Neighborhood Hits	209
SwissProt Accessions	P50481, Q61800, Q61801	Gene names	Lhx3, Lim-3, Lim3, Plim
Domain Architecture
Description	LIM/homeobox protein Lhx3 (Homeobox protein LIM-3) (Homeobox protein P-LIM) (LIM homeobox protein 3).

MAP1A_HUMAN
θ value	0.813845 (rank : 179)	NC score	0.029719 (rank : 449)
Query Neighborhood Hits	354	Target Neighborhood Hits	1626	Shared Neighborhood Hits	69
SwissProt Accessions	P78559, O95643, Q12973, Q15882, Q9UJT4	Gene names	MAP1A
Domain Architecture
Description	Microtubule-associated protein 1A (MAP 1A) (Proliferation-related protein p80) [Contains: MAP1 light chain LC2].

NKX61_HUMAN
θ value	0.813845 (rank : 180)	NC score	0.246919 (rank : 94)
Query Neighborhood Hits	354	Target Neighborhood Hits	431	Shared Neighborhood Hits	220
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

TSH1_HUMAN
θ value	0.813845 (rank : 181)	NC score	0.065903 (rank : 379)
Query Neighborhood Hits	354	Target Neighborhood Hits	558	Shared Neighborhood Hits	24
SwissProt Accessions	Q6ZSZ6, O60534, Q4LE29, Q53EU4	Gene names	TSHZ1, SDCCAG33, TSH1
Domain Architecture	No domain graphic available
Description	Teashirt homolog 1 (Serologically defined colon cancer antigen 3) (Antigen NY-CO-33).

TSH1_MOUSE
θ value	0.813845 (rank : 182)	NC score	0.069855 (rank : 372)
Query Neighborhood Hits	354	Target Neighborhood Hits	675	Shared Neighborhood Hits	30
SwissProt Accessions	Q5DTH5, Q6PE60, Q8VD19, Q9JLD5	Gene names	Tshz1, Kiaa4206, Sdccag33, Tsh1
Domain Architecture	No domain graphic available
Description	Teashirt homolog 1 (Serologically defined colon cancer antigen 3 homolog).

ATBF1_HUMAN
θ value	1.06291 (rank : 183)	NC score	0.151730 (rank : 318)
Query Neighborhood Hits	354	Target Neighborhood Hits	1547	Shared Neighborhood Hits	261
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ATBF1_MOUSE
θ value	1.06291 (rank : 184)	NC score	0.151288 (rank : 319)
Query Neighborhood Hits	354	Target Neighborhood Hits	1841	Shared Neighborhood Hits	274
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

BARX2_HUMAN
θ value	1.06291 (rank : 185)	NC score	0.231242 (rank : 124)
Query Neighborhood Hits	354	Target Neighborhood Hits	387	Shared Neighborhood Hits	206
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

BAT3_HUMAN
θ value	1.06291 (rank : 186)	NC score	0.045917 (rank : 424)
Query Neighborhood Hits	354	Target Neighborhood Hits	490	Shared Neighborhood Hits	47
SwissProt Accessions	P46379, O95874, Q5SQ35, Q5SQ36, Q5SQ37, Q5SRP8, Q96SA6, Q9BCN4	Gene names	BAT3, G3
Domain Architecture
Description	Large proline-rich protein BAT3 (HLA-B-associated transcript 3) (Protein G3).

DLX6_HUMAN
θ value	1.06291 (rank : 187)	NC score	0.259638 (rank : 69)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	211
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

DOT1L_HUMAN
θ value	1.06291 (rank : 188)	NC score	0.056769 (rank : 403)
Query Neighborhood Hits	354	Target Neighborhood Hits	660	Shared Neighborhood Hits	66
SwissProt Accessions	Q8TEK3, O60379, Q96JL1	Gene names	DOT1L, KIAA1814
Domain Architecture	No domain graphic available
Description	Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein).

GSCL_MOUSE
θ value	1.06291 (rank : 189)	NC score	0.251850 (rank : 85)
Query Neighborhood Hits	354	Target Neighborhood Hits	339	Shared Neighborhood Hits	196
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

GSC_HUMAN
θ value	1.06291 (rank : 190)	NC score	0.241939 (rank : 105)
Query Neighborhood Hits	354	Target Neighborhood Hits	369	Shared Neighborhood Hits	210
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

HXB2_MOUSE
θ value	1.06291 (rank : 191)	NC score	0.179762 (rank : 244)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	190
SwissProt Accessions	P0C1T1	Gene names	Hoxb2, Hox-2.8
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-B2 (Hox-2.8).

NKX23_HUMAN
θ value	1.06291 (rank : 192)	NC score	0.229321 (rank : 125)
Query Neighborhood Hits	354	Target Neighborhood Hits	346	Shared Neighborhood Hits	205
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

NKX23_MOUSE
θ value	1.06291 (rank : 193)	NC score	0.228858 (rank : 128)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	201
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

OBF1_HUMAN
θ value	1.06291 (rank : 194)	NC score	0.055320 (rank : 406)
Query Neighborhood Hits	354	Target Neighborhood Hits	203	Shared Neighborhood Hits	30
SwissProt Accessions	Q16633, Q14983	Gene names	POU2AF1, OBF1
Domain Architecture	No domain graphic available
Description	POU domain class 2-associating factor 1 (B-cell-specific coactivator OBF-1) (OCT-binding factor 1) (BOB-1) (OCA-B).

PO2F2_MOUSE
θ value	1.06291 (rank : 195)	NC score	0.099272 (rank : 342)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	185
SwissProt Accessions	Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q61995, Q61996, Q64245	Gene names	Pou2f2, Oct2, Otf2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

SEN2_HUMAN
θ value	1.06291 (rank : 196)	NC score	0.024758 (rank : 458)
Query Neighborhood Hits	354	Target Neighborhood Hits	13	Shared Neighborhood Hits	2
SwissProt Accessions	Q8NCE0, Q8WTW7, Q9BPU7	Gene names	TSEN2, SEN2
Domain Architecture	No domain graphic available
Description	tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) (HsSen2 protein).

ZN207_HUMAN
θ value	1.06291 (rank : 197)	NC score	0.069586 (rank : 373)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	36
SwissProt Accessions	O43670, Q96HW5, Q9BUQ7	Gene names	ZNF207
Domain Architecture	No domain graphic available
Description	Zinc finger protein 207.

BARH2_HUMAN
θ value	1.38821 (rank : 198)	NC score	0.222823 (rank : 137)
Query Neighborhood Hits	354	Target Neighborhood Hits	419	Shared Neighborhood Hits	208
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

BARH2_MOUSE
θ value	1.38821 (rank : 199)	NC score	0.222671 (rank : 140)
Query Neighborhood Hits	354	Target Neighborhood Hits	397	Shared Neighborhood Hits	206
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

BARX2_MOUSE
θ value	1.38821 (rank : 200)	NC score	0.227188 (rank : 129)
Query Neighborhood Hits	354	Target Neighborhood Hits	335	Shared Neighborhood Hits	202
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

CRTC1_HUMAN
θ value	1.38821 (rank : 201)	NC score	0.060272 (rank : 392)
Query Neighborhood Hits	354	Target Neighborhood Hits	319	Shared Neighborhood Hits	41
SwissProt Accessions	Q6UUV9, O75114, Q6Y3A3, Q7LDZ2, Q8IUL3, Q8IZ34, Q8IZL1, Q8N6W3, Q96AI8, Q9H801	Gene names	CRTC1, KIAA0616, MECT1, TORC1, WAMTP1
Domain Architecture	No domain graphic available
Description	CREB-regulated transcription coactivator 1 (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) (Mucoepidermoid carcinoma translocated protein 1).

EMX2_HUMAN
θ value	1.38821 (rank : 202)	NC score	0.234057 (rank : 120)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	207
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_MOUSE
θ value	1.38821 (rank : 203)	NC score	0.234324 (rank : 117)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	207
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

GLI1_HUMAN
θ value	1.38821 (rank : 204)	NC score	0.000137 (rank : 504)
Query Neighborhood Hits	354	Target Neighborhood Hits	828	Shared Neighborhood Hits	28
SwissProt Accessions	P08151, Q8TDN9	Gene names	GLI1, GLI
Domain Architecture	No domain graphic available
Description	Zinc finger protein GLI1 (Glioma-associated oncogene) (Oncogene GLI).

GRIP1_MOUSE
θ value	1.38821 (rank : 205)	NC score	0.008278 (rank : 490)
Query Neighborhood Hits	354	Target Neighborhood Hits	241	Shared Neighborhood Hits	6
SwissProt Accessions	Q925T6, Q8BLQ3, Q8C0T3, Q925T5, Q925T7	Gene names	Grip1
Domain Architecture
Description	Glutamate receptor-interacting protein 1 (GRIP1 protein).

HOP_MOUSE
θ value	1.38821 (rank : 206)	NC score	0.114803 (rank : 330)
Query Neighborhood Hits	354	Target Neighborhood Hits	102	Shared Neighborhood Hits	64
SwissProt Accessions	Q8R1H0, Q8C1N5, Q8CJ22	Gene names	Hop, Hod, Ob1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Homeobox-only protein) (Odd homeobox protein 1) (mOB1).

MBN3_HUMAN
θ value	1.38821 (rank : 207)	NC score	0.028898 (rank : 451)
Query Neighborhood Hits	354	Target Neighborhood Hits	61	Shared Neighborhood Hits	4
SwissProt Accessions	Q9NUK0, Q5JXN8, Q5JXN9, Q5JXP4, Q6UDQ1, Q8TAD9, Q8TAF4, Q9H0Z7, Q9UF37	Gene names	MBNL3, CHCR, MBLX39, MBXL
Domain Architecture
Description	Muscleblind-like X-linked protein (Muscleblind-like protein 3) (Cys3His CCG1-required protein) (Protein HCHCR).

NOTC1_HUMAN
θ value	1.38821 (rank : 208)	NC score	0.000483 (rank : 503)
Query Neighborhood Hits	354	Target Neighborhood Hits	906	Shared Neighborhood Hits	16
SwissProt Accessions	P46531	Gene names	NOTCH1, TAN1
Domain Architecture
Description	Neurogenic locus notch homolog protein 1 precursor (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain].

OTX1_HUMAN
θ value	1.38821 (rank : 209)	NC score	0.216625 (rank : 145)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	209
SwissProt Accessions	P32242, Q53TG6	Gene names	OTX1
Domain Architecture
Description	Homeobox protein OTX1.

PAX3_HUMAN
θ value	1.38821 (rank : 210)	NC score	0.205203 (rank : 182)
Query Neighborhood Hits	354	Target Neighborhood Hits	513	Shared Neighborhood Hits	224
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PHLB1_HUMAN
θ value	1.38821 (rank : 211)	NC score	0.032968 (rank : 443)
Query Neighborhood Hits	354	Target Neighborhood Hits	1038	Shared Neighborhood Hits	57
SwissProt Accessions	Q86UU1, O75133, Q4KMF8, Q8TEQ2	Gene names	PHLDB1, DLNB07, KIAA0638, LL5A
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 1 (Protein LL5-alpha).

SFPQ_MOUSE
θ value	1.38821 (rank : 212)	NC score	0.036626 (rank : 439)
Query Neighborhood Hits	354	Target Neighborhood Hits	958	Shared Neighborhood Hits	60
SwissProt Accessions	Q8VIJ6, Q9ERW2	Gene names	Sfpq
Domain Architecture	No domain graphic available
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).

SIP1_MOUSE
θ value	1.38821 (rank : 213)	NC score	0.015570 (rank : 475)
Query Neighborhood Hits	354	Target Neighborhood Hits	870	Shared Neighborhood Hits	42
SwissProt Accessions	Q9R0G7	Gene names	Zfhx1b, Sip1, Zfx1b
Domain Architecture
Description	Zinc finger homeobox protein 1b (Smad-interacting protein 1).

SON_MOUSE
θ value	1.38821 (rank : 214)	NC score	0.088819 (rank : 347)
Query Neighborhood Hits	354	Target Neighborhood Hits	957	Shared Neighborhood Hits	74
SwissProt Accessions	Q9QX47, Q9CQ12, Q9CQK6, Q9QXP5	Gene names	Son
Domain Architecture
Description	SON protein.

YTHD2_HUMAN
θ value	1.38821 (rank : 215)	NC score	0.017968 (rank : 471)
Query Neighborhood Hits	354	Target Neighborhood Hits	89	Shared Neighborhood Hits	12
SwissProt Accessions	Q9Y5A9, Q5VSZ9, Q8TDH0, Q9BUJ5	Gene names	YTHDF2, HGRG8
Domain Architecture
Description	YTH domain family protein 2 (High-glucose-regulated protein 8) (NY- REN-2 antigen) (CLL-associated antigen KW-14).

CO7A1_HUMAN
θ value	1.81305 (rank : 216)	NC score	0.014691 (rank : 478)
Query Neighborhood Hits	354	Target Neighborhood Hits	807	Shared Neighborhood Hits	51
SwissProt Accessions	Q02388, Q14054, Q16507	Gene names	COL7A1
Domain Architecture
Description	Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen).

CSMD3_HUMAN
θ value	1.81305 (rank : 217)	NC score	0.004290 (rank : 498)
Query Neighborhood Hits	354	Target Neighborhood Hits	199	Shared Neighborhood Hits	7
SwissProt Accessions	Q7Z407, Q96PZ3	Gene names	CSMD3, KIAA1894
Domain Architecture
Description	CUB and sushi domain-containing protein 3 precursor (CUB and sushi multiple domains protein 3).

FLNA_HUMAN
θ value	1.81305 (rank : 218)	NC score	0.011921 (rank : 483)
Query Neighborhood Hits	354	Target Neighborhood Hits	138	Shared Neighborhood Hits	6
SwissProt Accessions	P21333	Gene names	FLNA, FLN, FLN1
Domain Architecture
Description	Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial actin-binding protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle filamin).

FLNA_MOUSE
θ value	1.81305 (rank : 219)	NC score	0.012044 (rank : 482)
Query Neighborhood Hits	354	Target Neighborhood Hits	142	Shared Neighborhood Hits	6
SwissProt Accessions	Q8BTM8, O54934, Q7TQI1, Q8BLK1, Q8BTN7, Q8VHX5, Q8VHX8, Q99KQ2	Gene names	Flna, Fln, Fln1
Domain Architecture
Description	Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial actin-binding protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle filamin).

GSH2_MOUSE
θ value	1.81305 (rank : 220)	NC score	0.193859 (rank : 210)
Query Neighborhood Hits	354	Target Neighborhood Hits	319	Shared Neighborhood Hits	194
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HMX2_MOUSE
θ value	1.81305 (rank : 221)	NC score	0.220818 (rank : 142)
Query Neighborhood Hits	354	Target Neighborhood Hits	354	Shared Neighborhood Hits	204
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

K0240_MOUSE
θ value	1.81305 (rank : 222)	NC score	0.046379 (rank : 423)
Query Neighborhood Hits	354	Target Neighborhood Hits	211	Shared Neighborhood Hits	26
SwissProt Accessions	Q8CHH5	Gene names	Kiaa0240
Domain Architecture	No domain graphic available
Description	Protein KIAA0240.

LMX1B_HUMAN
θ value	1.81305 (rank : 223)	NC score	0.175351 (rank : 253)
Query Neighborhood Hits	354	Target Neighborhood Hits	404	Shared Neighborhood Hits	189
SwissProt Accessions	O60663, O75463	Gene names	LMX1B
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LMX1B_MOUSE
θ value	1.81305 (rank : 224)	NC score	0.174521 (rank : 256)
Query Neighborhood Hits	354	Target Neighborhood Hits	394	Shared Neighborhood Hits	186
SwissProt Accessions	O88609	Gene names	Lmx1b
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

NUMBL_HUMAN
θ value	1.81305 (rank : 225)	NC score	0.044023 (rank : 427)
Query Neighborhood Hits	354	Target Neighborhood Hits	394	Shared Neighborhood Hits	47
SwissProt Accessions	Q9Y6R0, Q7Z4J9	Gene names	NUMBL
Domain Architecture
Description	Numb-like protein (Numb-R).

PCLO_MOUSE
θ value	1.81305 (rank : 226)	NC score	0.051747 (rank : 413)
Query Neighborhood Hits	354	Target Neighborhood Hits	2275	Shared Neighborhood Hits	115
SwissProt Accessions	Q9QYX7, Q8CF91, Q8CF92, Q9QYX6, Q9QZJ0	Gene names	Pclo, Acz
Domain Architecture
Description	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein) (Brain-derived HLMN protein).

TPO_MOUSE
θ value	1.81305 (rank : 227)	NC score	0.058843 (rank : 400)
Query Neighborhood Hits	354	Target Neighborhood Hits	258	Shared Neighborhood Hits	27
SwissProt Accessions	P40226	Gene names	Thpo
Domain Architecture
Description	Thrombopoietin precursor (Megakaryocyte colony-stimulating factor) (Myeloproliferative leukemia virus oncogene ligand) (C-mpl ligand) (ML) (Megakaryocyte growth and development factor) (MGDF).

ZN516_MOUSE
θ value	1.81305 (rank : 228)	NC score	0.004309 (rank : 497)
Query Neighborhood Hits	354	Target Neighborhood Hits	1197	Shared Neighborhood Hits	56
SwissProt Accessions	Q7TSH3	Gene names	Znf516, Kiaa0222, Zfp516
Domain Architecture
Description	Zinc finger protein 516.

CO002_HUMAN
θ value	2.36792 (rank : 229)	NC score	0.070076 (rank : 371)
Query Neighborhood Hits	354	Target Neighborhood Hits	387	Shared Neighborhood Hits	49
SwissProt Accessions	Q9NZP6	Gene names	C15orf2
Domain Architecture	No domain graphic available
Description	Protein C15orf2.

CP007_MOUSE
θ value	2.36792 (rank : 230)	NC score	0.043292 (rank : 429)
Query Neighborhood Hits	354	Target Neighborhood Hits	231	Shared Neighborhood Hits	24
SwissProt Accessions	Q8C190, Q6PFD1	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C16orf7 homolog (5-day ovary-specific transcript 1 protein).

CSPG5_MOUSE
θ value	2.36792 (rank : 231)	NC score	0.028939 (rank : 450)
Query Neighborhood Hits	354	Target Neighborhood Hits	211	Shared Neighborhood Hits	16
SwissProt Accessions	Q71M36, Q71M37, Q7TNT8, Q8BPJ5, Q9QY32	Gene names	Cspg5, Caleb, Ngc
Domain Architecture	No domain graphic available
Description	Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan C) (Acidic leucine-rich EGF-like domain-containing brain protein).

GP152_HUMAN
θ value	2.36792 (rank : 232)	NC score	0.019333 (rank : 469)
Query Neighborhood Hits	354	Target Neighborhood Hits	636	Shared Neighborhood Hits	39
SwissProt Accessions	Q8TDT2, Q86SM0	Gene names	GPR152, PGR5
Domain Architecture
Description	Probable G-protein coupled receptor 152 (G-protein coupled receptor PGR5).

GSC_MOUSE
θ value	2.36792 (rank : 233)	NC score	0.239878 (rank : 112)
Query Neighborhood Hits	354	Target Neighborhood Hits	368	Shared Neighborhood Hits	207
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

GTSE1_MOUSE
θ value	2.36792 (rank : 234)	NC score	0.028797 (rank : 452)
Query Neighborhood Hits	354	Target Neighborhood Hits	245	Shared Neighborhood Hits	27
SwissProt Accessions	Q8R080, O89015, Q9CSG9	Gene names	Gtse1, B99
Domain Architecture	No domain graphic available
Description	G2 and S phase expressed protein 1 (Gtse-1) (B99 protein).

HMX3_MOUSE
θ value	2.36792 (rank : 235)	NC score	0.222737 (rank : 138)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	196
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

LHX6_MOUSE
θ value	2.36792 (rank : 236)	NC score	0.169152 (rank : 273)
Query Neighborhood Hits	354	Target Neighborhood Hits	399	Shared Neighborhood Hits	187
SwissProt Accessions	O88706	Gene names	Lhx6
Domain Architecture
Description	LIM/homeobox protein Lhx6.

LHX9_HUMAN
θ value	2.36792 (rank : 237)	NC score	0.193072 (rank : 213)
Query Neighborhood Hits	354	Target Neighborhood Hits	444	Shared Neighborhood Hits	202
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX9_MOUSE
θ value	2.36792 (rank : 238)	NC score	0.192456 (rank : 218)
Query Neighborhood Hits	354	Target Neighborhood Hits	445	Shared Neighborhood Hits	202
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

TAF6_HUMAN
θ value	2.36792 (rank : 239)	NC score	0.040984 (rank : 430)
Query Neighborhood Hits	354	Target Neighborhood Hits	127	Shared Neighborhood Hits	29
SwissProt Accessions	P49848	Gene names	TAF6, TAF2E, TAFII70
Domain Architecture
Description	Transcription initiation factor TFIID subunit 6 (Transcription initiation factor TFIID 70 kDa subunit) (TAF(II)70) (TAFII-70) (TAFII- 80) (TAFII80).

TENX_HUMAN
θ value	2.36792 (rank : 240)	NC score	0.003960 (rank : 499)
Query Neighborhood Hits	354	Target Neighborhood Hits	789	Shared Neighborhood Hits	22
SwissProt Accessions	P22105, P78530, P78531, Q08424, Q9UMG7	Gene names	TNXB, HXBL, TNX, XB
Domain Architecture
Description	Tenascin-X precursor (TN-X) (Hexabrachion-like protein).

VAX1_HUMAN
θ value	2.36792 (rank : 241)	NC score	0.214322 (rank : 156)
Query Neighborhood Hits	354	Target Neighborhood Hits	355	Shared Neighborhood Hits	199
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX1_MOUSE
θ value	2.36792 (rank : 242)	NC score	0.213391 (rank : 160)
Query Neighborhood Hits	354	Target Neighborhood Hits	351	Shared Neighborhood Hits	199
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

ASPP2_HUMAN
θ value	3.0926 (rank : 243)	NC score	0.009706 (rank : 488)
Query Neighborhood Hits	354	Target Neighborhood Hits	1156	Shared Neighborhood Hits	31
SwissProt Accessions	Q13625, Q12892, Q86X75, Q96KQ3	Gene names	TP53BP2, ASPP2, BBP
Domain Architecture
Description	Apoptosis-stimulating of p53 protein 2 (Tumor suppressor p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen).

CN032_MOUSE
θ value	3.0926 (rank : 244)	NC score	0.053847 (rank : 409)
Query Neighborhood Hits	354	Target Neighborhood Hits	233	Shared Neighborhood Hits	36
SwissProt Accessions	Q8BH93, Q3TF12, Q3TGL0, Q8CC90	Gene names
Domain Architecture	No domain graphic available
Description	Protein C14orf32 homolog.

CTTB2_HUMAN
θ value	3.0926 (rank : 245)	NC score	0.004986 (rank : 495)
Query Neighborhood Hits	354	Target Neighborhood Hits	1061	Shared Neighborhood Hits	25
SwissProt Accessions	Q8WZ74, O43389, Q7LG11, Q9C0A5	Gene names	CTTNBP2, C7orf8, CORTBP2, KIAA1758
Domain Architecture	No domain graphic available
Description	Cortactin-binding protein 2 (CortBP2).

FCRLA_HUMAN
θ value	3.0926 (rank : 246)	NC score	0.014081 (rank : 480)
Query Neighborhood Hits	354	Target Neighborhood Hits	135	Shared Neighborhood Hits	11
SwissProt Accessions	Q7L513, Q5VXA1, Q5VXA2, Q5VXA3, Q5VXB0, Q8NEW4, Q8WXH3, Q96PC6, Q96PJ0, Q96PJ1, Q96PJ2, Q96PJ4, Q9BR57	Gene names	FCRLA, FCRL, FCRL1, FCRLM1, FCRX, FREB
Domain Architecture	No domain graphic available
Description	Fc receptor-like and mucin-like 1 precursor (Fc receptor-like A) (Fc receptor homolog expressed in B-cells) (Fc receptor-related protein X) (FcRX) (Fc receptor-like protein).

HXA3_HUMAN
θ value	3.0926 (rank : 247)	NC score	0.180477 (rank : 242)
Query Neighborhood Hits	354	Target Neighborhood Hits	535	Shared Neighborhood Hits	226
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXA3_MOUSE
θ value	3.0926 (rank : 248)	NC score	0.181924 (rank : 240)
Query Neighborhood Hits	354	Target Neighborhood Hits	558	Shared Neighborhood Hits	228
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

K0319_MOUSE
θ value	3.0926 (rank : 249)	NC score	0.020254 (rank : 467)
Query Neighborhood Hits	354	Target Neighborhood Hits	134	Shared Neighborhood Hits	14
SwissProt Accessions	Q5SZV5, Q80U39	Gene names	Kiaa0319
Domain Architecture	No domain graphic available
Description	Protein KIAA0319 precursor.

LR37A_HUMAN
θ value	3.0926 (rank : 250)	NC score	0.038849 (rank : 435)
Query Neighborhood Hits	354	Target Neighborhood Hits	720	Shared Neighborhood Hits	47
SwissProt Accessions	O60309, Q49A01, Q49A80, Q8NB33	Gene names	LRRC37A, KIAA0563
Domain Architecture	No domain graphic available
Description	Leucine-rich repeat-containing protein 37A.

MBD5_HUMAN
θ value	3.0926 (rank : 251)	NC score	0.027924 (rank : 453)
Query Neighborhood Hits	354	Target Neighborhood Hits	176	Shared Neighborhood Hits	22
SwissProt Accessions	Q9P267, Q9NUV6	Gene names	MBD5, KIAA1461
Domain Architecture	No domain graphic available
Description	Methyl-CpG-binding domain protein 5 (Methyl-CpG-binding protein MBD5).

MDC1_MOUSE
θ value	3.0926 (rank : 252)	NC score	0.059053 (rank : 399)
Query Neighborhood Hits	354	Target Neighborhood Hits	998	Shared Neighborhood Hits	73
SwissProt Accessions	Q5PSV9, Q5U4D3, Q6ZQH7	Gene names	Mdc1, Kiaa0170
Domain Architecture	No domain graphic available
Description	Mediator of DNA damage checkpoint protein 1.

MEOX1_MOUSE
θ value	3.0926 (rank : 253)	NC score	0.182411 (rank : 239)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	197
SwissProt Accessions	P32442	Gene names	Meox1, Mox-1, Mox1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

PAX4_HUMAN
θ value	3.0926 (rank : 254)	NC score	0.192787 (rank : 216)
Query Neighborhood Hits	354	Target Neighborhood Hits	367	Shared Neighborhood Hits	209
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

PGCA_MOUSE
θ value	3.0926 (rank : 255)	NC score	0.020503 (rank : 466)
Query Neighborhood Hits	354	Target Neighborhood Hits	643	Shared Neighborhood Hits	37
SwissProt Accessions	Q61282, Q64021	Gene names	Agc1, Agc
Domain Architecture
Description	Aggrecan core protein precursor (Cartilage-specific proteoglycan core protein) (CSPCP).

PO2F2_HUMAN
θ value	3.0926 (rank : 256)	NC score	0.097012 (rank : 343)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	189
SwissProt Accessions	P09086, Q16648, Q9BRS4	Gene names	POU2F2, OCT2, OTF2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PTPRJ_HUMAN
θ value	3.0926 (rank : 257)	NC score	0.005476 (rank : 494)
Query Neighborhood Hits	354	Target Neighborhood Hits	207	Shared Neighborhood Hits	6
SwissProt Accessions	Q12913, Q15255, Q8NHM2	Gene names	PTPRJ, DEP1
Domain Architecture
Description	Receptor-type tyrosine-protein phosphatase eta precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase eta) (R-PTP-eta) (HPTP eta) (Protein- tyrosine phosphatase receptor type J) (Density-enhanced phosphatase 1) (DEP-1) (CD148 antigen).

SFPQ_HUMAN
θ value	3.0926 (rank : 258)	NC score	0.032247 (rank : 445)
Query Neighborhood Hits	354	Target Neighborhood Hits	986	Shared Neighborhood Hits	60
SwissProt Accessions	P23246, P30808	Gene names	SFPQ, PSF
Domain Architecture
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).

TFE3_HUMAN
θ value	3.0926 (rank : 259)	NC score	0.011224 (rank : 484)
Query Neighborhood Hits	354	Target Neighborhood Hits	190	Shared Neighborhood Hits	7
SwissProt Accessions	P19532, Q92757, Q92758, Q99964	Gene names	TFE3
Domain Architecture
Description	Transcription factor E3.

CN155_HUMAN
θ value	4.03905 (rank : 260)	NC score	0.055669 (rank : 404)
Query Neighborhood Hits	354	Target Neighborhood Hits	385	Shared Neighborhood Hits	34
SwissProt Accessions	Q5H9T9, Q5H9U7, Q86YI2, Q9H0J3	Gene names	C14orf155
Domain Architecture	No domain graphic available
Description	Protein C14orf155.

CTDP1_HUMAN
θ value	4.03905 (rank : 261)	NC score	0.025361 (rank : 456)
Query Neighborhood Hits	354	Target Neighborhood Hits	416	Shared Neighborhood Hits	35
SwissProt Accessions	Q9Y5B0, Q7Z644, Q96BZ1, Q9Y6F5	Gene names	CTDP1, FCP1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

GNAS1_MOUSE
θ value	4.03905 (rank : 262)	NC score	0.024452 (rank : 459)
Query Neighborhood Hits	354	Target Neighborhood Hits	651	Shared Neighborhood Hits	59
SwissProt Accessions	Q6R0H7, Q6R0H4, Q6R0H5, Q6R2J5, Q9JJX0, Q9Z1N8	Gene names	Gnas, Gnas1
Domain Architecture	No domain graphic available
Description	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas (Adenylate cyclase-stimulating G alpha protein) (Extra large alphas protein) (XLalphas).

