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Network neighborhood for query Sequence : HXB3_MOUSE

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HXB3_MOUSE
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

HXB3_HUMAN
θ value	0 (rank : 1)	NC score	0.992491 (rank : 2)
Query Neighborhood Hits	493	Target Neighborhood Hits	559	Shared Neighborhood Hits	448
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HXB3_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	493	Target Neighborhood Hits	493	Shared Neighborhood Hits	493
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

HXD3_HUMAN
θ value	3.0147e-88 (rank : 3)	NC score	0.978233 (rank : 3)
Query Neighborhood Hits	493	Target Neighborhood Hits	433	Shared Neighborhood Hits	324
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

HXD3_MOUSE
θ value	3.93732e-88 (rank : 4)	NC score	0.977851 (rank : 4)
Query Neighborhood Hits	493	Target Neighborhood Hits	435	Shared Neighborhood Hits	326
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

HXA3_HUMAN
θ value	7.68416e-84 (rank : 5)	NC score	0.971552 (rank : 5)
Query Neighborhood Hits	493	Target Neighborhood Hits	535	Shared Neighborhood Hits	328
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXA3_MOUSE
θ value	9.39325e-82 (rank : 6)	NC score	0.969638 (rank : 6)
Query Neighborhood Hits	493	Target Neighborhood Hits	558	Shared Neighborhood Hits	328
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

HXA2_MOUSE
θ value	3.39556e-23 (rank : 7)	NC score	0.945774 (rank : 10)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	311
SwissProt Accessions	P31245, Q149U3, Q920T8	Gene names	Hoxa2, Hox-1.11, Hoxa-2
Domain Architecture
Description	Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11).

HXA2_HUMAN
θ value	7.56453e-23 (rank : 8)	NC score	0.944773 (rank : 11)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	320
SwissProt Accessions	O43364	Gene names	HOXA2
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A2.

HXB2_MOUSE
θ value	7.56453e-23 (rank : 9)	NC score	0.946159 (rank : 9)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	310
SwissProt Accessions	P0C1T1	Gene names	Hoxb2, Hox-2.8
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-B2 (Hox-2.8).

HXA5_HUMAN
θ value	2.87452e-22 (rank : 10)	NC score	0.936600 (rank : 26)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	303
SwissProt Accessions	P20719, O43367, Q96CY6	Gene names	HOXA5, HOX1C
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1C).

HXA5_MOUSE
θ value	2.87452e-22 (rank : 11)	NC score	0.936713 (rank : 25)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	305
SwissProt Accessions	P09021, Q91VQ5	Gene names	Hoxa5, Hox-1.3, Hoxa-5
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1.3) (M2).

HXA4_MOUSE
θ value	6.40375e-22 (rank : 12)	NC score	0.938252 (rank : 17)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	316
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

HXB2_HUMAN
θ value	6.40375e-22 (rank : 13)	NC score	0.943849 (rank : 12)
Query Neighborhood Hits	493	Target Neighborhood Hits	367	Shared Neighborhood Hits	314
SwissProt Accessions	P14652, P10913, P17485	Gene names	HOXB2, HOX2H
Domain Architecture
Description	Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8).

HXB5_HUMAN
θ value	1.09232e-21 (rank : 14)	NC score	0.936280 (rank : 27)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	302
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

HXB5_MOUSE
θ value	1.09232e-21 (rank : 15)	NC score	0.935454 (rank : 29)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	302
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXC4_MOUSE
θ value	7.0802e-21 (rank : 16)	NC score	0.935043 (rank : 31)
Query Neighborhood Hits	493	Target Neighborhood Hits	365	Shared Neighborhood Hits	316
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

HXD4_MOUSE
θ value	1.5773e-20 (rank : 17)	NC score	0.936966 (rank : 24)
Query Neighborhood Hits	493	Target Neighborhood Hits	339	Shared Neighborhood Hits	306
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

HXC4_HUMAN
θ value	2.69047e-20 (rank : 18)	NC score	0.933928 (rank : 33)
Query Neighborhood Hits	493	Target Neighborhood Hits	361	Shared Neighborhood Hits	313
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXD4_HUMAN
θ value	3.51386e-20 (rank : 19)	NC score	0.938276 (rank : 16)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	304
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

HXA4_HUMAN
θ value	4.58923e-20 (rank : 20)	NC score	0.938205 (rank : 18)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	313
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

IPF1_HUMAN
θ value	4.58923e-20 (rank : 21)	NC score	0.948811 (rank : 8)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	308
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

IPF1_MOUSE
θ value	4.58923e-20 (rank : 22)	NC score	0.949019 (rank : 7)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	312
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

HXB4_HUMAN
θ value	5.99374e-20 (rank : 23)	NC score	0.935849 (rank : 28)
Query Neighborhood Hits	493	Target Neighborhood Hits	376	Shared Neighborhood Hits	318
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXB4_MOUSE
θ value	5.99374e-20 (rank : 24)	NC score	0.932759 (rank : 35)
Query Neighborhood Hits	493	Target Neighborhood Hits	375	Shared Neighborhood Hits	313
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

HXC5_HUMAN
θ value	5.99374e-20 (rank : 25)	NC score	0.937330 (rank : 21)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	302
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HXC5_MOUSE
θ value	5.99374e-20 (rank : 26)	NC score	0.937107 (rank : 23)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	302
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

HXB1_MOUSE
θ value	2.27762e-19 (rank : 27)	NC score	0.935286 (rank : 30)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	317
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

HXA7_MOUSE
θ value	1.13037e-18 (rank : 28)	NC score	0.927943 (rank : 42)
Query Neighborhood Hits	493	Target Neighborhood Hits	318	Shared Neighborhood Hits	304
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXA7_HUMAN
θ value	2.5182e-18 (rank : 29)	NC score	0.930063 (rank : 37)
Query Neighborhood Hits	493	Target Neighborhood Hits	309	Shared Neighborhood Hits	302
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXB1_HUMAN
θ value	2.5182e-18 (rank : 30)	NC score	0.934222 (rank : 32)
Query Neighborhood Hits	493	Target Neighborhood Hits	356	Shared Neighborhood Hits	321
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

HXB7_MOUSE
θ value	4.29542e-18 (rank : 31)	NC score	0.928697 (rank : 40)
Query Neighborhood Hits	493	Target Neighborhood Hits	314	Shared Neighborhood Hits	304
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXA6_HUMAN
θ value	5.60996e-18 (rank : 32)	NC score	0.923336 (rank : 48)
Query Neighborhood Hits	493	Target Neighborhood Hits	309	Shared Neighborhood Hits	300
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

HXA6_MOUSE
θ value	5.60996e-18 (rank : 33)	NC score	0.923736 (rank : 47)
Query Neighborhood Hits	493	Target Neighborhood Hits	304	Shared Neighborhood Hits	296
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

HXB7_HUMAN
θ value	5.60996e-18 (rank : 34)	NC score	0.929696 (rank : 38)
Query Neighborhood Hits	493	Target Neighborhood Hits	311	Shared Neighborhood Hits	304
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

GSH2_HUMAN
θ value	9.56915e-18 (rank : 35)	NC score	0.939345 (rank : 15)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	306
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

GSHI_HUMAN
θ value	2.13179e-17 (rank : 36)	NC score	0.940992 (rank : 13)
Query Neighborhood Hits	493	Target Neighborhood Hits	314	Shared Neighborhood Hits	306
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

GSHI_MOUSE
θ value	2.13179e-17 (rank : 37)	NC score	0.940509 (rank : 14)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	304
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

GSH2_MOUSE
θ value	3.63628e-17 (rank : 38)	NC score	0.937561 (rank : 19)
Query Neighborhood Hits	493	Target Neighborhood Hits	319	Shared Neighborhood Hits	304
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HXB6_HUMAN
θ value	3.63628e-17 (rank : 39)	NC score	0.924980 (rank : 46)
Query Neighborhood Hits	493	Target Neighborhood Hits	307	Shared Neighborhood Hits	297
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXB6_MOUSE
θ value	3.63628e-17 (rank : 40)	NC score	0.925204 (rank : 43)
Query Neighborhood Hits	493	Target Neighborhood Hits	309	Shared Neighborhood Hits	297
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

HXC6_HUMAN
θ value	6.20254e-17 (rank : 41)	NC score	0.925059 (rank : 44)
Query Neighborhood Hits	493	Target Neighborhood Hits	306	Shared Neighborhood Hits	298
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
θ value	6.20254e-17 (rank : 42)	NC score	0.925059 (rank : 45)
Query Neighborhood Hits	493	Target Neighborhood Hits	306	Shared Neighborhood Hits	298
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

HXD1_MOUSE
θ value	1.058e-16 (rank : 43)	NC score	0.930908 (rank : 36)
Query Neighborhood Hits	493	Target Neighborhood Hits	381	Shared Neighborhood Hits	316
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

HXB9_MOUSE
θ value	1.38178e-16 (rank : 44)	NC score	0.907651 (rank : 73)
Query Neighborhood Hits	493	Target Neighborhood Hits	344	Shared Neighborhood Hits	314
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HXB9_HUMAN
θ value	1.80466e-16 (rank : 45)	NC score	0.906660 (rank : 78)
Query Neighborhood Hits	493	Target Neighborhood Hits	344	Shared Neighborhood Hits	316
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HXA9_HUMAN
θ value	2.35696e-16 (rank : 46)	NC score	0.911106 (rank : 65)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	307
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA9_MOUSE
θ value	2.35696e-16 (rank : 47)	NC score	0.911949 (rank : 63)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	307
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXD1_HUMAN
θ value	2.35696e-16 (rank : 48)	NC score	0.933402 (rank : 34)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	313
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

HLXB9_HUMAN
θ value	5.25075e-16 (rank : 49)	NC score	0.937471 (rank : 20)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	315
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

HLXB9_MOUSE
θ value	5.25075e-16 (rank : 50)	NC score	0.937123 (rank : 22)
Query Neighborhood Hits	493	Target Neighborhood Hits	354	Shared Neighborhood Hits	320
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

HXA1_HUMAN
θ value	5.25075e-16 (rank : 51)	NC score	0.928440 (rank : 41)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	315
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXA1_MOUSE
θ value	5.25075e-16 (rank : 52)	NC score	0.928968 (rank : 39)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	316
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

BSH_MOUSE
θ value	1.16975e-15 (rank : 53)	NC score	0.916876 (rank : 57)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	316
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

MEOX1_HUMAN
θ value	1.16975e-15 (rank : 54)	NC score	0.923130 (rank : 50)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	308
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

HXD9_HUMAN
θ value	1.52774e-15 (rank : 55)	NC score	0.912338 (rank : 62)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	313
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXD9_MOUSE
θ value	1.52774e-15 (rank : 56)	NC score	0.909346 (rank : 68)
Query Neighborhood Hits	493	Target Neighborhood Hits	359	Shared Neighborhood Hits	311
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

HXB8_HUMAN
θ value	1.99529e-15 (rank : 57)	NC score	0.907430 (rank : 75)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	310
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

HXB8_MOUSE
θ value	1.99529e-15 (rank : 58)	NC score	0.907593 (rank : 74)
Query Neighborhood Hits	493	Target Neighborhood Hits	325	Shared Neighborhood Hits	311
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

HXC9_HUMAN
θ value	1.99529e-15 (rank : 59)	NC score	0.899887 (rank : 91)
Query Neighborhood Hits	493	Target Neighborhood Hits	339	Shared Neighborhood Hits	311
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
θ value	1.99529e-15 (rank : 60)	NC score	0.900037 (rank : 90)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	311
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

GBX1_HUMAN
θ value	7.58209e-15 (rank : 61)	NC score	0.916808 (rank : 58)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	295
SwissProt Accessions	Q14549	Gene names	GBX1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

MEOX1_MOUSE
θ value	7.58209e-15 (rank : 62)	NC score	0.923255 (rank : 49)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	315
SwissProt Accessions	P32442	Gene names	Meox1, Mox-1, Mox1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

GBX1_MOUSE
θ value	9.90251e-15 (rank : 63)	NC score	0.915036 (rank : 60)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	294
SwissProt Accessions	P82976, Q8CGW5	Gene names	Gbx1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

HXD8_HUMAN
θ value	1.29331e-14 (rank : 64)	NC score	0.908473 (rank : 69)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	309
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HXD8_MOUSE
θ value	1.29331e-14 (rank : 65)	NC score	0.908172 (rank : 70)
Query Neighborhood Hits	493	Target Neighborhood Hits	333	Shared Neighborhood Hits	308
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

GBX2_HUMAN
θ value	3.76295e-14 (rank : 66)	NC score	0.910086 (rank : 67)
Query Neighborhood Hits	493	Target Neighborhood Hits	322	Shared Neighborhood Hits	294
SwissProt Accessions	P52951, O43833, Q53RX5, Q9Y5Y1	Gene names	GBX2
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2).

GBX2_MOUSE
θ value	3.76295e-14 (rank : 67)	NC score	0.910139 (rank : 66)
Query Neighborhood Hits	493	Target Neighborhood Hits	326	Shared Neighborhood Hits	294
SwissProt Accessions	P48031	Gene names	Gbx2, Mmoxa, Stra7
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2) (Homeobox protein STRA7).

HXC8_HUMAN
θ value	4.91457e-14 (rank : 68)	NC score	0.902339 (rank : 85)
Query Neighborhood Hits	493	Target Neighborhood Hits	327	Shared Neighborhood Hits	304
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXC8_MOUSE
θ value	4.91457e-14 (rank : 69)	NC score	0.902390 (rank : 84)
Query Neighborhood Hits	493	Target Neighborhood Hits	327	Shared Neighborhood Hits	304
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC10_HUMAN
θ value	6.41864e-14 (rank : 70)	NC score	0.895153 (rank : 110)
Query Neighborhood Hits	493	Target Neighborhood Hits	417	Shared Neighborhood Hits	305
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

CDX4_HUMAN
θ value	1.09485e-13 (rank : 71)	NC score	0.912770 (rank : 61)
Query Neighborhood Hits	493	Target Neighborhood Hits	366	Shared Neighborhood Hits	309
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

HXC10_MOUSE
θ value	1.09485e-13 (rank : 72)	NC score	0.893985 (rank : 113)
Query Neighborhood Hits	493	Target Neighborhood Hits	417	Shared Neighborhood Hits	305
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXD10_HUMAN
θ value	1.86753e-13 (rank : 73)	NC score	0.893646 (rank : 114)
Query Neighborhood Hits	493	Target Neighborhood Hits	392	Shared Neighborhood Hits	315
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
θ value	1.86753e-13 (rank : 74)	NC score	0.893411 (rank : 115)
Query Neighborhood Hits	493	Target Neighborhood Hits	392	Shared Neighborhood Hits	315
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HXA10_MOUSE
θ value	5.43371e-13 (rank : 75)	NC score	0.897720 (rank : 98)
Query Neighborhood Hits	493	Target Neighborhood Hits	365	Shared Neighborhood Hits	308
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

EVX2_HUMAN
θ value	7.09661e-13 (rank : 76)	NC score	0.903050 (rank : 82)
Query Neighborhood Hits	493	Target Neighborhood Hits	325	Shared Neighborhood Hits	301
SwissProt Accessions	Q03828	Gene names	EVX2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

EVX2_MOUSE
θ value	7.09661e-13 (rank : 77)	NC score	0.903319 (rank : 80)
Query Neighborhood Hits	493	Target Neighborhood Hits	327	Shared Neighborhood Hits	302
SwissProt Accessions	P49749	Gene names	Evx2, Evx-2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

HXA10_HUMAN
θ value	7.09661e-13 (rank : 78)	NC score	0.899162 (rank : 93)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	299
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXD11_HUMAN
θ value	7.09661e-13 (rank : 79)	NC score	0.908170 (rank : 71)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	311
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

HXD11_MOUSE
θ value	7.09661e-13 (rank : 80)	NC score	0.907240 (rank : 77)
Query Neighborhood Hits	493	Target Neighborhood Hits	376	Shared Neighborhood Hits	312
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HXC11_HUMAN
θ value	9.26847e-13 (rank : 81)	NC score	0.902825 (rank : 83)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	308
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

CDX2_HUMAN
θ value	1.2105e-12 (rank : 82)	NC score	0.918581 (rank : 52)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	300
SwissProt Accessions	Q99626, O00503, Q969L8	Gene names	CDX2, CDX3
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3).

HXA11_MOUSE
θ value	1.2105e-12 (rank : 83)	NC score	0.899386 (rank : 92)
Query Neighborhood Hits	493	Target Neighborhood Hits	327	Shared Neighborhood Hits	298
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

EVX1_HUMAN
θ value	1.58096e-12 (rank : 84)	NC score	0.898060 (rank : 97)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	305
SwissProt Accessions	P49640	Gene names	EVX1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

EVX1_MOUSE
θ value	1.58096e-12 (rank : 85)	NC score	0.901626 (rank : 88)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	304
SwissProt Accessions	P23683	Gene names	Evx1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

CDX2_MOUSE
θ value	2.0648e-12 (rank : 86)	NC score	0.920391 (rank : 51)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	300
SwissProt Accessions	P43241	Gene names	Cdx2, Cdx-2
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2).

CDX4_MOUSE
θ value	2.0648e-12 (rank : 87)	NC score	0.911128 (rank : 64)
Query Neighborhood Hits	493	Target Neighborhood Hits	378	Shared Neighborhood Hits	306
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

HXD12_HUMAN
θ value	2.69671e-12 (rank : 88)	NC score	0.908127 (rank : 72)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	304
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXD12_MOUSE
θ value	4.59992e-12 (rank : 89)	NC score	0.898858 (rank : 94)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	304
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

PAX3_HUMAN
θ value	4.59992e-12 (rank : 90)	NC score	0.704788 (rank : 234)
Query Neighborhood Hits	493	Target Neighborhood Hits	513	Shared Neighborhood Hits	332
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PAX3_MOUSE
θ value	4.59992e-12 (rank : 91)	NC score	0.705599 (rank : 233)
Query Neighborhood Hits	493	Target Neighborhood Hits	478	Shared Neighborhood Hits	327
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

HXA11_HUMAN
θ value	6.00763e-12 (rank : 92)	NC score	0.901657 (rank : 86)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	300
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

BARX1_HUMAN
θ value	7.84624e-12 (rank : 93)	NC score	0.907425 (rank : 76)
Query Neighborhood Hits	493	Target Neighborhood Hits	326	Shared Neighborhood Hits	302
SwissProt Accessions	Q9HBU1	Gene names	BARX1
Domain Architecture
Description	Homeobox protein BarH-like 1.

CDX1_HUMAN
θ value	7.84624e-12 (rank : 94)	NC score	0.917588 (rank : 55)
Query Neighborhood Hits	493	Target Neighborhood Hits	382	Shared Neighborhood Hits	302
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX1_MOUSE
θ value	7.84624e-12 (rank : 95)	NC score	0.917354 (rank : 56)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	301
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

BARX1_MOUSE
θ value	1.02475e-11 (rank : 96)	NC score	0.905394 (rank : 79)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	302
SwissProt Accessions	Q9ER42, O09066, P70159, Q9ERV2	Gene names	Barx1
Domain Architecture
Description	Homeobox protein BarH-like 1.

HXC12_HUMAN
θ value	1.02475e-11 (rank : 97)	NC score	0.897408 (rank : 102)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	299
SwissProt Accessions	P31275, Q9BXJ6	Gene names	HOXC12, HOX3F
Domain Architecture
Description	Homeobox protein Hox-C12 (Hox-3F).

MEOX2_HUMAN
θ value	1.02475e-11 (rank : 98)	NC score	0.918183 (rank : 54)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	308
SwissProt Accessions	P50222, O75263, Q9UPL6	Gene names	MEOX2, GAX, MOX2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox).

MEOX2_MOUSE
θ value	1.02475e-11 (rank : 99)	NC score	0.918455 (rank : 53)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	308
SwissProt Accessions	P32443, Q544T6	Gene names	Meox2, Gax, Mox-2, Mox2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2).

NKX32_HUMAN
θ value	1.02475e-11 (rank : 100)	NC score	0.898564 (rank : 95)
Query Neighborhood Hits	493	Target Neighborhood Hits	323	Shared Neighborhood Hits	303
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

NKX32_MOUSE
θ value	1.02475e-11 (rank : 101)	NC score	0.896802 (rank : 105)
Query Neighborhood Hits	493	Target Neighborhood Hits	326	Shared Neighborhood Hits	303
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

VAX1_HUMAN
θ value	1.02475e-11 (rank : 102)	NC score	0.897548 (rank : 100)
Query Neighborhood Hits	493	Target Neighborhood Hits	355	Shared Neighborhood Hits	311
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX1_MOUSE
θ value	1.02475e-11 (rank : 103)	NC score	0.896990 (rank : 104)
Query Neighborhood Hits	493	Target Neighborhood Hits	351	Shared Neighborhood Hits	309
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX2_HUMAN
θ value	1.02475e-11 (rank : 104)	NC score	0.898080 (rank : 96)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	304
SwissProt Accessions	Q9UIW0	Gene names	VAX2
Domain Architecture
Description	Ventral anterior homeobox 2.

VAX2_MOUSE
θ value	1.02475e-11 (rank : 105)	NC score	0.897418 (rank : 101)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	304
SwissProt Accessions	Q9WTP9	Gene names	Vax2, Vex
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 2 (Ventral retina homeodomain protein).

HXC12_MOUSE
θ value	1.74796e-11 (rank : 106)	NC score	0.896089 (rank : 108)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	299
SwissProt Accessions	Q8K5B8	Gene names	Hoxc12, Hox-3.8, Hoxc-12
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C12 (Hox-3.8).

NKX31_MOUSE
θ value	3.89403e-11 (rank : 107)	NC score	0.897602 (rank : 99)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	305
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

HME2_HUMAN
θ value	5.08577e-11 (rank : 108)	NC score	0.896541 (rank : 106)
Query Neighborhood Hits	493	Target Neighborhood Hits	355	Shared Neighborhood Hits	315
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HME2_MOUSE
θ value	5.08577e-11 (rank : 109)	NC score	0.895168 (rank : 109)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	312
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

EMX1_HUMAN
θ value	6.64225e-11 (rank : 110)	NC score	0.894308 (rank : 112)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	313
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

NKX31_HUMAN
θ value	6.64225e-11 (rank : 111)	NC score	0.901628 (rank : 87)
Query Neighborhood Hits	493	Target Neighborhood Hits	331	Shared Neighborhood Hits	302
SwissProt Accessions	Q99801, O15465, Q9H2P4, Q9H2P5, Q9H2P6, Q9H2P7, Q9HBG0	Gene names	NKX3-1, NKX3.1, NKX3A
Domain Architecture
Description	Homeobox protein Nkx-3.1.

HME1_HUMAN
θ value	8.67504e-11 (rank : 112)	NC score	0.891224 (rank : 116)
Query Neighborhood Hits	493	Target Neighborhood Hits	384	Shared Neighborhood Hits	313
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HME1_MOUSE
θ value	8.67504e-11 (rank : 113)	NC score	0.890771 (rank : 117)
Query Neighborhood Hits	493	Target Neighborhood Hits	397	Shared Neighborhood Hits	312
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

MSX3_MOUSE
θ value	8.67504e-11 (rank : 114)	NC score	0.903165 (rank : 81)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	304
SwissProt Accessions	P70354, P70246, Q03360, Q80W10	Gene names	Msx3, Msx-3
Domain Architecture
Description	Homeobox protein MSX-3.

BARX2_HUMAN
θ value	1.133e-10 (rank : 115)	NC score	0.897061 (rank : 103)
Query Neighborhood Hits	493	Target Neighborhood Hits	387	Shared Neighborhood Hits	307
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

BARX2_MOUSE
θ value	1.133e-10 (rank : 116)	NC score	0.901072 (rank : 89)
Query Neighborhood Hits	493	Target Neighborhood Hits	335	Shared Neighborhood Hits	303
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

NKX12_MOUSE
θ value	1.133e-10 (rank : 117)	NC score	0.915624 (rank : 59)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	304
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

ARX_HUMAN
θ value	1.47974e-10 (rank : 118)	NC score	0.832652 (rank : 176)
Query Neighborhood Hits	493	Target Neighborhood Hits	401	Shared Neighborhood Hits	311
SwissProt Accessions	Q96QS3	Gene names	ARX
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

ARX_MOUSE
θ value	1.47974e-10 (rank : 119)	NC score	0.830864 (rank : 180)
Query Neighborhood Hits	493	Target Neighborhood Hits	398	Shared Neighborhood Hits	308
SwissProt Accessions	O35085, Q9QYT4	Gene names	Arx
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

DLX3_HUMAN
θ value	1.47974e-10 (rank : 120)	NC score	0.865436 (rank : 160)
Query Neighborhood Hits	493	Target Neighborhood Hits	369	Shared Neighborhood Hits	323
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX5_MOUSE
θ value	1.47974e-10 (rank : 121)	NC score	0.859300 (rank : 165)
Query Neighborhood Hits	493	Target Neighborhood Hits	434	Shared Neighborhood Hits	333
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX5_HUMAN
θ value	1.9326e-10 (rank : 122)	NC score	0.859741 (rank : 164)
Query Neighborhood Hits	493	Target Neighborhood Hits	405	Shared Neighborhood Hits	326
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

BARH1_HUMAN
θ value	2.52405e-10 (rank : 123)	NC score	0.882157 (rank : 128)
Query Neighborhood Hits	493	Target Neighborhood Hits	373	Shared Neighborhood Hits	317
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARH1_MOUSE
θ value	2.52405e-10 (rank : 124)	NC score	0.881428 (rank : 129)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	313
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

MSX2_MOUSE
θ value	2.52405e-10 (rank : 125)	NC score	0.880732 (rank : 131)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	306
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

DLX3_MOUSE
θ value	3.29651e-10 (rank : 126)	NC score	0.866218 (rank : 158)
Query Neighborhood Hits	493	Target Neighborhood Hits	367	Shared Neighborhood Hits	320
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

HHEX_HUMAN
θ value	3.29651e-10 (rank : 127)	NC score	0.894554 (rank : 111)
Query Neighborhood Hits	493	Target Neighborhood Hits	358	Shared Neighborhood Hits	305
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HHEX_MOUSE
θ value	3.29651e-10 (rank : 128)	NC score	0.896278 (rank : 107)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	307
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

NKX22_HUMAN
θ value	3.29651e-10 (rank : 129)	NC score	0.863256 (rank : 161)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	312
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX28_HUMAN
θ value	3.29651e-10 (rank : 130)	NC score	0.883220 (rank : 125)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	316
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

DLX2_HUMAN
θ value	4.30538e-10 (rank : 131)	NC score	0.873411 (rank : 139)
Query Neighborhood Hits	493	Target Neighborhood Hits	355	Shared Neighborhood Hits	316
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

MSX2_HUMAN
θ value	4.30538e-10 (rank : 132)	NC score	0.882609 (rank : 127)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	306
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

DLX1_HUMAN
θ value	5.62301e-10 (rank : 133)	NC score	0.873085 (rank : 141)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	316
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_MOUSE
θ value	5.62301e-10 (rank : 134)	NC score	0.872965 (rank : 142)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	316
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX2_MOUSE
θ value	5.62301e-10 (rank : 135)	NC score	0.873237 (rank : 140)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	316
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

MSX1_HUMAN
θ value	5.62301e-10 (rank : 136)	NC score	0.885060 (rank : 124)
Query Neighborhood Hits	493	Target Neighborhood Hits	374	Shared Neighborhood Hits	320
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

MSX1_MOUSE
θ value	5.62301e-10 (rank : 137)	NC score	0.885995 (rank : 122)
Query Neighborhood Hits	493	Target Neighborhood Hits	322	Shared Neighborhood Hits	306
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

NKX23_MOUSE
θ value	5.62301e-10 (rank : 138)	NC score	0.867296 (rank : 155)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	310
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

NKX28_MOUSE
θ value	5.62301e-10 (rank : 139)	NC score	0.877273 (rank : 132)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	314
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

EMX2_HUMAN
θ value	9.59137e-10 (rank : 140)	NC score	0.888636 (rank : 119)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	315
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_MOUSE
θ value	9.59137e-10 (rank : 141)	NC score	0.888225 (rank : 120)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	315
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HLX1_HUMAN
θ value	9.59137e-10 (rank : 142)	NC score	0.873790 (rank : 136)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	301
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

HXA13_HUMAN
θ value	9.59137e-10 (rank : 143)	NC score	0.867047 (rank : 157)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	310
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

HXA13_MOUSE
θ value	9.59137e-10 (rank : 144)	NC score	0.868023 (rank : 153)
Query Neighborhood Hits	493	Target Neighborhood Hits	351	Shared Neighborhood Hits	310
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

NKX22_MOUSE
θ value	9.59137e-10 (rank : 145)	NC score	0.860392 (rank : 163)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	309
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX23_HUMAN
θ value	9.59137e-10 (rank : 146)	NC score	0.869352 (rank : 151)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	313
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

BARH2_HUMAN
θ value	1.25267e-09 (rank : 147)	NC score	0.872840 (rank : 143)
Query Neighborhood Hits	493	Target Neighborhood Hits	419	Shared Neighborhood Hits	315
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

BARH2_MOUSE
θ value	1.25267e-09 (rank : 148)	NC score	0.873756 (rank : 137)
Query Neighborhood Hits	493	Target Neighborhood Hits	397	Shared Neighborhood Hits	316
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

HMX2_MOUSE
θ value	1.25267e-09 (rank : 149)	NC score	0.889408 (rank : 118)
Query Neighborhood Hits	493	Target Neighborhood Hits	354	Shared Neighborhood Hits	316
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

NKX24_MOUSE
θ value	1.25267e-09 (rank : 150)	NC score	0.862378 (rank : 162)
Query Neighborhood Hits	493	Target Neighborhood Hits	356	Shared Neighborhood Hits	312
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

OTX1_HUMAN
θ value	1.25267e-09 (rank : 151)	NC score	0.778650 (rank : 212)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	307
SwissProt Accessions	P32242, Q53TG6	Gene names	OTX1
Domain Architecture
Description	Homeobox protein OTX1.