HXA9_HUMAN
θ value	4.03905 (rank : 263)	NC score	0.170889 (rank : 269)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	200
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA9_MOUSE
θ value	4.03905 (rank : 264)	NC score	0.171099 (rank : 267)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	200
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXC4_HUMAN
θ value	4.03905 (rank : 265)	NC score	0.165908 (rank : 282)
Query Neighborhood Hits	354	Target Neighborhood Hits	361	Shared Neighborhood Hits	202
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXD1_HUMAN
θ value	4.03905 (rank : 266)	NC score	0.189865 (rank : 226)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	198
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

HXD1_MOUSE
θ value	4.03905 (rank : 267)	NC score	0.195960 (rank : 206)
Query Neighborhood Hits	354	Target Neighborhood Hits	381	Shared Neighborhood Hits	196
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

LAMA5_HUMAN
θ value	4.03905 (rank : 268)	NC score	0.002753 (rank : 501)
Query Neighborhood Hits	354	Target Neighborhood Hits	976	Shared Neighborhood Hits	28
SwissProt Accessions	O15230, Q8WZA7, Q9H1P1	Gene names	LAMA5, KIAA0533, KIAA1907
Domain Architecture
Description	Laminin alpha-5 chain precursor.

LHX2_HUMAN
θ value	4.03905 (rank : 269)	NC score	0.196374 (rank : 203)
Query Neighborhood Hits	354	Target Neighborhood Hits	432	Shared Neighborhood Hits	206
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

LHX2_MOUSE
θ value	4.03905 (rank : 270)	NC score	0.198311 (rank : 194)
Query Neighborhood Hits	354	Target Neighborhood Hits	431	Shared Neighborhood Hits	206
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

NKX24_HUMAN
θ value	4.03905 (rank : 271)	NC score	0.232210 (rank : 122)
Query Neighborhood Hits	354	Target Neighborhood Hits	366	Shared Neighborhood Hits	200
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX24_MOUSE
θ value	4.03905 (rank : 272)	NC score	0.225137 (rank : 133)
Query Neighborhood Hits	354	Target Neighborhood Hits	356	Shared Neighborhood Hits	199
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

PO2F1_HUMAN
θ value	4.03905 (rank : 273)	NC score	0.108291 (rank : 334)
Query Neighborhood Hits	354	Target Neighborhood Hits	426	Shared Neighborhood Hits	211
SwissProt Accessions	P14859, Q5TBT7, Q6PK46, Q8NEU9, Q9BPV1	Gene names	POU2F1, OCT1, OTF1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

PRRX2_HUMAN
θ value	4.03905 (rank : 274)	NC score	0.216484 (rank : 147)
Query Neighborhood Hits	354	Target Neighborhood Hits	348	Shared Neighborhood Hits	197
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

PRRX2_MOUSE
θ value	4.03905 (rank : 275)	NC score	0.216147 (rank : 149)
Query Neighborhood Hits	354	Target Neighborhood Hits	351	Shared Neighborhood Hits	198
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

PUNC_MOUSE
θ value	4.03905 (rank : 276)	NC score	0.003432 (rank : 500)
Query Neighborhood Hits	354	Target Neighborhood Hits	501	Shared Neighborhood Hits	21
SwissProt Accessions	Q8BQC3, O70246, Q792T2, Q9Z2S6	Gene names	Punc
Domain Architecture	No domain graphic available
Description	Putative neuronal cell adhesion molecule precursor.

RGS3_MOUSE
θ value	4.03905 (rank : 277)	NC score	0.039969 (rank : 433)
Query Neighborhood Hits	354	Target Neighborhood Hits	1621	Shared Neighborhood Hits	102
SwissProt Accessions	Q9DC04, Q5SRB1, Q5SRB4, Q5SRB8, Q8CEE3, Q8VI25, Q925G9, Q9JL22, Q9JL23, Q9QXA2	Gene names	Rgs3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (C2PA).

RP1L1_HUMAN
θ value	4.03905 (rank : 278)	NC score	0.022402 (rank : 464)
Query Neighborhood Hits	354	Target Neighborhood Hits	1072	Shared Neighborhood Hits	61
SwissProt Accessions	Q8IWN7, Q86SQ1, Q8IWN8, Q8IWN9, Q8IWP0, Q8IWP1, Q8IWP2	Gene names	RP1L1
Domain Architecture
Description	Retinitis pigmentosa 1-like 1 protein.

TITF1_HUMAN
θ value	4.03905 (rank : 279)	NC score	0.236924 (rank : 113)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	197
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

TITF1_MOUSE
θ value	4.03905 (rank : 280)	NC score	0.235593 (rank : 114)
Query Neighborhood Hits	354	Target Neighborhood Hits	335	Shared Neighborhood Hits	197
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

BCL9_HUMAN
θ value	5.27518 (rank : 281)	NC score	0.038371 (rank : 437)
Query Neighborhood Hits	354	Target Neighborhood Hits	1008	Shared Neighborhood Hits	78
SwissProt Accessions	O00512	Gene names	BCL9
Domain Architecture	No domain graphic available
Description	B-cell lymphoma 9 protein (Bcl-9) (Legless homolog).

CIC_MOUSE
θ value	5.27518 (rank : 282)	NC score	0.040676 (rank : 432)
Query Neighborhood Hits	354	Target Neighborhood Hits	742	Shared Neighborhood Hits	69
SwissProt Accessions	Q924A2, Q6PDJ8, Q8CGE4, Q8CHH0, Q9CW61	Gene names	Cic, Kiaa0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

CRSP7_HUMAN
θ value	5.27518 (rank : 283)	NC score	0.017715 (rank : 472)
Query Neighborhood Hits	354	Target Neighborhood Hits	247	Shared Neighborhood Hits	16
SwissProt Accessions	O95402	Gene names	CRSP7, ARC70
Domain Architecture
Description	CRSP complex subunit 7 (Cofactor required for Sp1 transcriptional activation subunit 7) (Transcriptional coactivator CRSP70) (Activator- recruited cofactor 70 kDa component) (ARC70).

DUX2_HUMAN
θ value	5.27518 (rank : 284)	NC score	0.157532 (rank : 305)
Query Neighborhood Hits	354	Target Neighborhood Hits	173	Shared Neighborhood Hits	106
SwissProt Accessions	O75505	Gene names	DUX2
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 2.

HDAC5_MOUSE
θ value	5.27518 (rank : 285)	NC score	0.004691 (rank : 496)
Query Neighborhood Hits	354	Target Neighborhood Hits	310	Shared Neighborhood Hits	9
SwissProt Accessions	Q9Z2V6, Q9JL73	Gene names	Hdac5
Domain Architecture
Description	Histone deacetylase 5 (HD5) (Histone deacetylase mHDA1).

HXA1_HUMAN
θ value	5.27518 (rank : 286)	NC score	0.204524 (rank : 183)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	195
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXA1_MOUSE
θ value	5.27518 (rank : 287)	NC score	0.209398 (rank : 169)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	198
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

LBX1_HUMAN
θ value	5.27518 (rank : 288)	NC score	0.245153 (rank : 98)
Query Neighborhood Hits	354	Target Neighborhood Hits	357	Shared Neighborhood Hits	211
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

LBX1_MOUSE
θ value	5.27518 (rank : 289)	NC score	0.242101 (rank : 104)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	209
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

MAVS_HUMAN
θ value	5.27518 (rank : 290)	NC score	0.040773 (rank : 431)
Query Neighborhood Hits	354	Target Neighborhood Hits	271	Shared Neighborhood Hits	35
SwissProt Accessions	Q7Z434, Q3I0Y2, Q5T7I6, Q86VY7, Q9H1H3, Q9H4Y1, Q9H8D3, Q9ULE9	Gene names	MAVS, IPS1, KIAA1271, VISA
Domain Architecture	No domain graphic available
Description	Mitochondrial antiviral signaling protein (Interferon-beta promoter stimulator protein 1) (IPS-1) (Virus-induced signaling adapter) (CARD adapter inducing interferon-beta) (Cardif) (Putative NF-kappa-B- activating protein 031N).

NKX31_HUMAN
θ value	5.27518 (rank : 291)	NC score	0.208986 (rank : 171)
Query Neighborhood Hits	354	Target Neighborhood Hits	331	Shared Neighborhood Hits	186
SwissProt Accessions	Q99801, O15465, Q9H2P4, Q9H2P5, Q9H2P6, Q9H2P7, Q9HBG0	Gene names	NKX3-1, NKX3.1, NKX3A
Domain Architecture
Description	Homeobox protein Nkx-3.1.

NKX31_MOUSE
θ value	5.27518 (rank : 292)	NC score	0.203036 (rank : 188)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	187
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

OGFR_HUMAN
θ value	5.27518 (rank : 293)	NC score	0.051163 (rank : 415)
Query Neighborhood Hits	354	Target Neighborhood Hits	1582	Shared Neighborhood Hits	111
SwissProt Accessions	Q9NZT2, O96029, Q4VXW5, Q96CM2, Q9BQW1, Q9H4H0, Q9H7J5, Q9NZT3, Q9NZT4	Gene names	OGFR
Domain Architecture
Description	Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) (7-60 protein).

OTX1_MOUSE
θ value	5.27518 (rank : 294)	NC score	0.213760 (rank : 159)
Query Neighborhood Hits	354	Target Neighborhood Hits	372	Shared Neighborhood Hits	207
SwissProt Accessions	P80205	Gene names	Otx1, Otx-1
Domain Architecture
Description	Homeobox protein OTX1.

PF21B_MOUSE
θ value	5.27518 (rank : 295)	NC score	0.023923 (rank : 461)
Query Neighborhood Hits	354	Target Neighborhood Hits	278	Shared Neighborhood Hits	33
SwissProt Accessions	Q8C966	Gene names	Phf21b
Domain Architecture	No domain graphic available
Description	PHD finger protein 21B.

PGBM_HUMAN
θ value	5.27518 (rank : 296)	NC score	-0.000109 (rank : 506)
Query Neighborhood Hits	354	Target Neighborhood Hits	1113	Shared Neighborhood Hits	26
SwissProt Accessions	P98160, Q16287, Q9H3V5	Gene names	HSPG2
Domain Architecture
Description	Basement membrane-specific heparan sulfate proteoglycan core protein precursor (HSPG) (Perlecan) (PLC).

PRAX_MOUSE
θ value	5.27518 (rank : 297)	NC score	0.060696 (rank : 391)
Query Neighborhood Hits	354	Target Neighborhood Hits	199	Shared Neighborhood Hits	25
SwissProt Accessions	O55103, O55104	Gene names	Prx
Domain Architecture
Description	Periaxin.

SOX30_HUMAN
θ value	5.27518 (rank : 298)	NC score	0.018049 (rank : 470)
Query Neighborhood Hits	354	Target Neighborhood Hits	305	Shared Neighborhood Hits	35
SwissProt Accessions	O94993, O94995, Q8IYX6	Gene names	SOX30
Domain Architecture
Description	Transcription factor SOX-30.

SRRM2_MOUSE
θ value	5.27518 (rank : 299)	NC score	0.047502 (rank : 419)
Query Neighborhood Hits	354	Target Neighborhood Hits	1470	Shared Neighborhood Hits	79
SwissProt Accessions	Q8BTI8, Q3TBY5, Q569P9, Q80U37, Q8K383	Gene names	Srrm2, Kiaa0324
Domain Architecture	No domain graphic available
Description	Serine/arginine repetitive matrix protein 2.

TAF6_MOUSE
θ value	5.27518 (rank : 300)	NC score	0.037688 (rank : 438)
Query Neighborhood Hits	354	Target Neighborhood Hits	110	Shared Neighborhood Hits	25
SwissProt Accessions	Q62311	Gene names	Taf6, Taf2e
Domain Architecture
Description	Transcription initiation factor TFIID subunit 6 (Transcription initiation factor TFIID 70 kDa subunit) (TAF(II)70) (TAFII-70) (TAFII- 80) (TAFII80) (p80).

TNC6B_HUMAN
θ value	5.27518 (rank : 301)	NC score	0.015347 (rank : 476)
Query Neighborhood Hits	354	Target Neighborhood Hits	256	Shared Neighborhood Hits	23
SwissProt Accessions	Q9UPQ9, Q5TH52, Q8TBX2	Gene names	TNRC6B, KIAA1093
Domain Architecture
Description	Trinucleotide repeat-containing 6B protein.

ALX3_MOUSE
θ value	6.88961 (rank : 302)	NC score	0.228929 (rank : 127)
Query Neighborhood Hits	354	Target Neighborhood Hits	386	Shared Neighborhood Hits	214
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ASPC1_MOUSE
θ value	6.88961 (rank : 303)	NC score	0.019474 (rank : 468)
Query Neighborhood Hits	354	Target Neighborhood Hits	47	Shared Neighborhood Hits	8
SwissProt Accessions	Q8VBT9, Q3UKD1, Q6V7K5, Q9CT64	Gene names	Aspscr1, Tug
Domain Architecture	No domain graphic available
Description	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosome region candidate 1 homolog).

CART1_HUMAN
θ value	6.88961 (rank : 304)	NC score	0.193971 (rank : 209)
Query Neighborhood Hits	354	Target Neighborhood Hits	348	Shared Neighborhood Hits	202
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

CO4A6_HUMAN
θ value	6.88961 (rank : 305)	NC score	0.010672 (rank : 486)
Query Neighborhood Hits	354	Target Neighborhood Hits	318	Shared Neighborhood Hits	34
SwissProt Accessions	Q14031, Q12823, Q14053, Q5JYH6, Q9NQM5, Q9NTX3, Q9UJ76, Q9UMG6, Q9Y4L4	Gene names	COL4A6
Domain Architecture
Description	Collagen alpha-6(IV) chain precursor.

CSPG5_HUMAN
θ value	6.88961 (rank : 306)	NC score	0.024247 (rank : 460)
Query Neighborhood Hits	354	Target Neighborhood Hits	199	Shared Neighborhood Hits	23
SwissProt Accessions	O95196, Q71M39, Q71M40	Gene names	CSPG5, CALEB, NGC
Domain Architecture	No domain graphic available
Description	Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan C) (Acidic leucine-rich EGF-like domain-containing brain protein).

EPN1_HUMAN
θ value	6.88961 (rank : 307)	NC score	0.030229 (rank : 448)
Query Neighborhood Hits	354	Target Neighborhood Hits	206	Shared Neighborhood Hits	36
SwissProt Accessions	Q9Y6I3, Q86ST3, Q9HA18	Gene names	EPN1
Domain Architecture
Description	Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding mitotic phosphoprotein).

GBX2_HUMAN
θ value	6.88961 (rank : 308)	NC score	0.173245 (rank : 261)
Query Neighborhood Hits	354	Target Neighborhood Hits	322	Shared Neighborhood Hits	176
SwissProt Accessions	P52951, O43833, Q53RX5, Q9Y5Y1	Gene names	GBX2
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2).

GBX2_MOUSE
θ value	6.88961 (rank : 309)	NC score	0.173006 (rank : 262)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	176
SwissProt Accessions	P48031	Gene names	Gbx2, Mmoxa, Stra7
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2) (Homeobox protein STRA7).

GRIN1_HUMAN
θ value	6.88961 (rank : 310)	NC score	0.046805 (rank : 420)
Query Neighborhood Hits	354	Target Neighborhood Hits	681	Shared Neighborhood Hits	59
SwissProt Accessions	Q7Z2K8, Q8ND74, Q96PZ4	Gene names	GPRIN1, KIAA1893
Domain Architecture	No domain graphic available
Description	G protein-regulated inducer of neurite outgrowth 1 (GRIN1).

HLXB9_HUMAN
θ value	6.88961 (rank : 311)	NC score	0.207104 (rank : 175)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	198
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

HLXB9_MOUSE
θ value	6.88961 (rank : 312)	NC score	0.205493 (rank : 181)
Query Neighborhood Hits	354	Target Neighborhood Hits	354	Shared Neighborhood Hits	205
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

LASS2_HUMAN
θ value	6.88961 (rank : 313)	NC score	0.054457 (rank : 408)
Query Neighborhood Hits	354	Target Neighborhood Hits	47	Shared Neighborhood Hits	33
SwissProt Accessions	Q96G23, Q9HD96, Q9NW79	Gene names	LASS2, TMSG1
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 2 (Tumor metastasis-suppressor gene 1 protein) (SP260).

LASS2_MOUSE
θ value	6.88961 (rank : 314)	NC score	0.045051 (rank : 425)
Query Neighborhood Hits	354	Target Neighborhood Hits	51	Shared Neighborhood Hits	33
SwissProt Accessions	Q924Z4, Q3TXC5, Q9DCN6	Gene names	Lass2, Trh3
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 2 (Translocating chain-associating membrane protein homolog 3) (TRAM homolog 3).

MEOX1_HUMAN
θ value	6.88961 (rank : 315)	NC score	0.180166 (rank : 243)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	193
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

PAK6_HUMAN
θ value	6.88961 (rank : 316)	NC score	-0.006248 (rank : 507)
Query Neighborhood Hits	354	Target Neighborhood Hits	915	Shared Neighborhood Hits	14
SwissProt Accessions	Q9NQU5	Gene names	PAK6, PAK5
Domain Architecture
Description	Serine/threonine-protein kinase PAK 6 (EC 2.7.11.1) (p21-activated kinase 6) (PAK-6) (PAK-5).

PAX7_HUMAN
θ value	6.88961 (rank : 317)	NC score	0.203497 (rank : 185)
Query Neighborhood Hits	354	Target Neighborhood Hits	456	Shared Neighborhood Hits	220
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
θ value	6.88961 (rank : 318)	NC score	0.203306 (rank : 186)
Query Neighborhood Hits	354	Target Neighborhood Hits	422	Shared Neighborhood Hits	221
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PCQAP_HUMAN
θ value	6.88961 (rank : 319)	NC score	0.033752 (rank : 442)
Query Neighborhood Hits	354	Target Neighborhood Hits	549	Shared Neighborhood Hits	44
SwissProt Accessions	Q96RN5, O15413, Q6IC31, Q8NF16, Q96CT0, Q96IH7, Q9P1T3	Gene names	PCQAP, ARC105, CTG7A, TIG1
Domain Architecture	No domain graphic available
Description	Positive cofactor 2 glutamine/Q-rich-associated protein (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene 1 protein) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a).

PRCC_HUMAN
θ value	6.88961 (rank : 320)	NC score	0.044251 (rank : 426)
Query Neighborhood Hits	354	Target Neighborhood Hits	109	Shared Neighborhood Hits	21
SwissProt Accessions	Q92733, O00665, O00724	Gene names	PRCC, TPRC
Domain Architecture	No domain graphic available
Description	Proline-rich protein PRCC (Papillary renal cell carcinoma translocation-associated gene protein).

PRRXL_MOUSE
θ value	6.88961 (rank : 321)	NC score	0.214774 (rank : 154)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	209
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

SIP1_HUMAN
θ value	6.88961 (rank : 322)	NC score	0.007114 (rank : 493)
Query Neighborhood Hits	354	Target Neighborhood Hits	832	Shared Neighborhood Hits	37
SwissProt Accessions	O60315, Q9UED1	Gene names	ZFHX1B, KIAA0569, SIP1, ZFX1B
Domain Architecture
Description	Zinc finger homeobox protein 1b (Smad-interacting protein 1) (SMADIP1).

ALX3_HUMAN
θ value	8.99809 (rank : 323)	NC score	0.222123 (rank : 141)
Query Neighborhood Hits	354	Target Neighborhood Hits	380	Shared Neighborhood Hits	214
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX4_MOUSE
θ value	8.99809 (rank : 324)	NC score	0.211154 (rank : 163)
Query Neighborhood Hits	354	Target Neighborhood Hits	369	Shared Neighborhood Hits	213
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

BSN_HUMAN
θ value	8.99809 (rank : 325)	NC score	0.038843 (rank : 436)
Query Neighborhood Hits	354	Target Neighborhood Hits	1537	Shared Neighborhood Hits	92
SwissProt Accessions	Q9UPA5, O43161, Q7LGH3	Gene names	BSN, KIAA0434, ZNF231
Domain Architecture	No domain graphic available
Description	Protein bassoon (Zinc finger protein 231).

CSPG3_MOUSE
θ value	8.99809 (rank : 326)	NC score	0.011158 (rank : 485)
Query Neighborhood Hits	354	Target Neighborhood Hits	657	Shared Neighborhood Hits	47
SwissProt Accessions	P55066, Q6P1E3, Q8C4F8	Gene names	Cspg3, Ncan
Domain Architecture
Description	Neurocan core protein precursor (Chondroitin sulfate proteoglycan 3).

DLX4_MOUSE
θ value	8.99809 (rank : 327)	NC score	0.264588 (rank : 59)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	205
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

EP400_MOUSE
θ value	8.99809 (rank : 328)	NC score	0.022908 (rank : 463)
Query Neighborhood Hits	354	Target Neighborhood Hits	592	Shared Neighborhood Hits	57
SwissProt Accessions	Q8CHI8, Q80TC8, Q8BXI5, Q8BYW3, Q8C0P6, Q8CHI7, Q8VDF4, Q9DA54	Gene names	Ep400, Kiaa1498
Domain Architecture	No domain graphic available
Description	E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa SWI2/SNF2-related protein) (Domino homolog) (mDomino).

GLI2_HUMAN
θ value	8.99809 (rank : 329)	NC score	0.000078 (rank : 505)
Query Neighborhood Hits	354	Target Neighborhood Hits	971	Shared Neighborhood Hits	34
SwissProt Accessions	P10070, O60252, O60253, O60254, O60255, Q15590, Q15591	Gene names	GLI2, THP
Domain Architecture	No domain graphic available
Description	Zinc finger protein GLI2 (Tax helper protein).

HESX1_HUMAN
θ value	8.99809 (rank : 330)	NC score	0.195392 (rank : 207)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	190
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

HESX1_MOUSE
θ value	8.99809 (rank : 331)	NC score	0.196792 (rank : 200)
Query Neighborhood Hits	354	Target Neighborhood Hits	331	Shared Neighborhood Hits	192
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

HPS4_MOUSE
θ value	8.99809 (rank : 332)	NC score	0.015078 (rank : 477)
Query Neighborhood Hits	354	Target Neighborhood Hits	80	Shared Neighborhood Hits	14
SwissProt Accessions	Q99KG7	Gene names	Hps4, Le
Domain Architecture	No domain graphic available
Description	Hermansky-Pudlak syndrome 4 protein homolog (Light-ear protein) (Le protein).

LCP2_MOUSE
θ value	8.99809 (rank : 333)	NC score	0.013799 (rank : 481)
Query Neighborhood Hits	354	Target Neighborhood Hits	177	Shared Neighborhood Hits	15
SwissProt Accessions	Q60787	Gene names	Lcp2
Domain Architecture
Description	Lymphocyte cytosolic protein 2 (SH2 domain-containing leukocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76).

LHX61_HUMAN
θ value	8.99809 (rank : 334)	NC score	0.165489 (rank : 284)
Query Neighborhood Hits	354	Target Neighborhood Hits	412	Shared Neighborhood Hits	193
SwissProt Accessions	Q9UPM6, Q5T7S8, Q9NTK3, Q9UPM5	Gene names	LHX6, LHX6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1 (Lhx6).

MSX1_HUMAN
θ value	8.99809 (rank : 335)	NC score	0.210285 (rank : 166)
Query Neighborhood Hits	354	Target Neighborhood Hits	374	Shared Neighborhood Hits	196
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

MSX1_MOUSE
θ value	8.99809 (rank : 336)	NC score	0.209668 (rank : 168)
Query Neighborhood Hits	354	Target Neighborhood Hits	322	Shared Neighborhood Hits	191
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

MSX2_HUMAN
θ value	8.99809 (rank : 337)	NC score	0.210641 (rank : 164)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	195
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

MSX2_MOUSE
θ value	8.99809 (rank : 338)	NC score	0.209694 (rank : 167)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	193
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

NAB2_HUMAN
θ value	8.99809 (rank : 339)	NC score	0.009705 (rank : 489)
Query Neighborhood Hits	354	Target Neighborhood Hits	51	Shared Neighborhood Hits	7
SwissProt Accessions	Q15742, O76006, Q14797	Gene names	NAB2, MADER
Domain Architecture
Description	NGFI-A-binding protein 2 (EGR-1-binding protein 2) (Melanoma- associated delayed early response protein) (Protein MADER).

NFH_MOUSE
θ value	8.99809 (rank : 340)	NC score	0.032069 (rank : 446)
Query Neighborhood Hits	354	Target Neighborhood Hits	2247	Shared Neighborhood Hits	105
SwissProt Accessions	P19246, Q5SVF6, Q61959	Gene names	Nefh, Nfh
Domain Architecture
Description	Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).

NKX32_HUMAN
θ value	8.99809 (rank : 341)	NC score	0.203048 (rank : 187)
Query Neighborhood Hits	354	Target Neighborhood Hits	323	Shared Neighborhood Hits	191
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

NKX32_MOUSE
θ value	8.99809 (rank : 342)	NC score	0.202106 (rank : 189)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	190
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

OTX2_HUMAN
θ value	8.99809 (rank : 343)	NC score	0.196377 (rank : 202)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	192
SwissProt Accessions	P32243, Q6GTV3, Q9HAW3, Q9P2R1	Gene names	OTX2
Domain Architecture
Description	Homeobox protein OTX2.

OTX2_MOUSE
θ value	8.99809 (rank : 344)	NC score	0.201299 (rank : 191)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	196
SwissProt Accessions	P80206	Gene names	Otx2, Otx-2
Domain Architecture
Description	Homeobox protein OTX2.

PEPP2_HUMAN
θ value	8.99809 (rank : 345)	NC score	0.206608 (rank : 179)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	186
SwissProt Accessions	Q9BQY4, Q9BR00	Gene names	PEPP2, THG1
Domain Architecture
Description	Paired-like homeobox protein PEPP-2 (Testis homeobox gene 1).

PHLB1_MOUSE
θ value	8.99809 (rank : 346)	NC score	0.020693 (rank : 465)
Query Neighborhood Hits	354	Target Neighborhood Hits	678	Shared Neighborhood Hits	33
SwissProt Accessions	Q6PDH0, Q80TV2	Gene names	Phldb1, Kiaa0638, Ll5a
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 1 (Protein LL5-alpha).

PO2F1_MOUSE
θ value	8.99809 (rank : 347)	NC score	0.099478 (rank : 341)
Query Neighborhood Hits	354	Target Neighborhood Hits	408	Shared Neighborhood Hits	196
SwissProt Accessions	P25425, Q61994, Q63891, Q6Y681, Q7TSD0, Q8BT04, Q8K570, Q99JH0, Q9WTZ4, Q9WTZ5, Q9WTZ6	Gene names	Pou2f1, Oct-1, Otf-1, Otf1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

PO5F1_HUMAN
θ value	8.99809 (rank : 348)	NC score	0.105615 (rank : 336)
Query Neighborhood Hits	354	Target Neighborhood Hits	321	Shared Neighborhood Hits	176
SwissProt Accessions	Q01860, P31359, Q15167, Q15168, Q16422	Gene names	POU5F1, OCT3, OCT4, OTF3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4).

PRRX1_HUMAN
θ value	8.99809 (rank : 349)	NC score	0.208474 (rank : 173)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	199
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

PRRX1_MOUSE
θ value	8.99809 (rank : 350)	NC score	0.207980 (rank : 174)
Query Neighborhood Hits	354	Target Neighborhood Hits	346	Shared Neighborhood Hits	197
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

SNRPA_HUMAN
θ value	8.99809 (rank : 351)	NC score	0.010292 (rank : 487)
Query Neighborhood Hits	354	Target Neighborhood Hits	128	Shared Neighborhood Hits	10
SwissProt Accessions	P09012	Gene names	SNRPA
Domain Architecture
Description	U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A protein) (U1-A).

VAX2_HUMAN
θ value	8.99809 (rank : 352)	NC score	0.198858 (rank : 193)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	192
SwissProt Accessions	Q9UIW0	Gene names	VAX2
Domain Architecture
Description	Ventral anterior homeobox 2.

VAX2_MOUSE
θ value	8.99809 (rank : 353)	NC score	0.196674 (rank : 201)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	192
SwissProt Accessions	Q9WTP9	Gene names	Vax2, Vex
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 2 (Ventral retina homeodomain protein).

VSIG2_MOUSE
θ value	8.99809 (rank : 354)	NC score	0.002216 (rank : 502)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	7
SwissProt Accessions	Q9Z109, Q9CVA4, Q9D0T4	Gene names	Vsig2, Ctm, Ctxl
Domain Architecture	No domain graphic available
Description	V-set and immunoglobulin domain-containing protein 2 precursor (CT- like protein) (Cortical thymocyte-like protein).

ALX4_HUMAN
θ value	θ > 10 (rank : 355)	NC score	0.206722 (rank : 177)
Query Neighborhood Hits	354	Target Neighborhood Hits	394	Shared Neighborhood Hits	214
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

ARX_HUMAN
θ value	θ > 10 (rank : 356)	NC score	0.198002 (rank : 196)
Query Neighborhood Hits	354	Target Neighborhood Hits	401	Shared Neighborhood Hits	203
SwissProt Accessions	Q96QS3	Gene names	ARX
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

ARX_MOUSE
θ value	θ > 10 (rank : 357)	NC score	0.196309 (rank : 204)
Query Neighborhood Hits	354	Target Neighborhood Hits	398	Shared Neighborhood Hits	201
SwissProt Accessions	O35085, Q9QYT4	Gene names	Arx
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

CART1_MOUSE
θ value	θ > 10 (rank : 358)	NC score	0.191804 (rank : 222)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	199
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

CHX10_HUMAN
θ value	θ > 10 (rank : 359)	NC score	0.170716 (rank : 270)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	190
SwissProt Accessions	P58304	Gene names	CHX10, VSX2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

CHX10_MOUSE
θ value	θ > 10 (rank : 360)	NC score	0.170133 (rank : 271)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	190
SwissProt Accessions	Q61412	Gene names	Chx10, Vsx2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

CIC_HUMAN
θ value	θ > 10 (rank : 361)	NC score	0.055201 (rank : 407)
Query Neighborhood Hits	354	Target Neighborhood Hits	992	Shared Neighborhood Hits	88
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

CK024_HUMAN
θ value	θ > 10 (rank : 362)	NC score	0.066459 (rank : 378)
Query Neighborhood Hits	354	Target Neighborhood Hits	408	Shared Neighborhood Hits	53
SwissProt Accessions	Q96F05, Q9H2K4	Gene names	C11orf24
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C11orf24 precursor (Protein DM4E3).

CRX_HUMAN
θ value	θ > 10 (rank : 363)	NC score	0.209022 (rank : 170)
Query Neighborhood Hits	354	Target Neighborhood Hits	360	Shared Neighborhood Hits	203
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

CRX_MOUSE
θ value	θ > 10 (rank : 364)	NC score	0.206622 (rank : 178)
Query Neighborhood Hits	354	Target Neighborhood Hits	359	Shared Neighborhood Hits	198
SwissProt Accessions	O54751	Gene names	Crx
Domain Architecture
Description	Cone-rod homeobox protein.

CS016_HUMAN
θ value	θ > 10 (rank : 365)	NC score	0.050034 (rank : 417)
Query Neighborhood Hits	354	Target Neighborhood Hits	310	Shared Neighborhood Hits	42
SwissProt Accessions	Q8ND99	Gene names	C19orf16
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C19orf16.

CUTL2_HUMAN
θ value	θ > 10 (rank : 366)	NC score	0.130990 (rank : 325)
Query Neighborhood Hits	354	Target Neighborhood Hits	906	Shared Neighborhood Hits	164
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_MOUSE
θ value	θ > 10 (rank : 367)	NC score	0.131799 (rank : 324)
Query Neighborhood Hits	354	Target Neighborhood Hits	771	Shared Neighborhood Hits	155
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

DLX4_HUMAN
θ value	θ > 10 (rank : 368)	NC score	0.250850 (rank : 89)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	207
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

ESX1L_HUMAN
θ value	θ > 10 (rank : 369)	NC score	0.195296 (rank : 208)
Query Neighborhood Hits	354	Target Neighborhood Hits	498	Shared Neighborhood Hits	212
SwissProt Accessions	Q8N693, Q7Z6K7	Gene names	ESX1L, ESX1R
Domain Architecture
Description	Extraembryonic, spermatogenesis, homeobox 1-like protein.

EVX1_HUMAN
θ value	θ > 10 (rank : 370)	NC score	0.192249 (rank : 221)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	193
SwissProt Accessions	P49640	Gene names	EVX1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

EVX1_MOUSE
θ value	θ > 10 (rank : 371)	NC score	0.192883 (rank : 215)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	191
SwissProt Accessions	P23683	Gene names	Evx1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

EVX2_HUMAN
θ value	θ > 10 (rank : 372)	NC score	0.192346 (rank : 220)
Query Neighborhood Hits	354	Target Neighborhood Hits	325	Shared Neighborhood Hits	186
SwissProt Accessions	Q03828	Gene names	EVX2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

EVX2_MOUSE
θ value	θ > 10 (rank : 373)	NC score	0.192961 (rank : 214)
Query Neighborhood Hits	354	Target Neighborhood Hits	327	Shared Neighborhood Hits	189
SwissProt Accessions	P49749	Gene names	Evx2, Evx-2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

GBX1_HUMAN
θ value	θ > 10 (rank : 374)	NC score	0.164105 (rank : 291)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	178
SwissProt Accessions	Q14549	Gene names	GBX1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

GBX1_MOUSE
θ value	θ > 10 (rank : 375)	NC score	0.163880 (rank : 292)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	179
SwissProt Accessions	P82976, Q8CGW5	Gene names	Gbx1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

GSHI_HUMAN
θ value	θ > 10 (rank : 376)	NC score	0.174406 (rank : 257)
Query Neighborhood Hits	354	Target Neighborhood Hits	314	Shared Neighborhood Hits	192
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

GSHI_MOUSE
θ value	θ > 10 (rank : 377)	NC score	0.178080 (rank : 250)
Query Neighborhood Hits	354	Target Neighborhood Hits	313	Shared Neighborhood Hits	192
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

HMBX1_HUMAN
θ value	θ > 10 (rank : 378)	NC score	0.106414 (rank : 335)
Query Neighborhood Hits	354	Target Neighborhood Hits	118	Shared Neighborhood Hits	79
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HMBX1_MOUSE
θ value	θ > 10 (rank : 379)	NC score	0.089879 (rank : 345)
Query Neighborhood Hits	354	Target Neighborhood Hits	117	Shared Neighborhood Hits	73
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HOMEZ_HUMAN
θ value	θ > 10 (rank : 380)	NC score	0.068149 (rank : 374)
Query Neighborhood Hits	354	Target Neighborhood Hits	110	Shared Neighborhood Hits	42
SwissProt Accessions	Q8IX15, Q6P049, Q86XB6, Q9P2A5	Gene names	HOMEZ, KIAA1443
Domain Architecture
Description	Homeobox and leucine zipper protein Homez (Homeodomain leucine zipper- containing factor).

HOP_HUMAN
θ value	θ > 10 (rank : 381)	NC score	0.070705 (rank : 370)
Query Neighborhood Hits	354	Target Neighborhood Hits	107	Shared Neighborhood Hits	67
SwissProt Accessions	Q9BPY8, Q8N0V6, Q96CI1	Gene names	HOP, HOD, LAGY, NECC1, OB1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1).

HXA10_HUMAN
θ value	θ > 10 (rank : 382)	NC score	0.168988 (rank : 274)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	196
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXA10_MOUSE
θ value	θ > 10 (rank : 383)	NC score	0.167658 (rank : 276)
Query Neighborhood Hits	354	Target Neighborhood Hits	365	Shared Neighborhood Hits	196
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

HXA11_HUMAN
θ value	θ > 10 (rank : 384)	NC score	0.178247 (rank : 249)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	183
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

HXA11_MOUSE
θ value	θ > 10 (rank : 385)	NC score	0.177205 (rank : 252)
Query Neighborhood Hits	354	Target Neighborhood Hits	327	Shared Neighborhood Hits	183
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

HXA2_HUMAN
θ value	θ > 10 (rank : 386)	NC score	0.182497 (rank : 238)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	189
SwissProt Accessions	O43364	Gene names	HOXA2
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A2.

HXA2_MOUSE
θ value	θ > 10 (rank : 387)	NC score	0.179057 (rank : 245)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	187
SwissProt Accessions	P31245, Q149U3, Q920T8	Gene names	Hoxa2, Hox-1.11, Hoxa-2
Domain Architecture
Description	Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11).

HXA4_HUMAN
θ value	θ > 10 (rank : 388)	NC score	0.159431 (rank : 303)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	204
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

HXA4_MOUSE
θ value	θ > 10 (rank : 389)	NC score	0.166411 (rank : 279)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	202
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

HXA5_HUMAN
θ value	θ > 10 (rank : 390)	NC score	0.153487 (rank : 312)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	197
SwissProt Accessions	P20719, O43367, Q96CY6	Gene names	HOXA5, HOX1C
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1C).

HXA5_MOUSE
θ value	θ > 10 (rank : 391)	NC score	0.153122 (rank : 313)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	193
SwissProt Accessions	P09021, Q91VQ5	Gene names	Hoxa5, Hox-1.3, Hoxa-5
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1.3) (M2).

HXA6_HUMAN
θ value	θ > 10 (rank : 392)	NC score	0.165929 (rank : 281)
Query Neighborhood Hits	354	Target Neighborhood Hits	309	Shared Neighborhood Hits	192
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

HXA6_MOUSE
θ value	θ > 10 (rank : 393)	NC score	0.162196 (rank : 295)
Query Neighborhood Hits	354	Target Neighborhood Hits	304	Shared Neighborhood Hits	190
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

HXA7_HUMAN
θ value	θ > 10 (rank : 394)	NC score	0.160290 (rank : 298)
Query Neighborhood Hits	354	Target Neighborhood Hits	309	Shared Neighborhood Hits	190
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXA7_MOUSE
θ value	θ > 10 (rank : 395)	NC score	0.166460 (rank : 278)
Query Neighborhood Hits	354	Target Neighborhood Hits	318	Shared Neighborhood Hits	192
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXB2_HUMAN
θ value	θ > 10 (rank : 396)	NC score	0.175326 (rank : 254)
Query Neighborhood Hits	354	Target Neighborhood Hits	367	Shared Neighborhood Hits	196
SwissProt Accessions	P14652, P10913, P17485	Gene names	HOXB2, HOX2H
Domain Architecture
Description	Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8).

HXB3_HUMAN
θ value	θ > 10 (rank : 397)	NC score	0.171062 (rank : 268)
Query Neighborhood Hits	354	Target Neighborhood Hits	559	Shared Neighborhood Hits	209
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HXB3_MOUSE
θ value	θ > 10 (rank : 398)	NC score	0.169611 (rank : 272)
Query Neighborhood Hits	354	Target Neighborhood Hits	493	Shared Neighborhood Hits	200
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

HXB4_HUMAN
θ value	θ > 10 (rank : 399)	NC score	0.159159 (rank : 304)
Query Neighborhood Hits	354	Target Neighborhood Hits	376	Shared Neighborhood Hits	205
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXB4_MOUSE
θ value	θ > 10 (rank : 400)	NC score	0.156786 (rank : 307)
Query Neighborhood Hits	354	Target Neighborhood Hits	375	Shared Neighborhood Hits	198
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

HXB5_HUMAN
θ value	θ > 10 (rank : 401)	NC score	0.157058 (rank : 306)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	195
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

HXB5_MOUSE
θ value	θ > 10 (rank : 402)	NC score	0.156624 (rank : 308)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	194
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXB6_HUMAN
θ value	θ > 10 (rank : 403)	NC score	0.165232 (rank : 285)
Query Neighborhood Hits	354	Target Neighborhood Hits	307	Shared Neighborhood Hits	190
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXB6_MOUSE
θ value	θ > 10 (rank : 404)	NC score	0.165560 (rank : 283)
Query Neighborhood Hits	354	Target Neighborhood Hits	309	Shared Neighborhood Hits	190
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

HXB7_HUMAN
θ value	θ > 10 (rank : 405)	NC score	0.164246 (rank : 290)
Query Neighborhood Hits	354	Target Neighborhood Hits	311	Shared Neighborhood Hits	189
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

HXB7_MOUSE
θ value	θ > 10 (rank : 406)	NC score	0.166039 (rank : 280)
Query Neighborhood Hits	354	Target Neighborhood Hits	314	Shared Neighborhood Hits	189
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXB8_HUMAN
θ value	θ > 10 (rank : 407)	NC score	0.190264 (rank : 224)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	194
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

HXB8_MOUSE
θ value	θ > 10 (rank : 408)	NC score	0.192525 (rank : 217)
Query Neighborhood Hits	354	Target Neighborhood Hits	325	Shared Neighborhood Hits	195
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

HXB9_HUMAN
θ value	θ > 10 (rank : 409)	NC score	0.159568 (rank : 302)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	193
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HXB9_MOUSE
θ value	θ > 10 (rank : 410)	NC score	0.160845 (rank : 296)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	194
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HXC10_HUMAN
θ value	θ > 10 (rank : 411)	NC score	0.171639 (rank : 265)
Query Neighborhood Hits	354	Target Neighborhood Hits	417	Shared Neighborhood Hits	208
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HXC10_MOUSE
θ value	θ > 10 (rank : 412)	NC score	0.172656 (rank : 263)
Query Neighborhood Hits	354	Target Neighborhood Hits	417	Shared Neighborhood Hits	207
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXC11_HUMAN
θ value	θ > 10 (rank : 413)	NC score	0.187155 (rank : 230)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	196
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

HXC12_HUMAN
θ value	θ > 10 (rank : 414)	NC score	0.167893 (rank : 275)
Query Neighborhood Hits	354	Target Neighborhood Hits	313	Shared Neighborhood Hits	182
SwissProt Accessions	P31275, Q9BXJ6	Gene names	HOXC12, HOX3F
Domain Architecture
Description	Homeobox protein Hox-C12 (Hox-3F).

HXC12_MOUSE
θ value	θ > 10 (rank : 415)	NC score	0.167574 (rank : 277)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	183
SwissProt Accessions	Q8K5B8	Gene names	Hoxc12, Hox-3.8, Hoxc-12
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C12 (Hox-3.8).

HXC4_MOUSE
θ value	θ > 10 (rank : 416)	NC score	0.164869 (rank : 288)
Query Neighborhood Hits	354	Target Neighborhood Hits	365	Shared Neighborhood Hits	201
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

HXC5_HUMAN
θ value	θ > 10 (rank : 417)	NC score	0.152350 (rank : 315)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	186
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HXC5_MOUSE
θ value	θ > 10 (rank : 418)	NC score	0.152023 (rank : 316)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	185
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

HXC6_HUMAN
θ value	θ > 10 (rank : 419)	NC score	0.164972 (rank : 286)
Query Neighborhood Hits	354	Target Neighborhood Hits	306	Shared Neighborhood Hits	188
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
θ value	θ > 10 (rank : 420)	NC score	0.164972 (rank : 287)
Query Neighborhood Hits	354	Target Neighborhood Hits	306	Shared Neighborhood Hits	188
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

HXC8_HUMAN
θ value	θ > 10 (rank : 421)	NC score	0.193703 (rank : 212)
Query Neighborhood Hits	354	Target Neighborhood Hits	327	Shared Neighborhood Hits	200
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXC8_MOUSE
θ value	θ > 10 (rank : 422)	NC score	0.193736 (rank : 211)
Query Neighborhood Hits	354	Target Neighborhood Hits	327	Shared Neighborhood Hits	200
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC9_HUMAN
θ value	θ > 10 (rank : 423)	NC score	0.160280 (rank : 299)
Query Neighborhood Hits	354	Target Neighborhood Hits	339	Shared Neighborhood Hits	193
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
θ value	θ > 10 (rank : 424)	NC score	0.160240 (rank : 300)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	193
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXD10_HUMAN
θ value	θ > 10 (rank : 425)	NC score	0.173908 (rank : 259)
Query Neighborhood Hits	354	Target Neighborhood Hits	392	Shared Neighborhood Hits	209
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
θ value	θ > 10 (rank : 426)	NC score	0.173320 (rank : 260)
Query Neighborhood Hits	354	Target Neighborhood Hits	392	Shared Neighborhood Hits	205
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HXD11_HUMAN
θ value	θ > 10 (rank : 427)	NC score	0.185604 (rank : 232)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	201
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

HXD11_MOUSE
θ value	θ > 10 (rank : 428)	NC score	0.185978 (rank : 231)
Query Neighborhood Hits	354	Target Neighborhood Hits	376	Shared Neighborhood Hits	204
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HXD12_HUMAN
θ value	θ > 10 (rank : 429)	NC score	0.178479 (rank : 248)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	187
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXD12_MOUSE
θ value	θ > 10 (rank : 430)	NC score	0.181384 (rank : 241)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	192
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

HXD3_HUMAN
θ value	θ > 10 (rank : 431)	NC score	0.171145 (rank : 266)
Query Neighborhood Hits	354	Target Neighborhood Hits	433	Shared Neighborhood Hits	208
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

HXD3_MOUSE
θ value	θ > 10 (rank : 432)	NC score	0.171971 (rank : 264)
Query Neighborhood Hits	354	Target Neighborhood Hits	435	Shared Neighborhood Hits	205
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

HXD4_HUMAN
θ value	θ > 10 (rank : 433)	NC score	0.155278 (rank : 309)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	195
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

HXD4_MOUSE
θ value	θ > 10 (rank : 434)	NC score	0.152828 (rank : 314)
Query Neighborhood Hits	354	Target Neighborhood Hits	339	Shared Neighborhood Hits	191
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

HXD8_HUMAN
θ value	θ > 10 (rank : 435)	NC score	0.178862 (rank : 247)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	194
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HXD8_MOUSE
θ value	θ > 10 (rank : 436)	NC score	0.177306 (rank : 251)
Query Neighborhood Hits	354	Target Neighborhood Hits	333	Shared Neighborhood Hits	194
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXD9_HUMAN
θ value	θ > 10 (rank : 437)	NC score	0.160647 (rank : 297)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	200
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXD9_MOUSE
θ value	θ > 10 (rank : 438)	NC score	0.159569 (rank : 301)
Query Neighborhood Hits	354	Target Neighborhood Hits	359	Shared Neighborhood Hits	198
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

IPF1_HUMAN
θ value	θ > 10 (rank : 439)	NC score	0.183870 (rank : 234)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	193
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

IPF1_MOUSE
θ value	θ > 10 (rank : 440)	NC score	0.182982 (rank : 235)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	195
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

LASS4_MOUSE
θ value	θ > 10 (rank : 441)	NC score	0.077120 (rank : 355)
Query Neighborhood Hits	354	Target Neighborhood Hits	38	Shared Neighborhood Hits	23
SwissProt Accessions	Q9D6J1, Q8BZA6, Q8C151, Q9CX09	Gene names	Lass4, Trh1
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 4 (Translocating chain-associating membrane protein homolog 1) (TRAM homolog 1).

LHX61_MOUSE
θ value	θ > 10 (rank : 442)	NC score	0.149629 (rank : 320)
Query Neighborhood Hits	354	Target Neighborhood Hits	396	Shared Neighborhood Hits	185
SwissProt Accessions	Q9R1R0, Q9R1R1	Gene names	Lhx6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1.

LHX8_MOUSE
θ value	θ > 10 (rank : 443)	NC score	0.164254 (rank : 289)
Query Neighborhood Hits	354	Target Neighborhood Hits	406	Shared Neighborhood Hits	187
SwissProt Accessions	O35652, O70163, O88707	Gene names	Lhx8, Lhx7
Domain Architecture
Description	LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3).

LMO3_HUMAN
θ value	θ > 10 (rank : 444)	NC score	0.061280 (rank : 387)
Query Neighborhood Hits	354	Target Neighborhood Hits	111	Shared Neighborhood Hits	22
SwissProt Accessions	Q8TAP4, Q8N974, Q9UDD5	Gene names	LMO3, RBTN3, RHOM3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1) (Rhombotin-3).

LMO3_MOUSE
θ value	θ > 10 (rank : 445)	NC score	0.061280 (rank : 388)
Query Neighborhood Hits	354	Target Neighborhood Hits	111	Shared Neighborhood Hits	22
SwissProt Accessions	Q8BZL8	Gene names	Lmo3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1).

LMO4_HUMAN
θ value	θ > 10 (rank : 446)	NC score	0.062640 (rank : 385)
Query Neighborhood Hits	354	Target Neighborhood Hits	111	Shared Neighborhood Hits	22
SwissProt Accessions	P61968, O00158, O88894	Gene names	LMO4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LMO4_MOUSE
θ value	θ > 10 (rank : 447)	NC score	0.062640 (rank : 386)
Query Neighborhood Hits	354	Target Neighborhood Hits	111	Shared Neighborhood Hits	22
SwissProt Accessions	P61969, O00158, O88894	Gene names	Lmo4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LPP_HUMAN
θ value	θ > 10 (rank : 448)	NC score	0.050035 (rank : 416)
Query Neighborhood Hits	354	Target Neighborhood Hits	775	Shared Neighborhood Hits	85
SwissProt Accessions	Q93052, Q8NFX5	Gene names	LPP
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma).

MBD6_HUMAN
θ value	θ > 10 (rank : 449)	NC score	0.059921 (rank : 394)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	48
SwissProt Accessions	Q96DN6, Q8N3M0, Q8NA81, Q96Q00	Gene names	MBD6, KIAA1887
Domain Architecture	No domain graphic available
Description	Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding protein MBD6).

MEOX2_HUMAN
θ value	θ > 10 (rank : 450)	NC score	0.182550 (rank : 237)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	193
SwissProt Accessions	P50222, O75263, Q9UPL6	Gene names	MEOX2, GAX, MOX2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox).

MEOX2_MOUSE
θ value	θ > 10 (rank : 451)	NC score	0.182943 (rank : 236)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	195
SwissProt Accessions	P32443, Q544T6	Gene names	Meox2, Gax, Mox-2, Mox2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2).

MSX3_MOUSE
θ value	θ > 10 (rank : 452)	NC score	0.201473 (rank : 190)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	192
SwissProt Accessions	P70354, P70246, Q03360, Q80W10	Gene names	Msx3, Msx-3
Domain Architecture
Description	Homeobox protein MSX-3.

MUC7_HUMAN
θ value	θ > 10 (rank : 453)	NC score	0.066859 (rank : 376)
Query Neighborhood Hits	354	Target Neighborhood Hits	538	Shared Neighborhood Hits	56
SwissProt Accessions	Q8TAX7	Gene names	MUC7, MG2
Domain Architecture	No domain graphic available
Description	Mucin-7 precursor (MUC-7) (Salivary mucin-7) (Apo-MG2).

NFRKB_MOUSE
θ value	θ > 10 (rank : 454)	NC score	0.057441 (rank : 402)
Query Neighborhood Hits	354	Target Neighborhood Hits	393	Shared Neighborhood Hits	54
SwissProt Accessions	Q6PIJ4, Q8BWV5, Q8K0X6	Gene names	Nfrkb
Domain Architecture	No domain graphic available
Description	Nuclear factor related to kappa-B-binding protein (DNA-binding protein R kappa-B).

OTP_MOUSE
θ value	θ > 10 (rank : 455)	NC score	0.216533 (rank : 146)
Query Neighborhood Hits	354	Target Neighborhood Hits	387	Shared Neighborhood Hits	208
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

PAX4_MOUSE
θ value	θ > 10 (rank : 456)	NC score	0.178894 (rank : 246)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	208
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

PAX6_HUMAN
θ value	θ > 10 (rank : 457)	NC score	0.162244 (rank : 293)
Query Neighborhood Hits	354	Target Neighborhood Hits	383	Shared Neighborhood Hits	199
SwissProt Accessions	P26367, Q6N006, Q99413	Gene names	PAX6, AN2
Domain Architecture
Description	Paired box protein Pax-6 (Oculorhombin) (Aniridia type II protein).

PAX6_MOUSE
θ value	θ > 10 (rank : 458)	NC score	0.162244 (rank : 294)
Query Neighborhood Hits	354	Target Neighborhood Hits	383	Shared Neighborhood Hits	199
SwissProt Accessions	P63015, P32117, P70601, Q62222, Q64037, Q8CEI5, Q8VDB5, Q921Q8	Gene names	Pax6, Pax-6, Sey
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-6 (Oculorhombin).

PHX2A_HUMAN
θ value	θ > 10 (rank : 459)	NC score	0.214559 (rank : 155)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	196
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

PHX2A_MOUSE
θ value	θ > 10 (rank : 460)	NC score	0.215187 (rank : 153)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	195
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

PHX2B_HUMAN
θ value	θ > 10 (rank : 461)	NC score	0.215349 (rank : 150)
Query Neighborhood Hits	354	Target Neighborhood Hits	407	Shared Neighborhood Hits	205
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
θ value	θ > 10 (rank : 462)	NC score	0.215349 (rank : 151)
Query Neighborhood Hits	354	Target Neighborhood Hits	407	Shared Neighborhood Hits	205
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PIT1_HUMAN
θ value	θ > 10 (rank : 463)	NC score	0.099518 (rank : 340)
Query Neighborhood Hits	354	Target Neighborhood Hits	292	Shared Neighborhood Hits	174
SwissProt Accessions	P28069, O75757, Q15132, Q15133, Q9UEL3	Gene names	POU1F1, GHF1, PIT1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PIT1_MOUSE
θ value	θ > 10 (rank : 464)	NC score	0.101748 (rank : 339)
Query Neighborhood Hits	354	Target Neighborhood Hits	313	Shared Neighborhood Hits	184
SwissProt Accessions	Q00286	Gene names	Pou1f1, Pit-1, Pit1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PO121_HUMAN
θ value	θ > 10 (rank : 465)	NC score	0.051430 (rank : 414)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	46
SwissProt Accessions	Q9Y2N3, O75115, Q9Y4S7	Gene names	POM121, KIAA0618, NUP121
Domain Architecture	No domain graphic available
Description	Nuclear envelope pore membrane protein POM 121 (Pore membrane protein of 121 kDa) (P145).

PO2F3_HUMAN
θ value	θ > 10 (rank : 466)	NC score	0.101863 (rank : 338)
Query Neighborhood Hits	354	Target Neighborhood Hits	319	Shared Neighborhood Hits	177
SwissProt Accessions	Q9UKI9, Q9UKR7, Q9Y504	Gene names	POU2F3, OTF11, PLA1
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein).

PO2F3_MOUSE
θ value	θ > 10 (rank : 467)	NC score	0.103696 (rank : 337)
Query Neighborhood Hits	354	Target Neighborhood Hits	328	Shared Neighborhood Hits	182
SwissProt Accessions	P31362	Gene names	Pou2f3, Epoc1, Oct11, Otf-11, Otf11
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1).

PO3F1_HUMAN
θ value	θ > 10 (rank : 468)	NC score	0.058739 (rank : 401)
Query Neighborhood Hits	354	Target Neighborhood Hits	256	Shared Neighborhood Hits	148
SwissProt Accessions	Q03052	Gene names	POU3F1, OCT6, OTF6
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

PO3F1_MOUSE
θ value	θ > 10 (rank : 469)	NC score	0.059736 (rank : 395)
Query Neighborhood Hits	354	Target Neighborhood Hits	261	Shared Neighborhood Hits	149
SwissProt Accessions	P21952	Gene names	Pou3f1, Oct6, Otf-6, Otf6, Scip
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

PO3F2_HUMAN
θ value	θ > 10 (rank : 470)	NC score	0.076616 (rank : 356)
Query Neighborhood Hits	354	Target Neighborhood Hits	308	Shared Neighborhood Hits	169
SwissProt Accessions	P20265, Q14960, Q86V54, Q9UJL0	Gene names	POU3F2, BRN2, OCT7, OTF7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F2_MOUSE
θ value	θ > 10 (rank : 471)	NC score	0.076611 (rank : 357)
Query Neighborhood Hits	354	Target Neighborhood Hits	313	Shared Neighborhood Hits	169
SwissProt Accessions	P31360	Gene names	Pou3f2, Brn-2, Brn2, Otf7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F3_HUMAN
θ value	θ > 10 (rank : 472)	NC score	0.082809 (rank : 350)
Query Neighborhood Hits	354	Target Neighborhood Hits	311	Shared Neighborhood Hits	175
SwissProt Accessions	P20264, P78379	Gene names	POU3F3, BRN1, OTF8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F3_MOUSE
θ value	θ > 10 (rank : 473)	NC score	0.082685 (rank : 351)
Query Neighborhood Hits	354	Target Neighborhood Hits	308	Shared Neighborhood Hits	174
SwissProt Accessions	P31361	Gene names	Pou3f3, Brn-1, Brn1, Otf8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F4_HUMAN
θ value	θ > 10 (rank : 474)	NC score	0.064247 (rank : 384)
Query Neighborhood Hits	354	Target Neighborhood Hits	297	Shared Neighborhood Hits	156
SwissProt Accessions	P49335, Q5H9G9, Q99410	Gene names	POU3F4, BRN4, OTF9
Domain Architecture
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

PO3F4_MOUSE
θ value	θ > 10 (rank : 475)	NC score	0.064947 (rank : 382)
Query Neighborhood Hits	354	Target Neighborhood Hits	281	Shared Neighborhood Hits	153
SwissProt Accessions	P62515, P25216	Gene names	Pou3f4, Brn-4, Brn4, Otf9
Domain Architecture	No domain graphic available
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

PO4F1_HUMAN
θ value	θ > 10 (rank : 476)	NC score	0.078686 (rank : 354)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	176
SwissProt Accessions	Q01851, Q14986, Q15318	Gene names	POU4F1, BRN3A, RDC1
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1).

PO4F1_MOUSE
θ value	θ > 10 (rank : 477)	NC score	0.079688 (rank : 353)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	176
SwissProt Accessions	P17208	Gene names	Pou4f1, Brn-3, Brn3, Brn3a
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0).

PO4F2_HUMAN
θ value	θ > 10 (rank : 478)	NC score	0.073399 (rank : 360)
Query Neighborhood Hits	354	Target Neighborhood Hits	310	Shared Neighborhood Hits	167
SwissProt Accessions	Q12837, Q13883, Q14987	Gene names	POU4F2, BRN3B
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B).

PO4F2_MOUSE
θ value	θ > 10 (rank : 479)	NC score	0.072587 (rank : 363)
Query Neighborhood Hits	354	Target Neighborhood Hits	312	Shared Neighborhood Hits	167
SwissProt Accessions	Q63934, Q63954	Gene names	Pou4f2, Brn3b
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2).

PO4F3_HUMAN
θ value	θ > 10 (rank : 480)	NC score	0.072713 (rank : 361)
Query Neighborhood Hits	354	Target Neighborhood Hits	307	Shared Neighborhood Hits	165
SwissProt Accessions	Q15319, O60557	Gene names	POU4F3, BRN3C
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F3_MOUSE
θ value	θ > 10 (rank : 481)	NC score	0.072711 (rank : 362)
Query Neighborhood Hits	354	Target Neighborhood Hits	311	Shared Neighborhood Hits	165
SwissProt Accessions	Q63955	Gene names	Pou4f3, Brn-3c, Brn3c
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO5F1_MOUSE
θ value	θ > 10 (rank : 482)	NC score	0.090255 (rank : 344)
Query Neighborhood Hits	354	Target Neighborhood Hits	305	Shared Neighborhood Hits	163
SwissProt Accessions	P20263, Q63843	Gene names	Pou5f1, Oct-3, Oct-4, Otf-3, Otf3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3).

PO5FL_HUMAN
θ value	θ > 10 (rank : 483)	NC score	0.052653 (rank : 410)
Query Neighborhood Hits	354	Target Neighborhood Hits	214	Shared Neighborhood Hits	122
SwissProt Accessions	Q06416, Q9BZV9	Gene names	POU5F1P1, OTF3C, POU5FLC8
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 1 (Octamer- binding protein 3-like).