PITX3_HUMAN
θ value	1.25267e-09 (rank : 152)	NC score	0.831427 (rank : 179)
Query Neighborhood Hits	493	Target Neighborhood Hits	366	Shared Neighborhood Hits	313
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

TITF1_HUMAN
θ value	1.25267e-09 (rank : 153)	NC score	0.854433 (rank : 168)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	310
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

TITF1_MOUSE
θ value	1.25267e-09 (rank : 154)	NC score	0.856661 (rank : 167)
Query Neighborhood Hits	493	Target Neighborhood Hits	335	Shared Neighborhood Hits	310
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

TLX1_HUMAN
θ value	1.25267e-09 (rank : 155)	NC score	0.873459 (rank : 138)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	317
SwissProt Accessions	P31314, O75699, Q9HCA0	Gene names	TLX1, HOX11, TCL3
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (TCL-3 proto-oncogene).

TLX1_MOUSE
θ value	1.25267e-09 (rank : 156)	NC score	0.871642 (rank : 144)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	317
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

DLX4_HUMAN
θ value	1.63604e-09 (rank : 157)	NC score	0.870680 (rank : 147)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	306
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

DLX4_MOUSE
θ value	1.63604e-09 (rank : 158)	NC score	0.870097 (rank : 148)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	307
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

NKX24_HUMAN
θ value	1.63604e-09 (rank : 159)	NC score	0.858070 (rank : 166)
Query Neighborhood Hits	493	Target Neighborhood Hits	366	Shared Neighborhood Hits	312
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX25_HUMAN
θ value	1.63604e-09 (rank : 160)	NC score	0.869683 (rank : 150)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	312
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX25_MOUSE
θ value	1.63604e-09 (rank : 161)	NC score	0.867403 (rank : 154)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	314
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

PAX7_HUMAN
θ value	1.63604e-09 (rank : 162)	NC score	0.707580 (rank : 231)
Query Neighborhood Hits	493	Target Neighborhood Hits	456	Shared Neighborhood Hits	334
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PITX1_MOUSE
θ value	2.13673e-09 (rank : 163)	NC score	0.825436 (rank : 187)
Query Neighborhood Hits	493	Target Neighborhood Hits	362	Shared Neighborhood Hits	317
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

PITX2_MOUSE
θ value	2.13673e-09 (rank : 164)	NC score	0.824126 (rank : 188)
Query Neighborhood Hits	493	Target Neighborhood Hits	383	Shared Neighborhood Hits	316
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

PITX3_MOUSE
θ value	2.13673e-09 (rank : 165)	NC score	0.833761 (rank : 175)
Query Neighborhood Hits	493	Target Neighborhood Hits	380	Shared Neighborhood Hits	314
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

NKX26_MOUSE
θ value	2.79066e-09 (rank : 166)	NC score	0.871442 (rank : 145)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	308
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

HXC13_HUMAN
θ value	3.64472e-09 (rank : 167)	NC score	0.853826 (rank : 169)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	308
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
θ value	3.64472e-09 (rank : 168)	NC score	0.853692 (rank : 170)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	308
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

OTX1_MOUSE
θ value	3.64472e-09 (rank : 169)	NC score	0.773086 (rank : 217)
Query Neighborhood Hits	493	Target Neighborhood Hits	372	Shared Neighborhood Hits	308
SwissProt Accessions	P80205	Gene names	Otx1, Otx-1
Domain Architecture
Description	Homeobox protein OTX1.

PITX2_HUMAN
θ value	3.64472e-09 (rank : 170)	NC score	0.823276 (rank : 189)
Query Neighborhood Hits	493	Target Neighborhood Hits	381	Shared Neighborhood Hits	314
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

HLX1_MOUSE
θ value	4.76016e-09 (rank : 171)	NC score	0.871194 (rank : 146)
Query Neighborhood Hits	493	Target Neighborhood Hits	362	Shared Neighborhood Hits	297
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

HMX3_MOUSE
θ value	4.76016e-09 (rank : 172)	NC score	0.886175 (rank : 121)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	310
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

HXB13_HUMAN
θ value	4.76016e-09 (rank : 173)	NC score	0.850732 (rank : 172)
Query Neighborhood Hits	493	Target Neighborhood Hits	377	Shared Neighborhood Hits	321
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

PITX1_HUMAN
θ value	4.76016e-09 (rank : 174)	NC score	0.827525 (rank : 183)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	315
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

TLX3_HUMAN
θ value	4.76016e-09 (rank : 175)	NC score	0.867192 (rank : 156)
Query Neighborhood Hits	493	Target Neighborhood Hits	403	Shared Neighborhood Hits	350
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

TLX3_MOUSE
θ value	4.76016e-09 (rank : 176)	NC score	0.866146 (rank : 159)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	315
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

HXB13_MOUSE
θ value	6.21693e-09 (rank : 177)	NC score	0.851930 (rank : 171)
Query Neighborhood Hits	493	Target Neighborhood Hits	384	Shared Neighborhood Hits	318
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXD13_HUMAN
θ value	6.21693e-09 (rank : 178)	NC score	0.850372 (rank : 173)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	303
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
θ value	6.21693e-09 (rank : 179)	NC score	0.850134 (rank : 174)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	303
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

DLX6_HUMAN
θ value	8.11959e-09 (rank : 180)	NC score	0.875747 (rank : 134)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	316
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

PAX7_MOUSE
θ value	8.11959e-09 (rank : 181)	NC score	0.705711 (rank : 232)
Query Neighborhood Hits	493	Target Neighborhood Hits	422	Shared Neighborhood Hits	326
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PROP1_MOUSE
θ value	1.06045e-08 (rank : 182)	NC score	0.785773 (rank : 208)
Query Neighborhood Hits	493	Target Neighborhood Hits	361	Shared Neighborhood Hits	311
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

LBX1_MOUSE
θ value	1.80886e-08 (rank : 183)	NC score	0.885599 (rank : 123)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	309
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

DBX1_MOUSE
θ value	2.36244e-08 (rank : 184)	NC score	0.883046 (rank : 126)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	307
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

NKX61_HUMAN
θ value	2.36244e-08 (rank : 185)	NC score	0.876365 (rank : 133)
Query Neighborhood Hits	493	Target Neighborhood Hits	431	Shared Neighborhood Hits	319
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

NKX61_MOUSE
θ value	2.36244e-08 (rank : 186)	NC score	0.874889 (rank : 135)
Query Neighborhood Hits	493	Target Neighborhood Hits	439	Shared Neighborhood Hits	318
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

RX_HUMAN
θ value	3.08544e-08 (rank : 187)	NC score	0.827164 (rank : 184)
Query Neighborhood Hits	493	Target Neighborhood Hits	423	Shared Neighborhood Hits	320
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

PHX2A_HUMAN
θ value	4.0297e-08 (rank : 188)	NC score	0.821922 (rank : 190)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	309
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

PHX2A_MOUSE
θ value	4.0297e-08 (rank : 189)	NC score	0.820197 (rank : 191)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	306
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

PHX2B_HUMAN
θ value	4.0297e-08 (rank : 190)	NC score	0.805135 (rank : 193)
Query Neighborhood Hits	493	Target Neighborhood Hits	407	Shared Neighborhood Hits	327
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
θ value	4.0297e-08 (rank : 191)	NC score	0.805135 (rank : 194)
Query Neighborhood Hits	493	Target Neighborhood Hits	407	Shared Neighborhood Hits	327
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

ESX1L_HUMAN
θ value	5.26297e-08 (rank : 192)	NC score	0.830381 (rank : 181)
Query Neighborhood Hits	493	Target Neighborhood Hits	498	Shared Neighborhood Hits	313
SwissProt Accessions	Q8N693, Q7Z6K7	Gene names	ESX1L, ESX1R
Domain Architecture
Description	Extraembryonic, spermatogenesis, homeobox 1-like protein.

LBX1_HUMAN
θ value	8.97725e-08 (rank : 193)	NC score	0.881122 (rank : 130)
Query Neighborhood Hits	493	Target Neighborhood Hits	357	Shared Neighborhood Hits	312
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

OTP_MOUSE
θ value	8.97725e-08 (rank : 194)	NC score	0.826734 (rank : 185)
Query Neighborhood Hits	493	Target Neighborhood Hits	387	Shared Neighborhood Hits	321
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

TLX2_HUMAN
θ value	8.97725e-08 (rank : 195)	NC score	0.869202 (rank : 152)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	317
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

TLX2_MOUSE
θ value	8.97725e-08 (rank : 196)	NC score	0.869849 (rank : 149)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	309
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

PRRX2_HUMAN
θ value	1.17247e-07 (rank : 197)	NC score	0.787797 (rank : 207)
Query Neighborhood Hits	493	Target Neighborhood Hits	348	Shared Neighborhood Hits	311
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

PRRX2_MOUSE
θ value	1.99992e-07 (rank : 198)	NC score	0.782771 (rank : 209)
Query Neighborhood Hits	493	Target Neighborhood Hits	351	Shared Neighborhood Hits	312
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

RX_MOUSE
θ value	2.61198e-07 (rank : 199)	NC score	0.827924 (rank : 182)
Query Neighborhood Hits	493	Target Neighborhood Hits	429	Shared Neighborhood Hits	323
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

ALX4_HUMAN
θ value	3.41135e-07 (rank : 200)	NC score	0.800667 (rank : 198)
Query Neighborhood Hits	493	Target Neighborhood Hits	394	Shared Neighborhood Hits	322
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

ALX4_MOUSE
θ value	3.41135e-07 (rank : 201)	NC score	0.802544 (rank : 195)
Query Neighborhood Hits	493	Target Neighborhood Hits	369	Shared Neighborhood Hits	319
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

CART1_HUMAN
θ value	4.45536e-07 (rank : 202)	NC score	0.789190 (rank : 205)
Query Neighborhood Hits	493	Target Neighborhood Hits	348	Shared Neighborhood Hits	315
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

CART1_MOUSE
θ value	4.45536e-07 (rank : 203)	NC score	0.789043 (rank : 206)
Query Neighborhood Hits	493	Target Neighborhood Hits	344	Shared Neighborhood Hits	315
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

PROP1_HUMAN
θ value	4.45536e-07 (rank : 204)	NC score	0.797894 (rank : 201)
Query Neighborhood Hits	493	Target Neighborhood Hits	354	Shared Neighborhood Hits	312
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PRRX1_HUMAN
θ value	9.92553e-07 (rank : 205)	NC score	0.768890 (rank : 221)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	312
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

PRRX1_MOUSE
θ value	9.92553e-07 (rank : 206)	NC score	0.769044 (rank : 220)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	312
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

HESX1_HUMAN
θ value	1.29631e-06 (rank : 207)	NC score	0.832093 (rank : 178)
Query Neighborhood Hits	493	Target Neighborhood Hits	326	Shared Neighborhood Hits	302
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

HESX1_MOUSE
θ value	1.29631e-06 (rank : 208)	NC score	0.832643 (rank : 177)
Query Neighborhood Hits	493	Target Neighborhood Hits	331	Shared Neighborhood Hits	301
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

ALX3_MOUSE
θ value	2.21117e-06 (rank : 209)	NC score	0.780038 (rank : 211)
Query Neighborhood Hits	493	Target Neighborhood Hits	386	Shared Neighborhood Hits	325
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

CHX10_HUMAN
θ value	2.88788e-06 (rank : 210)	NC score	0.775941 (rank : 215)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	307
SwissProt Accessions	P58304	Gene names	CHX10, VSX2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

CHX10_MOUSE
θ value	2.88788e-06 (rank : 211)	NC score	0.776257 (rank : 214)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	307
SwissProt Accessions	Q61412	Gene names	Chx10, Vsx2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

PAX4_MOUSE
θ value	2.88788e-06 (rank : 212)	NC score	0.709249 (rank : 229)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	318
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

PAX4_HUMAN
θ value	4.92598e-06 (rank : 213)	NC score	0.711787 (rank : 228)
Query Neighborhood Hits	493	Target Neighborhood Hits	367	Shared Neighborhood Hits	319
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

SHOX2_HUMAN
θ value	4.92598e-06 (rank : 214)	NC score	0.801337 (rank : 196)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	303
SwissProt Accessions	O60902, O60465, O60467, O60903	Gene names	SHOX2, OG12X, SHOT
Domain Architecture
Description	Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X).

SHOX2_MOUSE
θ value	4.92598e-06 (rank : 215)	NC score	0.801197 (rank : 197)
Query Neighborhood Hits	493	Target Neighborhood Hits	348	Shared Neighborhood Hits	303
SwissProt Accessions	P70390, P70369	Gene names	Shox2, Og12x, Prx3
Domain Architecture
Description	Short stature homeobox protein 2 (Homeobox protein Og12X) (OG-12) (Paired family homeodomain protein Prx3).

SHOX_HUMAN
θ value	4.92598e-06 (rank : 216)	NC score	0.799439 (rank : 200)
Query Neighborhood Hits	493	Target Neighborhood Hits	363	Shared Neighborhood Hits	303
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

VSX1_HUMAN
θ value	4.92598e-06 (rank : 217)	NC score	0.767496 (rank : 222)
Query Neighborhood Hits	493	Target Neighborhood Hits	344	Shared Neighborhood Hits	310
SwissProt Accessions	Q9NZR4, Q5TF40, Q5TF41, Q9HCU3, Q9NU27	Gene names	VSX1, RINX
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

VSX1_MOUSE
θ value	4.92598e-06 (rank : 218)	NC score	0.769395 (rank : 219)
Query Neighborhood Hits	493	Target Neighborhood Hits	356	Shared Neighborhood Hits	305
SwissProt Accessions	Q91V10	Gene names	Vsx1, Rinx
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

PAX6_HUMAN
θ value	6.43352e-06 (rank : 219)	NC score	0.691888 (rank : 235)
Query Neighborhood Hits	493	Target Neighborhood Hits	383	Shared Neighborhood Hits	315
SwissProt Accessions	P26367, Q6N006, Q99413	Gene names	PAX6, AN2
Domain Architecture
Description	Paired box protein Pax-6 (Oculorhombin) (Aniridia type II protein).

PAX6_MOUSE
θ value	6.43352e-06 (rank : 220)	NC score	0.691888 (rank : 236)
Query Neighborhood Hits	493	Target Neighborhood Hits	383	Shared Neighborhood Hits	315
SwissProt Accessions	P63015, P32117, P70601, Q62222, Q64037, Q8CEI5, Q8VDB5, Q921Q8	Gene names	Pax6, Pax-6, Sey
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-6 (Oculorhombin).

CRX_HUMAN
θ value	1.09739e-05 (rank : 221)	NC score	0.778439 (rank : 213)
Query Neighborhood Hits	493	Target Neighborhood Hits	360	Shared Neighborhood Hits	311
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

ALX3_HUMAN
θ value	1.43324e-05 (rank : 222)	NC score	0.780260 (rank : 210)
Query Neighborhood Hits	493	Target Neighborhood Hits	380	Shared Neighborhood Hits	321
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

PRRXL_MOUSE
θ value	1.43324e-05 (rank : 223)	NC score	0.800559 (rank : 199)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	314
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

GSCL_HUMAN
θ value	3.19293e-05 (rank : 224)	NC score	0.795285 (rank : 202)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	304
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

LMX1A_MOUSE
θ value	3.19293e-05 (rank : 225)	NC score	0.483406 (rank : 245)
Query Neighborhood Hits	493	Target Neighborhood Hits	405	Shared Neighborhood Hits	298
SwissProt Accessions	Q9JKU8	Gene names	Lmx1a
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

OTX2_HUMAN
θ value	3.19293e-05 (rank : 226)	NC score	0.750112 (rank : 224)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	304
SwissProt Accessions	P32243, Q6GTV3, Q9HAW3, Q9P2R1	Gene names	OTX2
Domain Architecture
Description	Homeobox protein OTX2.

OTX2_MOUSE
θ value	3.19293e-05 (rank : 227)	NC score	0.750587 (rank : 223)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	306
SwissProt Accessions	P80206	Gene names	Otx2, Otx-2
Domain Architecture
Description	Homeobox protein OTX2.

PEPP2_HUMAN
θ value	3.19293e-05 (rank : 228)	NC score	0.825807 (rank : 186)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	288
SwissProt Accessions	Q9BQY4, Q9BR00	Gene names	PEPP2, THG1
Domain Architecture
Description	Paired-like homeobox protein PEPP-2 (Testis homeobox gene 1).

PEPP1_HUMAN
θ value	4.1701e-05 (rank : 229)	NC score	0.817218 (rank : 192)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	304
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

LMX1A_HUMAN
θ value	5.44631e-05 (rank : 230)	NC score	0.484878 (rank : 243)
Query Neighborhood Hits	493	Target Neighborhood Hits	406	Shared Neighborhood Hits	299
SwissProt Accessions	Q8TE12, Q8TE11	Gene names	LMX1A
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

ATBF1_MOUSE
θ value	7.1131e-05 (rank : 231)	NC score	0.383026 (rank : 269)
Query Neighborhood Hits	493	Target Neighborhood Hits	1841	Shared Neighborhood Hits	344
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

CRX_MOUSE
θ value	7.1131e-05 (rank : 232)	NC score	0.772667 (rank : 218)
Query Neighborhood Hits	493	Target Neighborhood Hits	359	Shared Neighborhood Hits	307
SwissProt Accessions	O54751	Gene names	Crx
Domain Architecture
Description	Cone-rod homeobox protein.

LHX61_HUMAN
θ value	7.1131e-05 (rank : 233)	NC score	0.486280 (rank : 241)
Query Neighborhood Hits	493	Target Neighborhood Hits	412	Shared Neighborhood Hits	286
SwissProt Accessions	Q9UPM6, Q5T7S8, Q9NTK3, Q9UPM5	Gene names	LHX6, LHX6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1 (Lhx6).

ATBF1_HUMAN
θ value	9.29e-05 (rank : 234)	NC score	0.385336 (rank : 267)
Query Neighborhood Hits	493	Target Neighborhood Hits	1547	Shared Neighborhood Hits	326
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

GSC_HUMAN
θ value	9.29e-05 (rank : 235)	NC score	0.791394 (rank : 203)
Query Neighborhood Hits	493	Target Neighborhood Hits	369	Shared Neighborhood Hits	322
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

GSC_MOUSE
θ value	9.29e-05 (rank : 236)	NC score	0.790548 (rank : 204)
Query Neighborhood Hits	493	Target Neighborhood Hits	368	Shared Neighborhood Hits	319
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

LHX2_HUMAN
θ value	9.29e-05 (rank : 237)	NC score	0.491558 (rank : 238)
Query Neighborhood Hits	493	Target Neighborhood Hits	432	Shared Neighborhood Hits	292
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

LHX2_MOUSE
θ value	9.29e-05 (rank : 238)	NC score	0.489874 (rank : 239)
Query Neighborhood Hits	493	Target Neighborhood Hits	431	Shared Neighborhood Hits	292
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

DUX4_HUMAN
θ value	0.000121331 (rank : 239)	NC score	0.708071 (rank : 230)
Query Neighborhood Hits	493	Target Neighborhood Hits	403	Shared Neighborhood Hits	316
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

LHX3_HUMAN
θ value	0.00020696 (rank : 240)	NC score	0.488149 (rank : 240)
Query Neighborhood Hits	493	Target Neighborhood Hits	474	Shared Neighborhood Hits	322
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

LHX3_MOUSE
θ value	0.00020696 (rank : 241)	NC score	0.483837 (rank : 244)
Query Neighborhood Hits	493	Target Neighborhood Hits	451	Shared Neighborhood Hits	311
SwissProt Accessions	P50481, Q61800, Q61801	Gene names	Lhx3, Lim-3, Lim3, Plim
Domain Architecture
Description	LIM/homeobox protein Lhx3 (Homeobox protein LIM-3) (Homeobox protein P-LIM) (LIM homeobox protein 3).

LHX61_MOUSE
θ value	0.000270298 (rank : 242)	NC score	0.453712 (rank : 257)
Query Neighborhood Hits	493	Target Neighborhood Hits	396	Shared Neighborhood Hits	271
SwissProt Accessions	Q9R1R0, Q9R1R1	Gene names	Lhx6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1.

DUX3_HUMAN
θ value	0.00035302 (rank : 243)	NC score	0.721808 (rank : 227)
Query Neighborhood Hits	493	Target Neighborhood Hits	312	Shared Neighborhood Hits	288
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

PEF1_HUMAN
θ value	0.00035302 (rank : 244)	NC score	0.041293 (rank : 388)
Query Neighborhood Hits	493	Target Neighborhood Hits	135	Shared Neighborhood Hits	29
SwissProt Accessions	Q9UBV8	Gene names	PEF1, ABP32
Domain Architecture	No domain graphic available
Description	Peflin (PEF protein with a long N-terminal hydrophobic domain) (Penta- EF hand domain-containing protein 1).

GSCL_MOUSE
θ value	0.000461057 (rank : 245)	NC score	0.775054 (rank : 216)
Query Neighborhood Hits	493	Target Neighborhood Hits	339	Shared Neighborhood Hits	306
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

LHX6_MOUSE
θ value	0.000461057 (rank : 246)	NC score	0.485787 (rank : 242)
Query Neighborhood Hits	493	Target Neighborhood Hits	399	Shared Neighborhood Hits	285
SwissProt Accessions	O88706	Gene names	Lhx6
Domain Architecture
Description	LIM/homeobox protein Lhx6.

DUX1_HUMAN
θ value	0.000602161 (rank : 247)	NC score	0.728195 (rank : 225)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	302
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX5_HUMAN
θ value	0.000602161 (rank : 248)	NC score	0.723658 (rank : 226)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	302
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

LHX4_HUMAN
θ value	0.000786445 (rank : 249)	NC score	0.479748 (rank : 247)
Query Neighborhood Hits	493	Target Neighborhood Hits	455	Shared Neighborhood Hits	316
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX4_MOUSE
θ value	0.000786445 (rank : 250)	NC score	0.479887 (rank : 246)
Query Neighborhood Hits	493	Target Neighborhood Hits	457	Shared Neighborhood Hits	316
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX9_HUMAN
θ value	0.000786445 (rank : 251)	NC score	0.471347 (rank : 251)
Query Neighborhood Hits	493	Target Neighborhood Hits	444	Shared Neighborhood Hits	293
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX9_MOUSE
θ value	0.000786445 (rank : 252)	NC score	0.471776 (rank : 250)
Query Neighborhood Hits	493	Target Neighborhood Hits	445	Shared Neighborhood Hits	293
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX8_MOUSE
θ value	0.00228821 (rank : 253)	NC score	0.459399 (rank : 256)
Query Neighborhood Hits	493	Target Neighborhood Hits	406	Shared Neighborhood Hits	287
SwissProt Accessions	O35652, O70163, O88707	Gene names	Lhx8, Lhx7
Domain Architecture
Description	LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3).

LMX1B_HUMAN
θ value	0.00228821 (rank : 254)	NC score	0.459917 (rank : 255)
Query Neighborhood Hits	493	Target Neighborhood Hits	404	Shared Neighborhood Hits	297
SwissProt Accessions	O60663, O75463	Gene names	LMX1B
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LMX1B_MOUSE
θ value	0.00228821 (rank : 255)	NC score	0.460075 (rank : 254)
Query Neighborhood Hits	493	Target Neighborhood Hits	394	Shared Neighborhood Hits	296
SwissProt Accessions	O88609	Gene names	Lmx1b
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

WDR33_HUMAN
θ value	0.00665767 (rank : 256)	NC score	0.017491 (rank : 470)
Query Neighborhood Hits	493	Target Neighborhood Hits	638	Shared Neighborhood Hits	54
SwissProt Accessions	Q9C0J8	Gene names	WDR33, WDC146
Domain Architecture
Description	WD repeat protein 33 (WD repeat protein WDC146).

ZFHX2_HUMAN
θ value	0.00665767 (rank : 257)	NC score	0.534922 (rank : 237)
Query Neighborhood Hits	493	Target Neighborhood Hits	1178	Shared Neighborhood Hits	339
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

ANXA7_MOUSE
θ value	0.0113563 (rank : 258)	NC score	0.026256 (rank : 439)
Query Neighborhood Hits	493	Target Neighborhood Hits	142	Shared Neighborhood Hits	32
SwissProt Accessions	Q07076	Gene names	Anxa7, Anx7
Domain Architecture
Description	Annexin A7 (Annexin VII) (Synexin).

IQEC2_HUMAN
θ value	0.0148317 (rank : 259)	NC score	0.035558 (rank : 403)
Query Neighborhood Hits	493	Target Neighborhood Hits	403	Shared Neighborhood Hits	29
SwissProt Accessions	Q5JU85, O60275	Gene names	IQSEC2, KIAA0522
Domain Architecture	No domain graphic available
Description	IQ motif and Sec7 domain-containing protein 2.

IQEC2_MOUSE
θ value	0.0148317 (rank : 260)	NC score	0.034787 (rank : 407)
Query Neighborhood Hits	493	Target Neighborhood Hits	417	Shared Neighborhood Hits	28
SwissProt Accessions	Q5DU25	Gene names	Iqsec2, Kiaa0522
Domain Architecture	No domain graphic available
Description	IQ motif and Sec7 domain-containing protein 2.

TFE2_HUMAN
θ value	0.0148317 (rank : 261)	NC score	0.028591 (rank : 432)
Query Neighborhood Hits	493	Target Neighborhood Hits	161	Shared Neighborhood Hits	29
SwissProt Accessions	P15923, P15883, Q14208, Q14635, Q14636, Q9UPI9	Gene names	TCF3, E2A, ITF1
Domain Architecture
Description	Transcription factor E2-alpha (Immunoglobulin enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Immunoglobulin transcription factor 1) (Transcription factor ITF-1) (Kappa-E2-binding factor).

LHX1_MOUSE
θ value	0.0193708 (rank : 262)	NC score	0.467075 (rank : 252)
Query Neighborhood Hits	493	Target Neighborhood Hits	453	Shared Neighborhood Hits	305
SwissProt Accessions	P63006, P36199	Gene names	Lhx1, Lim-1, Lim1
Domain Architecture	No domain graphic available
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

HNRL1_MOUSE
θ value	0.0252991 (rank : 263)	NC score	0.035386 (rank : 405)
Query Neighborhood Hits	493	Target Neighborhood Hits	200	Shared Neighborhood Hits	30
SwissProt Accessions	Q8VDM6, Q3U201, Q3UPB0, Q6AZA7, Q8BY45, Q8K365	Gene names	Hnrpul1
Domain Architecture	No domain graphic available
Description	Heterogeneous nuclear ribonucleoprotein U-like protein 1.

JUNB_HUMAN
θ value	0.0252991 (rank : 264)	NC score	0.033017 (rank : 413)
Query Neighborhood Hits	493	Target Neighborhood Hits	97	Shared Neighborhood Hits	4
SwissProt Accessions	P17275, Q96GH3	Gene names	JUNB
Domain Architecture
Description	Transcription factor jun-B.

PLS1_MOUSE
θ value	0.0252991 (rank : 265)	NC score	0.017364 (rank : 471)
Query Neighborhood Hits	493	Target Neighborhood Hits	58	Shared Neighborhood Hits	10
SwissProt Accessions	Q9JJ00, O54730, O54731, Q9D1F8	Gene names	Plscr1, Tra1b, Tras1
Domain Architecture
Description	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (TRA1) (NOR1).

PRB3_HUMAN
θ value	0.0252991 (rank : 266)	NC score	0.035004 (rank : 406)
Query Neighborhood Hits	493	Target Neighborhood Hits	318	Shared Neighborhood Hits	40
SwissProt Accessions	Q04118, Q15188, Q7M4M9	Gene names	PRB3
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 3 precursor (Parotid salivary glycoprotein G1) (Proline-rich protein G1).