PO5FM_HUMAN
θ value	θ > 10 (rank : 484)	NC score	0.052395 (rank : 411)
Query Neighborhood Hits	354	Target Neighborhood Hits	212	Shared Neighborhood Hits	124
SwissProt Accessions	Q9BZV7	Gene names	POU5F1P1, POU5FLC20
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 2.

PO6F1_HUMAN
θ value	θ > 10 (rank : 485)	NC score	0.120878 (rank : 329)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	199
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

PO6F1_MOUSE
θ value	θ > 10 (rank : 486)	NC score	0.124792 (rank : 327)
Query Neighborhood Hits	354	Target Neighborhood Hits	581	Shared Neighborhood Hits	214
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

PO6F2_HUMAN
θ value	θ > 10 (rank : 487)	NC score	0.130908 (rank : 326)
Query Neighborhood Hits	354	Target Neighborhood Hits	618	Shared Neighborhood Hits	214
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

PO6F2_MOUSE
θ value	θ > 10 (rank : 488)	NC score	0.135537 (rank : 322)
Query Neighborhood Hits	354	Target Neighborhood Hits	639	Shared Neighborhood Hits	223
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

PRG4_MOUSE
θ value	θ > 10 (rank : 489)	NC score	0.051870 (rank : 412)
Query Neighborhood Hits	354	Target Neighborhood Hits	624	Shared Neighborhood Hits	42
SwissProt Accessions	Q9JM99, Q3UEL1, Q3V198	Gene names	Prg4, Msf, Szp
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

PRR12_HUMAN
θ value	θ > 10 (rank : 490)	NC score	0.050034 (rank : 418)
Query Neighborhood Hits	354	Target Neighborhood Hits	460	Shared Neighborhood Hits	44
SwissProt Accessions	Q9ULL5, Q8N4J6	Gene names	PRR12, KIAA1205
Domain Architecture	No domain graphic available
Description	Proline-rich protein 12.

RBTN1_HUMAN
θ value	θ > 10 (rank : 491)	NC score	0.061025 (rank : 389)
Query Neighborhood Hits	354	Target Neighborhood Hits	110	Shared Neighborhood Hits	22
SwissProt Accessions	P25800, Q4VBC5	Gene names	LMO1, RBTN1, RHOM1, TTG1
Domain Architecture
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (T-cell translocation protein 1) (LIM-only protein 1).

RBTN1_MOUSE
θ value	θ > 10 (rank : 492)	NC score	0.061000 (rank : 390)
Query Neighborhood Hits	354	Target Neighborhood Hits	109	Shared Neighborhood Hits	22
SwissProt Accessions	Q924W9	Gene names	Lmo1, Rbtn1, Rhom1, Ttg1
Domain Architecture	No domain graphic available
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (LIM-only protein 1).

RBTN2_HUMAN
θ value	θ > 10 (rank : 493)	NC score	0.059102 (rank : 398)
Query Neighborhood Hits	354	Target Neighborhood Hits	114	Shared Neighborhood Hits	22
SwissProt Accessions	P25791, Q9HD58	Gene names	LMO2, RBTN2, RHOM2, TTG2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RBTN2_MOUSE
θ value	θ > 10 (rank : 494)	NC score	0.059104 (rank : 397)
Query Neighborhood Hits	354	Target Neighborhood Hits	114	Shared Neighborhood Hits	22
SwissProt Accessions	P25801	Gene names	Lmo2, Rbtn-2, Rbtn2, Rhom-2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RX_HUMAN
θ value	θ > 10 (rank : 495)	NC score	0.196039 (rank : 205)
Query Neighborhood Hits	354	Target Neighborhood Hits	423	Shared Neighborhood Hits	214
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

RX_MOUSE
θ value	θ > 10 (rank : 496)	NC score	0.187324 (rank : 229)
Query Neighborhood Hits	354	Target Neighborhood Hits	429	Shared Neighborhood Hits	206
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

SHOX2_HUMAN
θ value	θ > 10 (rank : 497)	NC score	0.206725 (rank : 176)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	194
SwissProt Accessions	O60902, O60465, O60467, O60903	Gene names	SHOX2, OG12X, SHOT
Domain Architecture
Description	Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X).

SHOX2_MOUSE
θ value	θ > 10 (rank : 498)	NC score	0.206402 (rank : 180)
Query Neighborhood Hits	354	Target Neighborhood Hits	348	Shared Neighborhood Hits	194
SwissProt Accessions	P70390, P70369	Gene names	Shox2, Og12x, Prx3
Domain Architecture
Description	Short stature homeobox protein 2 (Homeobox protein Og12X) (OG-12) (Paired family homeodomain protein Prx3).

SHOX_HUMAN
θ value	θ > 10 (rank : 499)	NC score	0.212490 (rank : 162)
Query Neighborhood Hits	354	Target Neighborhood Hits	363	Shared Neighborhood Hits	198
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

TLX1_HUMAN
θ value	θ > 10 (rank : 500)	NC score	0.189732 (rank : 227)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	198
SwissProt Accessions	P31314, O75699, Q9HCA0	Gene names	TLX1, HOX11, TCL3
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (TCL-3 proto-oncogene).

TLX1_MOUSE
θ value	θ > 10 (rank : 501)	NC score	0.192365 (rank : 219)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	196
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

TLX2_HUMAN
θ value	θ > 10 (rank : 502)	NC score	0.198132 (rank : 195)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	196
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

TLX2_MOUSE
θ value	θ > 10 (rank : 503)	NC score	0.197642 (rank : 197)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	192
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

TLX3_HUMAN
θ value	θ > 10 (rank : 504)	NC score	0.184386 (rank : 233)
Query Neighborhood Hits	354	Target Neighborhood Hits	403	Shared Neighborhood Hits	203
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

TLX3_MOUSE
θ value	θ > 10 (rank : 505)	NC score	0.200090 (rank : 192)
Query Neighborhood Hits	354	Target Neighborhood Hits	346	Shared Neighborhood Hits	199
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

VSX1_HUMAN
θ value	θ > 10 (rank : 506)	NC score	0.174036 (rank : 258)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	190
SwissProt Accessions	Q9NZR4, Q5TF40, Q5TF41, Q9HCU3, Q9NU27	Gene names	VSX1, RINX
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

VSX1_MOUSE
θ value	θ > 10 (rank : 507)	NC score	0.174891 (rank : 255)
Query Neighborhood Hits	354	Target Neighborhood Hits	356	Shared Neighborhood Hits	190
SwissProt Accessions	Q91V10	Gene names	Vsx1, Rinx
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

Hits sorted by NC score

SIX5_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	354	Target Neighborhood Hits	354	Shared Neighborhood Hits	354
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

SIX5_HUMAN
NC score	0.966856 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	354	Target Neighborhood Hits	386	Shared Neighborhood Hits	267
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX4_HUMAN
NC score	0.910125 (rank : 3)	θ value	9.41505e-74 (rank : 4)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	234
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX4_MOUSE
NC score	0.906455 (rank : 4)	θ value	2.92676e-75 (rank : 3)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	234
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

SIX1_HUMAN
NC score	0.900405 (rank : 5)	θ value	8.00737e-57 (rank : 6)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	217
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_MOUSE
NC score	0.900357 (rank : 6)	θ value	8.00737e-57 (rank : 7)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	217
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX2_HUMAN
NC score	0.898650 (rank : 7)	θ value	8.28633e-54 (rank : 9)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	218
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX6_MOUSE
NC score	0.898537 (rank : 8)	θ value	1.08223e-53 (rank : 10)
Query Neighborhood Hits	354	Target Neighborhood Hits	267	Shared Neighborhood Hits	198
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

SIX2_MOUSE
NC score	0.897738 (rank : 9)	θ value	2.10721e-57 (rank : 5)
Query Neighborhood Hits	354	Target Neighborhood Hits	376	Shared Neighborhood Hits	225
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX6_HUMAN
NC score	0.897545 (rank : 10)	θ value	3.71957e-54 (rank : 8)
Query Neighborhood Hits	354	Target Neighborhood Hits	269	Shared Neighborhood Hits	197
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

SIX3_HUMAN
NC score	0.890902 (rank : 11)	θ value	1.32293e-51 (rank : 11)
Query Neighborhood Hits	354	Target Neighborhood Hits	285	Shared Neighborhood Hits	198
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
NC score	0.890818 (rank : 12)	θ value	1.32293e-51 (rank : 12)
Query Neighborhood Hits	354	Target Neighborhood Hits	289	Shared Neighborhood Hits	198
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

IRX3_HUMAN
NC score	0.412258 (rank : 13)	θ value	0.000461057 (rank : 24)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	162
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_MOUSE
NC score	0.411608 (rank : 14)	θ value	0.000461057 (rank : 25)
Query Neighborhood Hits	354	Target Neighborhood Hits	303	Shared Neighborhood Hits	160
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX1_HUMAN
NC score	0.410359 (rank : 15)	θ value	9.29e-05 (rank : 18)
Query Neighborhood Hits	354	Target Neighborhood Hits	285	Shared Neighborhood Hits	157
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_MOUSE
NC score	0.407722 (rank : 16)	θ value	9.29e-05 (rank : 19)
Query Neighborhood Hits	354	Target Neighborhood Hits	269	Shared Neighborhood Hits	157
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX6_MOUSE
NC score	0.407161 (rank : 17)	θ value	0.000158464 (rank : 20)
Query Neighborhood Hits	354	Target Neighborhood Hits	256	Shared Neighborhood Hits	164
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX2_HUMAN
NC score	0.406470 (rank : 18)	θ value	5.44631e-05 (rank : 16)
Query Neighborhood Hits	354	Target Neighborhood Hits	358	Shared Neighborhood Hits	169
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX2_MOUSE
NC score	0.406275 (rank : 19)	θ value	0.00020696 (rank : 21)
Query Neighborhood Hits	354	Target Neighborhood Hits	264	Shared Neighborhood Hits	158
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX6_HUMAN
NC score	0.404872 (rank : 20)	θ value	0.000602161 (rank : 30)
Query Neighborhood Hits	354	Target Neighborhood Hits	262	Shared Neighborhood Hits	164
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX4_HUMAN
NC score	0.400578 (rank : 21)	θ value	0.000602161 (rank : 28)
Query Neighborhood Hits	354	Target Neighborhood Hits	276	Shared Neighborhood Hits	170
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

PBX4_MOUSE
NC score	0.400313 (rank : 22)	θ value	0.00228821 (rank : 36)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	193
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

IRX4_MOUSE
NC score	0.400162 (rank : 23)	θ value	0.000602161 (rank : 29)
Query Neighborhood Hits	354	Target Neighborhood Hits	286	Shared Neighborhood Hits	170
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

TF2LX_HUMAN
NC score	0.398472 (rank : 24)	θ value	0.00298849 (rank : 38)
Query Neighborhood Hits	354	Target Neighborhood Hits	108	Shared Neighborhood Hits	79
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

IRX5_HUMAN
NC score	0.395204 (rank : 25)	θ value	0.000461057 (rank : 26)
Query Neighborhood Hits	354	Target Neighborhood Hits	362	Shared Neighborhood Hits	162
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

MEIS3_HUMAN
NC score	0.392530 (rank : 26)	θ value	0.00298849 (rank : 37)
Query Neighborhood Hits	354	Target Neighborhood Hits	118	Shared Neighborhood Hits	102
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

IRX5_MOUSE
NC score	0.386999 (rank : 27)	θ value	0.000461057 (rank : 27)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	157
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

MEIS3_MOUSE
NC score	0.385672 (rank : 28)	θ value	0.00390308 (rank : 39)
Query Neighborhood Hits	354	Target Neighborhood Hits	118	Shared Neighborhood Hits	101
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

PBX2_MOUSE
NC score	0.384024 (rank : 29)	θ value	0.00869519 (rank : 53)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	199
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

PBX2_HUMAN
NC score	0.383894 (rank : 30)	θ value	0.00869519 (rank : 52)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	198
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

TF2LY_HUMAN
NC score	0.383133 (rank : 31)	θ value	0.00869519 (rank : 54)
Query Neighborhood Hits	354	Target Neighborhood Hits	90	Shared Neighborhood Hits	71
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

MEIS1_MOUSE
NC score	0.381078 (rank : 32)	θ value	0.00665767 (rank : 44)
Query Neighborhood Hits	354	Target Neighborhood Hits	115	Shared Neighborhood Hits	105
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS1_HUMAN
NC score	0.381076 (rank : 33)	θ value	0.00665767 (rank : 43)
Query Neighborhood Hits	354	Target Neighborhood Hits	115	Shared Neighborhood Hits	105
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

PKNX1_MOUSE
NC score	0.380171 (rank : 34)	θ value	4.1701e-05 (rank : 15)
Query Neighborhood Hits	354	Target Neighborhood Hits	103	Shared Neighborhood Hits	83
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

PKNX1_HUMAN
NC score	0.375944 (rank : 35)	θ value	7.1131e-05 (rank : 17)
Query Neighborhood Hits	354	Target Neighborhood Hits	101	Shared Neighborhood Hits	83
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

PBX1_HUMAN
NC score	0.373616 (rank : 36)	θ value	0.00869519 (rank : 50)
Query Neighborhood Hits	354	Target Neighborhood Hits	317	Shared Neighborhood Hits	195
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
NC score	0.373616 (rank : 37)	θ value	0.00869519 (rank : 51)
Query Neighborhood Hits	354	Target Neighborhood Hits	317	Shared Neighborhood Hits	195
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

MEIS2_HUMAN
NC score	0.371306 (rank : 38)	θ value	0.00665767 (rank : 45)
Query Neighborhood Hits	354	Target Neighborhood Hits	182	Shared Neighborhood Hits	112
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
NC score	0.370796 (rank : 39)	θ value	0.00665767 (rank : 46)
Query Neighborhood Hits	354	Target Neighborhood Hits	208	Shared Neighborhood Hits	116
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

PKNX2_HUMAN
NC score	0.367118 (rank : 40)	θ value	0.00035302 (rank : 22)
Query Neighborhood Hits	354	Target Neighborhood Hits	133	Shared Neighborhood Hits	86
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_MOUSE
NC score	0.365208 (rank : 41)	θ value	0.00035302 (rank : 23)
Query Neighborhood Hits	354	Target Neighborhood Hits	197	Shared Neighborhood Hits	95
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

TGIF2_MOUSE
NC score	0.359262 (rank : 42)	θ value	0.00665767 (rank : 47)
Query Neighborhood Hits	354	Target Neighborhood Hits	127	Shared Neighborhood Hits	69
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

PBX3_MOUSE
NC score	0.352944 (rank : 43)	θ value	0.0431538 (rank : 95)
Query Neighborhood Hits	354	Target Neighborhood Hits	306	Shared Neighborhood Hits	186
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_HUMAN
NC score	0.352913 (rank : 44)	θ value	0.0431538 (rank : 94)
Query Neighborhood Hits	354	Target Neighborhood Hits	306	Shared Neighborhood Hits	186
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

TGIF2_HUMAN
NC score	0.348262 (rank : 45)	θ value	0.0252991 (rank : 71)
Query Neighborhood Hits	354	Target Neighborhood Hits	94	Shared Neighborhood Hits	60
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF_MOUSE
NC score	0.345410 (rank : 46)	θ value	0.62314 (rank : 172)
Query Neighborhood Hits	354	Target Neighborhood Hits	125	Shared Neighborhood Hits	72
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF_HUMAN
NC score	0.336030 (rank : 47)	θ value	0.62314 (rank : 171)
Query Neighborhood Hits	354	Target Neighborhood Hits	109	Shared Neighborhood Hits	66
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

DBX1_MOUSE
NC score	0.294300 (rank : 48)	θ value	0.00134147 (rank : 31)
Query Neighborhood Hits	354	Target Neighborhood Hits	346	Shared Neighborhood Hits	200
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

DUX4_HUMAN
NC score	0.289143 (rank : 49)	θ value	0.0431538 (rank : 86)
Query Neighborhood Hits	354	Target Neighborhood Hits	403	Shared Neighborhood Hits	211
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

DUX1_HUMAN
NC score	0.285236 (rank : 50)	θ value	0.0736092 (rank : 111)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	198
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX5_HUMAN
NC score	0.285025 (rank : 51)	θ value	0.0736092 (rank : 112)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	198
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

BSH_MOUSE
NC score	0.276914 (rank : 52)	θ value	0.00175202 (rank : 32)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	205
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

PITX3_HUMAN
NC score	0.270277 (rank : 53)	θ value	0.0252991 (rank : 69)
Query Neighborhood Hits	354	Target Neighborhood Hits	366	Shared Neighborhood Hits	216
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_MOUSE
NC score	0.269310 (rank : 54)	θ value	0.0252991 (rank : 70)
Query Neighborhood Hits	354	Target Neighborhood Hits	380	Shared Neighborhood Hits	218
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX2_HUMAN
NC score	0.268986 (rank : 55)	θ value	0.0252991 (rank : 67)
Query Neighborhood Hits	354	Target Neighborhood Hits	381	Shared Neighborhood Hits	219
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

DLX3_HUMAN
NC score	0.268030 (rank : 56)	θ value	0.0193708 (rank : 59)
Query Neighborhood Hits	354	Target Neighborhood Hits	369	Shared Neighborhood Hits	207
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

HLX1_HUMAN
NC score	0.267685 (rank : 57)	θ value	0.0431538 (rank : 88)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	207
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

PITX2_MOUSE
NC score	0.267581 (rank : 58)	θ value	0.0252991 (rank : 68)
Query Neighborhood Hits	354	Target Neighborhood Hits	383	Shared Neighborhood Hits	216
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

DLX4_MOUSE
NC score	0.264588 (rank : 59)	θ value	8.99809 (rank : 327)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	205
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

HLX1_MOUSE
NC score	0.264174 (rank : 60)	θ value	0.0563607 (rank : 100)
Query Neighborhood Hits	354	Target Neighborhood Hits	362	Shared Neighborhood Hits	204
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

DUX3_HUMAN
NC score	0.262241 (rank : 61)	θ value	0.279714 (rank : 141)
Query Neighborhood Hits	354	Target Neighborhood Hits	312	Shared Neighborhood Hits	196
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

HXB13_HUMAN
NC score	0.261811 (rank : 62)	θ value	0.0148317 (rank : 56)
Query Neighborhood Hits	354	Target Neighborhood Hits	377	Shared Neighborhood Hits	213
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

PEPP1_HUMAN
NC score	0.261752 (rank : 63)	θ value	0.365318 (rank : 152)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	195
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

PITX1_MOUSE
NC score	0.261396 (rank : 64)	θ value	0.0431538 (rank : 97)
Query Neighborhood Hits	354	Target Neighborhood Hits	362	Shared Neighborhood Hits	211
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

ZHX3_MOUSE
NC score	0.260616 (rank : 65)	θ value	0.0252991 (rank : 72)
Query Neighborhood Hits	354	Target Neighborhood Hits	321	Shared Neighborhood Hits	175
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

DLX3_MOUSE
NC score	0.260488 (rank : 66)	θ value	0.0736092 (rank : 110)
Query Neighborhood Hits	354	Target Neighborhood Hits	367	Shared Neighborhood Hits	207
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

PITX1_HUMAN
NC score	0.260395 (rank : 67)	θ value	0.0431538 (rank : 96)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	207
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

HXB13_MOUSE
NC score	0.260006 (rank : 68)	θ value	0.0148317 (rank : 57)
Query Neighborhood Hits	354	Target Neighborhood Hits	384	Shared Neighborhood Hits	213
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

DLX6_HUMAN
NC score	0.259638 (rank : 69)	θ value	1.06291 (rank : 187)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	211
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

DLX5_MOUSE
NC score	0.259316 (rank : 70)	θ value	0.21417 (rank : 132)
Query Neighborhood Hits	354	Target Neighborhood Hits	434	Shared Neighborhood Hits	211
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX2_HUMAN
NC score	0.258622 (rank : 71)	θ value	0.0961366 (rank : 120)
Query Neighborhood Hits	354	Target Neighborhood Hits	355	Shared Neighborhood Hits	206
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

DLX5_HUMAN
NC score	0.258482 (rank : 72)	θ value	0.163984 (rank : 126)
Query Neighborhood Hits	354	Target Neighborhood Hits	405	Shared Neighborhood Hits	208
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX2_MOUSE
NC score	0.258035 (rank : 73)	θ value	0.0961366 (rank : 121)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	206
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

DLX1_MOUSE
NC score	0.257833 (rank : 74)	θ value	0.813845 (rank : 175)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	208
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_HUMAN
NC score	0.257257 (rank : 75)	θ value	0.813845 (rank : 174)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	208
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

NKX61_MOUSE
NC score	0.256729 (rank : 76)	θ value	0.365318 (rank : 151)
Query Neighborhood Hits	354	Target Neighborhood Hits	439	Shared Neighborhood Hits	218
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

PROP1_MOUSE
NC score	0.256675 (rank : 77)	θ value	0.365318 (rank : 153)
Query Neighborhood Hits	354	Target Neighborhood Hits	361	Shared Neighborhood Hits	209
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PROP1_HUMAN
NC score	0.256382 (rank : 78)	θ value	0.279714 (rank : 143)
Query Neighborhood Hits	354	Target Neighborhood Hits	354	Shared Neighborhood Hits	210
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

HXD13_HUMAN
NC score	0.256249 (rank : 79)	θ value	0.0193708 (rank : 61)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	207
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
NC score	0.255743 (rank : 80)	θ value	0.0193708 (rank : 62)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	205
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

ZHX2_HUMAN
NC score	0.255692 (rank : 81)	θ value	0.00869519 (rank : 55)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	147
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ZHX3_HUMAN
NC score	0.255492 (rank : 82)	θ value	0.0330416 (rank : 81)
Query Neighborhood Hits	354	Target Neighborhood Hits	331	Shared Neighborhood Hits	175
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

GSCL_HUMAN
NC score	0.254209 (rank : 83)	θ value	0.0563607 (rank : 99)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	194
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

HHEX_HUMAN
NC score	0.253054 (rank : 84)	θ value	0.0431538 (rank : 87)
Query Neighborhood Hits	354	Target Neighborhood Hits	358	Shared Neighborhood Hits	195
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

GSCL_MOUSE
NC score	0.251850 (rank : 85)	θ value	1.06291 (rank : 189)
Query Neighborhood Hits	354	Target Neighborhood Hits	339	Shared Neighborhood Hits	196
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

HHEX_MOUSE
NC score	0.251350 (rank : 86)	θ value	0.0330416 (rank : 73)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	198
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

NKX26_MOUSE
NC score	0.251018 (rank : 87)	θ value	0.0252991 (rank : 66)
Query Neighborhood Hits	354	Target Neighborhood Hits	343	Shared Neighborhood Hits	195
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

CDX4_HUMAN
NC score	0.250872 (rank : 88)	θ value	0.00228821 (rank : 34)
Query Neighborhood Hits	354	Target Neighborhood Hits	366	Shared Neighborhood Hits	203
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

DLX4_HUMAN
NC score	0.250850 (rank : 89)	θ value	θ > 10 (rank : 368)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	207
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

CDX1_MOUSE
NC score	0.250520 (rank : 90)	θ value	0.163984 (rank : 125)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	202
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

ZHX2_MOUSE
NC score	0.249028 (rank : 91)	θ value	0.00175202 (rank : 33)
Query Neighborhood Hits	354	Target Neighborhood Hits	435	Shared Neighborhood Hits	156
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

CDX4_MOUSE
NC score	0.247992 (rank : 92)	θ value	0.00509761 (rank : 40)
Query Neighborhood Hits	354	Target Neighborhood Hits	378	Shared Neighborhood Hits	203
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

NKX28_HUMAN
NC score	0.247489 (rank : 93)	θ value	0.0736092 (rank : 116)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	211
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

NKX61_HUMAN
NC score	0.246919 (rank : 94)	θ value	0.813845 (rank : 180)
Query Neighborhood Hits	354	Target Neighborhood Hits	431	Shared Neighborhood Hits	220
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

CDX1_HUMAN
NC score	0.245767 (rank : 95)	θ value	0.163984 (rank : 124)
Query Neighborhood Hits	354	Target Neighborhood Hits	382	Shared Neighborhood Hits	201
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

ISL1_HUMAN
NC score	0.245654 (rank : 96)	θ value	0.0330416 (rank : 76)
Query Neighborhood Hits	354	Target Neighborhood Hits	421	Shared Neighborhood Hits	190
SwissProt Accessions	P61371, P20663, P47894	Gene names	ISL1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL1_MOUSE
NC score	0.245654 (rank : 97)	θ value	0.0330416 (rank : 77)
Query Neighborhood Hits	354	Target Neighborhood Hits	421	Shared Neighborhood Hits	190
SwissProt Accessions	P61372, P20663, P47894, Q812D8	Gene names	Isl1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

LBX1_HUMAN
NC score	0.245153 (rank : 98)	θ value	5.27518 (rank : 288)
Query Neighborhood Hits	354	Target Neighborhood Hits	357	Shared Neighborhood Hits	211
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

CDX2_MOUSE
NC score	0.245078 (rank : 99)	θ value	0.0431538 (rank : 84)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	186
SwissProt Accessions	P43241	Gene names	Cdx2, Cdx-2
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2).

HXA13_MOUSE
NC score	0.244085 (rank : 100)	θ value	0.00869519 (rank : 49)
Query Neighborhood Hits	354	Target Neighborhood Hits	351	Shared Neighborhood Hits	210
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

HXA13_HUMAN
NC score	0.243857 (rank : 101)	θ value	0.00869519 (rank : 48)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	212
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

HXC13_MOUSE
NC score	0.242115 (rank : 102)	θ value	0.163984 (rank : 128)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	202
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

HXC13_HUMAN
NC score	0.242114 (rank : 103)	θ value	0.163984 (rank : 127)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	202
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

LBX1_MOUSE
NC score	0.242101 (rank : 104)	θ value	5.27518 (rank : 289)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	209
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

GSC_HUMAN
NC score	0.241939 (rank : 105)	θ value	1.06291 (rank : 190)
Query Neighborhood Hits	354	Target Neighborhood Hits	369	Shared Neighborhood Hits	210
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

CDX2_HUMAN
NC score	0.241459 (rank : 106)	θ value	0.0431538 (rank : 83)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	185
SwissProt Accessions	Q99626, O00503, Q969L8	Gene names	CDX2, CDX3
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3).

ISL2_MOUSE
NC score	0.241249 (rank : 107)	θ value	0.0330416 (rank : 79)
Query Neighborhood Hits	354	Target Neighborhood Hits	426	Shared Neighborhood Hits	193
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

ISL2_HUMAN
NC score	0.241066 (rank : 108)	θ value	0.0330416 (rank : 78)
Query Neighborhood Hits	354	Target Neighborhood Hits	435	Shared Neighborhood Hits	196
SwissProt Accessions	Q96A47	Gene names	ISL2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

HME2_MOUSE
NC score	0.240329 (rank : 109)	θ value	0.0563607 (rank : 102)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	209
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

HME2_HUMAN
NC score	0.240018 (rank : 110)	θ value	0.0563607 (rank : 101)
Query Neighborhood Hits	354	Target Neighborhood Hits	355	Shared Neighborhood Hits	209
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

NKX28_MOUSE
NC score	0.240005 (rank : 111)	θ value	0.0736092 (rank : 117)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	209
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

GSC_MOUSE
NC score	0.239878 (rank : 112)	θ value	2.36792 (rank : 233)
Query Neighborhood Hits	354	Target Neighborhood Hits	368	Shared Neighborhood Hits	207
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

TITF1_HUMAN
NC score	0.236924 (rank : 113)	θ value	4.03905 (rank : 279)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	197
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

TITF1_MOUSE
NC score	0.235593 (rank : 114)	θ value	4.03905 (rank : 280)
Query Neighborhood Hits	354	Target Neighborhood Hits	335	Shared Neighborhood Hits	197
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

NKX22_MOUSE
NC score	0.234541 (rank : 115)	θ value	0.365318 (rank : 149)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	201
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX25_MOUSE
NC score	0.234383 (rank : 116)	θ value	0.365318 (rank : 150)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	201
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

EMX2_MOUSE
NC score	0.234324 (rank : 117)	θ value	1.38821 (rank : 203)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	207
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HME1_MOUSE
NC score	0.234305 (rank : 118)	θ value	0.0330416 (rank : 75)
Query Neighborhood Hits	354	Target Neighborhood Hits	397	Shared Neighborhood Hits	212
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

HME1_HUMAN
NC score	0.234297 (rank : 119)	θ value	0.0330416 (rank : 74)
Query Neighborhood Hits	354	Target Neighborhood Hits	384	Shared Neighborhood Hits	207
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

EMX2_HUMAN
NC score	0.234057 (rank : 120)	θ value	1.38821 (rank : 202)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	207
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

NKX22_HUMAN
NC score	0.233937 (rank : 121)	θ value	0.365318 (rank : 148)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	198
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX24_HUMAN
NC score	0.232210 (rank : 122)	θ value	4.03905 (rank : 271)
Query Neighborhood Hits	354	Target Neighborhood Hits	366	Shared Neighborhood Hits	200
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX25_HUMAN
NC score	0.232057 (rank : 123)	θ value	0.62314 (rank : 168)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	203
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

BARX2_HUMAN
NC score	0.231242 (rank : 124)	θ value	1.06291 (rank : 185)
Query Neighborhood Hits	354	Target Neighborhood Hits	387	Shared Neighborhood Hits	206
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

NKX23_HUMAN
NC score	0.229321 (rank : 125)	θ value	1.06291 (rank : 192)
Query Neighborhood Hits	354	Target Neighborhood Hits	346	Shared Neighborhood Hits	205
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

ZFHX2_HUMAN
NC score	0.229179 (rank : 126)	θ value	0.0193708 (rank : 63)
Query Neighborhood Hits	354	Target Neighborhood Hits	1178	Shared Neighborhood Hits	242
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

ALX3_MOUSE
NC score	0.228929 (rank : 127)	θ value	6.88961 (rank : 302)
Query Neighborhood Hits	354	Target Neighborhood Hits	386	Shared Neighborhood Hits	214
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

NKX23_MOUSE
NC score	0.228858 (rank : 128)	θ value	1.06291 (rank : 193)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	201
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

BARX2_MOUSE
NC score	0.227188 (rank : 129)	θ value	1.38821 (rank : 200)
Query Neighborhood Hits	354	Target Neighborhood Hits	335	Shared Neighborhood Hits	202
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

EMX1_HUMAN
NC score	0.226082 (rank : 130)	θ value	0.47712 (rank : 157)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	206
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

BARX1_HUMAN
NC score	0.225207 (rank : 131)	θ value	0.0431538 (rank : 82)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	192
SwissProt Accessions	Q9HBU1	Gene names	BARX1
Domain Architecture
Description	Homeobox protein BarH-like 1.