ISL2_HUMAN
θ value	0.0330416 (rank : 267)	NC score	0.386951 (rank : 264)
Query Neighborhood Hits	493	Target Neighborhood Hits	435	Shared Neighborhood Hits	299
SwissProt Accessions	Q96A47	Gene names	ISL2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

ISL2_MOUSE
θ value	0.0330416 (rank : 268)	NC score	0.384999 (rank : 268)
Query Neighborhood Hits	493	Target Neighborhood Hits	426	Shared Neighborhood Hits	291
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

WASF2_HUMAN
θ value	0.0330416 (rank : 269)	NC score	0.041448 (rank : 387)
Query Neighborhood Hits	493	Target Neighborhood Hits	280	Shared Neighborhood Hits	31
SwissProt Accessions	Q9Y6W5, O60794, Q9UDY7	Gene names	WASF2, WAVE2
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 2 (WASP-family protein member 2) (Protein WAVE-2) (Verprolin homology domain-containing protein 2).

PO5F1_MOUSE
θ value	0.0431538 (rank : 270)	NC score	0.256195 (rank : 307)
Query Neighborhood Hits	493	Target Neighborhood Hits	305	Shared Neighborhood Hits	261
SwissProt Accessions	P20263, Q63843	Gene names	Pou5f1, Oct-3, Oct-4, Otf-3, Otf3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3).

SOX15_HUMAN
θ value	0.0431538 (rank : 271)	NC score	0.024601 (rank : 449)
Query Neighborhood Hits	493	Target Neighborhood Hits	134	Shared Neighborhood Hits	21
SwissProt Accessions	O60248, P35717, Q9Y6W7	Gene names	SOX15, SOX12, SOX20, SOX26, SOX27
Domain Architecture
Description	SOX-15 protein (SOX-20 protein) (SOX-12 protein).

WASF2_MOUSE
θ value	0.0431538 (rank : 272)	NC score	0.041494 (rank : 386)
Query Neighborhood Hits	493	Target Neighborhood Hits	315	Shared Neighborhood Hits	35
SwissProt Accessions	Q8BH43	Gene names	Wasf2, Wave2
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 2 (WASP-family protein member 2) (Protein WAVE-2).

PO2F1_HUMAN
θ value	0.0563607 (rank : 273)	NC score	0.388955 (rank : 263)
Query Neighborhood Hits	493	Target Neighborhood Hits	426	Shared Neighborhood Hits	300
SwissProt Accessions	P14859, Q5TBT7, Q6PK46, Q8NEU9, Q9BPV1	Gene names	POU2F1, OCT1, OTF1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

PRB4S_HUMAN
θ value	0.0563607 (rank : 274)	NC score	0.030913 (rank : 422)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	37
SwissProt Accessions	P10163, P02813	Gene names	PRB4
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 4 allele S precursor (Salivary proline-rich protein Po) (Parotid o protein) [Contains: Protein N1; Glycosylated protein A].

SHAN1_HUMAN
θ value	0.0563607 (rank : 275)	NC score	0.011977 (rank : 500)
Query Neighborhood Hits	493	Target Neighborhood Hits	1041	Shared Neighborhood Hits	59
SwissProt Accessions	Q9Y566, Q9NYW9	Gene names	SHANK1
Domain Architecture
Description	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP).

SIX4_HUMAN
θ value	0.0563607 (rank : 276)	NC score	0.281762 (rank : 296)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	260
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX4_MOUSE
θ value	0.0563607 (rank : 277)	NC score	0.297993 (rank : 292)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	261
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

IRX5_HUMAN
θ value	0.0736092 (rank : 278)	NC score	0.249550 (rank : 309)
Query Neighborhood Hits	493	Target Neighborhood Hits	362	Shared Neighborhood Hits	212
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

LEF1_HUMAN
θ value	0.0736092 (rank : 279)	NC score	0.027214 (rank : 437)
Query Neighborhood Hits	493	Target Neighborhood Hits	150	Shared Neighborhood Hits	24
SwissProt Accessions	Q9UJU2, Q9HAZ0	Gene names	LEF1
Domain Architecture
Description	Lymphoid enhancer-binding factor 1 (LEF-1) (T cell-specific transcription factor 1-alpha) (TCF1-alpha).

LHX1_HUMAN
θ value	0.0736092 (rank : 280)	NC score	0.466280 (rank : 253)
Query Neighborhood Hits	493	Target Neighborhood Hits	453	Shared Neighborhood Hits	305
SwissProt Accessions	P48742, Q3MIW0	Gene names	LHX1, LIM1
Domain Architecture
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

SF01_HUMAN
θ value	0.0736092 (rank : 281)	NC score	0.038175 (rank : 398)
Query Neighborhood Hits	493	Target Neighborhood Hits	287	Shared Neighborhood Hits	28
SwissProt Accessions	Q15637, Q14818, Q14819, Q15913, Q8IY00, Q92744, Q92745, Q969H7, Q9BW01, Q9UEI0	Gene names	SF1, ZFM1, ZNF162
Domain Architecture
Description	Splicing factor 1 (Zinc finger protein 162) (Transcription factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP).

FMN2_MOUSE
θ value	0.0961366 (rank : 282)	NC score	0.024613 (rank : 448)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	36
SwissProt Accessions	Q9JL04	Gene names	Fmn2
Domain Architecture
Description	Formin-2.

LEF1_MOUSE
θ value	0.0961366 (rank : 283)	NC score	0.027670 (rank : 434)
Query Neighborhood Hits	493	Target Neighborhood Hits	161	Shared Neighborhood Hits	29
SwissProt Accessions	P27782	Gene names	Lef1, Lef-1
Domain Architecture
Description	Lymphoid enhancer-binding factor 1 (LEF-1).

LHX5_MOUSE
θ value	0.0961366 (rank : 284)	NC score	0.472581 (rank : 249)
Query Neighborhood Hits	493	Target Neighborhood Hits	456	Shared Neighborhood Hits	306
SwissProt Accessions	P61375, P50459	Gene names	Lhx5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

CO1A1_HUMAN
θ value	0.125558 (rank : 285)	NC score	0.034046 (rank : 408)
Query Neighborhood Hits	493	Target Neighborhood Hits	475	Shared Neighborhood Hits	69
SwissProt Accessions	P02452, P78441, Q13896, Q13902, Q13903, Q14037, Q14992, Q15176, Q15201, Q16050, Q7KZ30, Q7KZ34, Q8IVI5, Q9UML6, Q9UMM7	Gene names	COL1A1
Domain Architecture
Description	Collagen alpha-1(I) chain precursor.

CO1A1_MOUSE
θ value	0.125558 (rank : 286)	NC score	0.032831 (rank : 414)
Query Neighborhood Hits	493	Target Neighborhood Hits	457	Shared Neighborhood Hits	63
SwissProt Accessions	P11087, Q53WT0, Q60635, Q61367, Q61427, Q63919, Q6PCL3, Q810J9	Gene names	Col1a1, Cola1
Domain Architecture
Description	Collagen alpha-1(I) chain precursor.

ISL1_HUMAN
θ value	0.125558 (rank : 287)	NC score	0.377501 (rank : 270)
Query Neighborhood Hits	493	Target Neighborhood Hits	421	Shared Neighborhood Hits	296
SwissProt Accessions	P61371, P20663, P47894	Gene names	ISL1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL1_MOUSE
θ value	0.125558 (rank : 288)	NC score	0.377501 (rank : 271)
Query Neighborhood Hits	493	Target Neighborhood Hits	421	Shared Neighborhood Hits	296
SwissProt Accessions	P61372, P20663, P47894, Q812D8	Gene names	Isl1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

PO3F3_HUMAN
θ value	0.125558 (rank : 289)	NC score	0.274573 (rank : 299)
Query Neighborhood Hits	493	Target Neighborhood Hits	311	Shared Neighborhood Hits	260
SwissProt Accessions	P20264, P78379	Gene names	POU3F3, BRN1, OTF8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F3_MOUSE
θ value	0.125558 (rank : 290)	NC score	0.275025 (rank : 298)
Query Neighborhood Hits	493	Target Neighborhood Hits	308	Shared Neighborhood Hits	260
SwissProt Accessions	P31361	Gene names	Pou3f3, Brn-1, Brn1, Otf8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PRP1_HUMAN
θ value	0.125558 (rank : 291)	NC score	0.027578 (rank : 436)
Query Neighborhood Hits	493	Target Neighborhood Hits	385	Shared Neighborhood Hits	41
SwissProt Accessions	P04280, Q08805, Q15186, Q15187, Q15214, Q15215, Q16038	Gene names	PRB1
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 1 precursor (Salivary proline-rich protein) [Contains: Basic peptide IB-6; Peptide P-H].

PTPRN_HUMAN
θ value	0.125558 (rank : 292)	NC score	0.005446 (rank : 525)
Query Neighborhood Hits	493	Target Neighborhood Hits	156	Shared Neighborhood Hits	8
SwissProt Accessions	Q16849, Q08319	Gene names	PTPRN, ICA3, ICA512
Domain Architecture
Description	Receptor-type tyrosine-protein phosphatase-like N precursor (R-PTP-N) (PTP IA-2) (Islet cell antigen 512) (ICA 512) (Islet cell autoantigen 3).

SF3B4_HUMAN
θ value	0.125558 (rank : 293)	NC score	0.017910 (rank : 468)
Query Neighborhood Hits	493	Target Neighborhood Hits	445	Shared Neighborhood Hits	46
SwissProt Accessions	Q15427	Gene names	SF3B4, SAP49
Domain Architecture
Description	Splicing factor 3B subunit 4 (Spliceosome-associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit).

SMR3A_HUMAN
θ value	0.125558 (rank : 294)	NC score	0.062007 (rank : 363)
Query Neighborhood Hits	493	Target Neighborhood Hits	93	Shared Neighborhood Hits	9
SwissProt Accessions	Q99954	Gene names	SMR3A, PBI, PROL5
Domain Architecture	No domain graphic available
Description	Submaxillary gland androgen-regulated protein 3 homolog A precursor (Proline-rich protein 5) (Proline-rich protein PBI).

SOX15_MOUSE
θ value	0.125558 (rank : 295)	NC score	0.019229 (rank : 466)
Query Neighborhood Hits	493	Target Neighborhood Hits	100	Shared Neighborhood Hits	14
SwissProt Accessions	P43267, O70204, P70418, Q62246, Q91V00, Q91V43, Q920T1, Q9JLG2	Gene names	Sox15, Sox-15
Domain Architecture
Description	SOX-15 protein.

HRG_HUMAN
θ value	0.163984 (rank : 296)	NC score	0.039198 (rank : 394)
Query Neighborhood Hits	493	Target Neighborhood Hits	43	Shared Neighborhood Hits	4
SwissProt Accessions	P04196	Gene names	HRG
Domain Architecture
Description	Histidine-rich glycoprotein precursor (Histidine-proline-rich glycoprotein) (HPRG).

OBSCN_HUMAN
θ value	0.163984 (rank : 297)	NC score	-0.009089 (rank : 550)
Query Neighborhood Hits	493	Target Neighborhood Hits	1931	Shared Neighborhood Hits	89
SwissProt Accessions	Q5VST9, Q2A664, Q5T7G8, Q5T7G9, Q5VSU2, Q86YC7, Q8NHN0, Q8NHN1, Q8NHN2, Q8NHN4, Q8NHN5, Q8NHN6, Q8NHN7, Q8NHN8, Q8NHN9, Q96AA2, Q9HCD3, Q9HCL6	Gene names	OBSCN, KIAA1556, KIAA1639
Domain Architecture	No domain graphic available
Description	Obscurin (Obscurin-myosin light chain kinase) (Obscurin-MLCK) (Obscurin-RhoGEF).

PO2F2_MOUSE
θ value	0.163984 (rank : 298)	NC score	0.386868 (rank : 265)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	291
SwissProt Accessions	Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q61995, Q61996, Q64245	Gene names	Pou2f2, Oct2, Otf2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

C1QC_HUMAN
θ value	0.21417 (rank : 299)	NC score	0.028513 (rank : 433)
Query Neighborhood Hits	493	Target Neighborhood Hits	124	Shared Neighborhood Hits	30
SwissProt Accessions	P02747, Q7Z502, Q96DL2, Q96H05	Gene names	C1QC, C1QG
Domain Architecture
Description	Complement C1q subcomponent subunit C precursor.

CO5A1_HUMAN
θ value	0.21417 (rank : 300)	NC score	0.039924 (rank : 391)
Query Neighborhood Hits	493	Target Neighborhood Hits	434	Shared Neighborhood Hits	65
SwissProt Accessions	P20908, Q15094, Q5SUX4	Gene names	COL5A1
Domain Architecture
Description	Collagen alpha-1(V) chain precursor.

CO5A1_MOUSE
θ value	0.21417 (rank : 301)	NC score	0.039395 (rank : 393)
Query Neighborhood Hits	493	Target Neighborhood Hits	419	Shared Neighborhood Hits	61
SwissProt Accessions	O88207	Gene names	Col5a1
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(V) chain precursor.

LHX5_HUMAN
θ value	0.21417 (rank : 302)	NC score	0.472787 (rank : 248)
Query Neighborhood Hits	493	Target Neighborhood Hits	453	Shared Neighborhood Hits	305
SwissProt Accessions	Q9H2C1	Gene names	LHX5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

PO6F2_HUMAN
θ value	0.21417 (rank : 303)	NC score	0.440421 (rank : 259)
Query Neighborhood Hits	493	Target Neighborhood Hits	618	Shared Neighborhood Hits	298
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

PO6F2_MOUSE
θ value	0.21417 (rank : 304)	NC score	0.442060 (rank : 258)
Query Neighborhood Hits	493	Target Neighborhood Hits	639	Shared Neighborhood Hits	307
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

WASF4_HUMAN
θ value	0.21417 (rank : 305)	NC score	0.039110 (rank : 395)
Query Neighborhood Hits	493	Target Neighborhood Hits	282	Shared Neighborhood Hits	32
SwissProt Accessions	Q8IV90	Gene names	WASF4, SCAR2
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 4 (WASP-family protein member 4).

EWS_HUMAN
θ value	0.279714 (rank : 306)	NC score	0.029750 (rank : 428)
Query Neighborhood Hits	493	Target Neighborhood Hits	249	Shared Neighborhood Hits	39
SwissProt Accessions	Q01844, Q92635	Gene names	EWSR1, EWS
Domain Architecture
Description	RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma breakpoint region 1 protein).

EWS_MOUSE
θ value	0.279714 (rank : 307)	NC score	0.035622 (rank : 402)
Query Neighborhood Hits	493	Target Neighborhood Hits	271	Shared Neighborhood Hits	46
SwissProt Accessions	Q61545	Gene names	Ewsr1, Ews, Ewsh
Domain Architecture
Description	RNA-binding protein EWS.

FOXL2_MOUSE
θ value	0.279714 (rank : 308)	NC score	0.008419 (rank : 515)
Query Neighborhood Hits	493	Target Neighborhood Hits	151	Shared Neighborhood Hits	13
SwissProt Accessions	O88470, Q8K3X9	Gene names	Foxl2, Pfrk
Domain Architecture	No domain graphic available
Description	Forkhead box protein L2 (Pituitary forkhead factor) (P-Frk).

IRX6_MOUSE
θ value	0.279714 (rank : 309)	NC score	0.301202 (rank : 291)
Query Neighborhood Hits	493	Target Neighborhood Hits	256	Shared Neighborhood Hits	215
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

JUNB_MOUSE
θ value	0.279714 (rank : 310)	NC score	0.031030 (rank : 421)
Query Neighborhood Hits	493	Target Neighborhood Hits	116	Shared Neighborhood Hits	9
SwissProt Accessions	P09450, Q8C2G9	Gene names	Junb, Jun-b
Domain Architecture
Description	Transcription factor jun-B.

PDC6I_HUMAN
θ value	0.279714 (rank : 311)	NC score	0.022315 (rank : 455)
Query Neighborhood Hits	493	Target Neighborhood Hits	278	Shared Neighborhood Hits	26
SwissProt Accessions	Q8WUM4, Q9BX86, Q9NUN0, Q9P2H2, Q9UKL5	Gene names	PDCD6IP, AIP1, ALIX, KIAA1375
Domain Architecture
Description	Programmed cell death 6-interacting protein (PDCD6-interacting protein) (ALG-2-interacting protein 1) (Hp95).

PO2F1_MOUSE
θ value	0.279714 (rank : 312)	NC score	0.370416 (rank : 273)
Query Neighborhood Hits	493	Target Neighborhood Hits	408	Shared Neighborhood Hits	292
SwissProt Accessions	P25425, Q61994, Q63891, Q6Y681, Q7TSD0, Q8BT04, Q8K570, Q99JH0, Q9WTZ4, Q9WTZ5, Q9WTZ6	Gene names	Pou2f1, Oct-1, Otf-1, Otf1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

RIN3_MOUSE
θ value	0.279714 (rank : 313)	NC score	0.023491 (rank : 451)
Query Neighborhood Hits	493	Target Neighborhood Hits	239	Shared Neighborhood Hits	24
SwissProt Accessions	P59729	Gene names	Rin3
Domain Architecture
Description	Ras and Rab interactor 3 (Ras interaction/interference protein 3).

SF01_MOUSE
θ value	0.279714 (rank : 314)	NC score	0.035489 (rank : 404)
Query Neighborhood Hits	493	Target Neighborhood Hits	240	Shared Neighborhood Hits	21
SwissProt Accessions	Q64213, O08817, P70167, Q61454, Q921Z4	Gene names	Sf1, Zfm1, Zfp162
Domain Architecture
Description	Splicing factor 1 (Zinc finger protein 162) (Transcription factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point- binding protein mBBP) (BBP) (CW17).

ARI1A_HUMAN
θ value	0.365318 (rank : 315)	NC score	0.036528 (rank : 401)
Query Neighborhood Hits	493	Target Neighborhood Hits	787	Shared Neighborhood Hits	110
SwissProt Accessions	O14497, Q53FK9, Q5T0W1, Q5T0W2, Q5T0W3, Q8NFD6, Q96T89, Q9BY33, Q9HBJ5, Q9UPZ1	Gene names	ARID1A, C1orf4, OSA1, SMARCF1
Domain Architecture
Description	AT-rich interactive domain-containing protein 1A (ARID domain- containing protein 1A) (SWI/SNF-related, matrix-associated, actin- dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like protein) (Osa homolog 1) (hOSA1) (hELD) (BRG1-associated factor 250) (BAF250) (BRG1-associated factor 250a) (BAF250A).

COBA1_HUMAN
θ value	0.365318 (rank : 316)	NC score	0.038393 (rank : 397)
Query Neighborhood Hits	493	Target Neighborhood Hits	491	Shared Neighborhood Hits	81
SwissProt Accessions	P12107, Q14034, Q9UIT4, Q9UIT5, Q9UIT6	Gene names	COL11A1
Domain Architecture
Description	Collagen alpha-1(XI) chain precursor.

HNRL1_HUMAN
θ value	0.365318 (rank : 317)	NC score	0.030434 (rank : 424)
Query Neighborhood Hits	493	Target Neighborhood Hits	173	Shared Neighborhood Hits	27
SwissProt Accessions	Q9BUJ2, O76022, Q6ZSZ0, Q7L8P4, Q8N6Z4, Q96G37, Q9HAL3, Q9UG75	Gene names	HNRPUL1, E1BAP5
Domain Architecture	No domain graphic available
Description	Heterogeneous nuclear ribonucleoprotein U-like protein 1 (Adenovirus early region 1B-associated protein 5) (E1B-55 kDa-associated protein 5) (E1B-AP5).

IRX5_MOUSE
θ value	0.365318 (rank : 318)	NC score	0.237837 (rank : 316)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	205
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

PO4F2_HUMAN
θ value	0.365318 (rank : 319)	NC score	0.318355 (rank : 283)
Query Neighborhood Hits	493	Target Neighborhood Hits	310	Shared Neighborhood Hits	280
SwissProt Accessions	Q12837, Q13883, Q14987	Gene names	POU4F2, BRN3B
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B).

PO4F2_MOUSE
θ value	0.365318 (rank : 320)	NC score	0.319274 (rank : 282)
Query Neighborhood Hits	493	Target Neighborhood Hits	312	Shared Neighborhood Hits	280
SwissProt Accessions	Q63934, Q63954	Gene names	Pou4f2, Brn3b
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2).

SYN2_HUMAN
θ value	0.365318 (rank : 321)	NC score	0.016258 (rank : 475)
Query Neighborhood Hits	493	Target Neighborhood Hits	213	Shared Neighborhood Hits	16
SwissProt Accessions	Q92777	Gene names	SYN2
Domain Architecture
Description	Synapsin-2 (Synapsin II).

WBP2_MOUSE
θ value	0.365318 (rank : 322)	NC score	0.049684 (rank : 382)
Query Neighborhood Hits	493	Target Neighborhood Hits	51	Shared Neighborhood Hits	11
SwissProt Accessions	P97765	Gene names	Wbp2
Domain Architecture
Description	WW domain-binding protein 2 (WBP-2).

ANX11_MOUSE
θ value	0.47712 (rank : 323)	NC score	0.015645 (rank : 478)
Query Neighborhood Hits	493	Target Neighborhood Hits	200	Shared Neighborhood Hits	31
SwissProt Accessions	P97384	Gene names	Anxa11, Anx11
Domain Architecture
Description	Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50) (CAP-50).

ATN1_HUMAN
θ value	0.47712 (rank : 324)	NC score	0.032153 (rank : 416)
Query Neighborhood Hits	493	Target Neighborhood Hits	676	Shared Neighborhood Hits	62
SwissProt Accessions	P54259, Q99495, Q99621, Q9UEK7	Gene names	ATN1, DRPLA
Domain Architecture
Description	Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein).

EMID1_HUMAN
θ value	0.47712 (rank : 325)	NC score	0.026850 (rank : 438)
Query Neighborhood Hits	493	Target Neighborhood Hits	215	Shared Neighborhood Hits	41
SwissProt Accessions	Q96A84, Q6ICG1, Q86SS7	Gene names	EMID1, EMU1
Domain Architecture	No domain graphic available
Description	EMI domain-containing protein 1 precursor (Protein Emu1) (Emilin and multimerin domain-containing protein 1).

PO2F2_HUMAN
θ value	0.47712 (rank : 326)	NC score	0.386396 (rank : 266)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	292
SwissProt Accessions	P09086, Q16648, Q9BRS4	Gene names	POU2F2, OCT2, OTF2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

SC24D_HUMAN
θ value	0.47712 (rank : 327)	NC score	0.021000 (rank : 457)
Query Neighborhood Hits	493	Target Neighborhood Hits	173	Shared Neighborhood Hits	28
SwissProt Accessions	O94855	Gene names	SEC24D, KIAA0755
Domain Architecture
Description	Protein transport protein Sec24D (SEC24-related protein D).

WBP2_HUMAN
θ value	0.47712 (rank : 328)	NC score	0.048369 (rank : 383)
Query Neighborhood Hits	493	Target Neighborhood Hits	55	Shared Neighborhood Hits	10
SwissProt Accessions	Q969T9, O95638	Gene names	WBP2
Domain Architecture
Description	WW domain-binding protein 2 (WBP-2).

CN032_MOUSE
θ value	0.62314 (rank : 329)	NC score	0.027644 (rank : 435)
Query Neighborhood Hits	493	Target Neighborhood Hits	233	Shared Neighborhood Hits	31
SwissProt Accessions	Q8BH93, Q3TF12, Q3TGL0, Q8CC90	Gene names
Domain Architecture	No domain graphic available
Description	Protein C14orf32 homolog.

CO3A1_HUMAN
θ value	0.62314 (rank : 330)	NC score	0.032110 (rank : 417)
Query Neighborhood Hits	493	Target Neighborhood Hits	452	Shared Neighborhood Hits	60
SwissProt Accessions	P02461, Q15112, Q16403, Q6LDB3, Q6LDJ2, Q6LDJ3, Q7KZ56	Gene names	COL3A1
Domain Architecture
Description	Collagen alpha-1(III) chain precursor.

IF4G3_MOUSE
θ value	0.62314 (rank : 331)	NC score	0.014540 (rank : 485)
Query Neighborhood Hits	493	Target Neighborhood Hits	279	Shared Neighborhood Hits	16
SwissProt Accessions	Q80XI3, Q80Y69, Q8BJ68, Q8BQF3, Q8C6Q3, Q8CIH0	Gene names	Eif4g3
Domain Architecture
Description	Eukaryotic translation initiation factor 4 gamma 3 (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII).

PO5F1_HUMAN
θ value	0.62314 (rank : 332)	NC score	0.240308 (rank : 313)
Query Neighborhood Hits	493	Target Neighborhood Hits	321	Shared Neighborhood Hits	260
SwissProt Accessions	Q01860, P31359, Q15167, Q15168, Q16422	Gene names	POU5F1, OCT3, OCT4, OTF3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4).

TAF4_HUMAN
θ value	0.62314 (rank : 333)	NC score	0.025209 (rank : 443)
Query Neighborhood Hits	493	Target Neighborhood Hits	687	Shared Neighborhood Hits	51
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

TGON2_MOUSE
θ value	0.62314 (rank : 334)	NC score	0.020323 (rank : 462)
Query Neighborhood Hits	493	Target Neighborhood Hits	277	Shared Neighborhood Hits	19
SwissProt Accessions	Q62314	Gene names	Tgoln2, Ttgn2
Domain Architecture	No domain graphic available
Description	Trans-Golgi network integral membrane protein 2 precursor (TGN38B).

TNC6B_HUMAN
θ value	0.62314 (rank : 335)	NC score	0.020349 (rank : 461)
Query Neighborhood Hits	493	Target Neighborhood Hits	256	Shared Neighborhood Hits	32
SwissProt Accessions	Q9UPQ9, Q5TH52, Q8TBX2	Gene names	TNRC6B, KIAA1093
Domain Architecture
Description	Trinucleotide repeat-containing 6B protein.

ZMYM3_MOUSE
θ value	0.62314 (rank : 336)	NC score	0.013598 (rank : 491)
Query Neighborhood Hits	493	Target Neighborhood Hits	177	Shared Neighborhood Hits	9
SwissProt Accessions	Q9JLM4, Q80U17	Gene names	Zmym3, Kiaa0385, Zfp261, Znf261
Domain Architecture	No domain graphic available
Description	Zinc finger MYM-type protein 3 (Zinc finger protein 261) (DXHXS6673E protein).

CO4A1_HUMAN
θ value	0.813845 (rank : 337)	NC score	0.033897 (rank : 411)
Query Neighborhood Hits	493	Target Neighborhood Hits	425	Shared Neighborhood Hits	82
SwissProt Accessions	P02462	Gene names	COL4A1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

COBA1_MOUSE
θ value	0.813845 (rank : 338)	NC score	0.037887 (rank : 399)
Query Neighborhood Hits	493	Target Neighborhood Hits	487	Shared Neighborhood Hits	80
SwissProt Accessions	Q61245, Q64047	Gene names	Col11a1
Domain Architecture
Description	Collagen alpha-1(XI) chain precursor.

IRX3_HUMAN
θ value	0.813845 (rank : 339)	NC score	0.261631 (rank : 305)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	197
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_MOUSE
θ value	0.813845 (rank : 340)	NC score	0.263795 (rank : 302)
Query Neighborhood Hits	493	Target Neighborhood Hits	303	Shared Neighborhood Hits	196
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

K0460_HUMAN
θ value	0.813845 (rank : 341)	NC score	0.016102 (rank : 477)
Query Neighborhood Hits	493	Target Neighborhood Hits	357	Shared Neighborhood Hits	23
SwissProt Accessions	Q5VT52, O75048, Q5VT53, Q6MZL4, Q86XD2	Gene names	KIAA0460
Domain Architecture	No domain graphic available
Description	Protein KIAA0460.

PBX3_HUMAN
θ value	0.813845 (rank : 342)	NC score	0.329181 (rank : 281)
Query Neighborhood Hits	493	Target Neighborhood Hits	306	Shared Neighborhood Hits	264
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_MOUSE
θ value	0.813845 (rank : 343)	NC score	0.329220 (rank : 280)
Query Neighborhood Hits	493	Target Neighborhood Hits	306	Shared Neighborhood Hits	264
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PIT1_HUMAN
θ value	0.813845 (rank : 344)	NC score	0.334205 (rank : 277)
Query Neighborhood Hits	493	Target Neighborhood Hits	292	Shared Neighborhood Hits	264
SwissProt Accessions	P28069, O75757, Q15132, Q15133, Q9UEL3	Gene names	POU1F1, GHF1, PIT1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PIT1_MOUSE
θ value	0.813845 (rank : 345)	NC score	0.329322 (rank : 279)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	278
SwissProt Accessions	Q00286	Gene names	Pou1f1, Pit-1, Pit1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PO6F1_HUMAN
θ value	0.813845 (rank : 346)	NC score	0.417823 (rank : 261)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	296
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

PO6F1_MOUSE
θ value	0.813845 (rank : 347)	NC score	0.403970 (rank : 262)
Query Neighborhood Hits	493	Target Neighborhood Hits	581	Shared Neighborhood Hits	315
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

BSN_MOUSE
θ value	1.06291 (rank : 348)	NC score	0.034023 (rank : 409)
Query Neighborhood Hits	493	Target Neighborhood Hits	2057	Shared Neighborhood Hits	169
SwissProt Accessions	O88737, Q6ZQB5	Gene names	Bsn, Kiaa0434
Domain Architecture	No domain graphic available
Description	Protein bassoon.