HXB1_HUMAN
NC score	0.225167 (rank : 132)	θ value	0.0431538 (rank : 89)
Query Neighborhood Hits	354	Target Neighborhood Hits	356	Shared Neighborhood Hits	198
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

NKX24_MOUSE
NC score	0.225137 (rank : 133)	θ value	4.03905 (rank : 272)
Query Neighborhood Hits	354	Target Neighborhood Hits	356	Shared Neighborhood Hits	199
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

BARX1_MOUSE
NC score	0.224647 (rank : 134)	θ value	0.0736092 (rank : 109)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	192
SwissProt Accessions	Q9ER42, O09066, P70159, Q9ERV2	Gene names	Barx1
Domain Architecture
Description	Homeobox protein BarH-like 1.

ZHX1_MOUSE
NC score	0.224400 (rank : 135)	θ value	0.21417 (rank : 139)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	170
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

HXB1_MOUSE
NC score	0.223379 (rank : 136)	θ value	0.0736092 (rank : 115)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	198
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

BARH2_HUMAN
NC score	0.222823 (rank : 137)	θ value	1.38821 (rank : 198)
Query Neighborhood Hits	354	Target Neighborhood Hits	419	Shared Neighborhood Hits	208
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

HMX3_MOUSE
NC score	0.222737 (rank : 138)	θ value	2.36792 (rank : 235)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	196
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

ZHX1_HUMAN
NC score	0.222726 (rank : 139)	θ value	0.21417 (rank : 138)
Query Neighborhood Hits	354	Target Neighborhood Hits	307	Shared Neighborhood Hits	166
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

BARH2_MOUSE
NC score	0.222671 (rank : 140)	θ value	1.38821 (rank : 199)
Query Neighborhood Hits	354	Target Neighborhood Hits	397	Shared Neighborhood Hits	206
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

ALX3_HUMAN
NC score	0.222123 (rank : 141)	θ value	8.99809 (rank : 323)
Query Neighborhood Hits	354	Target Neighborhood Hits	380	Shared Neighborhood Hits	214
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

HMX2_MOUSE
NC score	0.220818 (rank : 142)	θ value	1.81305 (rank : 221)
Query Neighborhood Hits	354	Target Neighborhood Hits	354	Shared Neighborhood Hits	204
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

BARH1_HUMAN
NC score	0.217623 (rank : 143)	θ value	0.21417 (rank : 129)
Query Neighborhood Hits	354	Target Neighborhood Hits	373	Shared Neighborhood Hits	209
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARH1_MOUSE
NC score	0.217363 (rank : 144)	θ value	0.21417 (rank : 130)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	205
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

OTX1_HUMAN
NC score	0.216625 (rank : 145)	θ value	1.38821 (rank : 209)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	209
SwissProt Accessions	P32242, Q53TG6	Gene names	OTX1
Domain Architecture
Description	Homeobox protein OTX1.

OTP_MOUSE
NC score	0.216533 (rank : 146)	θ value	θ > 10 (rank : 455)
Query Neighborhood Hits	354	Target Neighborhood Hits	387	Shared Neighborhood Hits	208
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

PRRX2_HUMAN
NC score	0.216484 (rank : 147)	θ value	4.03905 (rank : 274)
Query Neighborhood Hits	354	Target Neighborhood Hits	348	Shared Neighborhood Hits	197
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

LHX5_HUMAN
NC score	0.216258 (rank : 148)	θ value	0.0431538 (rank : 92)
Query Neighborhood Hits	354	Target Neighborhood Hits	453	Shared Neighborhood Hits	207
SwissProt Accessions	Q9H2C1	Gene names	LHX5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

PRRX2_MOUSE
NC score	0.216147 (rank : 149)	θ value	4.03905 (rank : 275)
Query Neighborhood Hits	354	Target Neighborhood Hits	351	Shared Neighborhood Hits	198
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

PHX2B_HUMAN
NC score	0.215349 (rank : 150)	θ value	θ > 10 (rank : 461)
Query Neighborhood Hits	354	Target Neighborhood Hits	407	Shared Neighborhood Hits	205
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
NC score	0.215349 (rank : 151)	θ value	θ > 10 (rank : 462)
Query Neighborhood Hits	354	Target Neighborhood Hits	407	Shared Neighborhood Hits	205
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

NKX12_MOUSE
NC score	0.215295 (rank : 152)	θ value	0.62314 (rank : 167)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	191
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

PHX2A_MOUSE
NC score	0.215187 (rank : 153)	θ value	θ > 10 (rank : 460)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	195
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

PRRXL_MOUSE
NC score	0.214774 (rank : 154)	θ value	6.88961 (rank : 321)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	209
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

PHX2A_HUMAN
NC score	0.214559 (rank : 155)	θ value	θ > 10 (rank : 459)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	196
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

VAX1_HUMAN
NC score	0.214322 (rank : 156)	θ value	2.36792 (rank : 241)
Query Neighborhood Hits	354	Target Neighborhood Hits	355	Shared Neighborhood Hits	199
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

LHX1_MOUSE
NC score	0.213876 (rank : 157)	θ value	0.0431538 (rank : 91)
Query Neighborhood Hits	354	Target Neighborhood Hits	453	Shared Neighborhood Hits	206
SwissProt Accessions	P63006, P36199	Gene names	Lhx1, Lim-1, Lim1
Domain Architecture	No domain graphic available
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX5_MOUSE
NC score	0.213806 (rank : 158)	θ value	0.0431538 (rank : 93)
Query Neighborhood Hits	354	Target Neighborhood Hits	456	Shared Neighborhood Hits	208
SwissProt Accessions	P61375, P50459	Gene names	Lhx5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

OTX1_MOUSE
NC score	0.213760 (rank : 159)	θ value	5.27518 (rank : 294)
Query Neighborhood Hits	354	Target Neighborhood Hits	372	Shared Neighborhood Hits	207
SwissProt Accessions	P80205	Gene names	Otx1, Otx-1
Domain Architecture
Description	Homeobox protein OTX1.

VAX1_MOUSE
NC score	0.213391 (rank : 160)	θ value	2.36792 (rank : 242)
Query Neighborhood Hits	354	Target Neighborhood Hits	351	Shared Neighborhood Hits	199
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

LHX1_HUMAN
NC score	0.213283 (rank : 161)	θ value	0.0431538 (rank : 90)
Query Neighborhood Hits	354	Target Neighborhood Hits	453	Shared Neighborhood Hits	206
SwissProt Accessions	P48742, Q3MIW0	Gene names	LHX1, LIM1
Domain Architecture
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

SHOX_HUMAN
NC score	0.212490 (rank : 162)	θ value	θ > 10 (rank : 499)
Query Neighborhood Hits	354	Target Neighborhood Hits	363	Shared Neighborhood Hits	198
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

ALX4_MOUSE
NC score	0.211154 (rank : 163)	θ value	8.99809 (rank : 324)
Query Neighborhood Hits	354	Target Neighborhood Hits	369	Shared Neighborhood Hits	213
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

MSX2_HUMAN
NC score	0.210641 (rank : 164)	θ value	8.99809 (rank : 337)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	195
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

LHX4_HUMAN
NC score	0.210348 (rank : 165)	θ value	0.62314 (rank : 165)
Query Neighborhood Hits	354	Target Neighborhood Hits	455	Shared Neighborhood Hits	210
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

MSX1_HUMAN
NC score	0.210285 (rank : 166)	θ value	8.99809 (rank : 335)
Query Neighborhood Hits	354	Target Neighborhood Hits	374	Shared Neighborhood Hits	196
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

MSX2_MOUSE
NC score	0.209694 (rank : 167)	θ value	8.99809 (rank : 338)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	193
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

MSX1_MOUSE
NC score	0.209668 (rank : 168)	θ value	8.99809 (rank : 336)
Query Neighborhood Hits	354	Target Neighborhood Hits	322	Shared Neighborhood Hits	191
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

HXA1_MOUSE
NC score	0.209398 (rank : 169)	θ value	5.27518 (rank : 287)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	198
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

CRX_HUMAN
NC score	0.209022 (rank : 170)	θ value	θ > 10 (rank : 363)
Query Neighborhood Hits	354	Target Neighborhood Hits	360	Shared Neighborhood Hits	203
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

NKX31_HUMAN
NC score	0.208986 (rank : 171)	θ value	5.27518 (rank : 291)
Query Neighborhood Hits	354	Target Neighborhood Hits	331	Shared Neighborhood Hits	186
SwissProt Accessions	Q99801, O15465, Q9H2P4, Q9H2P5, Q9H2P6, Q9H2P7, Q9HBG0	Gene names	NKX3-1, NKX3.1, NKX3A
Domain Architecture
Description	Homeobox protein Nkx-3.1.

LHX4_MOUSE
NC score	0.208490 (rank : 172)	θ value	0.62314 (rank : 166)
Query Neighborhood Hits	354	Target Neighborhood Hits	457	Shared Neighborhood Hits	210
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

PRRX1_HUMAN
NC score	0.208474 (rank : 173)	θ value	8.99809 (rank : 349)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	199
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

PRRX1_MOUSE
NC score	0.207980 (rank : 174)	θ value	8.99809 (rank : 350)
Query Neighborhood Hits	354	Target Neighborhood Hits	346	Shared Neighborhood Hits	197
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

HLXB9_HUMAN
NC score	0.207104 (rank : 175)	θ value	6.88961 (rank : 311)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	198
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

SHOX2_HUMAN
NC score	0.206725 (rank : 176)	θ value	θ > 10 (rank : 497)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	194
SwissProt Accessions	O60902, O60465, O60467, O60903	Gene names	SHOX2, OG12X, SHOT
Domain Architecture
Description	Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X).

ALX4_HUMAN
NC score	0.206722 (rank : 177)	θ value	θ > 10 (rank : 355)
Query Neighborhood Hits	354	Target Neighborhood Hits	394	Shared Neighborhood Hits	214
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

CRX_MOUSE
NC score	0.206622 (rank : 178)	θ value	θ > 10 (rank : 364)
Query Neighborhood Hits	354	Target Neighborhood Hits	359	Shared Neighborhood Hits	198
SwissProt Accessions	O54751	Gene names	Crx
Domain Architecture
Description	Cone-rod homeobox protein.

PEPP2_HUMAN
NC score	0.206608 (rank : 179)	θ value	8.99809 (rank : 345)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	186
SwissProt Accessions	Q9BQY4, Q9BR00	Gene names	PEPP2, THG1
Domain Architecture
Description	Paired-like homeobox protein PEPP-2 (Testis homeobox gene 1).

SHOX2_MOUSE
NC score	0.206402 (rank : 180)	θ value	θ > 10 (rank : 498)
Query Neighborhood Hits	354	Target Neighborhood Hits	348	Shared Neighborhood Hits	194
SwissProt Accessions	P70390, P70369	Gene names	Shox2, Og12x, Prx3
Domain Architecture
Description	Short stature homeobox protein 2 (Homeobox protein Og12X) (OG-12) (Paired family homeodomain protein Prx3).

HLXB9_MOUSE
NC score	0.205493 (rank : 181)	θ value	6.88961 (rank : 312)
Query Neighborhood Hits	354	Target Neighborhood Hits	354	Shared Neighborhood Hits	205
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

PAX3_HUMAN
NC score	0.205203 (rank : 182)	θ value	1.38821 (rank : 210)
Query Neighborhood Hits	354	Target Neighborhood Hits	513	Shared Neighborhood Hits	224
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

HXA1_HUMAN
NC score	0.204524 (rank : 183)	θ value	5.27518 (rank : 286)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	195
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

PAX3_MOUSE
NC score	0.204260 (rank : 184)	θ value	0.47712 (rank : 159)
Query Neighborhood Hits	354	Target Neighborhood Hits	478	Shared Neighborhood Hits	221
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

PAX7_HUMAN
NC score	0.203497 (rank : 185)	θ value	6.88961 (rank : 317)
Query Neighborhood Hits	354	Target Neighborhood Hits	456	Shared Neighborhood Hits	220
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
NC score	0.203306 (rank : 186)	θ value	6.88961 (rank : 318)
Query Neighborhood Hits	354	Target Neighborhood Hits	422	Shared Neighborhood Hits	221
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

NKX32_HUMAN
NC score	0.203048 (rank : 187)	θ value	8.99809 (rank : 341)
Query Neighborhood Hits	354	Target Neighborhood Hits	323	Shared Neighborhood Hits	191
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

NKX31_MOUSE
NC score	0.203036 (rank : 188)	θ value	5.27518 (rank : 292)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	187
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

NKX32_MOUSE
NC score	0.202106 (rank : 189)	θ value	8.99809 (rank : 342)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	190
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

MSX3_MOUSE
NC score	0.201473 (rank : 190)	θ value	θ > 10 (rank : 452)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	192
SwissProt Accessions	P70354, P70246, Q03360, Q80W10	Gene names	Msx3, Msx-3
Domain Architecture
Description	Homeobox protein MSX-3.

OTX2_MOUSE
NC score	0.201299 (rank : 191)	θ value	8.99809 (rank : 344)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	196
SwissProt Accessions	P80206	Gene names	Otx2, Otx-2
Domain Architecture
Description	Homeobox protein OTX2.

TLX3_MOUSE
NC score	0.200090 (rank : 192)	θ value	θ > 10 (rank : 505)
Query Neighborhood Hits	354	Target Neighborhood Hits	346	Shared Neighborhood Hits	199
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

VAX2_HUMAN
NC score	0.198858 (rank : 193)	θ value	8.99809 (rank : 352)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	192
SwissProt Accessions	Q9UIW0	Gene names	VAX2
Domain Architecture
Description	Ventral anterior homeobox 2.

LHX2_MOUSE
NC score	0.198311 (rank : 194)	θ value	4.03905 (rank : 270)
Query Neighborhood Hits	354	Target Neighborhood Hits	431	Shared Neighborhood Hits	206
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

TLX2_HUMAN
NC score	0.198132 (rank : 195)	θ value	θ > 10 (rank : 502)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	196
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

ARX_HUMAN
NC score	0.198002 (rank : 196)	θ value	θ > 10 (rank : 356)
Query Neighborhood Hits	354	Target Neighborhood Hits	401	Shared Neighborhood Hits	203
SwissProt Accessions	Q96QS3	Gene names	ARX
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

TLX2_MOUSE
NC score	0.197642 (rank : 197)	θ value	θ > 10 (rank : 503)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	192
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

GSH2_HUMAN
NC score	0.196886 (rank : 198)	θ value	0.47712 (rank : 158)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	195
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

LHX3_HUMAN
NC score	0.196837 (rank : 199)	θ value	0.813845 (rank : 177)
Query Neighborhood Hits	354	Target Neighborhood Hits	474	Shared Neighborhood Hits	220
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

HESX1_MOUSE
NC score	0.196792 (rank : 200)	θ value	8.99809 (rank : 331)
Query Neighborhood Hits	354	Target Neighborhood Hits	331	Shared Neighborhood Hits	192
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

VAX2_MOUSE
NC score	0.196674 (rank : 201)	θ value	8.99809 (rank : 353)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	192
SwissProt Accessions	Q9WTP9	Gene names	Vax2, Vex
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 2 (Ventral retina homeodomain protein).

OTX2_HUMAN
NC score	0.196377 (rank : 202)	θ value	8.99809 (rank : 343)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	192
SwissProt Accessions	P32243, Q6GTV3, Q9HAW3, Q9P2R1	Gene names	OTX2
Domain Architecture
Description	Homeobox protein OTX2.

LHX2_HUMAN
NC score	0.196374 (rank : 203)	θ value	4.03905 (rank : 269)
Query Neighborhood Hits	354	Target Neighborhood Hits	432	Shared Neighborhood Hits	206
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

ARX_MOUSE
NC score	0.196309 (rank : 204)	θ value	θ > 10 (rank : 357)
Query Neighborhood Hits	354	Target Neighborhood Hits	398	Shared Neighborhood Hits	201
SwissProt Accessions	O35085, Q9QYT4	Gene names	Arx
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

RX_HUMAN
NC score	0.196039 (rank : 205)	θ value	θ > 10 (rank : 495)
Query Neighborhood Hits	354	Target Neighborhood Hits	423	Shared Neighborhood Hits	214
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

HXD1_MOUSE
NC score	0.195960 (rank : 206)	θ value	4.03905 (rank : 267)
Query Neighborhood Hits	354	Target Neighborhood Hits	381	Shared Neighborhood Hits	196
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

HESX1_HUMAN
NC score	0.195392 (rank : 207)	θ value	8.99809 (rank : 330)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	190
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

ESX1L_HUMAN
NC score	0.195296 (rank : 208)	θ value	θ > 10 (rank : 369)
Query Neighborhood Hits	354	Target Neighborhood Hits	498	Shared Neighborhood Hits	212
SwissProt Accessions	Q8N693, Q7Z6K7	Gene names	ESX1L, ESX1R
Domain Architecture
Description	Extraembryonic, spermatogenesis, homeobox 1-like protein.

CART1_HUMAN
NC score	0.193971 (rank : 209)	θ value	6.88961 (rank : 304)
Query Neighborhood Hits	354	Target Neighborhood Hits	348	Shared Neighborhood Hits	202
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

GSH2_MOUSE
NC score	0.193859 (rank : 210)	θ value	1.81305 (rank : 220)
Query Neighborhood Hits	354	Target Neighborhood Hits	319	Shared Neighborhood Hits	194
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HXC8_MOUSE
NC score	0.193736 (rank : 211)	θ value	θ > 10 (rank : 422)
Query Neighborhood Hits	354	Target Neighborhood Hits	327	Shared Neighborhood Hits	200
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC8_HUMAN
NC score	0.193703 (rank : 212)	θ value	θ > 10 (rank : 421)
Query Neighborhood Hits	354	Target Neighborhood Hits	327	Shared Neighborhood Hits	200
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

LHX9_HUMAN
NC score	0.193072 (rank : 213)	θ value	2.36792 (rank : 237)
Query Neighborhood Hits	354	Target Neighborhood Hits	444	Shared Neighborhood Hits	202
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

EVX2_MOUSE
NC score	0.192961 (rank : 214)	θ value	θ > 10 (rank : 373)
Query Neighborhood Hits	354	Target Neighborhood Hits	327	Shared Neighborhood Hits	189
SwissProt Accessions	P49749	Gene names	Evx2, Evx-2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

EVX1_MOUSE
NC score	0.192883 (rank : 215)	θ value	θ > 10 (rank : 371)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	191
SwissProt Accessions	P23683	Gene names	Evx1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

PAX4_HUMAN
NC score	0.192787 (rank : 216)	θ value	3.0926 (rank : 254)
Query Neighborhood Hits	354	Target Neighborhood Hits	367	Shared Neighborhood Hits	209
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

HXB8_MOUSE
NC score	0.192525 (rank : 217)	θ value	θ > 10 (rank : 408)
Query Neighborhood Hits	354	Target Neighborhood Hits	325	Shared Neighborhood Hits	195
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

LHX9_MOUSE
NC score	0.192456 (rank : 218)	θ value	2.36792 (rank : 238)
Query Neighborhood Hits	354	Target Neighborhood Hits	445	Shared Neighborhood Hits	202
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

TLX1_MOUSE
NC score	0.192365 (rank : 219)	θ value	θ > 10 (rank : 501)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	196
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

EVX2_HUMAN
NC score	0.192346 (rank : 220)	θ value	θ > 10 (rank : 372)
Query Neighborhood Hits	354	Target Neighborhood Hits	325	Shared Neighborhood Hits	186
SwissProt Accessions	Q03828	Gene names	EVX2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

EVX1_HUMAN
NC score	0.192249 (rank : 221)	θ value	θ > 10 (rank : 370)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	193
SwissProt Accessions	P49640	Gene names	EVX1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

CART1_MOUSE
NC score	0.191804 (rank : 222)	θ value	θ > 10 (rank : 358)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	199
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

LHX3_MOUSE
NC score	0.191384 (rank : 223)	θ value	0.813845 (rank : 178)
Query Neighborhood Hits	354	Target Neighborhood Hits	451	Shared Neighborhood Hits	209
SwissProt Accessions	P50481, Q61800, Q61801	Gene names	Lhx3, Lim-3, Lim3, Plim
Domain Architecture
Description	LIM/homeobox protein Lhx3 (Homeobox protein LIM-3) (Homeobox protein P-LIM) (LIM homeobox protein 3).

HXB8_HUMAN
NC score	0.190264 (rank : 224)	θ value	θ > 10 (rank : 407)
Query Neighborhood Hits	354	Target Neighborhood Hits	324	Shared Neighborhood Hits	194
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

LMX1A_MOUSE
NC score	0.189993 (rank : 225)	θ value	0.0563607 (rank : 104)
Query Neighborhood Hits	354	Target Neighborhood Hits	405	Shared Neighborhood Hits	191
SwissProt Accessions	Q9JKU8	Gene names	Lmx1a
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

HXD1_HUMAN
NC score	0.189865 (rank : 226)	θ value	4.03905 (rank : 266)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	198
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

TLX1_HUMAN
NC score	0.189732 (rank : 227)	θ value	θ > 10 (rank : 500)
Query Neighborhood Hits	354	Target Neighborhood Hits	347	Shared Neighborhood Hits	198
SwissProt Accessions	P31314, O75699, Q9HCA0	Gene names	TLX1, HOX11, TCL3
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (TCL-3 proto-oncogene).

LMX1A_HUMAN
NC score	0.189579 (rank : 228)	θ value	0.0563607 (rank : 103)
Query Neighborhood Hits	354	Target Neighborhood Hits	406	Shared Neighborhood Hits	192
SwissProt Accessions	Q8TE12, Q8TE11	Gene names	LMX1A
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

RX_MOUSE
NC score	0.187324 (rank : 229)	θ value	θ > 10 (rank : 496)
Query Neighborhood Hits	354	Target Neighborhood Hits	429	Shared Neighborhood Hits	206
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

HXC11_HUMAN
NC score	0.187155 (rank : 230)	θ value	θ > 10 (rank : 413)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	196
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

HXD11_MOUSE
NC score	0.185978 (rank : 231)	θ value	θ > 10 (rank : 428)
Query Neighborhood Hits	354	Target Neighborhood Hits	376	Shared Neighborhood Hits	204
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HXD11_HUMAN
NC score	0.185604 (rank : 232)	θ value	θ > 10 (rank : 427)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	201
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

TLX3_HUMAN
NC score	0.184386 (rank : 233)	θ value	θ > 10 (rank : 504)
Query Neighborhood Hits	354	Target Neighborhood Hits	403	Shared Neighborhood Hits	203
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

IPF1_HUMAN
NC score	0.183870 (rank : 234)	θ value	θ > 10 (rank : 439)
Query Neighborhood Hits	354	Target Neighborhood Hits	330	Shared Neighborhood Hits	193
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

IPF1_MOUSE
NC score	0.182982 (rank : 235)	θ value	θ > 10 (rank : 440)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	195
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

MEOX2_MOUSE
NC score	0.182943 (rank : 236)	θ value	θ > 10 (rank : 451)
Query Neighborhood Hits	354	Target Neighborhood Hits	341	Shared Neighborhood Hits	195
SwissProt Accessions	P32443, Q544T6	Gene names	Meox2, Gax, Mox-2, Mox2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2).

MEOX2_HUMAN
NC score	0.182550 (rank : 237)	θ value	θ > 10 (rank : 450)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	193
SwissProt Accessions	P50222, O75263, Q9UPL6	Gene names	MEOX2, GAX, MOX2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox).

HXA2_HUMAN
NC score	0.182497 (rank : 238)	θ value	θ > 10 (rank : 386)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	189
SwissProt Accessions	O43364	Gene names	HOXA2
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A2.

MEOX1_MOUSE
NC score	0.182411 (rank : 239)	θ value	3.0926 (rank : 253)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	197
SwissProt Accessions	P32442	Gene names	Meox1, Mox-1, Mox1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

HXA3_MOUSE
NC score	0.181924 (rank : 240)	θ value	3.0926 (rank : 248)
Query Neighborhood Hits	354	Target Neighborhood Hits	558	Shared Neighborhood Hits	228
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

HXD12_MOUSE
NC score	0.181384 (rank : 241)	θ value	θ > 10 (rank : 430)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	192
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

HXA3_HUMAN
NC score	0.180477 (rank : 242)	θ value	3.0926 (rank : 247)
Query Neighborhood Hits	354	Target Neighborhood Hits	535	Shared Neighborhood Hits	226
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

MEOX1_HUMAN
NC score	0.180166 (rank : 243)	θ value	6.88961 (rank : 315)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	193
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

HXB2_MOUSE
NC score	0.179762 (rank : 244)	θ value	1.06291 (rank : 191)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	190
SwissProt Accessions	P0C1T1	Gene names	Hoxb2, Hox-2.8
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-B2 (Hox-2.8).

HXA2_MOUSE
NC score	0.179057 (rank : 245)	θ value	θ > 10 (rank : 387)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	187
SwissProt Accessions	P31245, Q149U3, Q920T8	Gene names	Hoxa2, Hox-1.11, Hoxa-2
Domain Architecture
Description	Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11).

PAX4_MOUSE
NC score	0.178894 (rank : 246)	θ value	θ > 10 (rank : 456)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	208
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

HXD8_HUMAN
NC score	0.178862 (rank : 247)	θ value	θ > 10 (rank : 435)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	194
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HXD12_HUMAN
NC score	0.178479 (rank : 248)	θ value	θ > 10 (rank : 429)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	187
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXA11_HUMAN
NC score	0.178247 (rank : 249)	θ value	θ > 10 (rank : 384)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	183
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

GSHI_MOUSE
NC score	0.178080 (rank : 250)	θ value	θ > 10 (rank : 377)
Query Neighborhood Hits	354	Target Neighborhood Hits	313	Shared Neighborhood Hits	192
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

HXD8_MOUSE
NC score	0.177306 (rank : 251)	θ value	θ > 10 (rank : 436)
Query Neighborhood Hits	354	Target Neighborhood Hits	333	Shared Neighborhood Hits	194
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXA11_MOUSE
NC score	0.177205 (rank : 252)	θ value	θ > 10 (rank : 385)
Query Neighborhood Hits	354	Target Neighborhood Hits	327	Shared Neighborhood Hits	183
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

LMX1B_HUMAN
NC score	0.175351 (rank : 253)	θ value	1.81305 (rank : 223)
Query Neighborhood Hits	354	Target Neighborhood Hits	404	Shared Neighborhood Hits	189
SwissProt Accessions	O60663, O75463	Gene names	LMX1B
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

HXB2_HUMAN
NC score	0.175326 (rank : 254)	θ value	θ > 10 (rank : 396)
Query Neighborhood Hits	354	Target Neighborhood Hits	367	Shared Neighborhood Hits	196
SwissProt Accessions	P14652, P10913, P17485	Gene names	HOXB2, HOX2H
Domain Architecture
Description	Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8).

VSX1_MOUSE
NC score	0.174891 (rank : 255)	θ value	θ > 10 (rank : 507)
Query Neighborhood Hits	354	Target Neighborhood Hits	356	Shared Neighborhood Hits	190
SwissProt Accessions	Q91V10	Gene names	Vsx1, Rinx
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

LMX1B_MOUSE
NC score	0.174521 (rank : 256)	θ value	1.81305 (rank : 224)
Query Neighborhood Hits	354	Target Neighborhood Hits	394	Shared Neighborhood Hits	186
SwissProt Accessions	O88609	Gene names	Lmx1b
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

GSHI_HUMAN
NC score	0.174406 (rank : 257)	θ value	θ > 10 (rank : 376)
Query Neighborhood Hits	354	Target Neighborhood Hits	314	Shared Neighborhood Hits	192
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

VSX1_HUMAN
NC score	0.174036 (rank : 258)	θ value	θ > 10 (rank : 506)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	190
SwissProt Accessions	Q9NZR4, Q5TF40, Q5TF41, Q9HCU3, Q9NU27	Gene names	VSX1, RINX
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

HXD10_HUMAN
NC score	0.173908 (rank : 259)	θ value	θ > 10 (rank : 425)
Query Neighborhood Hits	354	Target Neighborhood Hits	392	Shared Neighborhood Hits	209
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
NC score	0.173320 (rank : 260)	θ value	θ > 10 (rank : 426)
Query Neighborhood Hits	354	Target Neighborhood Hits	392	Shared Neighborhood Hits	205
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

GBX2_HUMAN
NC score	0.173245 (rank : 261)	θ value	6.88961 (rank : 308)
Query Neighborhood Hits	354	Target Neighborhood Hits	322	Shared Neighborhood Hits	176
SwissProt Accessions	P52951, O43833, Q53RX5, Q9Y5Y1	Gene names	GBX2
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2).

GBX2_MOUSE
NC score	0.173006 (rank : 262)	θ value	6.88961 (rank : 309)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	176
SwissProt Accessions	P48031	Gene names	Gbx2, Mmoxa, Stra7
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2) (Homeobox protein STRA7).