CO4A5_HUMAN
θ value	1.06291 (rank : 349)	NC score	0.025752 (rank : 440)
Query Neighborhood Hits	493	Target Neighborhood Hits	383	Shared Neighborhood Hits	57
SwissProt Accessions	P29400, Q16006, Q16126, Q6LD84	Gene names	COL4A5
Domain Architecture
Description	Collagen alpha-5(IV) chain precursor.

FIGN_HUMAN
θ value	1.06291 (rank : 350)	NC score	0.013846 (rank : 490)
Query Neighborhood Hits	493	Target Neighborhood Hits	176	Shared Neighborhood Hits	17
SwissProt Accessions	Q5HY92, Q9H6M5, Q9NVZ9	Gene names	FIGN
Domain Architecture	No domain graphic available
Description	Fidgetin.

FOXL2_HUMAN
θ value	1.06291 (rank : 351)	NC score	0.006496 (rank : 523)
Query Neighborhood Hits	493	Target Neighborhood Hits	142	Shared Neighborhood Hits	9
SwissProt Accessions	P58012, Q4ZGJ3	Gene names	FOXL2
Domain Architecture
Description	Forkhead box protein L2.

HCN2_HUMAN
θ value	1.06291 (rank : 352)	NC score	0.007357 (rank : 520)
Query Neighborhood Hits	493	Target Neighborhood Hits	369	Shared Neighborhood Hits	43
SwissProt Accessions	Q9UL51, O60742, O60743, O75267, Q9UBS2	Gene names	HCN2, BCNG2
Domain Architecture
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 (Brain cyclic nucleotide-gated channel 2) (BCNG-2).

IRX4_HUMAN
θ value	1.06291 (rank : 353)	NC score	0.283815 (rank : 295)
Query Neighborhood Hits	493	Target Neighborhood Hits	276	Shared Neighborhood Hits	233
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX4_MOUSE
θ value	1.06291 (rank : 354)	NC score	0.286935 (rank : 294)
Query Neighborhood Hits	493	Target Neighborhood Hits	286	Shared Neighborhood Hits	232
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

NCOR2_HUMAN
θ value	1.06291 (rank : 355)	NC score	0.014618 (rank : 484)
Query Neighborhood Hits	493	Target Neighborhood Hits	870	Shared Neighborhood Hits	59
SwissProt Accessions	Q9Y618, O00613, O15416, Q13354, Q9Y5U0	Gene names	NCOR2, CTG26
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC) (CTG repeat protein 26) (SMAP270).

PBX4_MOUSE
θ value	1.06291 (rank : 356)	NC score	0.332040 (rank : 278)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	264
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

SPT5H_MOUSE
θ value	1.06291 (rank : 357)	NC score	0.040478 (rank : 390)
Query Neighborhood Hits	493	Target Neighborhood Hits	437	Shared Neighborhood Hits	69
SwissProt Accessions	O55201, Q3UJ77, Q3UJH1, Q3UKD7, Q3UM54, Q6PB73, Q6PDP0, Q6PFR4	Gene names	Supt5h
Domain Architecture	No domain graphic available
Description	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit).

CEP68_MOUSE
θ value	1.38821 (rank : 358)	NC score	0.011603 (rank : 501)
Query Neighborhood Hits	493	Target Neighborhood Hits	62	Shared Neighborhood Hits	3
SwissProt Accessions	Q8C0D9, Q3US49, Q5SW85, Q8R2V0	Gene names	Cep68
Domain Architecture	No domain graphic available
Description	Centrosomal protein of 68 kDa (Cep68 protein).

CO2A1_HUMAN
θ value	1.38821 (rank : 359)	NC score	0.033670 (rank : 412)
Query Neighborhood Hits	493	Target Neighborhood Hits	486	Shared Neighborhood Hits	86
SwissProt Accessions	P02458, Q12985, Q14009, Q14044, Q14046, Q14056, Q14058, Q16672, Q6LBY1, Q6LBY2, Q6LBY3, Q99227, Q9UE38, Q9UE39, Q9UE40, Q9UE41, Q9UE42, Q9UE43	Gene names	COL2A1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO6A1_HUMAN
θ value	1.38821 (rank : 360)	NC score	0.024986 (rank : 446)
Query Neighborhood Hits	493	Target Neighborhood Hits	264	Shared Neighborhood Hits	49
SwissProt Accessions	P12109, O00117, O00118, Q14040, Q14041, Q16258	Gene names	COL6A1
Domain Architecture
Description	Collagen alpha-1(VI) chain precursor.

CO8A1_MOUSE
θ value	1.38821 (rank : 361)	NC score	0.023214 (rank : 452)
Query Neighborhood Hits	493	Target Neighborhood Hits	251	Shared Neighborhood Hits	45
SwissProt Accessions	Q00780, Q9D2V4	Gene names	Col8a1
Domain Architecture
Description	Collagen alpha-1(VIII) chain precursor.

COAA1_MOUSE
θ value	1.38821 (rank : 362)	NC score	0.025525 (rank : 442)
Query Neighborhood Hits	493	Target Neighborhood Hits	286	Shared Neighborhood Hits	57
SwissProt Accessions	Q05306	Gene names	Col10a1
Domain Architecture
Description	Collagen alpha-1(X) chain precursor.

CPSF6_HUMAN
θ value	1.38821 (rank : 363)	NC score	0.020168 (rank : 463)
Query Neighborhood Hits	493	Target Neighborhood Hits	359	Shared Neighborhood Hits	44
SwissProt Accessions	Q16630, Q53ES1, Q9BSJ7, Q9BW18	Gene names	CPSF6, CFIM68
Domain Architecture	No domain graphic available
Description	Cleavage and polyadenylation specificity factor 6 (Cleavage and polyadenylation specificity factor 68 kDa subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor Im 68 kDa subunit) (Protein HPBRII- 4/7).

CPSF6_MOUSE
θ value	1.38821 (rank : 364)	NC score	0.019681 (rank : 464)
Query Neighborhood Hits	493	Target Neighborhood Hits	356	Shared Neighborhood Hits	44
SwissProt Accessions	Q6NVF9, Q8BX86, Q8BXI8	Gene names	Cpsf6
Domain Architecture	No domain graphic available
Description	Cleavage and polyadenylation specificity factor 6.

CS007_HUMAN
θ value	1.38821 (rank : 365)	NC score	0.010252 (rank : 508)
Query Neighborhood Hits	493	Target Neighborhood Hits	401	Shared Neighborhood Hits	30
SwissProt Accessions	Q9UPT8, Q9Y420	Gene names	C19orf7, KIAA1064
Domain Architecture	No domain graphic available
Description	Zinc finger CCCH domain-containing protein C19orf7.

GNAS1_MOUSE
θ value	1.38821 (rank : 366)	NC score	0.021288 (rank : 456)
Query Neighborhood Hits	493	Target Neighborhood Hits	651	Shared Neighborhood Hits	104
SwissProt Accessions	Q6R0H7, Q6R0H4, Q6R0H5, Q6R2J5, Q9JJX0, Q9Z1N8	Gene names	Gnas, Gnas1
Domain Architecture	No domain graphic available
Description	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas (Adenylate cyclase-stimulating G alpha protein) (Extra large alphas protein) (XLalphas).

IRX6_HUMAN
θ value	1.38821 (rank : 367)	NC score	0.291969 (rank : 293)
Query Neighborhood Hits	493	Target Neighborhood Hits	262	Shared Neighborhood Hits	217
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

PBX2_HUMAN
θ value	1.38821 (rank : 368)	NC score	0.348166 (rank : 276)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	283
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX2_MOUSE
θ value	1.38821 (rank : 369)	NC score	0.349871 (rank : 275)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	279
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

PO3F1_MOUSE
θ value	1.38821 (rank : 370)	NC score	0.244298 (rank : 311)
Query Neighborhood Hits	493	Target Neighborhood Hits	261	Shared Neighborhood Hits	234
SwissProt Accessions	P21952	Gene names	Pou3f1, Oct6, Otf-6, Otf6, Scip
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

SPEG_MOUSE
θ value	1.38821 (rank : 371)	NC score	-0.010936 (rank : 551)
Query Neighborhood Hits	493	Target Neighborhood Hits	1959	Shared Neighborhood Hits	82
SwissProt Accessions	Q62407, Q3TPH8, Q6P5V1, Q80TF7, Q80ZN0, Q8BZF4, Q9EQJ5	Gene names	Speg, Apeg1, Kiaa1297
Domain Architecture
Description	Striated muscle-specific serine/threonine protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

COEA1_MOUSE
θ value	1.81305 (rank : 372)	NC score	0.011477 (rank : 503)
Query Neighborhood Hits	493	Target Neighborhood Hits	402	Shared Neighborhood Hits	46
SwissProt Accessions	Q80X19, Q8C6X3, Q9WV05	Gene names	Col14a1
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(XIV) chain precursor.

COIA1_HUMAN
θ value	1.81305 (rank : 373)	NC score	0.025105 (rank : 444)
Query Neighborhood Hits	493	Target Neighborhood Hits	447	Shared Neighborhood Hits	72
SwissProt Accessions	P39060, Q9UK38, Q9Y6Q7, Q9Y6Q8	Gene names	COL18A1
Domain Architecture
Description	Collagen alpha-1(XVIII) chain precursor [Contains: Endostatin].

EYA2_MOUSE
θ value	1.81305 (rank : 374)	NC score	0.008109 (rank : 517)
Query Neighborhood Hits	493	Target Neighborhood Hits	43	Shared Neighborhood Hits	6
SwissProt Accessions	O08575, P97925	Gene names	Eya2, Eab1
Domain Architecture
Description	Eyes absent homolog 2 (EC 3.1.3.48).

ILF3_HUMAN
θ value	1.81305 (rank : 375)	NC score	0.008845 (rank : 512)
Query Neighborhood Hits	493	Target Neighborhood Hits	68	Shared Neighborhood Hits	6
SwissProt Accessions	Q12906, O43409, Q6P1X1, Q86XY7, Q99544, Q99545, Q9BZH4, Q9BZH5, Q9NQ95, Q9NQ96, Q9NQ97, Q9NQ98, Q9NQ99, Q9NQA0, Q9NQA1, Q9NQA2, Q9NRN2, Q9NRN3, Q9NRN4, Q9UMZ9, Q9UN00, Q9UN84, Q9UNA2	Gene names	ILF3, DRBF, MPHOSPH4, NF90
Domain Architecture
Description	Interleukin enhancer-binding factor 3 (Nuclear factor of activated T- cells 90 kDa) (NF-AT-90) (Double-stranded RNA-binding protein 76) (DRBP76) (Translational control protein 80) (TCP80) (Nuclear factor associated with dsRNA) (NFAR) (M-phase phosphoprotein 4) (MPP4).

MUCDL_HUMAN
θ value	1.81305 (rank : 376)	NC score	0.025537 (rank : 441)
Query Neighborhood Hits	493	Target Neighborhood Hits	777	Shared Neighborhood Hits	99
SwissProt Accessions	Q9HBB8, Q9H746, Q9HAU3, Q9HBB5, Q9HBB6, Q9HBB7, Q9NX86, Q9NXI9	Gene names	MUCDHL
Domain Architecture
Description	Mucin and cadherin-like protein precursor (Mu-protocadherin).

PRP5_HUMAN
θ value	1.81305 (rank : 377)	NC score	0.051932 (rank : 375)
Query Neighborhood Hits	493	Target Neighborhood Hits	108	Shared Neighborhood Hits	24
SwissProt Accessions	P04281	Gene names
Domain Architecture	No domain graphic available
Description	Basic proline-rich peptide IB-1.

RERE_HUMAN
θ value	1.81305 (rank : 378)	NC score	0.028724 (rank : 431)
Query Neighborhood Hits	493	Target Neighborhood Hits	779	Shared Neighborhood Hits	71
SwissProt Accessions	Q9P2R6, O43393, O75046, O75359, Q5VXL9, Q6P6B9, Q9Y2W4	Gene names	RERE, ARG, ARP, ATN1L, KIAA0458
Domain Architecture	No domain graphic available
Description	Arginine-glutamic acid dipeptide repeats protein (Atrophin-1-like protein) (Atrophin-1-related protein).

SOX30_MOUSE
θ value	1.81305 (rank : 379)	NC score	0.017174 (rank : 472)
Query Neighborhood Hits	493	Target Neighborhood Hits	374	Shared Neighborhood Hits	55
SwissProt Accessions	Q8CGW4	Gene names	Sox30
Domain Architecture
Description	Transcription factor SOX-30.

SPT5H_HUMAN
θ value	1.81305 (rank : 380)	NC score	0.039874 (rank : 392)
Query Neighborhood Hits	493	Target Neighborhood Hits	436	Shared Neighborhood Hits	70
SwissProt Accessions	O00267, O43279, Q59G52, Q99639	Gene names	SUPT5H, SPT5, SPT5H
Domain Architecture	No domain graphic available
Description	Transcription elongation factor SPT5 (hSPT5) (DRB sensitivity-inducing factor large subunit) (DSIF large subunit) (DSIF p160) (Tat- cotransactivator 1 protein) (Tat-CT1 protein).

TPOR_HUMAN
θ value	1.81305 (rank : 381)	NC score	0.008107 (rank : 518)
Query Neighborhood Hits	493	Target Neighborhood Hits	70	Shared Neighborhood Hits	3
SwissProt Accessions	P40238	Gene names	MPL, TPOR
Domain Architecture
Description	Thrombopoietin receptor precursor (TPO-R) (Myeloproliferative leukemia protein) (C-mpl) (CD110 antigen).

AUTS2_HUMAN
θ value	2.36792 (rank : 382)	NC score	0.015232 (rank : 481)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	29
SwissProt Accessions	Q8WXX7, Q9Y4F2	Gene names	AUTS2, KIAA0442
Domain Architecture	No domain graphic available
Description	Autism susceptibility gene 2 protein.

CIC_HUMAN
θ value	2.36792 (rank : 383)	NC score	0.029658 (rank : 429)
Query Neighborhood Hits	493	Target Neighborhood Hits	992	Shared Neighborhood Hits	113
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

CO8A2_HUMAN
θ value	2.36792 (rank : 384)	NC score	0.022663 (rank : 453)
Query Neighborhood Hits	493	Target Neighborhood Hits	299	Shared Neighborhood Hits	54
SwissProt Accessions	P25067, Q8TEJ5	Gene names	COL8A2
Domain Architecture
Description	Collagen alpha-2(VIII) chain precursor (Endothelial collagen).

CS007_MOUSE
θ value	2.36792 (rank : 385)	NC score	0.013000 (rank : 497)
Query Neighborhood Hits	493	Target Neighborhood Hits	464	Shared Neighborhood Hits	46
SwissProt Accessions	Q6ZPZ3	Gene names	Kiaa1064
Domain Architecture	No domain graphic available
Description	Zinc finger CCCH domain-containing protein C19orf7 homolog.

ENAH_MOUSE
θ value	2.36792 (rank : 386)	NC score	0.009070 (rank : 511)
Query Neighborhood Hits	493	Target Neighborhood Hits	919	Shared Neighborhood Hits	44
SwissProt Accessions	Q03173, P70430, P70431, P70432, P70433, Q5D053	Gene names	Enah, Mena, Ndpp1
Domain Architecture
Description	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1).

FIGN_MOUSE
θ value	2.36792 (rank : 387)	NC score	0.011545 (rank : 502)
Query Neighborhood Hits	493	Target Neighborhood Hits	165	Shared Neighborhood Hits	20
SwissProt Accessions	Q9ERZ6, Q3TPB0, Q3UP57, Q6PCM0	Gene names	Fign
Domain Architecture	No domain graphic available
Description	Fidgetin.

GLI1_MOUSE
θ value	2.36792 (rank : 388)	NC score	-0.011098 (rank : 552)
Query Neighborhood Hits	493	Target Neighborhood Hits	785	Shared Neighborhood Hits	18
SwissProt Accessions	P47806, Q9QYK1	Gene names	Gli1, Gli
Domain Architecture	No domain graphic available
Description	Zinc finger protein GLI1 (Glioma-associated oncogene homolog).

IRX1_HUMAN
θ value	2.36792 (rank : 389)	NC score	0.243366 (rank : 312)
Query Neighborhood Hits	493	Target Neighborhood Hits	285	Shared Neighborhood Hits	208
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_MOUSE
θ value	2.36792 (rank : 390)	NC score	0.239739 (rank : 315)
Query Neighborhood Hits	493	Target Neighborhood Hits	269	Shared Neighborhood Hits	199
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

LPP_MOUSE
θ value	2.36792 (rank : 391)	NC score	0.040979 (rank : 389)
Query Neighborhood Hits	493	Target Neighborhood Hits	247	Shared Neighborhood Hits	45
SwissProt Accessions	Q8BFW7, Q5U407, Q8BHI1, Q8BKI0, Q8BKN2, Q8BLF4, Q8BLG3, Q8C101	Gene names	Lpp
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner homolog.

PBX1_HUMAN
θ value	2.36792 (rank : 392)	NC score	0.314872 (rank : 285)
Query Neighborhood Hits	493	Target Neighborhood Hits	317	Shared Neighborhood Hits	263
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
θ value	2.36792 (rank : 393)	NC score	0.314872 (rank : 286)
Query Neighborhood Hits	493	Target Neighborhood Hits	317	Shared Neighborhood Hits	263
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PO4F3_HUMAN
θ value	2.36792 (rank : 394)	NC score	0.309978 (rank : 289)
Query Neighborhood Hits	493	Target Neighborhood Hits	307	Shared Neighborhood Hits	277
SwissProt Accessions	Q15319, O60557	Gene names	POU4F3, BRN3C
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F3_MOUSE
θ value	2.36792 (rank : 395)	NC score	0.310520 (rank : 288)
Query Neighborhood Hits	493	Target Neighborhood Hits	311	Shared Neighborhood Hits	278
SwissProt Accessions	Q63955	Gene names	Pou4f3, Brn-3c, Brn3c
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

SIM2_HUMAN
θ value	2.36792 (rank : 396)	NC score	0.004251 (rank : 528)
Query Neighborhood Hits	493	Target Neighborhood Hits	76	Shared Neighborhood Hits	7
SwissProt Accessions	Q14190, O60766, Q15470, Q15471, Q15472, Q15473, Q16532	Gene names	SIM2
Domain Architecture
Description	Single-minded homolog 2.

SIX5_HUMAN
θ value	2.36792 (rank : 397)	NC score	0.230774 (rank : 318)
Query Neighborhood Hits	493	Target Neighborhood Hits	386	Shared Neighborhood Hits	224
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

TFE2_MOUSE
θ value	2.36792 (rank : 398)	NC score	0.014194 (rank : 486)
Query Neighborhood Hits	493	Target Neighborhood Hits	118	Shared Neighborhood Hits	9
SwissProt Accessions	P15806, Q3U153, Q8CAH9, Q8VCY4, Q922S2, Q99MB8, Q9CYJ4	Gene names	Tcf3, Alf2, Me2, Tcfe2a
Domain Architecture	No domain graphic available
Description	Transcription factor E2-alpha (Immunoglobulin enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Transcription factor A1).

TTDN1_MOUSE
θ value	2.36792 (rank : 399)	NC score	0.013595 (rank : 492)
Query Neighborhood Hits	493	Target Neighborhood Hits	26	Shared Neighborhood Hits	6
SwissProt Accessions	Q9D011	Gene names	Ttdn1
Domain Architecture	No domain graphic available
Description	TTD non-photosensitive 1 protein homolog.

YLPM1_HUMAN
θ value	2.36792 (rank : 400)	NC score	0.036595 (rank : 400)
Query Neighborhood Hits	493	Target Neighborhood Hits	670	Shared Neighborhood Hits	69
SwissProt Accessions	P49750, P49752, Q96I64, Q9P1V7	Gene names	YLPM1, C14orf170, ZAP3
Domain Architecture
Description	YLP motif-containing protein 1 (Nuclear protein ZAP3) (ZAP113).

YLPM1_MOUSE
θ value	2.36792 (rank : 401)	NC score	0.029308 (rank : 430)
Query Neighborhood Hits	493	Target Neighborhood Hits	505	Shared Neighborhood Hits	37
SwissProt Accessions	Q9R0I7, Q7TMM4	Gene names	Ylpm1, Zap, Zap3
Domain Architecture	No domain graphic available
Description	YLP motif-containing protein 1 (Nuclear protein ZAP3).

CO2A1_MOUSE
θ value	3.0926 (rank : 402)	NC score	0.033965 (rank : 410)
Query Neighborhood Hits	493	Target Neighborhood Hits	483	Shared Neighborhood Hits	85
SwissProt Accessions	P28481	Gene names	Col2a1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

COBA2_HUMAN
θ value	3.0926 (rank : 403)	NC score	0.032010 (rank : 418)
Query Neighborhood Hits	493	Target Neighborhood Hits	408	Shared Neighborhood Hits	62
SwissProt Accessions	P13942, Q07751, Q13271, Q13272, Q13273, Q99866, Q9UIP9	Gene names	COL11A2
Domain Architecture
Description	Collagen alpha-2(XI) chain precursor.

COBA2_MOUSE
θ value	3.0926 (rank : 404)	NC score	0.038813 (rank : 396)
Query Neighborhood Hits	493	Target Neighborhood Hits	501	Shared Neighborhood Hits	94
SwissProt Accessions	Q64739, Q61432, Q9Z1W0	Gene names	Col11a2
Domain Architecture
Description	Collagen alpha-2(XI) chain precursor.

COEA1_HUMAN
θ value	3.0926 (rank : 405)	NC score	0.013882 (rank : 489)
Query Neighborhood Hits	493	Target Neighborhood Hits	427	Shared Neighborhood Hits	45
SwissProt Accessions	Q05707, O00260, O00261, O00262, Q05708, Q5XJ18, Q96C67	Gene names	COL14A1, UND
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(XIV) chain precursor (Undulin).

DAZP1_HUMAN
θ value	3.0926 (rank : 406)	NC score	0.003313 (rank : 530)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	24
SwissProt Accessions	Q96EP5, Q96MJ3, Q9NRR9	Gene names	DAZAP1
Domain Architecture
Description	DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1).

DAZP1_MOUSE
θ value	3.0926 (rank : 407)	NC score	0.004406 (rank : 527)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	25
SwissProt Accessions	Q9JII5	Gene names	Dazap1
Domain Architecture
Description	DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1).

FMNL_MOUSE
θ value	3.0926 (rank : 408)	NC score	0.008589 (rank : 514)
Query Neighborhood Hits	493	Target Neighborhood Hits	428	Shared Neighborhood Hits	18
SwissProt Accessions	Q9JL26, Q6KAN4, Q9Z2V7	Gene names	Fmnl1, Frl
Domain Architecture	No domain graphic available
Description	Formin-like protein 1 (Formin-related protein).

FOXO1_HUMAN
θ value	3.0926 (rank : 409)	NC score	0.002038 (rank : 534)
Query Neighborhood Hits	493	Target Neighborhood Hits	126	Shared Neighborhood Hits	7
SwissProt Accessions	Q12778, O43523, Q5VYC7, Q6NSK6	Gene names	FOXO1A, FKHR
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

GP108_HUMAN
θ value	3.0926 (rank : 410)	NC score	0.005972 (rank : 524)
Query Neighborhood Hits	493	Target Neighborhood Hits	17	Shared Neighborhood Hits	2
SwissProt Accessions	Q9NPR9	Gene names	GPR108
Domain Architecture	No domain graphic available
Description	Protein GPR108 precursor.

GSCR1_HUMAN
θ value	3.0926 (rank : 411)	NC score	0.024498 (rank : 450)
Query Neighborhood Hits	493	Target Neighborhood Hits	674	Shared Neighborhood Hits	63
SwissProt Accessions	Q9NZM4	Gene names	GLTSCR1
Domain Architecture	No domain graphic available
Description	Glioma tumor suppressor candidate region gene 1 protein.

MAML1_HUMAN
θ value	3.0926 (rank : 412)	NC score	0.016127 (rank : 476)
Query Neighborhood Hits	493	Target Neighborhood Hits	228	Shared Neighborhood Hits	25
SwissProt Accessions	Q92585, Q9NZ12	Gene names	MAML1, KIAA0200
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 1 (Mam-1).

PO2F3_HUMAN
θ value	3.0926 (rank : 413)	NC score	0.369898 (rank : 274)
Query Neighborhood Hits	493	Target Neighborhood Hits	319	Shared Neighborhood Hits	282
SwissProt Accessions	Q9UKI9, Q9UKR7, Q9Y504	Gene names	POU2F3, OTF11, PLA1
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein).

PO2F3_MOUSE
θ value	3.0926 (rank : 414)	NC score	0.373590 (rank : 272)
Query Neighborhood Hits	493	Target Neighborhood Hits	328	Shared Neighborhood Hits	285
SwissProt Accessions	P31362	Gene names	Pou2f3, Epoc1, Oct11, Otf-11, Otf11
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1).

PO3F1_HUMAN
θ value	3.0926 (rank : 415)	NC score	0.239927 (rank : 314)
Query Neighborhood Hits	493	Target Neighborhood Hits	256	Shared Neighborhood Hits	234
SwissProt Accessions	Q03052	Gene names	POU3F1, OCT6, OTF6
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

PO4F1_HUMAN
θ value	3.0926 (rank : 416)	NC score	0.311758 (rank : 287)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	293
SwissProt Accessions	Q01851, Q14986, Q15318	Gene names	POU4F1, BRN3A, RDC1
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1).

PO4F1_MOUSE
θ value	3.0926 (rank : 417)	NC score	0.315305 (rank : 284)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	293
SwissProt Accessions	P17208	Gene names	Pou4f1, Brn-3, Brn3, Brn3a
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0).

SALL3_HUMAN
θ value	3.0926 (rank : 418)	NC score	-0.011359 (rank : 553)
Query Neighborhood Hits	493	Target Neighborhood Hits	1066	Shared Neighborhood Hits	45
SwissProt Accessions	Q9BXA9, Q9UGH1	Gene names	SALL3
Domain Architecture	No domain graphic available
Description	Sal-like protein 3 (Zinc finger protein SALL3) (hSALL3).

SFPQ_HUMAN
θ value	3.0926 (rank : 419)	NC score	0.007638 (rank : 519)
Query Neighborhood Hits	493	Target Neighborhood Hits	986	Shared Neighborhood Hits	56
SwissProt Accessions	P23246, P30808	Gene names	SFPQ, PSF
Domain Architecture
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).

WASF1_MOUSE
θ value	3.0926 (rank : 420)	NC score	0.030561 (rank : 423)
Query Neighborhood Hits	493	Target Neighborhood Hits	261	Shared Neighborhood Hits	21
SwissProt Accessions	Q8R5H6, Q91W51, Q9ERQ9	Gene names	Wasf1, Wave1
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 1 (WASP-family protein member 1) (Protein WAVE-1).

ZHX2_HUMAN
θ value	3.0926 (rank : 421)	NC score	0.141584 (rank : 333)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	171
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ANXA7_HUMAN
θ value	4.03905 (rank : 422)	NC score	0.017713 (rank : 469)
Query Neighborhood Hits	493	Target Neighborhood Hits	168	Shared Neighborhood Hits	37
SwissProt Accessions	P20073	Gene names	ANXA7, ANX7, SNX
Domain Architecture
Description	Annexin A7 (Annexin VII) (Synexin).

BORG5_HUMAN
θ value	4.03905 (rank : 423)	NC score	0.014102 (rank : 488)
Query Neighborhood Hits	493	Target Neighborhood Hits	135	Shared Neighborhood Hits	18
SwissProt Accessions	Q00587, Q96GN1	Gene names	CDC42EP1, BORG5, CEP1, MSE55
Domain Architecture
Description	Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum protein MSE55).

CO4A3_HUMAN
θ value	4.03905 (rank : 424)	NC score	0.031722 (rank : 419)
Query Neighborhood Hits	493	Target Neighborhood Hits	421	Shared Neighborhood Hits	80
SwissProt Accessions	Q01955, Q9BQT2	Gene names	COL4A3
Domain Architecture
Description	Collagen alpha-3(IV) chain precursor (Goodpasture antigen).

DIAP1_MOUSE
θ value	4.03905 (rank : 425)	NC score	0.000670 (rank : 538)
Query Neighborhood Hits	493	Target Neighborhood Hits	839	Shared Neighborhood Hits	35
SwissProt Accessions	O08808	Gene names	Diaph1, Diap1
Domain Architecture
Description	Protein diaphanous homolog 1 (Diaphanous-related formin-1) (DRF1) (mDIA1) (p140mDIA).

FOG1_MOUSE
θ value	4.03905 (rank : 426)	NC score	-0.004730 (rank : 544)
Query Neighborhood Hits	493	Target Neighborhood Hits	1237	Shared Neighborhood Hits	86
SwissProt Accessions	O35615	Gene names	Zfpm1, Fog, Fog1
Domain Architecture	No domain graphic available
Description	Zinc finger protein ZFPM1 (Zinc finger protein multitype 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1).