HXC10_MOUSE
NC score	0.172656 (rank : 263)	θ value	θ > 10 (rank : 412)
Query Neighborhood Hits	354	Target Neighborhood Hits	417	Shared Neighborhood Hits	207
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXD3_MOUSE
NC score	0.171971 (rank : 264)	θ value	θ > 10 (rank : 432)
Query Neighborhood Hits	354	Target Neighborhood Hits	435	Shared Neighborhood Hits	205
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

HXC10_HUMAN
NC score	0.171639 (rank : 265)	θ value	θ > 10 (rank : 411)
Query Neighborhood Hits	354	Target Neighborhood Hits	417	Shared Neighborhood Hits	208
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HXD3_HUMAN
NC score	0.171145 (rank : 266)	θ value	θ > 10 (rank : 431)
Query Neighborhood Hits	354	Target Neighborhood Hits	433	Shared Neighborhood Hits	208
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

HXA9_MOUSE
NC score	0.171099 (rank : 267)	θ value	4.03905 (rank : 264)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	200
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXB3_HUMAN
NC score	0.171062 (rank : 268)	θ value	θ > 10 (rank : 397)
Query Neighborhood Hits	354	Target Neighborhood Hits	559	Shared Neighborhood Hits	209
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HXA9_HUMAN
NC score	0.170889 (rank : 269)	θ value	4.03905 (rank : 263)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	200
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

CHX10_HUMAN
NC score	0.170716 (rank : 270)	θ value	θ > 10 (rank : 359)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	190
SwissProt Accessions	P58304	Gene names	CHX10, VSX2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

CHX10_MOUSE
NC score	0.170133 (rank : 271)	θ value	θ > 10 (rank : 360)
Query Neighborhood Hits	354	Target Neighborhood Hits	340	Shared Neighborhood Hits	190
SwissProt Accessions	Q61412	Gene names	Chx10, Vsx2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

HXB3_MOUSE
NC score	0.169611 (rank : 272)	θ value	θ > 10 (rank : 398)
Query Neighborhood Hits	354	Target Neighborhood Hits	493	Shared Neighborhood Hits	200
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

LHX6_MOUSE
NC score	0.169152 (rank : 273)	θ value	2.36792 (rank : 236)
Query Neighborhood Hits	354	Target Neighborhood Hits	399	Shared Neighborhood Hits	187
SwissProt Accessions	O88706	Gene names	Lhx6
Domain Architecture
Description	LIM/homeobox protein Lhx6.

HXA10_HUMAN
NC score	0.168988 (rank : 274)	θ value	θ > 10 (rank : 382)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	196
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXC12_HUMAN
NC score	0.167893 (rank : 275)	θ value	θ > 10 (rank : 414)
Query Neighborhood Hits	354	Target Neighborhood Hits	313	Shared Neighborhood Hits	182
SwissProt Accessions	P31275, Q9BXJ6	Gene names	HOXC12, HOX3F
Domain Architecture
Description	Homeobox protein Hox-C12 (Hox-3F).

HXA10_MOUSE
NC score	0.167658 (rank : 276)	θ value	θ > 10 (rank : 383)
Query Neighborhood Hits	354	Target Neighborhood Hits	365	Shared Neighborhood Hits	196
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

HXC12_MOUSE
NC score	0.167574 (rank : 277)	θ value	θ > 10 (rank : 415)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	183
SwissProt Accessions	Q8K5B8	Gene names	Hoxc12, Hox-3.8, Hoxc-12
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C12 (Hox-3.8).

HXA7_MOUSE
NC score	0.166460 (rank : 278)	θ value	θ > 10 (rank : 395)
Query Neighborhood Hits	354	Target Neighborhood Hits	318	Shared Neighborhood Hits	192
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXA4_MOUSE
NC score	0.166411 (rank : 279)	θ value	θ > 10 (rank : 389)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	202
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

HXB7_MOUSE
NC score	0.166039 (rank : 280)	θ value	θ > 10 (rank : 406)
Query Neighborhood Hits	354	Target Neighborhood Hits	314	Shared Neighborhood Hits	189
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXA6_HUMAN
NC score	0.165929 (rank : 281)	θ value	θ > 10 (rank : 392)
Query Neighborhood Hits	354	Target Neighborhood Hits	309	Shared Neighborhood Hits	192
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

HXC4_HUMAN
NC score	0.165908 (rank : 282)	θ value	4.03905 (rank : 265)
Query Neighborhood Hits	354	Target Neighborhood Hits	361	Shared Neighborhood Hits	202
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXB6_MOUSE
NC score	0.165560 (rank : 283)	θ value	θ > 10 (rank : 404)
Query Neighborhood Hits	354	Target Neighborhood Hits	309	Shared Neighborhood Hits	190
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

LHX61_HUMAN
NC score	0.165489 (rank : 284)	θ value	8.99809 (rank : 334)
Query Neighborhood Hits	354	Target Neighborhood Hits	412	Shared Neighborhood Hits	193
SwissProt Accessions	Q9UPM6, Q5T7S8, Q9NTK3, Q9UPM5	Gene names	LHX6, LHX6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1 (Lhx6).

HXB6_HUMAN
NC score	0.165232 (rank : 285)	θ value	θ > 10 (rank : 403)
Query Neighborhood Hits	354	Target Neighborhood Hits	307	Shared Neighborhood Hits	190
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXC6_HUMAN
NC score	0.164972 (rank : 286)	θ value	θ > 10 (rank : 419)
Query Neighborhood Hits	354	Target Neighborhood Hits	306	Shared Neighborhood Hits	188
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
NC score	0.164972 (rank : 287)	θ value	θ > 10 (rank : 420)
Query Neighborhood Hits	354	Target Neighborhood Hits	306	Shared Neighborhood Hits	188
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

HXC4_MOUSE
NC score	0.164869 (rank : 288)	θ value	θ > 10 (rank : 416)
Query Neighborhood Hits	354	Target Neighborhood Hits	365	Shared Neighborhood Hits	201
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

LHX8_MOUSE
NC score	0.164254 (rank : 289)	θ value	θ > 10 (rank : 443)
Query Neighborhood Hits	354	Target Neighborhood Hits	406	Shared Neighborhood Hits	187
SwissProt Accessions	O35652, O70163, O88707	Gene names	Lhx8, Lhx7
Domain Architecture
Description	LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3).

HXB7_HUMAN
NC score	0.164246 (rank : 290)	θ value	θ > 10 (rank : 405)
Query Neighborhood Hits	354	Target Neighborhood Hits	311	Shared Neighborhood Hits	189
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

GBX1_HUMAN
NC score	0.164105 (rank : 291)	θ value	θ > 10 (rank : 374)
Query Neighborhood Hits	354	Target Neighborhood Hits	334	Shared Neighborhood Hits	178
SwissProt Accessions	Q14549	Gene names	GBX1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

GBX1_MOUSE
NC score	0.163880 (rank : 292)	θ value	θ > 10 (rank : 375)
Query Neighborhood Hits	354	Target Neighborhood Hits	350	Shared Neighborhood Hits	179
SwissProt Accessions	P82976, Q8CGW5	Gene names	Gbx1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

PAX6_HUMAN
NC score	0.162244 (rank : 293)	θ value	θ > 10 (rank : 457)
Query Neighborhood Hits	354	Target Neighborhood Hits	383	Shared Neighborhood Hits	199
SwissProt Accessions	P26367, Q6N006, Q99413	Gene names	PAX6, AN2
Domain Architecture
Description	Paired box protein Pax-6 (Oculorhombin) (Aniridia type II protein).

PAX6_MOUSE
NC score	0.162244 (rank : 294)	θ value	θ > 10 (rank : 458)
Query Neighborhood Hits	354	Target Neighborhood Hits	383	Shared Neighborhood Hits	199
SwissProt Accessions	P63015, P32117, P70601, Q62222, Q64037, Q8CEI5, Q8VDB5, Q921Q8	Gene names	Pax6, Pax-6, Sey
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-6 (Oculorhombin).

HXA6_MOUSE
NC score	0.162196 (rank : 295)	θ value	θ > 10 (rank : 393)
Query Neighborhood Hits	354	Target Neighborhood Hits	304	Shared Neighborhood Hits	190
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

HXB9_MOUSE
NC score	0.160845 (rank : 296)	θ value	θ > 10 (rank : 410)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	194
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HXD9_HUMAN
NC score	0.160647 (rank : 297)	θ value	θ > 10 (rank : 437)
Query Neighborhood Hits	354	Target Neighborhood Hits	352	Shared Neighborhood Hits	200
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXA7_HUMAN
NC score	0.160290 (rank : 298)	θ value	θ > 10 (rank : 394)
Query Neighborhood Hits	354	Target Neighborhood Hits	309	Shared Neighborhood Hits	190
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXC9_HUMAN
NC score	0.160280 (rank : 299)	θ value	θ > 10 (rank : 423)
Query Neighborhood Hits	354	Target Neighborhood Hits	339	Shared Neighborhood Hits	193
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
NC score	0.160240 (rank : 300)	θ value	θ > 10 (rank : 424)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	193
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXD9_MOUSE
NC score	0.159569 (rank : 301)	θ value	θ > 10 (rank : 438)
Query Neighborhood Hits	354	Target Neighborhood Hits	359	Shared Neighborhood Hits	198
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

HXB9_HUMAN
NC score	0.159568 (rank : 302)	θ value	θ > 10 (rank : 409)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	193
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HXA4_HUMAN
NC score	0.159431 (rank : 303)	θ value	θ > 10 (rank : 388)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	204
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

HXB4_HUMAN
NC score	0.159159 (rank : 304)	θ value	θ > 10 (rank : 399)
Query Neighborhood Hits	354	Target Neighborhood Hits	376	Shared Neighborhood Hits	205
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

DUX2_HUMAN
NC score	0.157532 (rank : 305)	θ value	5.27518 (rank : 284)
Query Neighborhood Hits	354	Target Neighborhood Hits	173	Shared Neighborhood Hits	106
SwissProt Accessions	O75505	Gene names	DUX2
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 2.

HXB5_HUMAN
NC score	0.157058 (rank : 306)	θ value	θ > 10 (rank : 401)
Query Neighborhood Hits	354	Target Neighborhood Hits	332	Shared Neighborhood Hits	195
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

HXB4_MOUSE
NC score	0.156786 (rank : 307)	θ value	θ > 10 (rank : 400)
Query Neighborhood Hits	354	Target Neighborhood Hits	375	Shared Neighborhood Hits	198
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

HXB5_MOUSE
NC score	0.156624 (rank : 308)	θ value	θ > 10 (rank : 402)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	194
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXD4_HUMAN
NC score	0.155278 (rank : 309)	θ value	θ > 10 (rank : 433)
Query Neighborhood Hits	354	Target Neighborhood Hits	337	Shared Neighborhood Hits	195
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

ONEC2_MOUSE
NC score	0.154441 (rank : 310)	θ value	0.21417 (rank : 134)
Query Neighborhood Hits	354	Target Neighborhood Hits	123	Shared Neighborhood Hits	78
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

ONEC2_HUMAN
NC score	0.154404 (rank : 311)	θ value	0.21417 (rank : 133)
Query Neighborhood Hits	354	Target Neighborhood Hits	115	Shared Neighborhood Hits	76
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

HXA5_HUMAN
NC score	0.153487 (rank : 312)	θ value	θ > 10 (rank : 390)
Query Neighborhood Hits	354	Target Neighborhood Hits	336	Shared Neighborhood Hits	197
SwissProt Accessions	P20719, O43367, Q96CY6	Gene names	HOXA5, HOX1C
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1C).

HXA5_MOUSE
NC score	0.153122 (rank : 313)	θ value	θ > 10 (rank : 391)
Query Neighborhood Hits	354	Target Neighborhood Hits	338	Shared Neighborhood Hits	193
SwissProt Accessions	P09021, Q91VQ5	Gene names	Hoxa5, Hox-1.3, Hoxa-5
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1.3) (M2).

HXD4_MOUSE
NC score	0.152828 (rank : 314)	θ value	θ > 10 (rank : 434)
Query Neighborhood Hits	354	Target Neighborhood Hits	339	Shared Neighborhood Hits	191
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

HXC5_HUMAN
NC score	0.152350 (rank : 315)	θ value	θ > 10 (rank : 417)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	186
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HXC5_MOUSE
NC score	0.152023 (rank : 316)	θ value	θ > 10 (rank : 418)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	185
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

HNF6_MOUSE
NC score	0.151921 (rank : 317)	θ value	0.62314 (rank : 164)
Query Neighborhood Hits	354	Target Neighborhood Hits	124	Shared Neighborhood Hits	82
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

ATBF1_HUMAN
NC score	0.151730 (rank : 318)	θ value	1.06291 (rank : 183)
Query Neighborhood Hits	354	Target Neighborhood Hits	1547	Shared Neighborhood Hits	261
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ATBF1_MOUSE
NC score	0.151288 (rank : 319)	θ value	1.06291 (rank : 184)
Query Neighborhood Hits	354	Target Neighborhood Hits	1841	Shared Neighborhood Hits	274
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

LHX61_MOUSE
NC score	0.149629 (rank : 320)	θ value	θ > 10 (rank : 442)
Query Neighborhood Hits	354	Target Neighborhood Hits	396	Shared Neighborhood Hits	185
SwissProt Accessions	Q9R1R0, Q9R1R1	Gene names	Lhx6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1.

HNF6_HUMAN
NC score	0.149554 (rank : 321)	θ value	0.62314 (rank : 163)
Query Neighborhood Hits	354	Target Neighborhood Hits	127	Shared Neighborhood Hits	81
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

PO6F2_MOUSE
NC score	0.135537 (rank : 322)	θ value	θ > 10 (rank : 488)
Query Neighborhood Hits	354	Target Neighborhood Hits	639	Shared Neighborhood Hits	223
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

CUTL1_MOUSE
NC score	0.132878 (rank : 323)	θ value	0.0252991 (rank : 64)
Query Neighborhood Hits	354	Target Neighborhood Hits	1620	Shared Neighborhood Hits	203
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

CUTL2_MOUSE
NC score	0.131799 (rank : 324)	θ value	θ > 10 (rank : 367)
Query Neighborhood Hits	354	Target Neighborhood Hits	771	Shared Neighborhood Hits	155
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_HUMAN
NC score	0.130990 (rank : 325)	θ value	θ > 10 (rank : 366)
Query Neighborhood Hits	354	Target Neighborhood Hits	906	Shared Neighborhood Hits	164
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

PO6F2_HUMAN
NC score	0.130908 (rank : 326)	θ value	θ > 10 (rank : 487)
Query Neighborhood Hits	354	Target Neighborhood Hits	618	Shared Neighborhood Hits	214
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

PO6F1_MOUSE
NC score	0.124792 (rank : 327)	θ value	θ > 10 (rank : 486)
Query Neighborhood Hits	354	Target Neighborhood Hits	581	Shared Neighborhood Hits	214
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

CUTL1_HUMAN
NC score	0.123814 (rank : 328)	θ value	0.0431538 (rank : 85)
Query Neighborhood Hits	354	Target Neighborhood Hits	1574	Shared Neighborhood Hits	194
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

PO6F1_HUMAN
NC score	0.120878 (rank : 329)	θ value	θ > 10 (rank : 485)
Query Neighborhood Hits	354	Target Neighborhood Hits	370	Shared Neighborhood Hits	199
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

HOP_MOUSE
NC score	0.114803 (rank : 330)	θ value	1.38821 (rank : 206)
Query Neighborhood Hits	354	Target Neighborhood Hits	102	Shared Neighborhood Hits	64
SwissProt Accessions	Q8R1H0, Q8C1N5, Q8CJ22	Gene names	Hop, Hod, Ob1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Homeobox-only protein) (Odd homeobox protein 1) (mOB1).

SON_HUMAN
NC score	0.113734 (rank : 331)	θ value	2.79066e-09 (rank : 13)
Query Neighborhood Hits	354	Target Neighborhood Hits	1568	Shared Neighborhood Hits	105
SwissProt Accessions	P18583, O14487, O95981, Q14120, Q9H7B1, Q9P070, Q9P072, Q9UKP9, Q9UPY0	Gene names	SON, C21orf50, DBP5, KIAA1019, NREBP
Domain Architecture
Description	SON protein (SON3) (Negative regulatory element-binding protein) (NRE- binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1).

GSCR1_HUMAN
NC score	0.111207 (rank : 332)	θ value	0.0193708 (rank : 60)
Query Neighborhood Hits	354	Target Neighborhood Hits	674	Shared Neighborhood Hits	73
SwissProt Accessions	Q9NZM4	Gene names	GLTSCR1
Domain Architecture	No domain graphic available
Description	Glioma tumor suppressor candidate region gene 1 protein.

NACAM_MOUSE
NC score	0.108294 (rank : 333)	θ value	2.88788e-06 (rank : 14)
Query Neighborhood Hits	354	Target Neighborhood Hits	1866	Shared Neighborhood Hits	117
SwissProt Accessions	P70670	Gene names	Naca
Domain Architecture	No domain graphic available
Description	Nascent polypeptide-associated complex subunit alpha, muscle-specific form (Alpha-NAC, muscle-specific form).

PO2F1_HUMAN
NC score	0.108291 (rank : 334)	θ value	4.03905 (rank : 273)
Query Neighborhood Hits	354	Target Neighborhood Hits	426	Shared Neighborhood Hits	211
SwissProt Accessions	P14859, Q5TBT7, Q6PK46, Q8NEU9, Q9BPV1	Gene names	POU2F1, OCT1, OTF1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

HMBX1_HUMAN
NC score	0.106414 (rank : 335)	θ value	θ > 10 (rank : 378)
Query Neighborhood Hits	354	Target Neighborhood Hits	118	Shared Neighborhood Hits	79
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

PO5F1_HUMAN
NC score	0.105615 (rank : 336)	θ value	8.99809 (rank : 348)
Query Neighborhood Hits	354	Target Neighborhood Hits	321	Shared Neighborhood Hits	176
SwissProt Accessions	Q01860, P31359, Q15167, Q15168, Q16422	Gene names	POU5F1, OCT3, OCT4, OTF3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4).

PO2F3_MOUSE
NC score	0.103696 (rank : 337)	θ value	θ > 10 (rank : 467)
Query Neighborhood Hits	354	Target Neighborhood Hits	328	Shared Neighborhood Hits	182
SwissProt Accessions	P31362	Gene names	Pou2f3, Epoc1, Oct11, Otf-11, Otf11
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1).

PO2F3_HUMAN
NC score	0.101863 (rank : 338)	θ value	θ > 10 (rank : 466)
Query Neighborhood Hits	354	Target Neighborhood Hits	319	Shared Neighborhood Hits	177
SwissProt Accessions	Q9UKI9, Q9UKR7, Q9Y504	Gene names	POU2F3, OTF11, PLA1
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein).

PIT1_MOUSE
NC score	0.101748 (rank : 339)	θ value	θ > 10 (rank : 464)
Query Neighborhood Hits	354	Target Neighborhood Hits	313	Shared Neighborhood Hits	184
SwissProt Accessions	Q00286	Gene names	Pou1f1, Pit-1, Pit1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PIT1_HUMAN
NC score	0.099518 (rank : 340)	θ value	θ > 10 (rank : 463)
Query Neighborhood Hits	354	Target Neighborhood Hits	292	Shared Neighborhood Hits	174
SwissProt Accessions	P28069, O75757, Q15132, Q15133, Q9UEL3	Gene names	POU1F1, GHF1, PIT1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PO2F1_MOUSE
NC score	0.099478 (rank : 341)	θ value	8.99809 (rank : 347)
Query Neighborhood Hits	354	Target Neighborhood Hits	408	Shared Neighborhood Hits	196
SwissProt Accessions	P25425, Q61994, Q63891, Q6Y681, Q7TSD0, Q8BT04, Q8K570, Q99JH0, Q9WTZ4, Q9WTZ5, Q9WTZ6	Gene names	Pou2f1, Oct-1, Otf-1, Otf1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

PO2F2_MOUSE
NC score	0.099272 (rank : 342)	θ value	1.06291 (rank : 195)
Query Neighborhood Hits	354	Target Neighborhood Hits	353	Shared Neighborhood Hits	185
SwissProt Accessions	Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q61995, Q61996, Q64245	Gene names	Pou2f2, Oct2, Otf2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PO2F2_HUMAN
NC score	0.097012 (rank : 343)	θ value	3.0926 (rank : 256)
Query Neighborhood Hits	354	Target Neighborhood Hits	379	Shared Neighborhood Hits	189
SwissProt Accessions	P09086, Q16648, Q9BRS4	Gene names	POU2F2, OCT2, OTF2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PO5F1_MOUSE
NC score	0.090255 (rank : 344)	θ value	θ > 10 (rank : 482)
Query Neighborhood Hits	354	Target Neighborhood Hits	305	Shared Neighborhood Hits	163
SwissProt Accessions	P20263, Q63843	Gene names	Pou5f1, Oct-3, Oct-4, Otf-3, Otf3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3).

HMBX1_MOUSE
NC score	0.089879 (rank : 345)	θ value	θ > 10 (rank : 379)
Query Neighborhood Hits	354	Target Neighborhood Hits	117	Shared Neighborhood Hits	73
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

TAF4_HUMAN
NC score	0.089042 (rank : 346)	θ value	0.0563607 (rank : 108)
Query Neighborhood Hits	354	Target Neighborhood Hits	687	Shared Neighborhood Hits	65
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

SON_MOUSE
NC score	0.088819 (rank : 347)	θ value	1.38821 (rank : 214)
Query Neighborhood Hits	354	Target Neighborhood Hits	957	Shared Neighborhood Hits	74
SwissProt Accessions	Q9QX47, Q9CQ12, Q9CQK6, Q9QXP5	Gene names	Son
Domain Architecture
Description	SON protein.

K1683_HUMAN
NC score	0.087341 (rank : 348)	θ value	0.00509761 (rank : 41)
Query Neighborhood Hits	354	Target Neighborhood Hits	240	Shared Neighborhood Hits	33
SwissProt Accessions	Q9H0B3, Q8N4G8, Q96M14, Q9C0I0	Gene names	KIAA1683
Domain Architecture	No domain graphic available
Description	Protein KIAA1683.

PRAX_HUMAN
NC score	0.083688 (rank : 349)	θ value	0.0736092 (rank : 118)
Query Neighborhood Hits	354	Target Neighborhood Hits	215	Shared Neighborhood Hits	28
SwissProt Accessions	Q9BXM0, Q9BXL9, Q9HCF2	Gene names	PRX, KIAA1620
Domain Architecture
Description	Periaxin.

PO3F3_HUMAN
NC score	0.082809 (rank : 350)	θ value	θ > 10 (rank : 472)
Query Neighborhood Hits	354	Target Neighborhood Hits	311	Shared Neighborhood Hits	175
SwissProt Accessions	P20264, P78379	Gene names	POU3F3, BRN1, OTF8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F3_MOUSE
NC score	0.082685 (rank : 351)	θ value	θ > 10 (rank : 473)
Query Neighborhood Hits	354	Target Neighborhood Hits	308	Shared Neighborhood Hits	174
SwissProt Accessions	P31361	Gene names	Pou3f3, Brn-1, Brn1, Otf8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

K0431_HUMAN
NC score	0.081532 (rank : 352)	θ value	0.0148317 (rank : 58)
Query Neighborhood Hits	354	Target Neighborhood Hits	211	Shared Neighborhood Hits	5
SwissProt Accessions	O43313	Gene names	KIAA0431
Domain Architecture	No domain graphic available
Description	Protein KIAA0431.

PO4F1_MOUSE
NC score	0.079688 (rank : 353)	θ value	θ > 10 (rank : 477)
Query Neighborhood Hits	354	Target Neighborhood Hits	345	Shared Neighborhood Hits	176
SwissProt Accessions	P17208	Gene names	Pou4f1, Brn-3, Brn3, Brn3a
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0).

PO4F1_HUMAN
NC score	0.078686 (rank : 354)	θ value	θ > 10 (rank : 476)
Query Neighborhood Hits	354	Target Neighborhood Hits	342	Shared Neighborhood Hits	176
SwissProt Accessions	Q01851, Q14986, Q15318	Gene names	POU4F1, BRN3A, RDC1
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1).

LASS4_MOUSE
NC score	0.077120 (rank : 355)	θ value	θ > 10 (rank : 441)
Query Neighborhood Hits	354	Target Neighborhood Hits	38	Shared Neighborhood Hits	23
SwissProt Accessions	Q9D6J1, Q8BZA6, Q8C151, Q9CX09	Gene names	Lass4, Trh1
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 4 (Translocating chain-associating membrane protein homolog 1) (TRAM homolog 1).

PO3F2_HUMAN
NC score	0.076616 (rank : 356)	θ value	θ > 10 (rank : 470)
Query Neighborhood Hits	354	Target Neighborhood Hits	308	Shared Neighborhood Hits	169
SwissProt Accessions	P20265, Q14960, Q86V54, Q9UJL0	Gene names	POU3F2, BRN2, OCT7, OTF7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F2_MOUSE
NC score	0.076611 (rank : 357)	θ value	θ > 10 (rank : 471)
Query Neighborhood Hits	354	Target Neighborhood Hits	313	Shared Neighborhood Hits	169
SwissProt Accessions	P31360	Gene names	Pou3f2, Brn-2, Brn2, Otf7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PRG4_HUMAN
NC score	0.075837 (rank : 358)	θ value	0.21417 (rank : 135)
Query Neighborhood Hits	354	Target Neighborhood Hits	764	Shared Neighborhood Hits	60
SwissProt Accessions	Q92954, Q6DNC4, Q6DNC5, Q6ZMZ5, Q9BX49	Gene names	PRG4, MSF, SZP
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

MUC1_HUMAN
NC score	0.075298 (rank : 359)	θ value	0.0563607 (rank : 105)
Query Neighborhood Hits	354	Target Neighborhood Hits	975	Shared Neighborhood Hits	89
SwissProt Accessions	P15941, P13931, P15942, P17626, Q14128, Q14876, Q16437, Q16442, Q16615, Q9BXA4, Q9UE75, Q9UE76, Q9UQL1, Q9Y4J2	Gene names	MUC1
Domain Architecture
Description	Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut- reactive urinary mucin) (PUM) (Breast carcinoma-associated antigen DF3) (CD227 antigen).

PO4F2_HUMAN
NC score	0.073399 (rank : 360)	θ value	θ > 10 (rank : 478)
Query Neighborhood Hits	354	Target Neighborhood Hits	310	Shared Neighborhood Hits	167
SwissProt Accessions	Q12837, Q13883, Q14987	Gene names	POU4F2, BRN3B
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B).

PO4F3_HUMAN
NC score	0.072713 (rank : 361)	θ value	θ > 10 (rank : 480)
Query Neighborhood Hits	354	Target Neighborhood Hits	307	Shared Neighborhood Hits	165
SwissProt Accessions	Q15319, O60557	Gene names	POU4F3, BRN3C
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F3_MOUSE
NC score	0.072711 (rank : 362)	θ value	θ > 10 (rank : 481)
Query Neighborhood Hits	354	Target Neighborhood Hits	311	Shared Neighborhood Hits	165
SwissProt Accessions	Q63955	Gene names	Pou4f3, Brn-3c, Brn3c
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F2_MOUSE
NC score	0.072587 (rank : 363)	θ value	θ > 10 (rank : 479)
Query Neighborhood Hits	354	Target Neighborhood Hits	312	Shared Neighborhood Hits	167
SwissProt Accessions	Q63934, Q63954	Gene names	Pou4f2, Brn3b
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2).

TSH3_MOUSE
NC score	0.072485 (rank : 364)	θ value	0.365318 (rank : 155)
Query Neighborhood Hits	354	Target Neighborhood Hits	590	Shared Neighborhood Hits	31
SwissProt Accessions	Q8CGV9, Q5DTX4	Gene names	Tshz3, Kiaa1474, Tsh3, Zfp537, Znf537
Domain Architecture	No domain graphic available
Description	Teashirt homolog 3 (Zinc finger protein 537).

TSH2_MOUSE
NC score	0.072038 (rank : 365)	θ value	0.279714 (rank : 145)
Query Neighborhood Hits	354	Target Neighborhood Hits	467	Shared Neighborhood Hits	22
SwissProt Accessions	Q68FE9, Q5DTF1, Q6AXH5, Q9JL71	Gene names	Tshz2, Kiaa4248, Sdccag33l, Tsh2, Zfp218, Znf218
Domain Architecture	No domain graphic available
Description	Teashirt homolog 2 (Zinc finger protein 218) (SDCCAG33-like protein).

TSH2_HUMAN
NC score	0.071688 (rank : 366)	θ value	0.279714 (rank : 144)
Query Neighborhood Hits	354	Target Neighborhood Hits	479	Shared Neighborhood Hits	22
SwissProt Accessions	Q9NRE2, Q4VXM4, Q6N003, Q8N260	Gene names	TSHZ2, C20orf17, TSH2, ZNF218
Domain Architecture	No domain graphic available
Description	Teashirt homolog 2 (Zinc finger protein 218) (Ovarian cancer-related protein 10-2) (OVC10-2).

MUC2_HUMAN
NC score	0.071077 (rank : 367)	θ value	0.0563607 (rank : 106)
Query Neighborhood Hits	354	Target Neighborhood Hits	906	Shared Neighborhood Hits	78
SwissProt Accessions	Q02817, Q14878	Gene names	MUC2, SMUC
Domain Architecture
Description	Mucin-2 precursor (Intestinal mucin-2).

TSH3_HUMAN
NC score	0.071074 (rank : 368)	θ value	0.365318 (rank : 154)
Query Neighborhood Hits	354	Target Neighborhood Hits	564	Shared Neighborhood Hits	29
SwissProt Accessions	Q63HK5, Q9H0G6, Q9P254	Gene names	TSHZ3, KIAA1474, TSH3, ZNF537
Domain Architecture	No domain graphic available
Description	Teashirt homolog 3 (Zinc finger protein 537).

HCFC1_HUMAN
NC score	0.070922 (rank : 369)	θ value	0.0736092 (rank : 113)
Query Neighborhood Hits	354	Target Neighborhood Hits	331	Shared Neighborhood Hits	41
SwissProt Accessions	P51610, Q6P4G5	Gene names	HCFC1, HCF1
Domain Architecture	No domain graphic available
Description	Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory protein) (VCAF) (CFF) [Contains: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF C-terminal chain 1; HCF C- terminal chain 2; HCF C-terminal chain 3; HCF C-terminal chain 4; HCF C-terminal chain 5; HCF C-terminal chain 6].