GR65_HUMAN
θ value	4.03905 (rank : 427)	NC score	0.015023 (rank : 483)
Query Neighborhood Hits	493	Target Neighborhood Hits	148	Shared Neighborhood Hits	27
SwissProt Accessions	Q9BQQ3, Q8N272, Q96H42	Gene names	GORASP1, GRASP65
Domain Architecture	No domain graphic available
Description	Golgi reassembly-stacking protein 1 (Golgi reassembly-stacking protein of 65 kDa) (GRASP65) (Golgi peripheral membrane protein p65) (Golgi phosphoprotein 5) (GOLPH5).

IRX2_HUMAN
θ value	4.03905 (rank : 428)	NC score	0.257846 (rank : 306)
Query Neighborhood Hits	493	Target Neighborhood Hits	358	Shared Neighborhood Hits	210
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX2_MOUSE
θ value	4.03905 (rank : 429)	NC score	0.233480 (rank : 317)
Query Neighborhood Hits	493	Target Neighborhood Hits	264	Shared Neighborhood Hits	199
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

KCNC3_MOUSE
θ value	4.03905 (rank : 430)	NC score	-0.000323 (rank : 541)
Query Neighborhood Hits	493	Target Neighborhood Hits	173	Shared Neighborhood Hits	8
SwissProt Accessions	Q63959, Q62088	Gene names	Kcnc3
Domain Architecture
Description	Potassium voltage-gated channel subfamily C member 3 (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID).

LTBP4_MOUSE
θ value	4.03905 (rank : 431)	NC score	-0.005965 (rank : 547)
Query Neighborhood Hits	493	Target Neighborhood Hits	607	Shared Neighborhood Hits	22
SwissProt Accessions	Q8K4G1, Q8K4G0	Gene names	Ltbp4
Domain Architecture
Description	Latent-transforming growth factor beta-binding protein 4 precursor (LTBP-4).

MAML1_MOUSE
θ value	4.03905 (rank : 432)	NC score	0.025052 (rank : 445)
Query Neighborhood Hits	493	Target Neighborhood Hits	279	Shared Neighborhood Hits	55
SwissProt Accessions	Q6T264, Q505D8, Q5SUC2, Q6PDK3, Q6ZQG5, Q8BIU5, Q8R3T0	Gene names	Maml1, Kiaa0200
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 1 (Mam-1).

MINT_HUMAN
θ value	4.03905 (rank : 433)	NC score	0.003457 (rank : 529)
Query Neighborhood Hits	493	Target Neighborhood Hits	1291	Shared Neighborhood Hits	58
SwissProt Accessions	Q96T58, Q9H9A8, Q9NWH5, Q9UQ01, Q9Y556	Gene names	SPEN, KIAA0929, MINT, SHARP
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

MLL2_HUMAN
θ value	4.03905 (rank : 434)	NC score	0.012747 (rank : 498)
Query Neighborhood Hits	493	Target Neighborhood Hits	1788	Shared Neighborhood Hits	121
SwissProt Accessions	O14686, O14687	Gene names	MLL2, ALR
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein).

NCOR2_MOUSE
θ value	4.03905 (rank : 435)	NC score	0.010632 (rank : 506)
Query Neighborhood Hits	493	Target Neighborhood Hits	790	Shared Neighborhood Hits	36
SwissProt Accessions	Q9WU42, Q9WU43, Q9WUC1	Gene names	Ncor2, Smrt
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC).

NECD_HUMAN
θ value	4.03905 (rank : 436)	NC score	0.002544 (rank : 533)
Query Neighborhood Hits	493	Target Neighborhood Hits	82	Shared Neighborhood Hits	8
SwissProt Accessions	Q99608	Gene names	NDN
Domain Architecture
Description	Necdin.

PP1RA_HUMAN
θ value	4.03905 (rank : 437)	NC score	0.008843 (rank : 513)
Query Neighborhood Hits	493	Target Neighborhood Hits	180	Shared Neighborhood Hits	23
SwissProt Accessions	Q96QC0, O00405	Gene names	PPP1R10, CAT53, FB19, PNUTS
Domain Architecture	No domain graphic available
Description	Serine/threonine-protein phosphatase 1 regulatory subunit 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline- rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99).

SFPQ_MOUSE
θ value	4.03905 (rank : 438)	NC score	0.009670 (rank : 510)
Query Neighborhood Hits	493	Target Neighborhood Hits	958	Shared Neighborhood Hits	59
SwissProt Accessions	Q8VIJ6, Q9ERW2	Gene names	Sfpq
Domain Architecture	No domain graphic available
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).

SMRC2_MOUSE
θ value	4.03905 (rank : 439)	NC score	0.010223 (rank : 509)
Query Neighborhood Hits	493	Target Neighborhood Hits	487	Shared Neighborhood Hits	35
SwissProt Accessions	Q6PDG5, Q6P6P3	Gene names	Smarcc2, Baf170
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170).

TFG_HUMAN
θ value	4.03905 (rank : 440)	NC score	0.020479 (rank : 459)
Query Neighborhood Hits	493	Target Neighborhood Hits	122	Shared Neighborhood Hits	12
SwissProt Accessions	Q92734, Q15656	Gene names	TFG
Domain Architecture
Description	Protein TFG (TRK-fused gene protein).

WASF1_HUMAN
θ value	4.03905 (rank : 441)	NC score	0.030028 (rank : 426)
Query Neighborhood Hits	493	Target Neighborhood Hits	260	Shared Neighborhood Hits	25
SwissProt Accessions	Q92558	Gene names	WASF1, KIAA0269, SCAR1, WAVE1
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 1 (WASP-family protein member 1) (Protein WAVE-1) (Verprolin homology domain-containing protein 1).

ASPP1_MOUSE
θ value	5.27518 (rank : 442)	NC score	-0.000832 (rank : 542)
Query Neighborhood Hits	493	Target Neighborhood Hits	1244	Shared Neighborhood Hits	73
SwissProt Accessions	Q62415	Gene names	Ppp1r13b, Aspp1
Domain Architecture
Description	Apoptosis-stimulating of p53 protein 1 (Protein phosphatase 1 regulatory subunit 13B).

CIC_MOUSE
θ value	5.27518 (rank : 443)	NC score	0.017160 (rank : 473)
Query Neighborhood Hits	493	Target Neighborhood Hits	742	Shared Neighborhood Hits	77
SwissProt Accessions	Q924A2, Q6PDJ8, Q8CGE4, Q8CHH0, Q9CW61	Gene names	Cic, Kiaa0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

CO5A2_HUMAN
θ value	5.27518 (rank : 444)	NC score	0.042947 (rank : 385)
Query Neighborhood Hits	493	Target Neighborhood Hits	760	Shared Neighborhood Hits	115
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

CYYR1_HUMAN
θ value	5.27518 (rank : 445)	NC score	0.020438 (rank : 460)
Query Neighborhood Hits	493	Target Neighborhood Hits	5	Shared Neighborhood Hits	3
SwissProt Accessions	Q96J86, Q96NV7	Gene names	CYYR1, C21orf95
Domain Architecture	No domain graphic available
Description	Cysteine and tyrosine-rich protein 1 precursor (Proline-rich domain- containing protein).

DIAP1_HUMAN
θ value	5.27518 (rank : 446)	NC score	0.001712 (rank : 536)
Query Neighborhood Hits	493	Target Neighborhood Hits	784	Shared Neighborhood Hits	33
SwissProt Accessions	O60610, Q9UC76	Gene names	DIAPH1, DIAP1
Domain Architecture
Description	Protein diaphanous homolog 1 (Diaphanous-related formin-1) (DRF1).

JPH2_HUMAN
θ value	5.27518 (rank : 447)	NC score	0.031578 (rank : 420)
Query Neighborhood Hits	493	Target Neighborhood Hits	639	Shared Neighborhood Hits	115
SwissProt Accessions	Q9BR39, O95913, Q5JY74, Q9UJN4	Gene names	JPH2, JP2
Domain Architecture
Description	Junctophilin-2 (Junctophilin type 2) (JP-2).

MN1_HUMAN
θ value	5.27518 (rank : 448)	NC score	0.012394 (rank : 499)
Query Neighborhood Hits	493	Target Neighborhood Hits	196	Shared Neighborhood Hits	23
SwissProt Accessions	Q10571	Gene names	MN1
Domain Architecture	No domain graphic available
Description	Probable tumor suppressor protein MN1.

MYCN_HUMAN
θ value	5.27518 (rank : 449)	NC score	0.001649 (rank : 537)
Query Neighborhood Hits	493	Target Neighborhood Hits	127	Shared Neighborhood Hits	6
SwissProt Accessions	P04198, Q6LDT9	Gene names	MYCN, NMYC
Domain Architecture
Description	N-myc proto-oncogene protein.

OPLA_MOUSE
θ value	5.27518 (rank : 450)	NC score	0.008176 (rank : 516)
Query Neighborhood Hits	493	Target Neighborhood Hits	14	Shared Neighborhood Hits	3
SwissProt Accessions	Q8K010, Q8R3K2	Gene names	Oplah
Domain Architecture
Description	5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase) (Pyroglutamase) (5- OPase).

PAX5_MOUSE
θ value	5.27518 (rank : 451)	NC score	0.106437 (rank : 341)
Query Neighborhood Hits	493	Target Neighborhood Hits	106	Shared Neighborhood Hits	60
SwissProt Accessions	Q02650	Gene names	Pax5, Pax-5
Domain Architecture
Description	Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP).

SREC_HUMAN
θ value	5.27518 (rank : 452)	NC score	-0.005635 (rank : 546)
Query Neighborhood Hits	493	Target Neighborhood Hits	645	Shared Neighborhood Hits	29
SwissProt Accessions	Q14162, O43701	Gene names	SCARF1, KIAA0149, SREC
Domain Architecture	No domain graphic available
Description	Endothelial cells scavenger receptor precursor (Acetyl LDL receptor) (Scavenger receptor class F member 1).

TMPS2_HUMAN
θ value	5.27518 (rank : 453)	NC score	-0.005108 (rank : 545)
Query Neighborhood Hits	493	Target Neighborhood Hits	252	Shared Neighborhood Hits	9
SwissProt Accessions	O15393, Q9BXX1	Gene names	TMPRSS2, PRSS10
Domain Architecture
Description	Transmembrane protease, serine 2 precursor (EC 3.4.21.-) [Contains: Transmembrane protease, serine 2 non-catalytic chain; Transmembrane protease, serine 2 catalytic chain].

ZN750_MOUSE
θ value	5.27518 (rank : 454)	NC score	0.006749 (rank : 522)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	30
SwissProt Accessions	Q8BH05, Q66JP3, Q8C0L1	Gene names	Znf750
Domain Architecture	No domain graphic available
Description	Protein ZNF750.

AXN2_MOUSE
θ value	6.88961 (rank : 455)	NC score	0.005406 (rank : 526)
Query Neighborhood Hits	493	Target Neighborhood Hits	116	Shared Neighborhood Hits	15
SwissProt Accessions	O88566, Q9QXJ6	Gene names	Axin2
Domain Architecture
Description	Axin-2 (Axis inhibition protein 2) (Conductin) (Axin-like protein) (Axil).

F100A_HUMAN
θ value	6.88961 (rank : 456)	NC score	0.024856 (rank : 447)
Query Neighborhood Hits	493	Target Neighborhood Hits	39	Shared Neighborhood Hits	6
SwissProt Accessions	Q8TB05, Q71MF6	Gene names	FAM100A
Domain Architecture	No domain graphic available
Description	Protein FAM100A.

OGFR_HUMAN
θ value	6.88961 (rank : 457)	NC score	0.076989 (rank : 357)
Query Neighborhood Hits	493	Target Neighborhood Hits	1582	Shared Neighborhood Hits	208
SwissProt Accessions	Q9NZT2, O96029, Q4VXW5, Q96CM2, Q9BQW1, Q9H4H0, Q9H7J5, Q9NZT3, Q9NZT4	Gene names	OGFR
Domain Architecture
Description	Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) (7-60 protein).

PAX5_HUMAN
θ value	6.88961 (rank : 458)	NC score	0.106602 (rank : 340)
Query Neighborhood Hits	493	Target Neighborhood Hits	106	Shared Neighborhood Hits	59
SwissProt Accessions	Q02548, O75933	Gene names	PAX5
Domain Architecture
Description	Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP).

PDCD7_MOUSE
θ value	6.88961 (rank : 459)	NC score	0.013232 (rank : 496)
Query Neighborhood Hits	493	Target Neighborhood Hits	214	Shared Neighborhood Hits	13
SwissProt Accessions	Q9WTY1, Q8R5D9	Gene names	Pdcd7
Domain Architecture	No domain graphic available
Description	Programmed cell death protein 7 (ES18).

PELP1_MOUSE
θ value	6.88961 (rank : 460)	NC score	0.015479 (rank : 480)
Query Neighborhood Hits	493	Target Neighborhood Hits	709	Shared Neighborhood Hits	88
SwissProt Accessions	Q9DBD5, Q5F2E2, Q6PEM0, Q91YM9	Gene names	Pelp1, Mnar
Domain Architecture	No domain graphic available
Description	Proline-, glutamic acid- and leucine-rich protein 1 (Modulator of nongenomic activity of estrogen receptor).

PRRT1_HUMAN
θ value	6.88961 (rank : 461)	NC score	0.015562 (rank : 479)
Query Neighborhood Hits	493	Target Neighborhood Hits	94	Shared Neighborhood Hits	13
SwissProt Accessions	Q99946, Q96DW3, Q96NQ8	Gene names	PRRT1, C6orf31, NG5
Domain Architecture	No domain graphic available
Description	Proline-rich transmembrane protein 1.

PRRT1_MOUSE
θ value	6.88961 (rank : 462)	NC score	0.019532 (rank : 465)
Query Neighborhood Hits	493	Target Neighborhood Hits	102	Shared Neighborhood Hits	17
SwissProt Accessions	O35449	Gene names	Prrt1, Ng5
Domain Architecture	No domain graphic available
Description	Proline-rich transmembrane protein 1.

SOX17_MOUSE
θ value	6.88961 (rank : 463)	NC score	0.011398 (rank : 504)
Query Neighborhood Hits	493	Target Neighborhood Hits	223	Shared Neighborhood Hits	38
SwissProt Accessions	Q61473, Q61472, Q62248	Gene names	Sox17, Sox-17
Domain Architecture
Description	Transcription factor SOX-17.

TARA_HUMAN
θ value	6.88961 (rank : 464)	NC score	0.006981 (rank : 521)
Query Neighborhood Hits	493	Target Neighborhood Hits	1626	Shared Neighborhood Hits	95
SwissProt Accessions	Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4	Gene names	TRIOBP, KIAA1662, TARA
Domain Architecture
Description	TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

WASIP_HUMAN
θ value	6.88961 (rank : 465)	NC score	0.014133 (rank : 487)
Query Neighborhood Hits	493	Target Neighborhood Hits	458	Shared Neighborhood Hits	36
SwissProt Accessions	O43516, Q15220, Q6MZU9, Q9BU37, Q9UNP1	Gene names	WASPIP, WIP
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein-interacting protein (WASP-interacting protein) (PRPL-2 protein).

WASP_MOUSE
θ value	6.88961 (rank : 466)	NC score	0.010360 (rank : 507)
Query Neighborhood Hits	493	Target Neighborhood Hits	223	Shared Neighborhood Hits	22
SwissProt Accessions	P70315	Gene names	Was, Wasp
Domain Architecture
Description	Wiskott-Aldrich syndrome protein homolog (WASp).

ZN385_HUMAN
θ value	6.88961 (rank : 467)	NC score	0.047041 (rank : 384)
Query Neighborhood Hits	493	Target Neighborhood Hits	614	Shared Neighborhood Hits	111
SwissProt Accessions	Q96PM9, Q5VH53, Q9H7R6, Q9UFU3	Gene names	ZNF385, HZF, RZF
Domain Architecture
Description	Zinc finger protein 385 (Hematopoietic zinc finger protein) (Retinal zinc finger protein).

ABI2_HUMAN
θ value	8.99809 (rank : 468)	NC score	-0.000270 (rank : 540)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	20
SwissProt Accessions	Q9NYB9, Q13147, Q13249, Q13801, Q9BV70	Gene names	ABI2, ARGBPIA
Domain Architecture	No domain graphic available
Description	Abl interactor 2 (Abelson interactor 2) (Abi-2) (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1).

ABI2_MOUSE
θ value	8.99809 (rank : 469)	NC score	-0.002082 (rank : 543)
Query Neighborhood Hits	493	Target Neighborhood Hits	266	Shared Neighborhood Hits	11
SwissProt Accessions	P62484, Q6PHU3	Gene names	Abi2
Domain Architecture	No domain graphic available
Description	Abl interactor 2 (Abelson interactor 2) (Abi-2).

ABP1_HUMAN
θ value	8.99809 (rank : 470)	NC score	0.001764 (rank : 535)
Query Neighborhood Hits	493	Target Neighborhood Hits	13	Shared Neighborhood Hits	3
SwissProt Accessions	P19801, Q16683, Q16684, Q56II4, Q6GU42	Gene names	ABP1, AOC1, DAO1
Domain Architecture
Description	Amiloride-sensitive amine oxidase [copper-containing] precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) (Kidney amine oxidase) (KAO).

ANX11_HUMAN
θ value	8.99809 (rank : 471)	NC score	0.013533 (rank : 493)
Query Neighborhood Hits	493	Target Neighborhood Hits	192	Shared Neighborhood Hits	28
SwissProt Accessions	P50995	Gene names	ANXA11, ANX11
Domain Architecture
Description	Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50) (CAP-50) (56 kDa autoantigen).

CO3A1_MOUSE
θ value	8.99809 (rank : 472)	NC score	0.029818 (rank : 427)
Query Neighborhood Hits	493	Target Neighborhood Hits	466	Shared Neighborhood Hits	60
SwissProt Accessions	P08121, Q61429, Q9CRN7	Gene names	Col3a1
Domain Architecture
Description	Collagen alpha-1(III) chain precursor.

CO4A1_MOUSE
θ value	8.99809 (rank : 473)	NC score	0.030198 (rank : 425)
Query Neighborhood Hits	493	Target Neighborhood Hits	450	Shared Neighborhood Hits	78
SwissProt Accessions	P02463	Gene names	Col4a1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

CO4A2_HUMAN
θ value	8.99809 (rank : 474)	NC score	0.032369 (rank : 415)
Query Neighborhood Hits	493	Target Neighborhood Hits	454	Shared Neighborhood Hits	84
SwissProt Accessions	P08572	Gene names	COL4A2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

COAA1_HUMAN
θ value	8.99809 (rank : 475)	NC score	0.020979 (rank : 458)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	49
SwissProt Accessions	Q03692	Gene names	COL10A1
Domain Architecture
Description	Collagen alpha-1(X) chain precursor.

COGA1_HUMAN
θ value	8.99809 (rank : 476)	NC score	0.022362 (rank : 454)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	51
SwissProt Accessions	Q07092	Gene names	COL16A1
Domain Architecture
Description	Collagen alpha-1(XVI) chain precursor.

FOXJ3_MOUSE
θ value	8.99809 (rank : 477)	NC score	0.003003 (rank : 532)
Query Neighborhood Hits	493	Target Neighborhood Hits	190	Shared Neighborhood Hits	17
SwissProt Accessions	Q8BUR3, Q3UTD8	Gene names	Foxj3, Kiaa1041
Domain Architecture
Description	Forkhead box protein J3.

MYO15_HUMAN
θ value	8.99809 (rank : 478)	NC score	0.003133 (rank : 531)
Query Neighborhood Hits	493	Target Neighborhood Hits	671	Shared Neighborhood Hits	89
SwissProt Accessions	Q9UKN7	Gene names	MYO15A, MYO15
Domain Architecture
Description	Myosin-15 (Myosin XV) (Unconventional myosin-15).

NEO1_HUMAN
θ value	8.99809 (rank : 479)	NC score	-0.006323 (rank : 549)
Query Neighborhood Hits	493	Target Neighborhood Hits	530	Shared Neighborhood Hits	9
SwissProt Accessions	Q92859, O00340	Gene names	NEO1, NGN
Domain Architecture
Description	Neogenin precursor.

PCDG1_HUMAN
θ value	8.99809 (rank : 480)	NC score	-0.006063 (rank : 548)
Query Neighborhood Hits	493	Target Neighborhood Hits	158	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y5H4, Q9Y5D6	Gene names	PCDHGA1
Domain Architecture
Description	Protocadherin gamma A1 precursor (PCDH-gamma-A1).

PDCD7_HUMAN
θ value	8.99809 (rank : 481)	NC score	0.015071 (rank : 482)
Query Neighborhood Hits	493	Target Neighborhood Hits	255	Shared Neighborhood Hits	16
SwissProt Accessions	Q8N8D1, Q96AK8, Q9Y6D7	Gene names	PDCD7
Domain Architecture	No domain graphic available
Description	Programmed cell death protein 7 (ES18) (HES18).

PEF1_MOUSE
θ value	8.99809 (rank : 482)	NC score	0.016880 (rank : 474)
Query Neighborhood Hits	493	Target Neighborhood Hits	112	Shared Neighborhood Hits	18
SwissProt Accessions	Q8BFY6, Q8VCT5, Q9CYW8, Q9D934	Gene names	Pef1
Domain Architecture	No domain graphic available
Description	Peflin (PEF protein with a long N-terminal hydrophobic domain) (Penta- EF hand domain-containing protein 1).

PO3F2_HUMAN
θ value	8.99809 (rank : 483)	NC score	0.262748 (rank : 304)
Query Neighborhood Hits	493	Target Neighborhood Hits	308	Shared Neighborhood Hits	267
SwissProt Accessions	P20265, Q14960, Q86V54, Q9UJL0	Gene names	POU3F2, BRN2, OCT7, OTF7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F2_MOUSE
θ value	8.99809 (rank : 484)	NC score	0.262826 (rank : 303)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	268
SwissProt Accessions	P31360	Gene names	Pou3f2, Brn-2, Brn2, Otf7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F4_HUMAN
θ value	8.99809 (rank : 485)	NC score	0.221393 (rank : 323)
Query Neighborhood Hits	493	Target Neighborhood Hits	297	Shared Neighborhood Hits	242
SwissProt Accessions	P49335, Q5H9G9, Q99410	Gene names	POU3F4, BRN4, OTF9
Domain Architecture
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

PO3F4_MOUSE
θ value	8.99809 (rank : 486)	NC score	0.222148 (rank : 322)
Query Neighborhood Hits	493	Target Neighborhood Hits	281	Shared Neighborhood Hits	240
SwissProt Accessions	P62515, P25216	Gene names	Pou3f4, Brn-4, Brn4, Otf9
Domain Architecture	No domain graphic available
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

RBM22_HUMAN
θ value	8.99809 (rank : 487)	NC score	0.013347 (rank : 494)
Query Neighborhood Hits	493	Target Neighborhood Hits	189	Shared Neighborhood Hits	22
SwissProt Accessions	Q9NW64, O95607	Gene names	RBM22
Domain Architecture	No domain graphic available
Description	Pre-mRNA-splicing factor RBM22 (RNA-binding motif protein 22).

RBM22_MOUSE
θ value	8.99809 (rank : 488)	NC score	0.013347 (rank : 495)
Query Neighborhood Hits	493	Target Neighborhood Hits	189	Shared Neighborhood Hits	22
SwissProt Accessions	Q8BHS3, Q3TJB0, Q9CXA0	Gene names	Rbm22
Domain Architecture	No domain graphic available
Description	Pre-mRNA-splicing factor RBM22 (RNA-binding motif protein 22).

REPS1_HUMAN
θ value	8.99809 (rank : 489)	NC score	0.000063 (rank : 539)
Query Neighborhood Hits	493	Target Neighborhood Hits	205	Shared Neighborhood Hits	8
SwissProt Accessions	Q96D71, Q8NDR7, Q8WU62, Q9BXY9	Gene names	REPS1
Domain Architecture
Description	RalBP1-associated Eps domain-containing protein 1 (RalBP1-interacting protein 1).

RUSC2_MOUSE
θ value	8.99809 (rank : 490)	NC score	0.010691 (rank : 505)
Query Neighborhood Hits	493	Target Neighborhood Hits	305	Shared Neighborhood Hits	32
SwissProt Accessions	Q80U22, Q8R1D6	Gene names	Rusc2, Kiaa0375
Domain Architecture	No domain graphic available
Description	RUN and SH3 domain-containing protein 2.

SCAR3_MOUSE
θ value	8.99809 (rank : 491)	NC score	0.018703 (rank : 467)
Query Neighborhood Hits	493	Target Neighborhood Hits	239	Shared Neighborhood Hits	38
SwissProt Accessions	Q8C850, Q8C6N1	Gene names	Scara3
Domain Architecture	No domain graphic available
Description	Scavenger receptor class A member 3.

SIX3_HUMAN
θ value	8.99809 (rank : 492)	NC score	0.227305 (rank : 319)
Query Neighborhood Hits	493	Target Neighborhood Hits	285	Shared Neighborhood Hits	236
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
θ value	8.99809 (rank : 493)	NC score	0.227291 (rank : 320)
Query Neighborhood Hits	493	Target Neighborhood Hits	289	Shared Neighborhood Hits	237
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

BCL9_HUMAN
θ value	θ > 10 (rank : 494)	NC score	0.052053 (rank : 374)
Query Neighborhood Hits	493	Target Neighborhood Hits	1008	Shared Neighborhood Hits	156
SwissProt Accessions	O00512	Gene names	BCL9
Domain Architecture	No domain graphic available
Description	B-cell lymphoma 9 protein (Bcl-9) (Legless homolog).

CUTL1_HUMAN
θ value	θ > 10 (rank : 495)	NC score	0.099277 (rank : 344)
Query Neighborhood Hits	493	Target Neighborhood Hits	1574	Shared Neighborhood Hits	210
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

CUTL1_MOUSE
θ value	θ > 10 (rank : 496)	NC score	0.112495 (rank : 337)
Query Neighborhood Hits	493	Target Neighborhood Hits	1620	Shared Neighborhood Hits	223
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

CUTL2_HUMAN
θ value	θ > 10 (rank : 497)	NC score	0.105855 (rank : 342)
Query Neighborhood Hits	493	Target Neighborhood Hits	906	Shared Neighborhood Hits	199
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_MOUSE
θ value	θ > 10 (rank : 498)	NC score	0.103959 (rank : 343)
Query Neighborhood Hits	493	Target Neighborhood Hits	771	Shared Neighborhood Hits	171
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

DUX2_HUMAN
θ value	θ > 10 (rank : 499)	NC score	0.430126 (rank : 260)
Query Neighborhood Hits	493	Target Neighborhood Hits	173	Shared Neighborhood Hits	163
SwissProt Accessions	O75505	Gene names	DUX2
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 2.

HMBX1_HUMAN
θ value	θ > 10 (rank : 500)	NC score	0.145384 (rank : 332)
Query Neighborhood Hits	493	Target Neighborhood Hits	118	Shared Neighborhood Hits	94
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HMBX1_MOUSE
θ value	θ > 10 (rank : 501)	NC score	0.151053 (rank : 331)
Query Neighborhood Hits	493	Target Neighborhood Hits	117	Shared Neighborhood Hits	94
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HNF6_HUMAN
θ value	θ > 10 (rank : 502)	NC score	0.060696 (rank : 364)
Query Neighborhood Hits	493	Target Neighborhood Hits	127	Shared Neighborhood Hits	74
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HNF6_MOUSE
θ value	θ > 10 (rank : 503)	NC score	0.064547 (rank : 362)
Query Neighborhood Hits	493	Target Neighborhood Hits	124	Shared Neighborhood Hits	76
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HOP_HUMAN
θ value	θ > 10 (rank : 504)	NC score	0.255712 (rank : 308)
Query Neighborhood Hits	493	Target Neighborhood Hits	107	Shared Neighborhood Hits	98
SwissProt Accessions	Q9BPY8, Q8N0V6, Q96CI1	Gene names	HOP, HOD, LAGY, NECC1, OB1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1).

HOP_MOUSE
θ value	θ > 10 (rank : 505)	NC score	0.247793 (rank : 310)
Query Neighborhood Hits	493	Target Neighborhood Hits	102	Shared Neighborhood Hits	91
SwissProt Accessions	Q8R1H0, Q8C1N5, Q8CJ22	Gene names	Hop, Hod, Ob1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Homeobox-only protein) (Odd homeobox protein 1) (mOB1).

LMO3_HUMAN
θ value	θ > 10 (rank : 506)	NC score	0.077907 (rank : 353)
Query Neighborhood Hits	493	Target Neighborhood Hits	111	Shared Neighborhood Hits	25
SwissProt Accessions	Q8TAP4, Q8N974, Q9UDD5	Gene names	LMO3, RBTN3, RHOM3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1) (Rhombotin-3).