HOP_HUMAN
NC score	0.070705 (rank : 370)	θ value	θ > 10 (rank : 381)
Query Neighborhood Hits	354	Target Neighborhood Hits	107	Shared Neighborhood Hits	67
SwissProt Accessions	Q9BPY8, Q8N0V6, Q96CI1	Gene names	HOP, HOD, LAGY, NECC1, OB1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1).

CO002_HUMAN
NC score	0.070076 (rank : 371)	θ value	2.36792 (rank : 229)
Query Neighborhood Hits	354	Target Neighborhood Hits	387	Shared Neighborhood Hits	49
SwissProt Accessions	Q9NZP6	Gene names	C15orf2
Domain Architecture	No domain graphic available
Description	Protein C15orf2.

TSH1_MOUSE
NC score	0.069855 (rank : 372)	θ value	0.813845 (rank : 182)
Query Neighborhood Hits	354	Target Neighborhood Hits	675	Shared Neighborhood Hits	30
SwissProt Accessions	Q5DTH5, Q6PE60, Q8VD19, Q9JLD5	Gene names	Tshz1, Kiaa4206, Sdccag33, Tsh1
Domain Architecture	No domain graphic available
Description	Teashirt homolog 1 (Serologically defined colon cancer antigen 3 homolog).

ZN207_HUMAN
NC score	0.069586 (rank : 373)	θ value	1.06291 (rank : 197)
Query Neighborhood Hits	354	Target Neighborhood Hits	326	Shared Neighborhood Hits	36
SwissProt Accessions	O43670, Q96HW5, Q9BUQ7	Gene names	ZNF207
Domain Architecture	No domain graphic available
Description	Zinc finger protein 207.

HOMEZ_HUMAN
NC score	0.068149 (rank : 374)	θ value	θ > 10 (rank : 380)
Query Neighborhood Hits	354	Target Neighborhood Hits	110	Shared Neighborhood Hits	42
SwissProt Accessions	Q8IX15, Q6P049, Q86XB6, Q9P2A5	Gene names	HOMEZ, KIAA1443
Domain Architecture
Description	Homeobox and leucine zipper protein Homez (Homeodomain leucine zipper- containing factor).

MDC1_HUMAN
NC score	0.067184 (rank : 375)	θ value	0.279714 (rank : 142)
Query Neighborhood Hits	354	Target Neighborhood Hits	1446	Shared Neighborhood Hits	87
SwissProt Accessions	Q14676, Q5JP55, Q5JP56, Q5ST83, Q68CQ3, Q86Z06, Q96QC2	Gene names	MDC1, KIAA0170, NFBD1
Domain Architecture	No domain graphic available
Description	Mediator of DNA damage checkpoint protein 1 (Nuclear factor with BRCT domains 1).

MUC7_HUMAN
NC score	0.066859 (rank : 376)	θ value	θ > 10 (rank : 453)
Query Neighborhood Hits	354	Target Neighborhood Hits	538	Shared Neighborhood Hits	56
SwissProt Accessions	Q8TAX7	Gene names	MUC7, MG2
Domain Architecture	No domain graphic available
Description	Mucin-7 precursor (MUC-7) (Salivary mucin-7) (Apo-MG2).

HCFC1_MOUSE
NC score	0.066746 (rank : 377)	θ value	0.0736092 (rank : 114)
Query Neighborhood Hits	354	Target Neighborhood Hits	348	Shared Neighborhood Hits	40
SwissProt Accessions	Q61191, Q684R1, Q7TSB0, Q8C2D0, Q9QWH2	Gene names	Hcfc1
Domain Architecture	No domain graphic available
Description	Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N- terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF C-terminal chain 1; HCF C-terminal chain 2; HCF C-terminal chain 3; HCF C-terminal chain 4; HCF C-terminal chain 5; HCF C-terminal chain 6].

CK024_HUMAN
NC score	0.066459 (rank : 378)	θ value	θ > 10 (rank : 362)
Query Neighborhood Hits	354	Target Neighborhood Hits	408	Shared Neighborhood Hits	53
SwissProt Accessions	Q96F05, Q9H2K4	Gene names	C11orf24
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C11orf24 precursor (Protein DM4E3).

TSH1_HUMAN
NC score	0.065903 (rank : 379)	θ value	0.813845 (rank : 181)
Query Neighborhood Hits	354	Target Neighborhood Hits	558	Shared Neighborhood Hits	24
SwissProt Accessions	Q6ZSZ6, O60534, Q4LE29, Q53EU4	Gene names	TSHZ1, SDCCAG33, TSH1
Domain Architecture	No domain graphic available
Description	Teashirt homolog 1 (Serologically defined colon cancer antigen 3) (Antigen NY-CO-33).

CRTC1_MOUSE
NC score	0.065871 (rank : 380)	θ value	0.21417 (rank : 131)
Query Neighborhood Hits	354	Target Neighborhood Hits	230	Shared Neighborhood Hits	38
SwissProt Accessions	Q68ED7, Q6ZQ85	Gene names	Crtc1, Kiaa0616, Mect1
Domain Architecture	No domain graphic available
Description	CREB-regulated transcription coactivator 1 (Mucoepidermoid carcinoma translocated protein 1 homolog).

MAGE1_HUMAN
NC score	0.065698 (rank : 381)	θ value	0.0252991 (rank : 65)
Query Neighborhood Hits	354	Target Neighborhood Hits	1389	Shared Neighborhood Hits	104
SwissProt Accessions	Q9HCI5, Q86TG0, Q8TD92, Q9H216	Gene names	MAGEE1, HCA1, KIAA1587
Domain Architecture	No domain graphic available
Description	Melanoma-associated antigen E1 (MAGE-E1 antigen) (Hepatocellular carcinoma-associated protein 1).

PO3F4_MOUSE
NC score	0.064947 (rank : 382)	θ value	θ > 10 (rank : 475)
Query Neighborhood Hits	354	Target Neighborhood Hits	281	Shared Neighborhood Hits	153
SwissProt Accessions	P62515, P25216	Gene names	Pou3f4, Brn-4, Brn4, Otf9
Domain Architecture	No domain graphic available
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

PI5PA_HUMAN
NC score	0.064844 (rank : 383)	θ value	0.0563607 (rank : 107)
Query Neighborhood Hits	354	Target Neighborhood Hits	749	Shared Neighborhood Hits	82
SwissProt Accessions	Q15735, Q32M61, Q6ZTH6, Q8N902, Q9UDT9	Gene names	PIB5PA, PIPP
Domain Architecture
Description	Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC 3.1.3.56).

PO3F4_HUMAN
NC score	0.064247 (rank : 384)	θ value	θ > 10 (rank : 474)
Query Neighborhood Hits	354	Target Neighborhood Hits	297	Shared Neighborhood Hits	156
SwissProt Accessions	P49335, Q5H9G9, Q99410	Gene names	POU3F4, BRN4, OTF9
Domain Architecture
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

LMO4_HUMAN
NC score	0.062640 (rank : 385)	θ value	θ > 10 (rank : 446)
Query Neighborhood Hits	354	Target Neighborhood Hits	111	Shared Neighborhood Hits	22
SwissProt Accessions	P61968, O00158, O88894	Gene names	LMO4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LMO4_MOUSE
NC score	0.062640 (rank : 386)	θ value	θ > 10 (rank : 447)
Query Neighborhood Hits	354	Target Neighborhood Hits	111	Shared Neighborhood Hits	22
SwissProt Accessions	P61969, O00158, O88894	Gene names	Lmo4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LMO3_HUMAN
NC score	0.061280 (rank : 387)	θ value	θ > 10 (rank : 444)
Query Neighborhood Hits	354	Target Neighborhood Hits	111	Shared Neighborhood Hits	22
SwissProt Accessions	Q8TAP4, Q8N974, Q9UDD5	Gene names	LMO3, RBTN3, RHOM3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1) (Rhombotin-3).

LMO3_MOUSE
NC score	0.061280 (rank : 388)	θ value	θ > 10 (rank : 445)
Query Neighborhood Hits	354	Target Neighborhood Hits	111	Shared Neighborhood Hits	22
SwissProt Accessions	Q8BZL8	Gene names	Lmo3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1).

RBTN1_HUMAN
NC score	0.061025 (rank : 389)	θ value	θ > 10 (rank : 491)
Query Neighborhood Hits	354	Target Neighborhood Hits	110	Shared Neighborhood Hits	22
SwissProt Accessions	P25800, Q4VBC5	Gene names	LMO1, RBTN1, RHOM1, TTG1
Domain Architecture
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (T-cell translocation protein 1) (LIM-only protein 1).

RBTN1_MOUSE
NC score	0.061000 (rank : 390)	θ value	θ > 10 (rank : 492)
Query Neighborhood Hits	354	Target Neighborhood Hits	109	Shared Neighborhood Hits	22
SwissProt Accessions	Q924W9	Gene names	Lmo1, Rbtn1, Rhom1, Ttg1
Domain Architecture	No domain graphic available
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (LIM-only protein 1).

PRAX_MOUSE
NC score	0.060696 (rank : 391)	θ value	5.27518 (rank : 297)
Query Neighborhood Hits	354	Target Neighborhood Hits	199	Shared Neighborhood Hits	25
SwissProt Accessions	O55103, O55104	Gene names	Prx
Domain Architecture
Description	Periaxin.

CRTC1_HUMAN
NC score	0.060272 (rank : 392)	θ value	1.38821 (rank : 201)
Query Neighborhood Hits	354	Target Neighborhood Hits	319	Shared Neighborhood Hits	41
SwissProt Accessions	Q6UUV9, O75114, Q6Y3A3, Q7LDZ2, Q8IUL3, Q8IZ34, Q8IZL1, Q8N6W3, Q96AI8, Q9H801	Gene names	CRTC1, KIAA0616, MECT1, TORC1, WAMTP1
Domain Architecture	No domain graphic available
Description	CREB-regulated transcription coactivator 1 (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) (Mucoepidermoid carcinoma translocated protein 1).

CK024_MOUSE
NC score	0.060079 (rank : 393)	θ value	0.47712 (rank : 156)
Query Neighborhood Hits	354	Target Neighborhood Hits	307	Shared Neighborhood Hits	46
SwissProt Accessions	Q9D8N1, Q8VCP2	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C11orf24 homolog precursor.

MBD6_HUMAN
NC score	0.059921 (rank : 394)	θ value	θ > 10 (rank : 449)
Query Neighborhood Hits	354	Target Neighborhood Hits	349	Shared Neighborhood Hits	48
SwissProt Accessions	Q96DN6, Q8N3M0, Q8NA81, Q96Q00	Gene names	MBD6, KIAA1887
Domain Architecture	No domain graphic available
Description	Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding protein MBD6).

PO3F1_MOUSE
NC score	0.059736 (rank : 395)	θ value	θ > 10 (rank : 469)
Query Neighborhood Hits	354	Target Neighborhood Hits	261	Shared Neighborhood Hits	149
SwissProt Accessions	P21952	Gene names	Pou3f1, Oct6, Otf-6, Otf6, Scip
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

YETS2_MOUSE
NC score	0.059566 (rank : 396)	θ value	0.0330416 (rank : 80)
Query Neighborhood Hits	354	Target Neighborhood Hits	278	Shared Neighborhood Hits	35
SwissProt Accessions	Q3TUF7, Q6PGF8, Q80TI2, Q8CG86	Gene names	Yeats2, Kiaa1197
Domain Architecture	No domain graphic available
Description	YEATS domain-containing protein 2.

RBTN2_MOUSE
NC score	0.059104 (rank : 397)	θ value	θ > 10 (rank : 494)
Query Neighborhood Hits	354	Target Neighborhood Hits	114	Shared Neighborhood Hits	22
SwissProt Accessions	P25801	Gene names	Lmo2, Rbtn-2, Rbtn2, Rhom-2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RBTN2_HUMAN
NC score	0.059102 (rank : 398)	θ value	θ > 10 (rank : 493)
Query Neighborhood Hits	354	Target Neighborhood Hits	114	Shared Neighborhood Hits	22
SwissProt Accessions	P25791, Q9HD58	Gene names	LMO2, RBTN2, RHOM2, TTG2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

MDC1_MOUSE
NC score	0.059053 (rank : 399)	θ value	3.0926 (rank : 252)
Query Neighborhood Hits	354	Target Neighborhood Hits	998	Shared Neighborhood Hits	73
SwissProt Accessions	Q5PSV9, Q5U4D3, Q6ZQH7	Gene names	Mdc1, Kiaa0170
Domain Architecture	No domain graphic available
Description	Mediator of DNA damage checkpoint protein 1.

TPO_MOUSE
NC score	0.058843 (rank : 400)	θ value	1.81305 (rank : 227)
Query Neighborhood Hits	354	Target Neighborhood Hits	258	Shared Neighborhood Hits	27
SwissProt Accessions	P40226	Gene names	Thpo
Domain Architecture
Description	Thrombopoietin precursor (Megakaryocyte colony-stimulating factor) (Myeloproliferative leukemia virus oncogene ligand) (C-mpl ligand) (ML) (Megakaryocyte growth and development factor) (MGDF).

PO3F1_HUMAN
NC score	0.058739 (rank : 401)	θ value	θ > 10 (rank : 468)
Query Neighborhood Hits	354	Target Neighborhood Hits	256	Shared Neighborhood Hits	148
SwissProt Accessions	Q03052	Gene names	POU3F1, OCT6, OTF6
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

NFRKB_MOUSE
NC score	0.057441 (rank : 402)	θ value	θ > 10 (rank : 454)
Query Neighborhood Hits	354	Target Neighborhood Hits	393	Shared Neighborhood Hits	54
SwissProt Accessions	Q6PIJ4, Q8BWV5, Q8K0X6	Gene names	Nfrkb
Domain Architecture	No domain graphic available
Description	Nuclear factor related to kappa-B-binding protein (DNA-binding protein R kappa-B).

DOT1L_HUMAN
NC score	0.056769 (rank : 403)	θ value	1.06291 (rank : 188)
Query Neighborhood Hits	354	Target Neighborhood Hits	660	Shared Neighborhood Hits	66
SwissProt Accessions	Q8TEK3, O60379, Q96JL1	Gene names	DOT1L, KIAA1814
Domain Architecture	No domain graphic available
Description	Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein).

CN155_HUMAN
NC score	0.055669 (rank : 404)	θ value	4.03905 (rank : 260)
Query Neighborhood Hits	354	Target Neighborhood Hits	385	Shared Neighborhood Hits	34
SwissProt Accessions	Q5H9T9, Q5H9U7, Q86YI2, Q9H0J3	Gene names	C14orf155
Domain Architecture	No domain graphic available
Description	Protein C14orf155.

GON4L_MOUSE
NC score	0.055435 (rank : 405)	θ value	0.00228821 (rank : 35)
Query Neighborhood Hits	354	Target Neighborhood Hits	455	Shared Neighborhood Hits	39
SwissProt Accessions	Q9DB00, Q80TB4, Q91YI9	Gene names	Gon4l, Gon4, KIAA1606
Domain Architecture	No domain graphic available
Description	GON-4-like protein (GON-4 homolog).

OBF1_HUMAN
NC score	0.055320 (rank : 406)	θ value	1.06291 (rank : 194)
Query Neighborhood Hits	354	Target Neighborhood Hits	203	Shared Neighborhood Hits	30
SwissProt Accessions	Q16633, Q14983	Gene names	POU2AF1, OBF1
Domain Architecture	No domain graphic available
Description	POU domain class 2-associating factor 1 (B-cell-specific coactivator OBF-1) (OCT-binding factor 1) (BOB-1) (OCA-B).

CIC_HUMAN
NC score	0.055201 (rank : 407)	θ value	θ > 10 (rank : 361)
Query Neighborhood Hits	354	Target Neighborhood Hits	992	Shared Neighborhood Hits	88
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

LASS2_HUMAN
NC score	0.054457 (rank : 408)	θ value	6.88961 (rank : 313)
Query Neighborhood Hits	354	Target Neighborhood Hits	47	Shared Neighborhood Hits	33
SwissProt Accessions	Q96G23, Q9HD96, Q9NW79	Gene names	LASS2, TMSG1
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 2 (Tumor metastasis-suppressor gene 1 protein) (SP260).

CN032_MOUSE
NC score	0.053847 (rank : 409)	θ value	3.0926 (rank : 244)
Query Neighborhood Hits	354	Target Neighborhood Hits	233	Shared Neighborhood Hits	36
SwissProt Accessions	Q8BH93, Q3TF12, Q3TGL0, Q8CC90	Gene names
Domain Architecture	No domain graphic available
Description	Protein C14orf32 homolog.

PO5FL_HUMAN
NC score	0.052653 (rank : 410)	θ value	θ > 10 (rank : 483)
Query Neighborhood Hits	354	Target Neighborhood Hits	214	Shared Neighborhood Hits	122
SwissProt Accessions	Q06416, Q9BZV9	Gene names	POU5F1P1, OTF3C, POU5FLC8
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 1 (Octamer- binding protein 3-like).

PO5FM_HUMAN
NC score	0.052395 (rank : 411)	θ value	θ > 10 (rank : 484)
Query Neighborhood Hits	354	Target Neighborhood Hits	212	Shared Neighborhood Hits	124
SwissProt Accessions	Q9BZV7	Gene names	POU5F1P1, POU5FLC20
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 2.

PRG4_MOUSE
NC score	0.051870 (rank : 412)	θ value	θ > 10 (rank : 489)
Query Neighborhood Hits	354	Target Neighborhood Hits	624	Shared Neighborhood Hits	42
SwissProt Accessions	Q9JM99, Q3UEL1, Q3V198	Gene names	Prg4, Msf, Szp
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

PCLO_MOUSE
NC score	0.051747 (rank : 413)	θ value	1.81305 (rank : 226)
Query Neighborhood Hits	354	Target Neighborhood Hits	2275	Shared Neighborhood Hits	115
SwissProt Accessions	Q9QYX7, Q8CF91, Q8CF92, Q9QYX6, Q9QZJ0	Gene names	Pclo, Acz
Domain Architecture
Description	Protein piccolo (Aczonin) (Multidomain presynaptic cytomatrix protein) (Brain-derived HLMN protein).

PO121_HUMAN
NC score	0.051430 (rank : 414)	θ value	θ > 10 (rank : 465)
Query Neighborhood Hits	354	Target Neighborhood Hits	344	Shared Neighborhood Hits	46
SwissProt Accessions	Q9Y2N3, O75115, Q9Y4S7	Gene names	POM121, KIAA0618, NUP121
Domain Architecture	No domain graphic available
Description	Nuclear envelope pore membrane protein POM 121 (Pore membrane protein of 121 kDa) (P145).

OGFR_HUMAN
NC score	0.051163 (rank : 415)	θ value	5.27518 (rank : 293)
Query Neighborhood Hits	354	Target Neighborhood Hits	1582	Shared Neighborhood Hits	111
SwissProt Accessions	Q9NZT2, O96029, Q4VXW5, Q96CM2, Q9BQW1, Q9H4H0, Q9H7J5, Q9NZT3, Q9NZT4	Gene names	OGFR
Domain Architecture
Description	Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) (7-60 protein).

LPP_HUMAN
NC score	0.050035 (rank : 416)	θ value	θ > 10 (rank : 448)
Query Neighborhood Hits	354	Target Neighborhood Hits	775	Shared Neighborhood Hits	85
SwissProt Accessions	Q93052, Q8NFX5	Gene names	LPP
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma).

CS016_HUMAN
NC score	0.050034 (rank : 417)	θ value	θ > 10 (rank : 365)
Query Neighborhood Hits	354	Target Neighborhood Hits	310	Shared Neighborhood Hits	42
SwissProt Accessions	Q8ND99	Gene names	C19orf16
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C19orf16.

PRR12_HUMAN
NC score	0.050034 (rank : 418)	θ value	θ > 10 (rank : 490)
Query Neighborhood Hits	354	Target Neighborhood Hits	460	Shared Neighborhood Hits	44
SwissProt Accessions	Q9ULL5, Q8N4J6	Gene names	PRR12, KIAA1205
Domain Architecture	No domain graphic available
Description	Proline-rich protein 12.

SRRM2_MOUSE
NC score	0.047502 (rank : 419)	θ value	5.27518 (rank : 299)
Query Neighborhood Hits	354	Target Neighborhood Hits	1470	Shared Neighborhood Hits	79
SwissProt Accessions	Q8BTI8, Q3TBY5, Q569P9, Q80U37, Q8K383	Gene names	Srrm2, Kiaa0324
Domain Architecture	No domain graphic available
Description	Serine/arginine repetitive matrix protein 2.

GRIN1_HUMAN
NC score	0.046805 (rank : 420)	θ value	6.88961 (rank : 310)
Query Neighborhood Hits	354	Target Neighborhood Hits	681	Shared Neighborhood Hits	59
SwissProt Accessions	Q7Z2K8, Q8ND74, Q96PZ4	Gene names	GPRIN1, KIAA1893
Domain Architecture	No domain graphic available
Description	G protein-regulated inducer of neurite outgrowth 1 (GRIN1).

K1802_MOUSE
NC score	0.046738 (rank : 421)	θ value	0.00665767 (rank : 42)
Query Neighborhood Hits	354	Target Neighborhood Hits	1596	Shared Neighborhood Hits	83
SwissProt Accessions	Q8K327, Q3UZ85, Q6ZPI1	Gene names	Kiaa1802, D8Ertd457e
Domain Architecture	No domain graphic available
Description	Zinc finger protein KIAA1802.

U689_HUMAN
NC score	0.046419 (rank : 422)	θ value	0.21417 (rank : 137)
Query Neighborhood Hits	354	Target Neighborhood Hits	26	Shared Neighborhood Hits	6
SwissProt Accessions	Q6UX39	Gene names	ames=UNQ689/PRO1329
Domain Architecture	No domain graphic available
Description	Protein UNQ689/PRO1329 precursor.

K0240_MOUSE
NC score	0.046379 (rank : 423)	θ value	1.81305 (rank : 222)
Query Neighborhood Hits	354	Target Neighborhood Hits	211	Shared Neighborhood Hits	26
SwissProt Accessions	Q8CHH5	Gene names	Kiaa0240
Domain Architecture	No domain graphic available
Description	Protein KIAA0240.

BAT3_HUMAN
NC score	0.045917 (rank : 424)	θ value	1.06291 (rank : 186)
Query Neighborhood Hits	354	Target Neighborhood Hits	490	Shared Neighborhood Hits	47
SwissProt Accessions	P46379, O95874, Q5SQ35, Q5SQ36, Q5SQ37, Q5SRP8, Q96SA6, Q9BCN4	Gene names	BAT3, G3
Domain Architecture
Description	Large proline-rich protein BAT3 (HLA-B-associated transcript 3) (Protein G3).

LASS2_MOUSE
NC score	0.045051 (rank : 425)	θ value	6.88961 (rank : 314)
Query Neighborhood Hits	354	Target Neighborhood Hits	51	Shared Neighborhood Hits	33
SwissProt Accessions	Q924Z4, Q3TXC5, Q9DCN6	Gene names	Lass2, Trh3
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 2 (Translocating chain-associating membrane protein homolog 3) (TRAM homolog 3).

PRCC_HUMAN
NC score	0.044251 (rank : 426)	θ value	6.88961 (rank : 320)
Query Neighborhood Hits	354	Target Neighborhood Hits	109	Shared Neighborhood Hits	21
SwissProt Accessions	Q92733, O00665, O00724	Gene names	PRCC, TPRC
Domain Architecture	No domain graphic available
Description	Proline-rich protein PRCC (Papillary renal cell carcinoma translocation-associated gene protein).

NUMBL_HUMAN
NC score	0.044023 (rank : 427)	θ value	1.81305 (rank : 225)
Query Neighborhood Hits	354	Target Neighborhood Hits	394	Shared Neighborhood Hits	47
SwissProt Accessions	Q9Y6R0, Q7Z4J9	Gene names	NUMBL
Domain Architecture
Description	Numb-like protein (Numb-R).

MLL3_HUMAN
NC score	0.043344 (rank : 428)	θ value	0.365318 (rank : 146)
Query Neighborhood Hits	354	Target Neighborhood Hits	1644	Shared Neighborhood Hits	87
SwissProt Accessions	Q8NEZ4, Q8NC02, Q8NDF6, Q9H9P4, Q9NR13, Q9P222, Q9UDR7	Gene names	MLL3, HALR, KIAA1506
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (EC 2.1.1.43) (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (Homologous to ALR protein).

CP007_MOUSE
NC score	0.043292 (rank : 429)	θ value	2.36792 (rank : 230)
Query Neighborhood Hits	354	Target Neighborhood Hits	231	Shared Neighborhood Hits	24
SwissProt Accessions	Q8C190, Q6PFD1	Gene names
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C16orf7 homolog (5-day ovary-specific transcript 1 protein).

TAF6_HUMAN
NC score	0.040984 (rank : 430)	θ value	2.36792 (rank : 239)
Query Neighborhood Hits	354	Target Neighborhood Hits	127	Shared Neighborhood Hits	29
SwissProt Accessions	P49848	Gene names	TAF6, TAF2E, TAFII70
Domain Architecture
Description	Transcription initiation factor TFIID subunit 6 (Transcription initiation factor TFIID 70 kDa subunit) (TAF(II)70) (TAFII-70) (TAFII- 80) (TAFII80).

MAVS_HUMAN
NC score	0.040773 (rank : 431)	θ value	5.27518 (rank : 290)
Query Neighborhood Hits	354	Target Neighborhood Hits	271	Shared Neighborhood Hits	35
SwissProt Accessions	Q7Z434, Q3I0Y2, Q5T7I6, Q86VY7, Q9H1H3, Q9H4Y1, Q9H8D3, Q9ULE9	Gene names	MAVS, IPS1, KIAA1271, VISA
Domain Architecture	No domain graphic available
Description	Mitochondrial antiviral signaling protein (Interferon-beta promoter stimulator protein 1) (IPS-1) (Virus-induced signaling adapter) (CARD adapter inducing interferon-beta) (Cardif) (Putative NF-kappa-B- activating protein 031N).

CIC_MOUSE
NC score	0.040676 (rank : 432)	θ value	5.27518 (rank : 282)
Query Neighborhood Hits	354	Target Neighborhood Hits	742	Shared Neighborhood Hits	69
SwissProt Accessions	Q924A2, Q6PDJ8, Q8CGE4, Q8CHH0, Q9CW61	Gene names	Cic, Kiaa0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

RGS3_MOUSE
NC score	0.039969 (rank : 433)	θ value	4.03905 (rank : 277)
Query Neighborhood Hits	354	Target Neighborhood Hits	1621	Shared Neighborhood Hits	102
SwissProt Accessions	Q9DC04, Q5SRB1, Q5SRB4, Q5SRB8, Q8CEE3, Q8VI25, Q925G9, Q9JL22, Q9JL23, Q9QXA2	Gene names	Rgs3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (C2PA).

UPK3B_HUMAN
NC score	0.039435 (rank : 434)	θ value	0.47712 (rank : 160)
Query Neighborhood Hits	354	Target Neighborhood Hits	29	Shared Neighborhood Hits	5
SwissProt Accessions	Q9BT76, Q86W06	Gene names	UPK3B
Domain Architecture	No domain graphic available
Description	Uroplakin-3B precursor (Uroplakin IIIb) (UPIIIb) (p35).

LR37A_HUMAN
NC score	0.038849 (rank : 435)	θ value	3.0926 (rank : 250)
Query Neighborhood Hits	354	Target Neighborhood Hits	720	Shared Neighborhood Hits	47
SwissProt Accessions	O60309, Q49A01, Q49A80, Q8NB33	Gene names	LRRC37A, KIAA0563
Domain Architecture	No domain graphic available
Description	Leucine-rich repeat-containing protein 37A.

BSN_HUMAN
NC score	0.038843 (rank : 436)	θ value	8.99809 (rank : 325)
Query Neighborhood Hits	354	Target Neighborhood Hits	1537	Shared Neighborhood Hits	92
SwissProt Accessions	Q9UPA5, O43161, Q7LGH3	Gene names	BSN, KIAA0434, ZNF231
Domain Architecture	No domain graphic available
Description	Protein bassoon (Zinc finger protein 231).

BCL9_HUMAN
NC score	0.038371 (rank : 437)	θ value	5.27518 (rank : 281)
Query Neighborhood Hits	354	Target Neighborhood Hits	1008	Shared Neighborhood Hits	78
SwissProt Accessions	O00512	Gene names	BCL9
Domain Architecture	No domain graphic available
Description	B-cell lymphoma 9 protein (Bcl-9) (Legless homolog).

TAF6_MOUSE
NC score	0.037688 (rank : 438)	θ value	5.27518 (rank : 300)
Query Neighborhood Hits	354	Target Neighborhood Hits	110	Shared Neighborhood Hits	25
SwissProt Accessions	Q62311	Gene names	Taf6, Taf2e
Domain Architecture
Description	Transcription initiation factor TFIID subunit 6 (Transcription initiation factor TFIID 70 kDa subunit) (TAF(II)70) (TAFII-70) (TAFII- 80) (TAFII80) (p80).

SFPQ_MOUSE
NC score	0.036626 (rank : 439)	θ value	1.38821 (rank : 212)
Query Neighborhood Hits	354	Target Neighborhood Hits	958	Shared Neighborhood Hits	60
SwissProt Accessions	Q8VIJ6, Q9ERW2	Gene names	Sfpq
Domain Architecture	No domain graphic available
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).

EPN1_MOUSE
NC score	0.035434 (rank : 440)	θ value	0.813845 (rank : 176)
Query Neighborhood Hits	354	Target Neighborhood Hits	240	Shared Neighborhood Hits	40
SwissProt Accessions	Q80VP1, O70446	Gene names	Epn1
Domain Architecture
Description	Epsin-1 (EPS-15-interacting protein 1) (Intersectin-EH-binding protein 1) (Ibp1).