LMO3_MOUSE
θ value	θ > 10 (rank : 507)	NC score	0.077907 (rank : 354)
Query Neighborhood Hits	493	Target Neighborhood Hits	111	Shared Neighborhood Hits	25
SwissProt Accessions	Q8BZL8	Gene names	Lmo3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1).

LMO4_HUMAN
θ value	θ > 10 (rank : 508)	NC score	0.079578 (rank : 348)
Query Neighborhood Hits	493	Target Neighborhood Hits	111	Shared Neighborhood Hits	25
SwissProt Accessions	P61968, O00158, O88894	Gene names	LMO4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LMO4_MOUSE
θ value	θ > 10 (rank : 509)	NC score	0.079578 (rank : 349)
Query Neighborhood Hits	493	Target Neighborhood Hits	111	Shared Neighborhood Hits	25
SwissProt Accessions	P61969, O00158, O88894	Gene names	Lmo4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LPP_HUMAN
θ value	θ > 10 (rank : 510)	NC score	0.060593 (rank : 365)
Query Neighborhood Hits	493	Target Neighborhood Hits	775	Shared Neighborhood Hits	145
SwissProt Accessions	Q93052, Q8NFX5	Gene names	LPP
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma).

MEIS1_HUMAN
θ value	θ > 10 (rank : 511)	NC score	0.050156 (rank : 380)
Query Neighborhood Hits	493	Target Neighborhood Hits	115	Shared Neighborhood Hits	82
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS1_MOUSE
θ value	θ > 10 (rank : 512)	NC score	0.050154 (rank : 381)
Query Neighborhood Hits	493	Target Neighborhood Hits	115	Shared Neighborhood Hits	82
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS2_HUMAN
θ value	θ > 10 (rank : 513)	NC score	0.058543 (rank : 369)
Query Neighborhood Hits	493	Target Neighborhood Hits	182	Shared Neighborhood Hits	96
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
θ value	θ > 10 (rank : 514)	NC score	0.059165 (rank : 366)
Query Neighborhood Hits	493	Target Neighborhood Hits	208	Shared Neighborhood Hits	103
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS3_HUMAN
θ value	θ > 10 (rank : 515)	NC score	0.051905 (rank : 376)
Query Neighborhood Hits	493	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS3_MOUSE
θ value	θ > 10 (rank : 516)	NC score	0.050609 (rank : 378)
Query Neighborhood Hits	493	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MUC1_HUMAN
θ value	θ > 10 (rank : 517)	NC score	0.051883 (rank : 377)
Query Neighborhood Hits	493	Target Neighborhood Hits	975	Shared Neighborhood Hits	151
SwissProt Accessions	P15941, P13931, P15942, P17626, Q14128, Q14876, Q16437, Q16442, Q16615, Q9BXA4, Q9UE75, Q9UE76, Q9UQL1, Q9Y4J2	Gene names	MUC1
Domain Architecture
Description	Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut- reactive urinary mucin) (PUM) (Breast carcinoma-associated antigen DF3) (CD227 antigen).

ONEC2_HUMAN
θ value	θ > 10 (rank : 518)	NC score	0.054618 (rank : 371)
Query Neighborhood Hits	493	Target Neighborhood Hits	115	Shared Neighborhood Hits	67
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

ONEC2_MOUSE
θ value	θ > 10 (rank : 519)	NC score	0.052706 (rank : 372)
Query Neighborhood Hits	493	Target Neighborhood Hits	123	Shared Neighborhood Hits	69
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

PAX1_HUMAN
θ value	θ > 10 (rank : 520)	NC score	0.078017 (rank : 352)
Query Neighborhood Hits	493	Target Neighborhood Hits	72	Shared Neighborhood Hits	30
SwissProt Accessions	P15863, Q642X9, Q6NTC0, Q9Y558	Gene names	PAX1, HUP48
Domain Architecture
Description	Paired box protein Pax-1 (HUP48).

PAX1_MOUSE
θ value	θ > 10 (rank : 521)	NC score	0.076620 (rank : 358)
Query Neighborhood Hits	493	Target Neighborhood Hits	69	Shared Neighborhood Hits	22
SwissProt Accessions	P09084, Q9R2B1	Gene names	Pax1, Pax-1
Domain Architecture
Description	Paired box protein Pax-1.

PAX2_HUMAN
θ value	θ > 10 (rank : 522)	NC score	0.108963 (rank : 339)
Query Neighborhood Hits	493	Target Neighborhood Hits	84	Shared Neighborhood Hits	58
SwissProt Accessions	Q02962, Q15105, Q15110, Q15837	Gene names	PAX2
Domain Architecture
Description	Paired box protein Pax-2.

PAX2_MOUSE
θ value	θ > 10 (rank : 523)	NC score	0.109386 (rank : 338)
Query Neighborhood Hits	493	Target Neighborhood Hits	86	Shared Neighborhood Hits	58
SwissProt Accessions	P32114	Gene names	Pax2, Pax-2
Domain Architecture
Description	Paired box protein Pax-2.

PAX8_HUMAN
θ value	θ > 10 (rank : 524)	NC score	0.084034 (rank : 347)
Query Neighborhood Hits	493	Target Neighborhood Hits	56	Shared Neighborhood Hits	25
SwissProt Accessions	Q06710, Q09155, Q16337, Q16338, Q16339, Q96J49	Gene names	PAX8
Domain Architecture
Description	Paired box protein Pax-8.

PAX8_MOUSE
θ value	θ > 10 (rank : 525)	NC score	0.092055 (rank : 345)
Query Neighborhood Hits	493	Target Neighborhood Hits	62	Shared Neighborhood Hits	31
SwissProt Accessions	Q00288, P97342	Gene names	Pax8, Pax-8
Domain Architecture
Description	Paired box protein Pax-8.

PAX9_HUMAN
θ value	θ > 10 (rank : 526)	NC score	0.078605 (rank : 351)
Query Neighborhood Hits	493	Target Neighborhood Hits	92	Shared Neighborhood Hits	22
SwissProt Accessions	P55771, Q99582, Q9UQR4	Gene names	PAX9
Domain Architecture
Description	Paired box protein Pax-9.

PAX9_MOUSE
θ value	θ > 10 (rank : 527)	NC score	0.079277 (rank : 350)
Query Neighborhood Hits	493	Target Neighborhood Hits	67	Shared Neighborhood Hits	17
SwissProt Accessions	P47242	Gene names	Pax9, Pax-9
Domain Architecture
Description	Paired box protein Pax-9.

PO5FL_HUMAN
θ value	θ > 10 (rank : 528)	NC score	0.139104 (rank : 335)
Query Neighborhood Hits	493	Target Neighborhood Hits	214	Shared Neighborhood Hits	181
SwissProt Accessions	Q06416, Q9BZV9	Gene names	POU5F1P1, OTF3C, POU5FLC8
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 1 (Octamer- binding protein 3-like).

PO5FM_HUMAN
θ value	θ > 10 (rank : 529)	NC score	0.140139 (rank : 334)
Query Neighborhood Hits	493	Target Neighborhood Hits	212	Shared Neighborhood Hits	184
SwissProt Accessions	Q9BZV7	Gene names	POU5F1P1, POU5FLC20
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 2.

PO5FN_HUMAN
θ value	θ > 10 (rank : 530)	NC score	0.084439 (rank : 346)
Query Neighborhood Hits	493	Target Neighborhood Hits	134	Shared Neighborhood Hits	112
SwissProt Accessions	Q9BZW0	Gene names	POU5FLC1
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 3.

PRRT3_HUMAN
θ value	θ > 10 (rank : 531)	NC score	0.054979 (rank : 370)
Query Neighborhood Hits	493	Target Neighborhood Hits	998	Shared Neighborhood Hits	139
SwissProt Accessions	Q5FWE3, Q49AD0, Q6UXY6, Q8NBC9	Gene names	PRRT3, UNQ5823/PRO19642
Domain Architecture	No domain graphic available
Description	Proline-rich transmembrane protein 3.

RBTN1_HUMAN
θ value	θ > 10 (rank : 532)	NC score	0.077809 (rank : 356)
Query Neighborhood Hits	493	Target Neighborhood Hits	110	Shared Neighborhood Hits	25
SwissProt Accessions	P25800, Q4VBC5	Gene names	LMO1, RBTN1, RHOM1, TTG1
Domain Architecture
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (T-cell translocation protein 1) (LIM-only protein 1).

RBTN1_MOUSE
θ value	θ > 10 (rank : 533)	NC score	0.077825 (rank : 355)
Query Neighborhood Hits	493	Target Neighborhood Hits	109	Shared Neighborhood Hits	25
SwissProt Accessions	Q924W9	Gene names	Lmo1, Rbtn1, Rhom1, Ttg1
Domain Architecture	No domain graphic available
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (LIM-only protein 1).

RBTN2_HUMAN
θ value	θ > 10 (rank : 534)	NC score	0.074194 (rank : 360)
Query Neighborhood Hits	493	Target Neighborhood Hits	114	Shared Neighborhood Hits	25
SwissProt Accessions	P25791, Q9HD58	Gene names	LMO2, RBTN2, RHOM2, TTG2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RBTN2_MOUSE
θ value	θ > 10 (rank : 535)	NC score	0.074196 (rank : 359)
Query Neighborhood Hits	493	Target Neighborhood Hits	114	Shared Neighborhood Hits	25
SwissProt Accessions	P25801	Gene names	Lmo2, Rbtn-2, Rbtn2, Rhom-2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RHOX5_MOUSE
θ value	θ > 10 (rank : 536)	NC score	0.179091 (rank : 325)
Query Neighborhood Hits	493	Target Neighborhood Hits	69	Shared Neighborhood Hits	57
SwissProt Accessions	P52651	Gene names	Rhox5, Pem
Domain Architecture	No domain graphic available
Description	Homeobox protein Rhox5 (Reproductive homeobox on chromosome X 5) (Homeobox protein Pem) (Placenta and embryonic expression protein).

SC24C_HUMAN
θ value	θ > 10 (rank : 537)	NC score	0.050452 (rank : 379)
Query Neighborhood Hits	493	Target Neighborhood Hits	662	Shared Neighborhood Hits	139
SwissProt Accessions	P53992, Q8WV25	Gene names	SEC24C, KIAA0079
Domain Architecture
Description	Protein transport protein Sec24C (SEC24-related protein C).

SIX1_HUMAN
θ value	θ > 10 (rank : 538)	NC score	0.272818 (rank : 301)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	286
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_MOUSE
θ value	θ > 10 (rank : 539)	NC score	0.273048 (rank : 300)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	286
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX2_HUMAN
θ value	θ > 10 (rank : 540)	NC score	0.281693 (rank : 297)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	274
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX2_MOUSE
θ value	θ > 10 (rank : 541)	NC score	0.302364 (rank : 290)
Query Neighborhood Hits	493	Target Neighborhood Hits	376	Shared Neighborhood Hits	296
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX5_MOUSE
θ value	θ > 10 (rank : 542)	NC score	0.169611 (rank : 326)
Query Neighborhood Hits	493	Target Neighborhood Hits	354	Shared Neighborhood Hits	200
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

SIX6_HUMAN
θ value	θ > 10 (rank : 543)	NC score	0.224895 (rank : 321)
Query Neighborhood Hits	493	Target Neighborhood Hits	269	Shared Neighborhood Hits	225
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

SIX6_MOUSE
θ value	θ > 10 (rank : 544)	NC score	0.219949 (rank : 324)
Query Neighborhood Hits	493	Target Neighborhood Hits	267	Shared Neighborhood Hits	226
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

SPRM1_HUMAN
θ value	θ > 10 (rank : 545)	NC score	0.058644 (rank : 368)
Query Neighborhood Hits	493	Target Neighborhood Hits	72	Shared Neighborhood Hits	60
SwissProt Accessions	Q8N7G0, Q8N748	Gene names	SPRM1
Domain Architecture
Description	Sperm 1 POU-domain transcription factor (SPRM-1).

SPRM1_MOUSE
θ value	θ > 10 (rank : 546)	NC score	0.059012 (rank : 367)
Query Neighborhood Hits	493	Target Neighborhood Hits	73	Shared Neighborhood Hits	60
SwissProt Accessions	Q9DAC9	Gene names	Sprm1
Domain Architecture
Description	Sperm 1 POU-domain transcription factor (SPRM-1).

SSBP4_HUMAN
θ value	θ > 10 (rank : 547)	NC score	0.067902 (rank : 361)
Query Neighborhood Hits	493	Target Neighborhood Hits	753	Shared Neighborhood Hits	166
SwissProt Accessions	Q9BWG4	Gene names	SSBP4
Domain Architecture
Description	Single-stranded DNA-binding protein 4.

TGIF2_MOUSE
θ value	θ > 10 (rank : 548)	NC score	0.052164 (rank : 373)
Query Neighborhood Hits	493	Target Neighborhood Hits	127	Shared Neighborhood Hits	63
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

ZHX1_HUMAN
θ value	θ > 10 (rank : 549)	NC score	0.155291 (rank : 330)
Query Neighborhood Hits	493	Target Neighborhood Hits	307	Shared Neighborhood Hits	196
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX1_MOUSE
θ value	θ > 10 (rank : 550)	NC score	0.163031 (rank : 328)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	202
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX2_MOUSE
θ value	θ > 10 (rank : 551)	NC score	0.135196 (rank : 336)
Query Neighborhood Hits	493	Target Neighborhood Hits	435	Shared Neighborhood Hits	173
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ZHX3_HUMAN
θ value	θ > 10 (rank : 552)	NC score	0.167596 (rank : 327)
Query Neighborhood Hits	493	Target Neighborhood Hits	331	Shared Neighborhood Hits	207
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX3_MOUSE
θ value	θ > 10 (rank : 553)	NC score	0.159188 (rank : 329)
Query Neighborhood Hits	493	Target Neighborhood Hits	321	Shared Neighborhood Hits	202
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

Hits sorted by NC score

HXB3_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	493	Target Neighborhood Hits	493	Shared Neighborhood Hits	493
SwissProt Accessions	P09026, P10285, Q4PJ06, Q61680	Gene names	Hoxb3, Hox-2.7, Hoxb-3
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2.7) (Homeobox protein MH-23).

HXB3_HUMAN
NC score	0.992491 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	493	Target Neighborhood Hits	559	Shared Neighborhood Hits	448
SwissProt Accessions	P14651, O95615, P17484	Gene names	HOXB3, HOX2G
Domain Architecture
Description	Homeobox protein Hox-B3 (Hox-2G) (Hox-2.7).

HXD3_HUMAN
NC score	0.978233 (rank : 3)	θ value	3.0147e-88 (rank : 3)
Query Neighborhood Hits	493	Target Neighborhood Hits	433	Shared Neighborhood Hits	324
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

HXD3_MOUSE
NC score	0.977851 (rank : 4)	θ value	3.93732e-88 (rank : 4)
Query Neighborhood Hits	493	Target Neighborhood Hits	435	Shared Neighborhood Hits	326
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

HXA3_HUMAN
NC score	0.971552 (rank : 5)	θ value	7.68416e-84 (rank : 5)
Query Neighborhood Hits	493	Target Neighborhood Hits	535	Shared Neighborhood Hits	328
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXA3_MOUSE
NC score	0.969638 (rank : 6)	θ value	9.39325e-82 (rank : 6)
Query Neighborhood Hits	493	Target Neighborhood Hits	558	Shared Neighborhood Hits	328
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

IPF1_MOUSE
NC score	0.949019 (rank : 7)	θ value	4.58923e-20 (rank : 22)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	312
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

IPF1_HUMAN
NC score	0.948811 (rank : 8)	θ value	4.58923e-20 (rank : 21)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	308
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

HXB2_MOUSE
NC score	0.946159 (rank : 9)	θ value	7.56453e-23 (rank : 9)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	310
SwissProt Accessions	P0C1T1	Gene names	Hoxb2, Hox-2.8
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-B2 (Hox-2.8).

HXA2_MOUSE
NC score	0.945774 (rank : 10)	θ value	3.39556e-23 (rank : 7)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	311
SwissProt Accessions	P31245, Q149U3, Q920T8	Gene names	Hoxa2, Hox-1.11, Hoxa-2
Domain Architecture
Description	Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11).

HXA2_HUMAN
NC score	0.944773 (rank : 11)	θ value	7.56453e-23 (rank : 8)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	320
SwissProt Accessions	O43364	Gene names	HOXA2
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A2.

HXB2_HUMAN
NC score	0.943849 (rank : 12)	θ value	6.40375e-22 (rank : 13)
Query Neighborhood Hits	493	Target Neighborhood Hits	367	Shared Neighborhood Hits	314
SwissProt Accessions	P14652, P10913, P17485	Gene names	HOXB2, HOX2H
Domain Architecture
Description	Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8).

GSHI_HUMAN
NC score	0.940992 (rank : 13)	θ value	2.13179e-17 (rank : 36)
Query Neighborhood Hits	493	Target Neighborhood Hits	314	Shared Neighborhood Hits	306
SwissProt Accessions	Q9H4S2	Gene names	GSH1
Domain Architecture
Description	Homeobox protein GSH-1.

GSHI_MOUSE
NC score	0.940509 (rank : 14)	θ value	2.13179e-17 (rank : 37)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	304
SwissProt Accessions	P31315	Gene names	Gsh1, Gsh-1
Domain Architecture
Description	Homeobox protein GSH-1.

GSH2_HUMAN
NC score	0.939345 (rank : 15)	θ value	9.56915e-18 (rank : 35)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	306
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

HXD4_HUMAN
NC score	0.938276 (rank : 16)	θ value	3.51386e-20 (rank : 19)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	304
SwissProt Accessions	P09016, Q96AU0	Gene names	HOXD4, HOX4B
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13).

HXA4_MOUSE
NC score	0.938252 (rank : 17)	θ value	6.40375e-22 (rank : 12)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	316
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

HXA4_HUMAN
NC score	0.938205 (rank : 18)	θ value	4.58923e-20 (rank : 20)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	313
SwissProt Accessions	Q00056, O43366	Gene names	HOXA4, HOX1D
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4).

GSH2_MOUSE
NC score	0.937561 (rank : 19)	θ value	3.63628e-17 (rank : 38)
Query Neighborhood Hits	493	Target Neighborhood Hits	319	Shared Neighborhood Hits	304
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HLXB9_HUMAN
NC score	0.937471 (rank : 20)	θ value	5.25075e-16 (rank : 49)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	315
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

HXC5_HUMAN
NC score	0.937330 (rank : 21)	θ value	5.99374e-20 (rank : 25)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	302
SwissProt Accessions	Q00444	Gene names	HOXC5, HOX3D
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3D) (CP11).

HLXB9_MOUSE
NC score	0.937123 (rank : 22)	θ value	5.25075e-16 (rank : 50)
Query Neighborhood Hits	493	Target Neighborhood Hits	354	Shared Neighborhood Hits	320
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

HXC5_MOUSE
NC score	0.937107 (rank : 23)	θ value	5.99374e-20 (rank : 26)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	302
SwissProt Accessions	P32043, Q8BJW4	Gene names	Hoxc5, Hox-3.4, Hoxc-5
Domain Architecture
Description	Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2).

HXD4_MOUSE
NC score	0.936966 (rank : 24)	θ value	1.5773e-20 (rank : 17)
Query Neighborhood Hits	493	Target Neighborhood Hits	339	Shared Neighborhood Hits	306
SwissProt Accessions	P10628, P97451, Q3UXL6	Gene names	Hoxd4, Hox-4.2, Hoxd-4
Domain Architecture
Description	Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1).

HXA5_MOUSE
NC score	0.936713 (rank : 25)	θ value	2.87452e-22 (rank : 11)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	305
SwissProt Accessions	P09021, Q91VQ5	Gene names	Hoxa5, Hox-1.3, Hoxa-5
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1.3) (M2).

HXA5_HUMAN
NC score	0.936600 (rank : 26)	θ value	2.87452e-22 (rank : 10)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	303
SwissProt Accessions	P20719, O43367, Q96CY6	Gene names	HOXA5, HOX1C
Domain Architecture
Description	Homeobox protein Hox-A5 (Hox-1C).

HXB5_HUMAN
NC score	0.936280 (rank : 27)	θ value	1.09232e-21 (rank : 14)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	302
SwissProt Accessions	P09067, P09069	Gene names	HOXB5, HOX2A
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1).

HXB4_HUMAN
NC score	0.935849 (rank : 28)	θ value	5.99374e-20 (rank : 23)
Query Neighborhood Hits	493	Target Neighborhood Hits	376	Shared Neighborhood Hits	318
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXB5_MOUSE
NC score	0.935454 (rank : 29)	θ value	1.09232e-21 (rank : 15)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	302
SwissProt Accessions	P09079, Q3ZAY8	Gene names	Hoxb5, Hox-2.1, Hoxb-5
Domain Architecture
Description	Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1).

HXB1_MOUSE
NC score	0.935286 (rank : 30)	θ value	2.27762e-19 (rank : 27)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	317
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

HXC4_MOUSE
NC score	0.935043 (rank : 31)	θ value	7.0802e-21 (rank : 16)
Query Neighborhood Hits	493	Target Neighborhood Hits	365	Shared Neighborhood Hits	316
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

HXB1_HUMAN
NC score	0.934222 (rank : 32)	θ value	2.5182e-18 (rank : 30)
Query Neighborhood Hits	493	Target Neighborhood Hits	356	Shared Neighborhood Hits	321
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

HXC4_HUMAN
NC score	0.933928 (rank : 33)	θ value	2.69047e-20 (rank : 18)
Query Neighborhood Hits	493	Target Neighborhood Hits	361	Shared Neighborhood Hits	313
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXD1_HUMAN
NC score	0.933402 (rank : 34)	θ value	2.35696e-16 (rank : 48)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	313
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

HXB4_MOUSE
NC score	0.932759 (rank : 35)	θ value	5.99374e-20 (rank : 24)
Query Neighborhood Hits	493	Target Neighborhood Hits	375	Shared Neighborhood Hits	313
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

HXD1_MOUSE
NC score	0.930908 (rank : 36)	θ value	1.058e-16 (rank : 43)
Query Neighborhood Hits	493	Target Neighborhood Hits	381	Shared Neighborhood Hits	316
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

HXA7_HUMAN
NC score	0.930063 (rank : 37)	θ value	2.5182e-18 (rank : 29)
Query Neighborhood Hits	493	Target Neighborhood Hits	309	Shared Neighborhood Hits	302
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXB7_HUMAN
NC score	0.929696 (rank : 38)	θ value	5.60996e-18 (rank : 34)
Query Neighborhood Hits	493	Target Neighborhood Hits	311	Shared Neighborhood Hits	304
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

HXA1_MOUSE
NC score	0.928968 (rank : 39)	θ value	5.25075e-16 (rank : 52)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	316
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

HXB7_MOUSE
NC score	0.928697 (rank : 40)	θ value	4.29542e-18 (rank : 31)
Query Neighborhood Hits	493	Target Neighborhood Hits	314	Shared Neighborhood Hits	304
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXA1_HUMAN
NC score	0.928440 (rank : 41)	θ value	5.25075e-16 (rank : 51)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	315
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXA7_MOUSE
NC score	0.927943 (rank : 42)	θ value	1.13037e-18 (rank : 28)
Query Neighborhood Hits	493	Target Neighborhood Hits	318	Shared Neighborhood Hits	304
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXB6_MOUSE
NC score	0.925204 (rank : 43)	θ value	3.63628e-17 (rank : 40)
Query Neighborhood Hits	493	Target Neighborhood Hits	309	Shared Neighborhood Hits	297
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

HXC6_HUMAN
NC score	0.925059 (rank : 44)	θ value	6.20254e-17 (rank : 41)
Query Neighborhood Hits	493	Target Neighborhood Hits	306	Shared Neighborhood Hits	298
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
NC score	0.925059 (rank : 45)	θ value	6.20254e-17 (rank : 42)
Query Neighborhood Hits	493	Target Neighborhood Hits	306	Shared Neighborhood Hits	298
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

HXB6_HUMAN
NC score	0.924980 (rank : 46)	θ value	3.63628e-17 (rank : 39)
Query Neighborhood Hits	493	Target Neighborhood Hits	307	Shared Neighborhood Hits	297
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXA6_MOUSE
NC score	0.923736 (rank : 47)	θ value	5.60996e-18 (rank : 33)
Query Neighborhood Hits	493	Target Neighborhood Hits	304	Shared Neighborhood Hits	296
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

HXA6_HUMAN
NC score	0.923336 (rank : 48)	θ value	5.60996e-18 (rank : 32)
Query Neighborhood Hits	493	Target Neighborhood Hits	309	Shared Neighborhood Hits	300
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

MEOX1_MOUSE
NC score	0.923255 (rank : 49)	θ value	7.58209e-15 (rank : 62)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	315
SwissProt Accessions	P32442	Gene names	Meox1, Mox-1, Mox1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

MEOX1_HUMAN
NC score	0.923130 (rank : 50)	θ value	1.16975e-15 (rank : 54)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	308
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

CDX2_MOUSE
NC score	0.920391 (rank : 51)	θ value	2.0648e-12 (rank : 86)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	300
SwissProt Accessions	P43241	Gene names	Cdx2, Cdx-2
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2).

CDX2_HUMAN
NC score	0.918581 (rank : 52)	θ value	1.2105e-12 (rank : 82)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	300
SwissProt Accessions	Q99626, O00503, Q969L8	Gene names	CDX2, CDX3
Domain Architecture
Description	Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3).

MEOX2_MOUSE
NC score	0.918455 (rank : 53)	θ value	1.02475e-11 (rank : 99)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	308
SwissProt Accessions	P32443, Q544T6	Gene names	Meox2, Gax, Mox-2, Mox2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2).

MEOX2_HUMAN
NC score	0.918183 (rank : 54)	θ value	1.02475e-11 (rank : 98)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	308
SwissProt Accessions	P50222, O75263, Q9UPL6	Gene names	MEOX2, GAX, MOX2
Domain Architecture
Description	Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox).

CDX1_HUMAN
NC score	0.917588 (rank : 55)	θ value	7.84624e-12 (rank : 94)
Query Neighborhood Hits	493	Target Neighborhood Hits	382	Shared Neighborhood Hits	302
SwissProt Accessions	P47902, Q4VAU4, Q9NYK8	Gene names	CDX1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX1_MOUSE
NC score	0.917354 (rank : 56)	θ value	7.84624e-12 (rank : 95)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	301
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

BSH_MOUSE
NC score	0.916876 (rank : 57)	θ value	1.16975e-15 (rank : 53)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	316
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

GBX1_HUMAN
NC score	0.916808 (rank : 58)	θ value	7.58209e-15 (rank : 61)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	295
SwissProt Accessions	Q14549	Gene names	GBX1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

NKX12_MOUSE
NC score	0.915624 (rank : 59)	θ value	1.133e-10 (rank : 117)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	304
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

GBX1_MOUSE
NC score	0.915036 (rank : 60)	θ value	9.90251e-15 (rank : 63)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	294
SwissProt Accessions	P82976, Q8CGW5	Gene names	Gbx1
Domain Architecture	No domain graphic available
Description	Homeobox protein GBX-1 (Gastrulation and brain-specific homeobox protein 1).

CDX4_HUMAN
NC score	0.912770 (rank : 61)	θ value	1.09485e-13 (rank : 71)
Query Neighborhood Hits	493	Target Neighborhood Hits	366	Shared Neighborhood Hits	309
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

HXD9_HUMAN
NC score	0.912338 (rank : 62)	θ value	1.52774e-15 (rank : 55)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	313
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXA9_MOUSE
NC score	0.911949 (rank : 63)	θ value	2.35696e-16 (rank : 47)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	307
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

CDX4_MOUSE
NC score	0.911128 (rank : 64)	θ value	2.0648e-12 (rank : 87)
Query Neighborhood Hits	493	Target Neighborhood Hits	378	Shared Neighborhood Hits	306
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

HXA9_HUMAN
NC score	0.911106 (rank : 65)	θ value	2.35696e-16 (rank : 46)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	307
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

GBX2_MOUSE
NC score	0.910139 (rank : 66)	θ value	3.76295e-14 (rank : 67)
Query Neighborhood Hits	493	Target Neighborhood Hits	326	Shared Neighborhood Hits	294
SwissProt Accessions	P48031	Gene names	Gbx2, Mmoxa, Stra7
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2) (Homeobox protein STRA7).

GBX2_HUMAN
NC score	0.910086 (rank : 67)	θ value	3.76295e-14 (rank : 66)
Query Neighborhood Hits	493	Target Neighborhood Hits	322	Shared Neighborhood Hits	294
SwissProt Accessions	P52951, O43833, Q53RX5, Q9Y5Y1	Gene names	GBX2
Domain Architecture
Description	Homeobox protein GBX-2 (Gastrulation and brain-specific homeobox protein 2).

HXD9_MOUSE
NC score	0.909346 (rank : 68)	θ value	1.52774e-15 (rank : 56)
Query Neighborhood Hits	493	Target Neighborhood Hits	359	Shared Neighborhood Hits	311
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

HXD8_HUMAN
NC score	0.908473 (rank : 69)	θ value	1.29331e-14 (rank : 64)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	309
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HXD8_MOUSE
NC score	0.908172 (rank : 70)	θ value	1.29331e-14 (rank : 65)
Query Neighborhood Hits	493	Target Neighborhood Hits	333	Shared Neighborhood Hits	308
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXD11_HUMAN
NC score	0.908170 (rank : 71)	θ value	7.09661e-13 (rank : 79)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	311
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

HXD12_HUMAN
NC score	0.908127 (rank : 72)	θ value	2.69671e-12 (rank : 88)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	304
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXB9_MOUSE
NC score	0.907651 (rank : 73)	θ value	1.38178e-16 (rank : 44)
Query Neighborhood Hits	493	Target Neighborhood Hits	344	Shared Neighborhood Hits	314
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HXB8_MOUSE
NC score	0.907593 (rank : 74)	θ value	1.99529e-15 (rank : 58)
Query Neighborhood Hits	493	Target Neighborhood Hits	325	Shared Neighborhood Hits	311
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

HXB8_HUMAN
NC score	0.907430 (rank : 75)	θ value	1.99529e-15 (rank : 57)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	310
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

BARX1_HUMAN
NC score	0.907425 (rank : 76)	θ value	7.84624e-12 (rank : 93)
Query Neighborhood Hits	493	Target Neighborhood Hits	326	Shared Neighborhood Hits	302
SwissProt Accessions	Q9HBU1	Gene names	BARX1
Domain Architecture
Description	Homeobox protein BarH-like 1.

HXD11_MOUSE
NC score	0.907240 (rank : 77)	θ value	7.09661e-13 (rank : 80)
Query Neighborhood Hits	493	Target Neighborhood Hits	376	Shared Neighborhood Hits	312
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HXB9_HUMAN
NC score	0.906660 (rank : 78)	θ value	1.80466e-16 (rank : 45)
Query Neighborhood Hits	493	Target Neighborhood Hits	344	Shared Neighborhood Hits	316
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

BARX1_MOUSE
NC score	0.905394 (rank : 79)	θ value	1.02475e-11 (rank : 96)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	302
SwissProt Accessions	Q9ER42, O09066, P70159, Q9ERV2	Gene names	Barx1
Domain Architecture
Description	Homeobox protein BarH-like 1.

EVX2_MOUSE
NC score	0.903319 (rank : 80)	θ value	7.09661e-13 (rank : 77)
Query Neighborhood Hits	493	Target Neighborhood Hits	327	Shared Neighborhood Hits	302
SwissProt Accessions	P49749	Gene names	Evx2, Evx-2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

MSX3_MOUSE
NC score	0.903165 (rank : 81)	θ value	8.67504e-11 (rank : 114)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	304
SwissProt Accessions	P70354, P70246, Q03360, Q80W10	Gene names	Msx3, Msx-3
Domain Architecture
Description	Homeobox protein MSX-3.

EVX2_HUMAN
NC score	0.903050 (rank : 82)	θ value	7.09661e-13 (rank : 76)
Query Neighborhood Hits	493	Target Neighborhood Hits	325	Shared Neighborhood Hits	301
SwissProt Accessions	Q03828	Gene names	EVX2
Domain Architecture
Description	Homeobox even-skipped homolog protein 2 (EVX-2).

HXC11_HUMAN
NC score	0.902825 (rank : 83)	θ value	9.26847e-13 (rank : 81)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	308
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

HXC8_MOUSE
NC score	0.902390 (rank : 84)	θ value	4.91457e-14 (rank : 69)
Query Neighborhood Hits	493	Target Neighborhood Hits	327	Shared Neighborhood Hits	304
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC8_HUMAN
NC score	0.902339 (rank : 85)	θ value	4.91457e-14 (rank : 68)
Query Neighborhood Hits	493	Target Neighborhood Hits	327	Shared Neighborhood Hits	304
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXA11_HUMAN
NC score	0.901657 (rank : 86)	θ value	6.00763e-12 (rank : 92)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	300
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

NKX31_HUMAN
NC score	0.901628 (rank : 87)	θ value	6.64225e-11 (rank : 111)
Query Neighborhood Hits	493	Target Neighborhood Hits	331	Shared Neighborhood Hits	302
SwissProt Accessions	Q99801, O15465, Q9H2P4, Q9H2P5, Q9H2P6, Q9H2P7, Q9HBG0	Gene names	NKX3-1, NKX3.1, NKX3A
Domain Architecture
Description	Homeobox protein Nkx-3.1.

EVX1_MOUSE
NC score	0.901626 (rank : 88)	θ value	1.58096e-12 (rank : 85)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	304
SwissProt Accessions	P23683	Gene names	Evx1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

BARX2_MOUSE
NC score	0.901072 (rank : 89)	θ value	1.133e-10 (rank : 116)
Query Neighborhood Hits	493	Target Neighborhood Hits	335	Shared Neighborhood Hits	303
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

HXC9_MOUSE
NC score	0.900037 (rank : 90)	θ value	1.99529e-15 (rank : 60)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	311
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXC9_HUMAN
NC score	0.899887 (rank : 91)	θ value	1.99529e-15 (rank : 59)
Query Neighborhood Hits	493	Target Neighborhood Hits	339	Shared Neighborhood Hits	311
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXA11_MOUSE
NC score	0.899386 (rank : 92)	θ value	1.2105e-12 (rank : 83)
Query Neighborhood Hits	493	Target Neighborhood Hits	327	Shared Neighborhood Hits	298
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

HXA10_HUMAN
NC score	0.899162 (rank : 93)	θ value	7.09661e-13 (rank : 78)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	299
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXD12_MOUSE
NC score	0.898858 (rank : 94)	θ value	4.59992e-12 (rank : 89)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	304
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

NKX32_HUMAN
NC score	0.898564 (rank : 95)	θ value	1.02475e-11 (rank : 100)
Query Neighborhood Hits	493	Target Neighborhood Hits	323	Shared Neighborhood Hits	303
SwissProt Accessions	P78367	Gene names	BAPX1, NKX3B
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

VAX2_HUMAN
NC score	0.898080 (rank : 96)	θ value	1.02475e-11 (rank : 104)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	304
SwissProt Accessions	Q9UIW0	Gene names	VAX2
Domain Architecture
Description	Ventral anterior homeobox 2.

EVX1_HUMAN
NC score	0.898060 (rank : 97)	θ value	1.58096e-12 (rank : 84)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	305
SwissProt Accessions	P49640	Gene names	EVX1
Domain Architecture
Description	Homeobox even-skipped homolog protein 1 (EVX-1).

HXA10_MOUSE
NC score	0.897720 (rank : 98)	θ value	5.43371e-13 (rank : 75)
Query Neighborhood Hits	493	Target Neighborhood Hits	365	Shared Neighborhood Hits	308
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

NKX31_MOUSE
NC score	0.897602 (rank : 99)	θ value	3.89403e-11 (rank : 107)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	305
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

VAX1_HUMAN
NC score	0.897548 (rank : 100)	θ value	1.02475e-11 (rank : 102)
Query Neighborhood Hits	493	Target Neighborhood Hits	355	Shared Neighborhood Hits	311
SwissProt Accessions	Q5SQQ9, Q6ZSX0	Gene names	VAX1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

VAX2_MOUSE
NC score	0.897418 (rank : 101)	θ value	1.02475e-11 (rank : 105)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	304
SwissProt Accessions	Q9WTP9	Gene names	Vax2, Vex
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 2 (Ventral retina homeodomain protein).

HXC12_HUMAN
NC score	0.897408 (rank : 102)	θ value	1.02475e-11 (rank : 97)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	299
SwissProt Accessions	P31275, Q9BXJ6	Gene names	HOXC12, HOX3F
Domain Architecture
Description	Homeobox protein Hox-C12 (Hox-3F).

BARX2_HUMAN
NC score	0.897061 (rank : 103)	θ value	1.133e-10 (rank : 115)
Query Neighborhood Hits	493	Target Neighborhood Hits	387	Shared Neighborhood Hits	307
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

VAX1_MOUSE
NC score	0.896990 (rank : 104)	θ value	1.02475e-11 (rank : 103)
Query Neighborhood Hits	493	Target Neighborhood Hits	351	Shared Neighborhood Hits	309
SwissProt Accessions	Q2NKI2, O88880	Gene names	Vax1
Domain Architecture	No domain graphic available
Description	Ventral anterior homeobox 1.

NKX32_MOUSE
NC score	0.896802 (rank : 105)	θ value	1.02475e-11 (rank : 101)
Query Neighborhood Hits	493	Target Neighborhood Hits	326	Shared Neighborhood Hits	303
SwissProt Accessions	P97503	Gene names	Bapx1, Nkx-3.2, Nkx3-2, Nkx3b
Domain Architecture
Description	Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1).

HME2_HUMAN
NC score	0.896541 (rank : 106)	θ value	5.08577e-11 (rank : 108)
Query Neighborhood Hits	493	Target Neighborhood Hits	355	Shared Neighborhood Hits	315
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HHEX_MOUSE
NC score	0.896278 (rank : 107)	θ value	3.29651e-10 (rank : 128)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	307
SwissProt Accessions	P43120	Gene names	Hhex, Prhx
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HXC12_MOUSE
NC score	0.896089 (rank : 108)	θ value	1.74796e-11 (rank : 106)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	299
SwissProt Accessions	Q8K5B8	Gene names	Hoxc12, Hox-3.8, Hoxc-12
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C12 (Hox-3.8).

HME2_MOUSE
NC score	0.895168 (rank : 109)	θ value	5.08577e-11 (rank : 109)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	312
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

HXC10_HUMAN
NC score	0.895153 (rank : 110)	θ value	6.41864e-14 (rank : 70)
Query Neighborhood Hits	493	Target Neighborhood Hits	417	Shared Neighborhood Hits	305
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HHEX_HUMAN
NC score	0.894554 (rank : 111)	θ value	3.29651e-10 (rank : 127)
Query Neighborhood Hits	493	Target Neighborhood Hits	358	Shared Neighborhood Hits	305
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

EMX1_HUMAN
NC score	0.894308 (rank : 112)	θ value	6.64225e-11 (rank : 110)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	313
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

HXC10_MOUSE
NC score	0.893985 (rank : 113)	θ value	1.09485e-13 (rank : 72)
Query Neighborhood Hits	493	Target Neighborhood Hits	417	Shared Neighborhood Hits	305
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXD10_HUMAN
NC score	0.893646 (rank : 114)	θ value	1.86753e-13 (rank : 73)
Query Neighborhood Hits	493	Target Neighborhood Hits	392	Shared Neighborhood Hits	315
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

HXD10_MOUSE
NC score	0.893411 (rank : 115)	θ value	1.86753e-13 (rank : 74)
Query Neighborhood Hits	493	Target Neighborhood Hits	392	Shared Neighborhood Hits	315
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HME1_HUMAN
NC score	0.891224 (rank : 116)	θ value	8.67504e-11 (rank : 112)
Query Neighborhood Hits	493	Target Neighborhood Hits	384	Shared Neighborhood Hits	313
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HME1_MOUSE
NC score	0.890771 (rank : 117)	θ value	8.67504e-11 (rank : 113)
Query Neighborhood Hits	493	Target Neighborhood Hits	397	Shared Neighborhood Hits	312
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

HMX2_MOUSE
NC score	0.889408 (rank : 118)	θ value	1.25267e-09 (rank : 149)
Query Neighborhood Hits	493	Target Neighborhood Hits	354	Shared Neighborhood Hits	316
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

EMX2_HUMAN
NC score	0.888636 (rank : 119)	θ value	9.59137e-10 (rank : 140)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	315
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_MOUSE
NC score	0.888225 (rank : 120)	θ value	9.59137e-10 (rank : 141)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	315
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HMX3_MOUSE
NC score	0.886175 (rank : 121)	θ value	4.76016e-09 (rank : 172)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	310
SwissProt Accessions	P42581	Gene names	Hmx3, Nkx-5.1, Nkx5-1
Domain Architecture
Description	Homeobox protein HMX3 (Homeobox protein Nkx-5.1).

MSX1_MOUSE
NC score	0.885995 (rank : 122)	θ value	5.62301e-10 (rank : 137)
Query Neighborhood Hits	493	Target Neighborhood Hits	322	Shared Neighborhood Hits	306
SwissProt Accessions	P13297	Gene names	Msx1, Hox7, Hox7.1
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7) (Hox- 7.1).

LBX1_MOUSE
NC score	0.885599 (rank : 123)	θ value	1.80886e-08 (rank : 183)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	309
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

MSX1_HUMAN
NC score	0.885060 (rank : 124)	θ value	5.62301e-10 (rank : 136)
Query Neighborhood Hits	493	Target Neighborhood Hits	374	Shared Neighborhood Hits	320
SwissProt Accessions	P28360, Q96NY4	Gene names	MSX1, HOX7
Domain Architecture
Description	Homeobox protein MSX-1 (Msh homeobox 1-like protein) (Hox-7).

NKX28_HUMAN
NC score	0.883220 (rank : 125)	θ value	3.29651e-10 (rank : 130)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	316
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

DBX1_MOUSE
NC score	0.883046 (rank : 126)	θ value	2.36244e-08 (rank : 184)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	307
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

MSX2_HUMAN
NC score	0.882609 (rank : 127)	θ value	4.30538e-10 (rank : 132)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	306
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

BARH1_HUMAN
NC score	0.882157 (rank : 128)	θ value	2.52405e-10 (rank : 123)
Query Neighborhood Hits	493	Target Neighborhood Hits	373	Shared Neighborhood Hits	317
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARH1_MOUSE
NC score	0.881428 (rank : 129)	θ value	2.52405e-10 (rank : 124)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	313
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

LBX1_HUMAN
NC score	0.881122 (rank : 130)	θ value	8.97725e-08 (rank : 193)
Query Neighborhood Hits	493	Target Neighborhood Hits	357	Shared Neighborhood Hits	312
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

MSX2_MOUSE
NC score	0.880732 (rank : 131)	θ value	2.52405e-10 (rank : 125)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	306
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

NKX28_MOUSE
NC score	0.877273 (rank : 132)	θ value	5.62301e-10 (rank : 139)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	314
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

NKX61_HUMAN
NC score	0.876365 (rank : 133)	θ value	2.36244e-08 (rank : 185)
Query Neighborhood Hits	493	Target Neighborhood Hits	431	Shared Neighborhood Hits	319
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

DLX6_HUMAN
NC score	0.875747 (rank : 134)	θ value	8.11959e-09 (rank : 180)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	316
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

NKX61_MOUSE
NC score	0.874889 (rank : 135)	θ value	2.36244e-08 (rank : 186)
Query Neighborhood Hits	493	Target Neighborhood Hits	439	Shared Neighborhood Hits	318
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

HLX1_HUMAN
NC score	0.873790 (rank : 136)	θ value	9.59137e-10 (rank : 142)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	301
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

BARH2_MOUSE
NC score	0.873756 (rank : 137)	θ value	1.25267e-09 (rank : 148)
Query Neighborhood Hits	493	Target Neighborhood Hits	397	Shared Neighborhood Hits	316
SwissProt Accessions	Q8VIB5, Q66L43	Gene names	Barhl2, Barh1, Mbh1
Domain Architecture	No domain graphic available
Description	BarH-like 2 homeobox protein (Bar-class homeodomain protein MBH1) (Homeobox protein B-H1).

TLX1_HUMAN
NC score	0.873459 (rank : 138)	θ value	1.25267e-09 (rank : 155)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	317
SwissProt Accessions	P31314, O75699, Q9HCA0	Gene names	TLX1, HOX11, TCL3
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (TCL-3 proto-oncogene).

DLX2_HUMAN
NC score	0.873411 (rank : 139)	θ value	4.30538e-10 (rank : 131)
Query Neighborhood Hits	493	Target Neighborhood Hits	355	Shared Neighborhood Hits	316
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

DLX2_MOUSE
NC score	0.873237 (rank : 140)	θ value	5.62301e-10 (rank : 135)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	316
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

DLX1_HUMAN
NC score	0.873085 (rank : 141)	θ value	5.62301e-10 (rank : 133)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	316
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_MOUSE
NC score	0.872965 (rank : 142)	θ value	5.62301e-10 (rank : 134)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	316
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

BARH2_HUMAN
NC score	0.872840 (rank : 143)	θ value	1.25267e-09 (rank : 147)
Query Neighborhood Hits	493	Target Neighborhood Hits	419	Shared Neighborhood Hits	315
SwissProt Accessions	Q9NY43, Q7Z4N7	Gene names	BARHL2
Domain Architecture
Description	BarH-like 2 homeobox protein.

TLX1_MOUSE
NC score	0.871642 (rank : 144)	θ value	1.25267e-09 (rank : 156)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	317
SwissProt Accessions	P43345	Gene names	Tlx1, Hox11, Tlx-1
Domain Architecture
Description	T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Homeobox TLX-1).

NKX26_MOUSE
NC score	0.871442 (rank : 145)	θ value	2.79066e-09 (rank : 166)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	308
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

HLX1_MOUSE
NC score	0.871194 (rank : 146)	θ value	4.76016e-09 (rank : 171)
Query Neighborhood Hits	493	Target Neighborhood Hits	362	Shared Neighborhood Hits	297
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

DLX4_HUMAN
NC score	0.870680 (rank : 147)	θ value	1.63604e-09 (rank : 157)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	306
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

DLX4_MOUSE
NC score	0.870097 (rank : 148)	θ value	1.63604e-09 (rank : 158)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	307
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

TLX2_MOUSE
NC score	0.869849 (rank : 149)	θ value	8.97725e-08 (rank : 196)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	309
SwissProt Accessions	Q61663	Gene names	Tlx2, Hox11l1, Tlx1l1
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F).

NKX25_HUMAN
NC score	0.869683 (rank : 150)	θ value	1.63604e-09 (rank : 160)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	312
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX23_HUMAN
NC score	0.869352 (rank : 151)	θ value	9.59137e-10 (rank : 146)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	313
SwissProt Accessions	Q8TAU0, Q9NYS6	Gene names	NKX2-3, NKX23, NKX2C
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C).

TLX2_HUMAN
NC score	0.869202 (rank : 152)	θ value	8.97725e-08 (rank : 195)
Query Neighborhood Hits	493	Target Neighborhood Hits	352	Shared Neighborhood Hits	317
SwissProt Accessions	O43763, Q9UQ48	Gene names	TLX2, HOX11L1, NCX
Domain Architecture
Description	T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Neural crest homeobox protein).

HXA13_MOUSE
NC score	0.868023 (rank : 153)	θ value	9.59137e-10 (rank : 144)
Query Neighborhood Hits	493	Target Neighborhood Hits	351	Shared Neighborhood Hits	310
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

NKX25_MOUSE
NC score	0.867403 (rank : 154)	θ value	1.63604e-09 (rank : 161)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	314
SwissProt Accessions	P42582, P97335	Gene names	Nkx2-5, Csx, Nkx-2.5, Nkx2e
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX23_MOUSE
NC score	0.867296 (rank : 155)	θ value	5.62301e-10 (rank : 138)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	310
SwissProt Accessions	P97334, Q9QZ60, Q9WV67	Gene names	Nkx2-3, Nkx-2.3, Nkx2c
Domain Architecture
Description	Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3).

TLX3_HUMAN
NC score	0.867192 (rank : 156)	θ value	4.76016e-09 (rank : 175)
Query Neighborhood Hits	493	Target Neighborhood Hits	403	Shared Neighborhood Hits	350
SwissProt Accessions	O43711, Q96AD3	Gene names	TLX3, HOX11L2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2).

HXA13_HUMAN
NC score	0.867047 (rank : 157)	θ value	9.59137e-10 (rank : 143)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	310
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

DLX3_MOUSE
NC score	0.866218 (rank : 158)	θ value	3.29651e-10 (rank : 126)
Query Neighborhood Hits	493	Target Neighborhood Hits	367	Shared Neighborhood Hits	320
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

TLX3_MOUSE
NC score	0.866146 (rank : 159)	θ value	4.76016e-09 (rank : 176)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	315
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

DLX3_HUMAN
NC score	0.865436 (rank : 160)	θ value	1.47974e-10 (rank : 120)
Query Neighborhood Hits	493	Target Neighborhood Hits	369	Shared Neighborhood Hits	323
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

NKX22_HUMAN
NC score	0.863256 (rank : 161)	θ value	3.29651e-10 (rank : 129)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	312
SwissProt Accessions	O95096	Gene names	NKX2-2, NKX2.2, NKX2B
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

NKX24_MOUSE
NC score	0.862378 (rank : 162)	θ value	1.25267e-09 (rank : 150)
Query Neighborhood Hits	493	Target Neighborhood Hits	356	Shared Neighborhood Hits	312
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX22_MOUSE
NC score	0.860392 (rank : 163)	θ value	9.59137e-10 (rank : 145)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	309
SwissProt Accessions	P42586	Gene names	Nkx2-2, Nkx-2.2, Nkx2b
Domain Architecture
Description	Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B).

DLX5_HUMAN
NC score	0.859741 (rank : 164)	θ value	1.9326e-10 (rank : 122)
Query Neighborhood Hits	493	Target Neighborhood Hits	405	Shared Neighborhood Hits	326
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX5_MOUSE
NC score	0.859300 (rank : 165)	θ value	1.47974e-10 (rank : 121)
Query Neighborhood Hits	493	Target Neighborhood Hits	434	Shared Neighborhood Hits	333
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

NKX24_HUMAN
NC score	0.858070 (rank : 166)	θ value	1.63604e-09 (rank : 159)
Query Neighborhood Hits	493	Target Neighborhood Hits	366	Shared Neighborhood Hits	312
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

TITF1_MOUSE
NC score	0.856661 (rank : 167)	θ value	1.25267e-09 (rank : 154)
Query Neighborhood Hits	493	Target Neighborhood Hits	335	Shared Neighborhood Hits	310
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

TITF1_HUMAN
NC score	0.854433 (rank : 168)	θ value	1.25267e-09 (rank : 153)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	310
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

HXC13_HUMAN
NC score	0.853826 (rank : 169)	θ value	3.64472e-09 (rank : 167)
Query Neighborhood Hits	493	Target Neighborhood Hits	336	Shared Neighborhood Hits	308
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
NC score	0.853692 (rank : 170)	θ value	3.64472e-09 (rank : 168)
Query Neighborhood Hits	493	Target Neighborhood Hits	337	Shared Neighborhood Hits	308
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

HXB13_MOUSE
NC score	0.851930 (rank : 171)	θ value	6.21693e-09 (rank : 177)
Query Neighborhood Hits	493	Target Neighborhood Hits	384	Shared Neighborhood Hits	318
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXB13_HUMAN
NC score	0.850732 (rank : 172)	θ value	4.76016e-09 (rank : 173)
Query Neighborhood Hits	493	Target Neighborhood Hits	377	Shared Neighborhood Hits	321
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXD13_HUMAN
NC score	0.850372 (rank : 173)	θ value	6.21693e-09 (rank : 178)
Query Neighborhood Hits	493	Target Neighborhood Hits	332	Shared Neighborhood Hits	303
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
NC score	0.850134 (rank : 174)	θ value	6.21693e-09 (rank : 179)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	303
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

PITX3_MOUSE
NC score	0.833761 (rank : 175)	θ value	2.13673e-09 (rank : 165)
Query Neighborhood Hits	493	Target Neighborhood Hits	380	Shared Neighborhood Hits	314
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

ARX_HUMAN
NC score	0.832652 (rank : 176)	θ value	1.47974e-10 (rank : 118)
Query Neighborhood Hits	493	Target Neighborhood Hits	401	Shared Neighborhood Hits	311
SwissProt Accessions	Q96QS3	Gene names	ARX
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

HESX1_MOUSE
NC score	0.832643 (rank : 177)	θ value	1.29631e-06 (rank : 208)
Query Neighborhood Hits	493	Target Neighborhood Hits	331	Shared Neighborhood Hits	301
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

HESX1_HUMAN
NC score	0.832093 (rank : 178)	θ value	1.29631e-06 (rank : 207)
Query Neighborhood Hits	493	Target Neighborhood Hits	326	Shared Neighborhood Hits	302
SwissProt Accessions	Q9UBX0, Q99667	Gene names	HESX1, HANF
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (hAnf).

PITX3_HUMAN
NC score	0.831427 (rank : 179)	θ value	1.25267e-09 (rank : 152)
Query Neighborhood Hits	493	Target Neighborhood Hits	366	Shared Neighborhood Hits	313
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

ARX_MOUSE
NC score	0.830864 (rank : 180)	θ value	1.47974e-10 (rank : 119)
Query Neighborhood Hits	493	Target Neighborhood Hits	398	Shared Neighborhood Hits	308
SwissProt Accessions	O35085, Q9QYT4	Gene names	Arx
Domain Architecture
Description	Homeobox protein ARX (Aristaless-related homeobox).

ESX1L_HUMAN
NC score	0.830381 (rank : 181)	θ value	5.26297e-08 (rank : 192)
Query Neighborhood Hits	493	Target Neighborhood Hits	498	Shared Neighborhood Hits	313
SwissProt Accessions	Q8N693, Q7Z6K7	Gene names	ESX1L, ESX1R
Domain Architecture
Description	Extraembryonic, spermatogenesis, homeobox 1-like protein.

RX_MOUSE
NC score	0.827924 (rank : 182)	θ value	2.61198e-07 (rank : 199)
Query Neighborhood Hits	493	Target Neighborhood Hits	429	Shared Neighborhood Hits	323
SwissProt Accessions	O35602, O08748	Gene names	Rax, Rx
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

PITX1_HUMAN
NC score	0.827525 (rank : 183)	θ value	4.76016e-09 (rank : 174)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	315
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

RX_HUMAN
NC score	0.827164 (rank : 184)	θ value	3.08544e-08 (rank : 187)
Query Neighborhood Hits	493	Target Neighborhood Hits	423	Shared Neighborhood Hits	320
SwissProt Accessions	Q9Y2V3	Gene names	RAX, RX
Domain Architecture
Description	Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein).

OTP_MOUSE
NC score	0.826734 (rank : 185)	θ value	8.97725e-08 (rank : 194)
Query Neighborhood Hits	493	Target Neighborhood Hits	387	Shared Neighborhood Hits	321
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

PEPP2_HUMAN
NC score	0.825807 (rank : 186)	θ value	3.19293e-05 (rank : 228)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	288
SwissProt Accessions	Q9BQY4, Q9BR00	Gene names	PEPP2, THG1
Domain Architecture
Description	Paired-like homeobox protein PEPP-2 (Testis homeobox gene 1).

PITX1_MOUSE
NC score	0.825436 (rank : 187)	θ value	2.13673e-09 (rank : 163)
Query Neighborhood Hits	493	Target Neighborhood Hits	362	Shared Neighborhood Hits	317
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

PITX2_MOUSE
NC score	0.824126 (rank : 188)	θ value	2.13673e-09 (rank : 164)
Query Neighborhood Hits	493	Target Neighborhood Hits	383	Shared Neighborhood Hits	316
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

PITX2_HUMAN
NC score	0.823276 (rank : 189)	θ value	3.64472e-09 (rank : 170)
Query Neighborhood Hits	493	Target Neighborhood Hits	381	Shared Neighborhood Hits	314
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PHX2A_HUMAN
NC score	0.821922 (rank : 190)	θ value	4.0297e-08 (rank : 188)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	309
SwissProt Accessions	O14813, Q8IVZ2	Gene names	PHOX2A, ARIX, PMX2A
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (Aristaless homeobox protein homolog) (ARIX1 homeodomain protein).

PHX2A_MOUSE
NC score	0.820197 (rank : 191)	θ value	4.0297e-08 (rank : 189)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	306
SwissProt Accessions	Q62066	Gene names	Phox2a, Arix, Phox2, Pmx2, Pmx2a
Domain Architecture
Description	Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog).

PEPP1_HUMAN
NC score	0.817218 (rank : 192)	θ value	4.1701e-05 (rank : 229)
Query Neighborhood Hits	493	Target Neighborhood Hits	338	Shared Neighborhood Hits	304
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

PHX2B_HUMAN
NC score	0.805135 (rank : 193)	θ value	4.0297e-08 (rank : 190)
Query Neighborhood Hits	493	Target Neighborhood Hits	407	Shared Neighborhood Hits	327
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
NC score	0.805135 (rank : 194)	θ value	4.0297e-08 (rank : 191)
Query Neighborhood Hits	493	Target Neighborhood Hits	407	Shared Neighborhood Hits	327
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

ALX4_MOUSE
NC score	0.802544 (rank : 195)	θ value	3.41135e-07 (rank : 201)
Query Neighborhood Hits	493	Target Neighborhood Hits	369	Shared Neighborhood Hits	319
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

SHOX2_HUMAN
NC score	0.801337 (rank : 196)	θ value	4.92598e-06 (rank : 214)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	303
SwissProt Accessions	O60902, O60465, O60467, O60903	Gene names	SHOX2, OG12X, SHOT
Domain Architecture
Description	Short stature homeobox protein 2 (Paired-related homeobox protein SHOT) (Homeobox protein Og12X).