SMRC2_HUMAN
NC score	0.034192 (rank : 441)	θ value	0.62314 (rank : 170)
Query Neighborhood Hits	354	Target Neighborhood Hits	499	Shared Neighborhood Hits	32
SwissProt Accessions	Q8TAQ2, Q92923, Q96E12, Q96GY4	Gene names	SMARCC2, BAF170
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170).

PCQAP_HUMAN
NC score	0.033752 (rank : 442)	θ value	6.88961 (rank : 319)
Query Neighborhood Hits	354	Target Neighborhood Hits	549	Shared Neighborhood Hits	44
SwissProt Accessions	Q96RN5, O15413, Q6IC31, Q8NF16, Q96CT0, Q96IH7, Q9P1T3	Gene names	PCQAP, ARC105, CTG7A, TIG1
Domain Architecture	No domain graphic available
Description	Positive cofactor 2 glutamine/Q-rich-associated protein (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene 1 protein) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a).

PHLB1_HUMAN
NC score	0.032968 (rank : 443)	θ value	1.38821 (rank : 211)
Query Neighborhood Hits	354	Target Neighborhood Hits	1038	Shared Neighborhood Hits	57
SwissProt Accessions	Q86UU1, O75133, Q4KMF8, Q8TEQ2	Gene names	PHLDB1, DLNB07, KIAA0638, LL5A
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 1 (Protein LL5-alpha).

DCR1A_MOUSE
NC score	0.032422 (rank : 444)	θ value	0.0961366 (rank : 119)
Query Neighborhood Hits	354	Target Neighborhood Hits	59	Shared Neighborhood Hits	3
SwissProt Accessions	Q9JIC3, Q571H5, Q6GQR6	Gene names	Dclre1a, Kiaa0086, Snm1, Snm1a
Domain Architecture	No domain graphic available
Description	DNA cross-link repair 1A protein.

SFPQ_HUMAN
NC score	0.032247 (rank : 445)	θ value	3.0926 (rank : 258)
Query Neighborhood Hits	354	Target Neighborhood Hits	986	Shared Neighborhood Hits	60
SwissProt Accessions	P23246, P30808	Gene names	SFPQ, PSF
Domain Architecture
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).

NFH_MOUSE
NC score	0.032069 (rank : 446)	θ value	8.99809 (rank : 340)
Query Neighborhood Hits	354	Target Neighborhood Hits	2247	Shared Neighborhood Hits	105
SwissProt Accessions	P19246, Q5SVF6, Q61959	Gene names	Nefh, Nfh
Domain Architecture
Description	Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H).

NFAC1_HUMAN
NC score	0.030868 (rank : 447)	θ value	0.365318 (rank : 147)
Query Neighborhood Hits	354	Target Neighborhood Hits	312	Shared Neighborhood Hits	41
SwissProt Accessions	O95644, Q12865, Q15793	Gene names	NFATC1, NFAT2, NFATC
Domain Architecture
Description	Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT transcription complex cytosolic component) (NF-ATc1) (NF-ATc).

EPN1_HUMAN
NC score	0.030229 (rank : 448)	θ value	6.88961 (rank : 307)
Query Neighborhood Hits	354	Target Neighborhood Hits	206	Shared Neighborhood Hits	36
SwissProt Accessions	Q9Y6I3, Q86ST3, Q9HA18	Gene names	EPN1
Domain Architecture
Description	Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding mitotic phosphoprotein).

MAP1A_HUMAN
NC score	0.029719 (rank : 449)	θ value	0.813845 (rank : 179)
Query Neighborhood Hits	354	Target Neighborhood Hits	1626	Shared Neighborhood Hits	69
SwissProt Accessions	P78559, O95643, Q12973, Q15882, Q9UJT4	Gene names	MAP1A
Domain Architecture
Description	Microtubule-associated protein 1A (MAP 1A) (Proliferation-related protein p80) [Contains: MAP1 light chain LC2].

CSPG5_MOUSE
NC score	0.028939 (rank : 450)	θ value	2.36792 (rank : 231)
Query Neighborhood Hits	354	Target Neighborhood Hits	211	Shared Neighborhood Hits	16
SwissProt Accessions	Q71M36, Q71M37, Q7TNT8, Q8BPJ5, Q9QY32	Gene names	Cspg5, Caleb, Ngc
Domain Architecture	No domain graphic available
Description	Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan C) (Acidic leucine-rich EGF-like domain-containing brain protein).

MBN3_HUMAN
NC score	0.028898 (rank : 451)	θ value	1.38821 (rank : 207)
Query Neighborhood Hits	354	Target Neighborhood Hits	61	Shared Neighborhood Hits	4
SwissProt Accessions	Q9NUK0, Q5JXN8, Q5JXN9, Q5JXP4, Q6UDQ1, Q8TAD9, Q8TAF4, Q9H0Z7, Q9UF37	Gene names	MBNL3, CHCR, MBLX39, MBXL
Domain Architecture
Description	Muscleblind-like X-linked protein (Muscleblind-like protein 3) (Cys3His CCG1-required protein) (Protein HCHCR).

GTSE1_MOUSE
NC score	0.028797 (rank : 452)	θ value	2.36792 (rank : 234)
Query Neighborhood Hits	354	Target Neighborhood Hits	245	Shared Neighborhood Hits	27
SwissProt Accessions	Q8R080, O89015, Q9CSG9	Gene names	Gtse1, B99
Domain Architecture	No domain graphic available
Description	G2 and S phase expressed protein 1 (Gtse-1) (B99 protein).

MBD5_HUMAN
NC score	0.027924 (rank : 453)	θ value	3.0926 (rank : 251)
Query Neighborhood Hits	354	Target Neighborhood Hits	176	Shared Neighborhood Hits	22
SwissProt Accessions	Q9P267, Q9NUV6	Gene names	MBD5, KIAA1461
Domain Architecture	No domain graphic available
Description	Methyl-CpG-binding domain protein 5 (Methyl-CpG-binding protein MBD5).

CTND2_HUMAN
NC score	0.027680 (rank : 454)	θ value	0.813845 (rank : 173)
Query Neighborhood Hits	354	Target Neighborhood Hits	333	Shared Neighborhood Hits	44
SwissProt Accessions	Q9UQB3, O00379, O15390, O43206, O43840, Q13589, Q9UM66, Q9UPM3	Gene names	CTNND2, NPRAP
Domain Architecture
Description	Catenin delta-2 (Delta-catenin) (Neural plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin) (GT24).

PTN23_HUMAN
NC score	0.026113 (rank : 455)	θ value	0.62314 (rank : 169)
Query Neighborhood Hits	354	Target Neighborhood Hits	646	Shared Neighborhood Hits	53
SwissProt Accessions	Q9H3S7, Q7KZF8, Q8N6Z5, Q9BSR5, Q9P257, Q9UG03, Q9UMZ4	Gene names	PTPN23, KIAA1471
Domain Architecture	No domain graphic available
Description	Tyrosine-protein phosphatase non-receptor type 23 (EC 3.1.3.48) (His- domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14).

CTDP1_HUMAN
NC score	0.025361 (rank : 456)	θ value	4.03905 (rank : 261)
Query Neighborhood Hits	354	Target Neighborhood Hits	416	Shared Neighborhood Hits	35
SwissProt Accessions	Q9Y5B0, Q7Z644, Q96BZ1, Q9Y6F5	Gene names	CTDP1, FCP1
Domain Architecture
Description	RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase).

CTND2_MOUSE
NC score	0.025109 (rank : 457)	θ value	0.62314 (rank : 162)
Query Neighborhood Hits	354	Target Neighborhood Hits	227	Shared Neighborhood Hits	26
SwissProt Accessions	O35927	Gene names	Ctnnd2, Catnd2, Nprap
Domain Architecture
Description	Catenin delta-2 (Neural plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin).

SEN2_HUMAN
NC score	0.024758 (rank : 458)	θ value	1.06291 (rank : 196)
Query Neighborhood Hits	354	Target Neighborhood Hits	13	Shared Neighborhood Hits	2
SwissProt Accessions	Q8NCE0, Q8WTW7, Q9BPU7	Gene names	TSEN2, SEN2
Domain Architecture	No domain graphic available
Description	tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) (HsSen2 protein).

GNAS1_MOUSE
NC score	0.024452 (rank : 459)	θ value	4.03905 (rank : 262)
Query Neighborhood Hits	354	Target Neighborhood Hits	651	Shared Neighborhood Hits	59
SwissProt Accessions	Q6R0H7, Q6R0H4, Q6R0H5, Q6R2J5, Q9JJX0, Q9Z1N8	Gene names	Gnas, Gnas1
Domain Architecture	No domain graphic available
Description	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas (Adenylate cyclase-stimulating G alpha protein) (Extra large alphas protein) (XLalphas).

CSPG5_HUMAN
NC score	0.024247 (rank : 460)	θ value	6.88961 (rank : 306)
Query Neighborhood Hits	354	Target Neighborhood Hits	199	Shared Neighborhood Hits	23
SwissProt Accessions	O95196, Q71M39, Q71M40	Gene names	CSPG5, CALEB, NGC
Domain Architecture	No domain graphic available
Description	Chondroitin sulfate proteoglycan 5 precursor (Neuroglycan C) (Acidic leucine-rich EGF-like domain-containing brain protein).

PF21B_MOUSE
NC score	0.023923 (rank : 461)	θ value	5.27518 (rank : 295)
Query Neighborhood Hits	354	Target Neighborhood Hits	278	Shared Neighborhood Hits	33
SwissProt Accessions	Q8C966	Gene names	Phf21b
Domain Architecture	No domain graphic available
Description	PHD finger protein 21B.

CSKI1_HUMAN
NC score	0.022957 (rank : 462)	θ value	0.62314 (rank : 161)
Query Neighborhood Hits	354	Target Neighborhood Hits	997	Shared Neighborhood Hits	62
SwissProt Accessions	Q8WXD9, Q9P2P0	Gene names	CASKIN1, KIAA1306
Domain Architecture	No domain graphic available
Description	Caskin-1 (CASK-interacting protein 1).

EP400_MOUSE
NC score	0.022908 (rank : 463)	θ value	8.99809 (rank : 328)
Query Neighborhood Hits	354	Target Neighborhood Hits	592	Shared Neighborhood Hits	57
SwissProt Accessions	Q8CHI8, Q80TC8, Q8BXI5, Q8BYW3, Q8C0P6, Q8CHI7, Q8VDF4, Q9DA54	Gene names	Ep400, Kiaa1498
Domain Architecture	No domain graphic available
Description	E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa SWI2/SNF2-related protein) (Domino homolog) (mDomino).

RP1L1_HUMAN
NC score	0.022402 (rank : 464)	θ value	4.03905 (rank : 278)
Query Neighborhood Hits	354	Target Neighborhood Hits	1072	Shared Neighborhood Hits	61
SwissProt Accessions	Q8IWN7, Q86SQ1, Q8IWN8, Q8IWN9, Q8IWP0, Q8IWP1, Q8IWP2	Gene names	RP1L1
Domain Architecture
Description	Retinitis pigmentosa 1-like 1 protein.

PHLB1_MOUSE
NC score	0.020693 (rank : 465)	θ value	8.99809 (rank : 346)
Query Neighborhood Hits	354	Target Neighborhood Hits	678	Shared Neighborhood Hits	33
SwissProt Accessions	Q6PDH0, Q80TV2	Gene names	Phldb1, Kiaa0638, Ll5a
Domain Architecture	No domain graphic available
Description	Pleckstrin homology-like domain family B member 1 (Protein LL5-alpha).

PGCA_MOUSE
NC score	0.020503 (rank : 466)	θ value	3.0926 (rank : 255)
Query Neighborhood Hits	354	Target Neighborhood Hits	643	Shared Neighborhood Hits	37
SwissProt Accessions	Q61282, Q64021	Gene names	Agc1, Agc
Domain Architecture
Description	Aggrecan core protein precursor (Cartilage-specific proteoglycan core protein) (CSPCP).

K0319_MOUSE
NC score	0.020254 (rank : 467)	θ value	3.0926 (rank : 249)
Query Neighborhood Hits	354	Target Neighborhood Hits	134	Shared Neighborhood Hits	14
SwissProt Accessions	Q5SZV5, Q80U39	Gene names	Kiaa0319
Domain Architecture	No domain graphic available
Description	Protein KIAA0319 precursor.

ASPC1_MOUSE
NC score	0.019474 (rank : 468)	θ value	6.88961 (rank : 303)
Query Neighborhood Hits	354	Target Neighborhood Hits	47	Shared Neighborhood Hits	8
SwissProt Accessions	Q8VBT9, Q3UKD1, Q6V7K5, Q9CT64	Gene names	Aspscr1, Tug
Domain Architecture	No domain graphic available
Description	Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosome region candidate 1 homolog).

GP152_HUMAN
NC score	0.019333 (rank : 469)	θ value	2.36792 (rank : 232)
Query Neighborhood Hits	354	Target Neighborhood Hits	636	Shared Neighborhood Hits	39
SwissProt Accessions	Q8TDT2, Q86SM0	Gene names	GPR152, PGR5
Domain Architecture
Description	Probable G-protein coupled receptor 152 (G-protein coupled receptor PGR5).

SOX30_HUMAN
NC score	0.018049 (rank : 470)	θ value	5.27518 (rank : 298)
Query Neighborhood Hits	354	Target Neighborhood Hits	305	Shared Neighborhood Hits	35
SwissProt Accessions	O94993, O94995, Q8IYX6	Gene names	SOX30
Domain Architecture
Description	Transcription factor SOX-30.

YTHD2_HUMAN
NC score	0.017968 (rank : 471)	θ value	1.38821 (rank : 215)
Query Neighborhood Hits	354	Target Neighborhood Hits	89	Shared Neighborhood Hits	12
SwissProt Accessions	Q9Y5A9, Q5VSZ9, Q8TDH0, Q9BUJ5	Gene names	YTHDF2, HGRG8
Domain Architecture
Description	YTH domain family protein 2 (High-glucose-regulated protein 8) (NY- REN-2 antigen) (CLL-associated antigen KW-14).

CRSP7_HUMAN
NC score	0.017715 (rank : 472)	θ value	5.27518 (rank : 283)
Query Neighborhood Hits	354	Target Neighborhood Hits	247	Shared Neighborhood Hits	16
SwissProt Accessions	O95402	Gene names	CRSP7, ARC70
Domain Architecture
Description	CRSP complex subunit 7 (Cofactor required for Sp1 transcriptional activation subunit 7) (Transcriptional coactivator CRSP70) (Activator- recruited cofactor 70 kDa component) (ARC70).

CCD96_MOUSE
NC score	0.017538 (rank : 473)	θ value	0.279714 (rank : 140)
Query Neighborhood Hits	354	Target Neighborhood Hits	704	Shared Neighborhood Hits	25
SwissProt Accessions	Q9CR92	Gene names	Ccdc96
Domain Architecture	No domain graphic available
Description	Coiled-coil domain-containing protein 96.

WNK2_HUMAN
NC score	0.016693 (rank : 474)	θ value	0.125558 (rank : 123)
Query Neighborhood Hits	354	Target Neighborhood Hits	1407	Shared Neighborhood Hits	75
SwissProt Accessions	Q9Y3S1, Q8IY36, Q9C0A3, Q9H3P4	Gene names	WNK2, KIAA1760, PRKWNK2
Domain Architecture
Description	Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2).

SIP1_MOUSE
NC score	0.015570 (rank : 475)	θ value	1.38821 (rank : 213)
Query Neighborhood Hits	354	Target Neighborhood Hits	870	Shared Neighborhood Hits	42
SwissProt Accessions	Q9R0G7	Gene names	Zfhx1b, Sip1, Zfx1b
Domain Architecture
Description	Zinc finger homeobox protein 1b (Smad-interacting protein 1).

TNC6B_HUMAN
NC score	0.015347 (rank : 476)	θ value	5.27518 (rank : 301)
Query Neighborhood Hits	354	Target Neighborhood Hits	256	Shared Neighborhood Hits	23
SwissProt Accessions	Q9UPQ9, Q5TH52, Q8TBX2	Gene names	TNRC6B, KIAA1093
Domain Architecture
Description	Trinucleotide repeat-containing 6B protein.

HPS4_MOUSE
NC score	0.015078 (rank : 477)	θ value	8.99809 (rank : 332)
Query Neighborhood Hits	354	Target Neighborhood Hits	80	Shared Neighborhood Hits	14
SwissProt Accessions	Q99KG7	Gene names	Hps4, Le
Domain Architecture	No domain graphic available
Description	Hermansky-Pudlak syndrome 4 protein homolog (Light-ear protein) (Le protein).

CO7A1_HUMAN
NC score	0.014691 (rank : 478)	θ value	1.81305 (rank : 216)
Query Neighborhood Hits	354	Target Neighborhood Hits	807	Shared Neighborhood Hits	51
SwissProt Accessions	Q02388, Q14054, Q16507	Gene names	COL7A1
Domain Architecture
Description	Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen).

TCF8_MOUSE
NC score	0.014579 (rank : 479)	θ value	0.0961366 (rank : 122)
Query Neighborhood Hits	354	Target Neighborhood Hits	1067	Shared Neighborhood Hits	49
SwissProt Accessions	Q64318, Q62519	Gene names	Tcf8, Zfhx1a, Zfx1a, Zfx1ha
Domain Architecture
Description	Transcription factor 8 (Zinc finger homeobox protein 1a) (MEB1) (Delta EF1).

FCRLA_HUMAN
NC score	0.014081 (rank : 480)	θ value	3.0926 (rank : 246)
Query Neighborhood Hits	354	Target Neighborhood Hits	135	Shared Neighborhood Hits	11
SwissProt Accessions	Q7L513, Q5VXA1, Q5VXA2, Q5VXA3, Q5VXB0, Q8NEW4, Q8WXH3, Q96PC6, Q96PJ0, Q96PJ1, Q96PJ2, Q96PJ4, Q9BR57	Gene names	FCRLA, FCRL, FCRL1, FCRLM1, FCRX, FREB
Domain Architecture	No domain graphic available
Description	Fc receptor-like and mucin-like 1 precursor (Fc receptor-like A) (Fc receptor homolog expressed in B-cells) (Fc receptor-related protein X) (FcRX) (Fc receptor-like protein).

LCP2_MOUSE
NC score	0.013799 (rank : 481)	θ value	8.99809 (rank : 333)
Query Neighborhood Hits	354	Target Neighborhood Hits	177	Shared Neighborhood Hits	15
SwissProt Accessions	Q60787	Gene names	Lcp2
Domain Architecture
Description	Lymphocyte cytosolic protein 2 (SH2 domain-containing leukocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76).

FLNA_MOUSE
NC score	0.012044 (rank : 482)	θ value	1.81305 (rank : 219)
Query Neighborhood Hits	354	Target Neighborhood Hits	142	Shared Neighborhood Hits	6
SwissProt Accessions	Q8BTM8, O54934, Q7TQI1, Q8BLK1, Q8BTN7, Q8VHX5, Q8VHX8, Q99KQ2	Gene names	Flna, Fln, Fln1
Domain Architecture
Description	Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial actin-binding protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle filamin).

FLNA_HUMAN
NC score	0.011921 (rank : 483)	θ value	1.81305 (rank : 218)
Query Neighborhood Hits	354	Target Neighborhood Hits	138	Shared Neighborhood Hits	6
SwissProt Accessions	P21333	Gene names	FLNA, FLN, FLN1
Domain Architecture
Description	Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial actin-binding protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle filamin).

TFE3_HUMAN
NC score	0.011224 (rank : 484)	θ value	3.0926 (rank : 259)
Query Neighborhood Hits	354	Target Neighborhood Hits	190	Shared Neighborhood Hits	7
SwissProt Accessions	P19532, Q92757, Q92758, Q99964	Gene names	TFE3
Domain Architecture
Description	Transcription factor E3.

CSPG3_MOUSE
NC score	0.011158 (rank : 485)	θ value	8.99809 (rank : 326)
Query Neighborhood Hits	354	Target Neighborhood Hits	657	Shared Neighborhood Hits	47
SwissProt Accessions	P55066, Q6P1E3, Q8C4F8	Gene names	Cspg3, Ncan
Domain Architecture
Description	Neurocan core protein precursor (Chondroitin sulfate proteoglycan 3).

CO4A6_HUMAN
NC score	0.010672 (rank : 486)	θ value	6.88961 (rank : 305)
Query Neighborhood Hits	354	Target Neighborhood Hits	318	Shared Neighborhood Hits	34
SwissProt Accessions	Q14031, Q12823, Q14053, Q5JYH6, Q9NQM5, Q9NTX3, Q9UJ76, Q9UMG6, Q9Y4L4	Gene names	COL4A6
Domain Architecture
Description	Collagen alpha-6(IV) chain precursor.

SNRPA_HUMAN
NC score	0.010292 (rank : 487)	θ value	8.99809 (rank : 351)
Query Neighborhood Hits	354	Target Neighborhood Hits	128	Shared Neighborhood Hits	10
SwissProt Accessions	P09012	Gene names	SNRPA
Domain Architecture
Description	U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A protein) (U1-A).

ASPP2_HUMAN
NC score	0.009706 (rank : 488)	θ value	3.0926 (rank : 243)
Query Neighborhood Hits	354	Target Neighborhood Hits	1156	Shared Neighborhood Hits	31
SwissProt Accessions	Q13625, Q12892, Q86X75, Q96KQ3	Gene names	TP53BP2, ASPP2, BBP
Domain Architecture
Description	Apoptosis-stimulating of p53 protein 2 (Tumor suppressor p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen).

NAB2_HUMAN
NC score	0.009705 (rank : 489)	θ value	8.99809 (rank : 339)
Query Neighborhood Hits	354	Target Neighborhood Hits	51	Shared Neighborhood Hits	7
SwissProt Accessions	Q15742, O76006, Q14797	Gene names	NAB2, MADER
Domain Architecture
Description	NGFI-A-binding protein 2 (EGR-1-binding protein 2) (Melanoma- associated delayed early response protein) (Protein MADER).

GRIP1_MOUSE
NC score	0.008278 (rank : 490)	θ value	1.38821 (rank : 205)
Query Neighborhood Hits	354	Target Neighborhood Hits	241	Shared Neighborhood Hits	6
SwissProt Accessions	Q925T6, Q8BLQ3, Q8C0T3, Q925T5, Q925T7	Gene names	Grip1
Domain Architecture
Description	Glutamate receptor-interacting protein 1 (GRIP1 protein).

SPEG_MOUSE
NC score	0.008254 (rank : 491)	θ value	0.21417 (rank : 136)
Query Neighborhood Hits	354	Target Neighborhood Hits	1959	Shared Neighborhood Hits	82
SwissProt Accessions	Q62407, Q3TPH8, Q6P5V1, Q80TF7, Q80ZN0, Q8BZF4, Q9EQJ5	Gene names	Speg, Apeg1, Kiaa1297
Domain Architecture
Description	Striated muscle-specific serine/threonine protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

FLRT1_HUMAN
NC score	0.007899 (rank : 492)	θ value	0.0563607 (rank : 98)
Query Neighborhood Hits	354	Target Neighborhood Hits	286	Shared Neighborhood Hits	5
SwissProt Accessions	Q9NZU1	Gene names	FLRT1
Domain Architecture
Description	Leucine-rich repeat transmembrane protein FLRT1 precursor (Fibronectin-like domain-containing leucine-rich transmembrane protein 1).

SIP1_HUMAN
NC score	0.007114 (rank : 493)	θ value	6.88961 (rank : 322)
Query Neighborhood Hits	354	Target Neighborhood Hits	832	Shared Neighborhood Hits	37
SwissProt Accessions	O60315, Q9UED1	Gene names	ZFHX1B, KIAA0569, SIP1, ZFX1B
Domain Architecture
Description	Zinc finger homeobox protein 1b (Smad-interacting protein 1) (SMADIP1).

PTPRJ_HUMAN
NC score	0.005476 (rank : 494)	θ value	3.0926 (rank : 257)
Query Neighborhood Hits	354	Target Neighborhood Hits	207	Shared Neighborhood Hits	6
SwissProt Accessions	Q12913, Q15255, Q8NHM2	Gene names	PTPRJ, DEP1
Domain Architecture
Description	Receptor-type tyrosine-protein phosphatase eta precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase eta) (R-PTP-eta) (HPTP eta) (Protein- tyrosine phosphatase receptor type J) (Density-enhanced phosphatase 1) (DEP-1) (CD148 antigen).

CTTB2_HUMAN
NC score	0.004986 (rank : 495)	θ value	3.0926 (rank : 245)
Query Neighborhood Hits	354	Target Neighborhood Hits	1061	Shared Neighborhood Hits	25
SwissProt Accessions	Q8WZ74, O43389, Q7LG11, Q9C0A5	Gene names	CTTNBP2, C7orf8, CORTBP2, KIAA1758
Domain Architecture	No domain graphic available
Description	Cortactin-binding protein 2 (CortBP2).

HDAC5_MOUSE
NC score	0.004691 (rank : 496)	θ value	5.27518 (rank : 285)
Query Neighborhood Hits	354	Target Neighborhood Hits	310	Shared Neighborhood Hits	9
SwissProt Accessions	Q9Z2V6, Q9JL73	Gene names	Hdac5
Domain Architecture
Description	Histone deacetylase 5 (HD5) (Histone deacetylase mHDA1).

ZN516_MOUSE
NC score	0.004309 (rank : 497)	θ value	1.81305 (rank : 228)
Query Neighborhood Hits	354	Target Neighborhood Hits	1197	Shared Neighborhood Hits	56
SwissProt Accessions	Q7TSH3	Gene names	Znf516, Kiaa0222, Zfp516
Domain Architecture
Description	Zinc finger protein 516.

CSMD3_HUMAN
NC score	0.004290 (rank : 498)	θ value	1.81305 (rank : 217)
Query Neighborhood Hits	354	Target Neighborhood Hits	199	Shared Neighborhood Hits	7
SwissProt Accessions	Q7Z407, Q96PZ3	Gene names	CSMD3, KIAA1894
Domain Architecture
Description	CUB and sushi domain-containing protein 3 precursor (CUB and sushi multiple domains protein 3).

TENX_HUMAN
NC score	0.003960 (rank : 499)	θ value	2.36792 (rank : 240)
Query Neighborhood Hits	354	Target Neighborhood Hits	789	Shared Neighborhood Hits	22
SwissProt Accessions	P22105, P78530, P78531, Q08424, Q9UMG7	Gene names	TNXB, HXBL, TNX, XB
Domain Architecture
Description	Tenascin-X precursor (TN-X) (Hexabrachion-like protein).

PUNC_MOUSE
NC score	0.003432 (rank : 500)	θ value	4.03905 (rank : 276)
Query Neighborhood Hits	354	Target Neighborhood Hits	501	Shared Neighborhood Hits	21
SwissProt Accessions	Q8BQC3, O70246, Q792T2, Q9Z2S6	Gene names	Punc
Domain Architecture	No domain graphic available
Description	Putative neuronal cell adhesion molecule precursor.

LAMA5_HUMAN
NC score	0.002753 (rank : 501)	θ value	4.03905 (rank : 268)
Query Neighborhood Hits	354	Target Neighborhood Hits	976	Shared Neighborhood Hits	28
SwissProt Accessions	O15230, Q8WZA7, Q9H1P1	Gene names	LAMA5, KIAA0533, KIAA1907
Domain Architecture
Description	Laminin alpha-5 chain precursor.

VSIG2_MOUSE
NC score	0.002216 (rank : 502)	θ value	8.99809 (rank : 354)
Query Neighborhood Hits	354	Target Neighborhood Hits	316	Shared Neighborhood Hits	7
SwissProt Accessions	Q9Z109, Q9CVA4, Q9D0T4	Gene names	Vsig2, Ctm, Ctxl
Domain Architecture	No domain graphic available
Description	V-set and immunoglobulin domain-containing protein 2 precursor (CT- like protein) (Cortical thymocyte-like protein).

NOTC1_HUMAN
NC score	0.000483 (rank : 503)	θ value	1.38821 (rank : 208)
Query Neighborhood Hits	354	Target Neighborhood Hits	906	Shared Neighborhood Hits	16
SwissProt Accessions	P46531	Gene names	NOTCH1, TAN1
Domain Architecture
Description	Neurogenic locus notch homolog protein 1 precursor (Notch 1) (hN1) (Translocation-associated notch protein TAN-1) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain].

GLI1_HUMAN
NC score	0.000137 (rank : 504)	θ value	1.38821 (rank : 204)
Query Neighborhood Hits	354	Target Neighborhood Hits	828	Shared Neighborhood Hits	28
SwissProt Accessions	P08151, Q8TDN9	Gene names	GLI1, GLI
Domain Architecture	No domain graphic available
Description	Zinc finger protein GLI1 (Glioma-associated oncogene) (Oncogene GLI).

GLI2_HUMAN
NC score	0.000078 (rank : 505)	θ value	8.99809 (rank : 329)
Query Neighborhood Hits	354	Target Neighborhood Hits	971	Shared Neighborhood Hits	34
SwissProt Accessions	P10070, O60252, O60253, O60254, O60255, Q15590, Q15591	Gene names	GLI2, THP
Domain Architecture	No domain graphic available
Description	Zinc finger protein GLI2 (Tax helper protein).

PGBM_HUMAN
NC score	-0.000109 (rank : 506)	θ value	5.27518 (rank : 296)
Query Neighborhood Hits	354	Target Neighborhood Hits	1113	Shared Neighborhood Hits	26
SwissProt Accessions	P98160, Q16287, Q9H3V5	Gene names	HSPG2
Domain Architecture
Description	Basement membrane-specific heparan sulfate proteoglycan core protein precursor (HSPG) (Perlecan) (PLC).

PAK6_HUMAN
NC score	-0.006248 (rank : 507)	θ value	6.88961 (rank : 316)
Query Neighborhood Hits	354	Target Neighborhood Hits	915	Shared Neighborhood Hits	14
SwissProt Accessions	Q9NQU5	Gene names	PAK6, PAK5
Domain Architecture
Description	Serine/threonine-protein kinase PAK 6 (EC 2.7.11.1) (p21-activated kinase 6) (PAK-6) (PAK-5).