SHOX2_MOUSE
NC score	0.801197 (rank : 197)	θ value	4.92598e-06 (rank : 215)
Query Neighborhood Hits	493	Target Neighborhood Hits	348	Shared Neighborhood Hits	303
SwissProt Accessions	P70390, P70369	Gene names	Shox2, Og12x, Prx3
Domain Architecture
Description	Short stature homeobox protein 2 (Homeobox protein Og12X) (OG-12) (Paired family homeodomain protein Prx3).

ALX4_HUMAN
NC score	0.800667 (rank : 198)	θ value	3.41135e-07 (rank : 200)
Query Neighborhood Hits	493	Target Neighborhood Hits	394	Shared Neighborhood Hits	322
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

PRRXL_MOUSE
NC score	0.800559 (rank : 199)	θ value	1.43324e-05 (rank : 223)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	314
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

SHOX_HUMAN
NC score	0.799439 (rank : 200)	θ value	4.92598e-06 (rank : 216)
Query Neighborhood Hits	493	Target Neighborhood Hits	363	Shared Neighborhood Hits	303
SwissProt Accessions	O15266, O00412, O00413, O15267	Gene names	SHOX, PHOG
Domain Architecture
Description	Short stature homeobox protein (Short stature homeobox-containing protein) (Pseudoautosomal homeobox-containing osteogenic protein).

PROP1_HUMAN
NC score	0.797894 (rank : 201)	θ value	4.45536e-07 (rank : 204)
Query Neighborhood Hits	493	Target Neighborhood Hits	354	Shared Neighborhood Hits	312
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

GSCL_HUMAN
NC score	0.795285 (rank : 202)	θ value	3.19293e-05 (rank : 224)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	304
SwissProt Accessions	O15499	Gene names	GSCL
Domain Architecture
Description	Homeobox protein goosecoid-like (GSC-2).

GSC_HUMAN
NC score	0.791394 (rank : 203)	θ value	9.29e-05 (rank : 235)
Query Neighborhood Hits	493	Target Neighborhood Hits	369	Shared Neighborhood Hits	322
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

GSC_MOUSE
NC score	0.790548 (rank : 204)	θ value	9.29e-05 (rank : 236)
Query Neighborhood Hits	493	Target Neighborhood Hits	368	Shared Neighborhood Hits	319
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

CART1_HUMAN
NC score	0.789190 (rank : 205)	θ value	4.45536e-07 (rank : 202)
Query Neighborhood Hits	493	Target Neighborhood Hits	348	Shared Neighborhood Hits	315
SwissProt Accessions	Q15699, Q546C8, Q96FH4	Gene names	CART1
Domain Architecture
Description	Cartilage homeoprotein 1 (CART-1).

CART1_MOUSE
NC score	0.789043 (rank : 206)	θ value	4.45536e-07 (rank : 203)
Query Neighborhood Hits	493	Target Neighborhood Hits	344	Shared Neighborhood Hits	315
SwissProt Accessions	Q8C8B0, Q8C370	Gene names	Cart1
Domain Architecture	No domain graphic available
Description	Cartilage homeoprotein 1 (CART-1).

PRRX2_HUMAN
NC score	0.787797 (rank : 207)	θ value	1.17247e-07 (rank : 197)
Query Neighborhood Hits	493	Target Neighborhood Hits	348	Shared Neighborhood Hits	311
SwissProt Accessions	Q99811, Q9UIB3	Gene names	PRRX2, PMX2, PRX2
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Paired-related homeobox protein 2).

PROP1_MOUSE
NC score	0.785773 (rank : 208)	θ value	1.06045e-08 (rank : 182)
Query Neighborhood Hits	493	Target Neighborhood Hits	361	Shared Neighborhood Hits	311
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PRRX2_MOUSE
NC score	0.782771 (rank : 209)	θ value	1.99992e-07 (rank : 198)
Query Neighborhood Hits	493	Target Neighborhood Hits	351	Shared Neighborhood Hits	312
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

ALX3_HUMAN
NC score	0.780260 (rank : 210)	θ value	1.43324e-05 (rank : 222)
Query Neighborhood Hits	493	Target Neighborhood Hits	380	Shared Neighborhood Hits	321
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX3_MOUSE
NC score	0.780038 (rank : 211)	θ value	2.21117e-06 (rank : 209)
Query Neighborhood Hits	493	Target Neighborhood Hits	386	Shared Neighborhood Hits	325
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

OTX1_HUMAN
NC score	0.778650 (rank : 212)	θ value	1.25267e-09 (rank : 151)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	307
SwissProt Accessions	P32242, Q53TG6	Gene names	OTX1
Domain Architecture
Description	Homeobox protein OTX1.

CRX_HUMAN
NC score	0.778439 (rank : 213)	θ value	1.09739e-05 (rank : 221)
Query Neighborhood Hits	493	Target Neighborhood Hits	360	Shared Neighborhood Hits	311
SwissProt Accessions	O43186	Gene names	CRX, CORD2
Domain Architecture
Description	Cone-rod homeobox protein.

CHX10_MOUSE
NC score	0.776257 (rank : 214)	θ value	2.88788e-06 (rank : 211)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	307
SwissProt Accessions	Q61412	Gene names	Chx10, Vsx2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

CHX10_HUMAN
NC score	0.775941 (rank : 215)	θ value	2.88788e-06 (rank : 210)
Query Neighborhood Hits	493	Target Neighborhood Hits	340	Shared Neighborhood Hits	307
SwissProt Accessions	P58304	Gene names	CHX10, VSX2
Domain Architecture
Description	Homeobox protein CHX10 (Ceh-10 homeodomain-containing homolog).

GSCL_MOUSE
NC score	0.775054 (rank : 216)	θ value	0.000461057 (rank : 245)
Query Neighborhood Hits	493	Target Neighborhood Hits	339	Shared Neighborhood Hits	306
SwissProt Accessions	P56916	Gene names	Gscl
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid-like (GSC-2).

OTX1_MOUSE
NC score	0.773086 (rank : 217)	θ value	3.64472e-09 (rank : 169)
Query Neighborhood Hits	493	Target Neighborhood Hits	372	Shared Neighborhood Hits	308
SwissProt Accessions	P80205	Gene names	Otx1, Otx-1
Domain Architecture
Description	Homeobox protein OTX1.

CRX_MOUSE
NC score	0.772667 (rank : 218)	θ value	7.1131e-05 (rank : 232)
Query Neighborhood Hits	493	Target Neighborhood Hits	359	Shared Neighborhood Hits	307
SwissProt Accessions	O54751	Gene names	Crx
Domain Architecture
Description	Cone-rod homeobox protein.

VSX1_MOUSE
NC score	0.769395 (rank : 219)	θ value	4.92598e-06 (rank : 218)
Query Neighborhood Hits	493	Target Neighborhood Hits	356	Shared Neighborhood Hits	305
SwissProt Accessions	Q91V10	Gene names	Vsx1, Rinx
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

PRRX1_MOUSE
NC score	0.769044 (rank : 220)	θ value	9.92553e-07 (rank : 206)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	312
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

PRRX1_HUMAN
NC score	0.768890 (rank : 221)	θ value	9.92553e-07 (rank : 205)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	312
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

VSX1_HUMAN
NC score	0.767496 (rank : 222)	θ value	4.92598e-06 (rank : 217)
Query Neighborhood Hits	493	Target Neighborhood Hits	344	Shared Neighborhood Hits	310
SwissProt Accessions	Q9NZR4, Q5TF40, Q5TF41, Q9HCU3, Q9NU27	Gene names	VSX1, RINX
Domain Architecture
Description	Visual system homeobox 1 (Transcription factor VSX1) (Retinal inner nuclear layer homeobox protein) (Homeodomain protein RINX).

OTX2_MOUSE
NC score	0.750587 (rank : 223)	θ value	3.19293e-05 (rank : 227)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	306
SwissProt Accessions	P80206	Gene names	Otx2, Otx-2
Domain Architecture
Description	Homeobox protein OTX2.

OTX2_HUMAN
NC score	0.750112 (rank : 224)	θ value	3.19293e-05 (rank : 226)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	304
SwissProt Accessions	P32243, Q6GTV3, Q9HAW3, Q9P2R1	Gene names	OTX2
Domain Architecture
Description	Homeobox protein OTX2.

DUX1_HUMAN
NC score	0.728195 (rank : 225)	θ value	0.000602161 (rank : 247)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	302
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX5_HUMAN
NC score	0.723658 (rank : 226)	θ value	0.000602161 (rank : 248)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	302
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

DUX3_HUMAN
NC score	0.721808 (rank : 227)	θ value	0.00035302 (rank : 243)
Query Neighborhood Hits	493	Target Neighborhood Hits	312	Shared Neighborhood Hits	288
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

PAX4_HUMAN
NC score	0.711787 (rank : 228)	θ value	4.92598e-06 (rank : 213)
Query Neighborhood Hits	493	Target Neighborhood Hits	367	Shared Neighborhood Hits	319
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

PAX4_MOUSE
NC score	0.709249 (rank : 229)	θ value	2.88788e-06 (rank : 212)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	318
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

DUX4_HUMAN
NC score	0.708071 (rank : 230)	θ value	0.000121331 (rank : 239)
Query Neighborhood Hits	493	Target Neighborhood Hits	403	Shared Neighborhood Hits	316
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

PAX7_HUMAN
NC score	0.707580 (rank : 231)	θ value	1.63604e-09 (rank : 162)
Query Neighborhood Hits	493	Target Neighborhood Hits	456	Shared Neighborhood Hits	334
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
NC score	0.705711 (rank : 232)	θ value	8.11959e-09 (rank : 181)
Query Neighborhood Hits	493	Target Neighborhood Hits	422	Shared Neighborhood Hits	326
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PAX3_MOUSE
NC score	0.705599 (rank : 233)	θ value	4.59992e-12 (rank : 91)
Query Neighborhood Hits	493	Target Neighborhood Hits	478	Shared Neighborhood Hits	327
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

PAX3_HUMAN
NC score	0.704788 (rank : 234)	θ value	4.59992e-12 (rank : 90)
Query Neighborhood Hits	493	Target Neighborhood Hits	513	Shared Neighborhood Hits	332
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PAX6_HUMAN
NC score	0.691888 (rank : 235)	θ value	6.43352e-06 (rank : 219)
Query Neighborhood Hits	493	Target Neighborhood Hits	383	Shared Neighborhood Hits	315
SwissProt Accessions	P26367, Q6N006, Q99413	Gene names	PAX6, AN2
Domain Architecture
Description	Paired box protein Pax-6 (Oculorhombin) (Aniridia type II protein).

PAX6_MOUSE
NC score	0.691888 (rank : 236)	θ value	6.43352e-06 (rank : 220)
Query Neighborhood Hits	493	Target Neighborhood Hits	383	Shared Neighborhood Hits	315
SwissProt Accessions	P63015, P32117, P70601, Q62222, Q64037, Q8CEI5, Q8VDB5, Q921Q8	Gene names	Pax6, Pax-6, Sey
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-6 (Oculorhombin).

ZFHX2_HUMAN
NC score	0.534922 (rank : 237)	θ value	0.00665767 (rank : 257)
Query Neighborhood Hits	493	Target Neighborhood Hits	1178	Shared Neighborhood Hits	339
SwissProt Accessions	Q9C0A1	Gene names	ZFHX2, KIAA1762
Domain Architecture
Description	Zinc finger homeobox protein 2.

LHX2_HUMAN
NC score	0.491558 (rank : 238)	θ value	9.29e-05 (rank : 237)
Query Neighborhood Hits	493	Target Neighborhood Hits	432	Shared Neighborhood Hits	292
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

LHX2_MOUSE
NC score	0.489874 (rank : 239)	θ value	9.29e-05 (rank : 238)
Query Neighborhood Hits	493	Target Neighborhood Hits	431	Shared Neighborhood Hits	292
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

LHX3_HUMAN
NC score	0.488149 (rank : 240)	θ value	0.00020696 (rank : 240)
Query Neighborhood Hits	493	Target Neighborhood Hits	474	Shared Neighborhood Hits	322
SwissProt Accessions	Q9UBR4, Q9NZB5, Q9P0I8, Q9P0I9	Gene names	LHX3
Domain Architecture
Description	LIM/homeobox protein Lhx3.

LHX61_HUMAN
NC score	0.486280 (rank : 241)	θ value	7.1131e-05 (rank : 233)
Query Neighborhood Hits	493	Target Neighborhood Hits	412	Shared Neighborhood Hits	286
SwissProt Accessions	Q9UPM6, Q5T7S8, Q9NTK3, Q9UPM5	Gene names	LHX6, LHX6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1 (Lhx6).

LHX6_MOUSE
NC score	0.485787 (rank : 242)	θ value	0.000461057 (rank : 246)
Query Neighborhood Hits	493	Target Neighborhood Hits	399	Shared Neighborhood Hits	285
SwissProt Accessions	O88706	Gene names	Lhx6
Domain Architecture
Description	LIM/homeobox protein Lhx6.

LMX1A_HUMAN
NC score	0.484878 (rank : 243)	θ value	5.44631e-05 (rank : 230)
Query Neighborhood Hits	493	Target Neighborhood Hits	406	Shared Neighborhood Hits	299
SwissProt Accessions	Q8TE12, Q8TE11	Gene names	LMX1A
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

LHX3_MOUSE
NC score	0.483837 (rank : 244)	θ value	0.00020696 (rank : 241)
Query Neighborhood Hits	493	Target Neighborhood Hits	451	Shared Neighborhood Hits	311
SwissProt Accessions	P50481, Q61800, Q61801	Gene names	Lhx3, Lim-3, Lim3, Plim
Domain Architecture
Description	LIM/homeobox protein Lhx3 (Homeobox protein LIM-3) (Homeobox protein P-LIM) (LIM homeobox protein 3).

LMX1A_MOUSE
NC score	0.483406 (rank : 245)	θ value	3.19293e-05 (rank : 225)
Query Neighborhood Hits	493	Target Neighborhood Hits	405	Shared Neighborhood Hits	298
SwissProt Accessions	Q9JKU8	Gene names	Lmx1a
Domain Architecture
Description	LIM homeobox transcription factor 1 alpha (LIM/homeobox protein LMX1A) (LIM-homeobox protein 1.1) (LMX-1.1).

LHX4_MOUSE
NC score	0.479887 (rank : 246)	θ value	0.000786445 (rank : 250)
Query Neighborhood Hits	493	Target Neighborhood Hits	457	Shared Neighborhood Hits	316
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX4_HUMAN
NC score	0.479748 (rank : 247)	θ value	0.000786445 (rank : 249)
Query Neighborhood Hits	493	Target Neighborhood Hits	455	Shared Neighborhood Hits	316
SwissProt Accessions	Q969G2, Q8NHE0, Q8TCJ1, Q8WWX2, Q969W2	Gene names	LHX4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX5_HUMAN
NC score	0.472787 (rank : 248)	θ value	0.21417 (rank : 302)
Query Neighborhood Hits	493	Target Neighborhood Hits	453	Shared Neighborhood Hits	305
SwissProt Accessions	Q9H2C1	Gene names	LHX5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX5_MOUSE
NC score	0.472581 (rank : 249)	θ value	0.0961366 (rank : 284)
Query Neighborhood Hits	493	Target Neighborhood Hits	456	Shared Neighborhood Hits	306
SwissProt Accessions	P61375, P50459	Gene names	Lhx5
Domain Architecture
Description	LIM/homeobox protein Lhx5.

LHX9_MOUSE
NC score	0.471776 (rank : 250)	θ value	0.000786445 (rank : 252)
Query Neighborhood Hits	493	Target Neighborhood Hits	445	Shared Neighborhood Hits	293
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX9_HUMAN
NC score	0.471347 (rank : 251)	θ value	0.000786445 (rank : 251)
Query Neighborhood Hits	493	Target Neighborhood Hits	444	Shared Neighborhood Hits	293
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX1_MOUSE
NC score	0.467075 (rank : 252)	θ value	0.0193708 (rank : 262)
Query Neighborhood Hits	493	Target Neighborhood Hits	453	Shared Neighborhood Hits	305
SwissProt Accessions	P63006, P36199	Gene names	Lhx1, Lim-1, Lim1
Domain Architecture	No domain graphic available
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LHX1_HUMAN
NC score	0.466280 (rank : 253)	θ value	0.0736092 (rank : 280)
Query Neighborhood Hits	493	Target Neighborhood Hits	453	Shared Neighborhood Hits	305
SwissProt Accessions	P48742, Q3MIW0	Gene names	LHX1, LIM1
Domain Architecture
Description	LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1).

LMX1B_MOUSE
NC score	0.460075 (rank : 254)	θ value	0.00228821 (rank : 255)
Query Neighborhood Hits	493	Target Neighborhood Hits	394	Shared Neighborhood Hits	296
SwissProt Accessions	O88609	Gene names	Lmx1b
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LMX1B_HUMAN
NC score	0.459917 (rank : 255)	θ value	0.00228821 (rank : 254)
Query Neighborhood Hits	493	Target Neighborhood Hits	404	Shared Neighborhood Hits	297
SwissProt Accessions	O60663, O75463	Gene names	LMX1B
Domain Architecture
Description	LIM homeobox transcription factor 1 beta (LIM/homeobox protein LMX1B) (LIM-homeobox protein 1.2) (LMX-1.2).

LHX8_MOUSE
NC score	0.459399 (rank : 256)	θ value	0.00228821 (rank : 253)
Query Neighborhood Hits	493	Target Neighborhood Hits	406	Shared Neighborhood Hits	287
SwissProt Accessions	O35652, O70163, O88707	Gene names	Lhx8, Lhx7
Domain Architecture
Description	LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3).

LHX61_MOUSE
NC score	0.453712 (rank : 257)	θ value	0.000270298 (rank : 242)
Query Neighborhood Hits	493	Target Neighborhood Hits	396	Shared Neighborhood Hits	271
SwissProt Accessions	Q9R1R0, Q9R1R1	Gene names	Lhx6.1
Domain Architecture
Description	LIM/homeobox protein Lhx6.1.

PO6F2_MOUSE
NC score	0.442060 (rank : 258)	θ value	0.21417 (rank : 304)
Query Neighborhood Hits	493	Target Neighborhood Hits	639	Shared Neighborhood Hits	307
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

PO6F2_HUMAN
NC score	0.440421 (rank : 259)	θ value	0.21417 (rank : 303)
Query Neighborhood Hits	493	Target Neighborhood Hits	618	Shared Neighborhood Hits	298
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

DUX2_HUMAN
NC score	0.430126 (rank : 260)	θ value	θ > 10 (rank : 499)
Query Neighborhood Hits	493	Target Neighborhood Hits	173	Shared Neighborhood Hits	163
SwissProt Accessions	O75505	Gene names	DUX2
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 2.

PO6F1_HUMAN
NC score	0.417823 (rank : 261)	θ value	0.813845 (rank : 346)
Query Neighborhood Hits	493	Target Neighborhood Hits	370	Shared Neighborhood Hits	296
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

PO6F1_MOUSE
NC score	0.403970 (rank : 262)	θ value	0.813845 (rank : 347)
Query Neighborhood Hits	493	Target Neighborhood Hits	581	Shared Neighborhood Hits	315
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

PO2F1_HUMAN
NC score	0.388955 (rank : 263)	θ value	0.0563607 (rank : 273)
Query Neighborhood Hits	493	Target Neighborhood Hits	426	Shared Neighborhood Hits	300
SwissProt Accessions	P14859, Q5TBT7, Q6PK46, Q8NEU9, Q9BPV1	Gene names	POU2F1, OCT1, OTF1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

ISL2_HUMAN
NC score	0.386951 (rank : 264)	θ value	0.0330416 (rank : 267)
Query Neighborhood Hits	493	Target Neighborhood Hits	435	Shared Neighborhood Hits	299
SwissProt Accessions	Q96A47	Gene names	ISL2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

PO2F2_MOUSE
NC score	0.386868 (rank : 265)	θ value	0.163984 (rank : 298)
Query Neighborhood Hits	493	Target Neighborhood Hits	353	Shared Neighborhood Hits	291
SwissProt Accessions	Q00196, Q00197, Q00198, Q00199, Q00200, Q00201, Q05882, Q61995, Q61996, Q64245	Gene names	Pou2f2, Oct2, Otf2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

PO2F2_HUMAN
NC score	0.386396 (rank : 266)	θ value	0.47712 (rank : 326)
Query Neighborhood Hits	493	Target Neighborhood Hits	379	Shared Neighborhood Hits	292
SwissProt Accessions	P09086, Q16648, Q9BRS4	Gene names	POU2F2, OCT2, OTF2
Domain Architecture
Description	POU domain, class 2, transcription factor 2 (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2).

ATBF1_HUMAN
NC score	0.385336 (rank : 267)	θ value	9.29e-05 (rank : 234)
Query Neighborhood Hits	493	Target Neighborhood Hits	1547	Shared Neighborhood Hits	326
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ISL2_MOUSE
NC score	0.384999 (rank : 268)	θ value	0.0330416 (rank : 268)
Query Neighborhood Hits	493	Target Neighborhood Hits	426	Shared Neighborhood Hits	291
SwissProt Accessions	Q9CXV0	Gene names	Isl2
Domain Architecture
Description	Insulin gene enhancer protein ISL-2 (Islet-2).

ATBF1_MOUSE
NC score	0.383026 (rank : 269)	θ value	7.1131e-05 (rank : 231)
Query Neighborhood Hits	493	Target Neighborhood Hits	1841	Shared Neighborhood Hits	344
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ISL1_HUMAN
NC score	0.377501 (rank : 270)	θ value	0.125558 (rank : 287)
Query Neighborhood Hits	493	Target Neighborhood Hits	421	Shared Neighborhood Hits	296
SwissProt Accessions	P61371, P20663, P47894	Gene names	ISL1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

ISL1_MOUSE
NC score	0.377501 (rank : 271)	θ value	0.125558 (rank : 288)
Query Neighborhood Hits	493	Target Neighborhood Hits	421	Shared Neighborhood Hits	296
SwissProt Accessions	P61372, P20663, P47894, Q812D8	Gene names	Isl1
Domain Architecture
Description	Insulin gene enhancer protein ISL-1 (Islet-1).

PO2F3_MOUSE
NC score	0.373590 (rank : 272)	θ value	3.0926 (rank : 414)
Query Neighborhood Hits	493	Target Neighborhood Hits	328	Shared Neighborhood Hits	285
SwissProt Accessions	P31362	Gene names	Pou2f3, Epoc1, Oct11, Otf-11, Otf11
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1).

PO2F1_MOUSE
NC score	0.370416 (rank : 273)	θ value	0.279714 (rank : 312)
Query Neighborhood Hits	493	Target Neighborhood Hits	408	Shared Neighborhood Hits	292
SwissProt Accessions	P25425, Q61994, Q63891, Q6Y681, Q7TSD0, Q8BT04, Q8K570, Q99JH0, Q9WTZ4, Q9WTZ5, Q9WTZ6	Gene names	Pou2f1, Oct-1, Otf-1, Otf1
Domain Architecture
Description	POU domain, class 2, transcription factor 1 (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1).

PO2F3_HUMAN
NC score	0.369898 (rank : 274)	θ value	3.0926 (rank : 413)
Query Neighborhood Hits	493	Target Neighborhood Hits	319	Shared Neighborhood Hits	282
SwissProt Accessions	Q9UKI9, Q9UKR7, Q9Y504	Gene names	POU2F3, OTF11, PLA1
Domain Architecture
Description	POU domain, class 2, transcription factor 3 (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein).

PBX2_MOUSE
NC score	0.349871 (rank : 275)	θ value	1.38821 (rank : 369)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	279
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

PBX2_HUMAN
NC score	0.348166 (rank : 276)	θ value	1.38821 (rank : 368)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	283
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PIT1_HUMAN
NC score	0.334205 (rank : 277)	θ value	0.813845 (rank : 344)
Query Neighborhood Hits	493	Target Neighborhood Hits	292	Shared Neighborhood Hits	264
SwissProt Accessions	P28069, O75757, Q15132, Q15133, Q9UEL3	Gene names	POU1F1, GHF1, PIT1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PBX4_MOUSE
NC score	0.332040 (rank : 278)	θ value	1.06291 (rank : 356)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	264
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

PIT1_MOUSE
NC score	0.329322 (rank : 279)	θ value	0.813845 (rank : 345)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	278
SwissProt Accessions	Q00286	Gene names	Pou1f1, Pit-1, Pit1
Domain Architecture
Description	Pituitary-specific positive transcription factor 1 (Pit-1) (Growth hormone factor 1) (GHF-1).

PBX3_MOUSE
NC score	0.329220 (rank : 280)	θ value	0.813845 (rank : 343)
Query Neighborhood Hits	493	Target Neighborhood Hits	306	Shared Neighborhood Hits	264
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_HUMAN
NC score	0.329181 (rank : 281)	θ value	0.813845 (rank : 342)
Query Neighborhood Hits	493	Target Neighborhood Hits	306	Shared Neighborhood Hits	264
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PO4F2_MOUSE
NC score	0.319274 (rank : 282)	θ value	0.365318 (rank : 320)
Query Neighborhood Hits	493	Target Neighborhood Hits	312	Shared Neighborhood Hits	280
SwissProt Accessions	Q63934, Q63954	Gene names	Pou4f2, Brn3b
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2).

PO4F2_HUMAN
NC score	0.318355 (rank : 283)	θ value	0.365318 (rank : 319)
Query Neighborhood Hits	493	Target Neighborhood Hits	310	Shared Neighborhood Hits	280
SwissProt Accessions	Q12837, Q13883, Q14987	Gene names	POU4F2, BRN3B
Domain Architecture
Description	POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B).

PO4F1_MOUSE
NC score	0.315305 (rank : 284)	θ value	3.0926 (rank : 417)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	293
SwissProt Accessions	P17208	Gene names	Pou4f1, Brn-3, Brn3, Brn3a
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0).

PBX1_HUMAN
NC score	0.314872 (rank : 285)	θ value	2.36792 (rank : 392)
Query Neighborhood Hits	493	Target Neighborhood Hits	317	Shared Neighborhood Hits	263
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
NC score	0.314872 (rank : 286)	θ value	2.36792 (rank : 393)
Query Neighborhood Hits	493	Target Neighborhood Hits	317	Shared Neighborhood Hits	263
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PO4F1_HUMAN
NC score	0.311758 (rank : 287)	θ value	3.0926 (rank : 416)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	293
SwissProt Accessions	Q01851, Q14986, Q15318	Gene names	POU4F1, BRN3A, RDC1
Domain Architecture
Description	POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1).

PO4F3_MOUSE
NC score	0.310520 (rank : 288)	θ value	2.36792 (rank : 395)
Query Neighborhood Hits	493	Target Neighborhood Hits	311	Shared Neighborhood Hits	278
SwissProt Accessions	Q63955	Gene names	Pou4f3, Brn-3c, Brn3c
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

PO4F3_HUMAN
NC score	0.309978 (rank : 289)	θ value	2.36792 (rank : 394)
Query Neighborhood Hits	493	Target Neighborhood Hits	307	Shared Neighborhood Hits	277
SwissProt Accessions	Q15319, O60557	Gene names	POU4F3, BRN3C
Domain Architecture
Description	POU domain, class 4, transcription factor 3 (Brain-specific homeobox/POU domain protein 3C) (Brn-3C).

SIX2_MOUSE
NC score	0.302364 (rank : 290)	θ value	θ > 10 (rank : 541)
Query Neighborhood Hits	493	Target Neighborhood Hits	376	Shared Neighborhood Hits	296
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

IRX6_MOUSE
NC score	0.301202 (rank : 291)	θ value	0.279714 (rank : 309)
Query Neighborhood Hits	493	Target Neighborhood Hits	256	Shared Neighborhood Hits	215
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

SIX4_MOUSE
NC score	0.297993 (rank : 292)	θ value	0.0563607 (rank : 277)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	261
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

IRX6_HUMAN
NC score	0.291969 (rank : 293)	θ value	1.38821 (rank : 367)
Query Neighborhood Hits	493	Target Neighborhood Hits	262	Shared Neighborhood Hits	217
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX4_MOUSE
NC score	0.286935 (rank : 294)	θ value	1.06291 (rank : 354)
Query Neighborhood Hits	493	Target Neighborhood Hits	286	Shared Neighborhood Hits	232
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX4_HUMAN
NC score	0.283815 (rank : 295)	θ value	1.06291 (rank : 353)
Query Neighborhood Hits	493	Target Neighborhood Hits	276	Shared Neighborhood Hits	233
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

SIX4_HUMAN
NC score	0.281762 (rank : 296)	θ value	0.0563607 (rank : 276)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	260
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX2_HUMAN
NC score	0.281693 (rank : 297)	θ value	θ > 10 (rank : 540)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	274
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

PO3F3_MOUSE
NC score	0.275025 (rank : 298)	θ value	0.125558 (rank : 290)
Query Neighborhood Hits	493	Target Neighborhood Hits	308	Shared Neighborhood Hits	260
SwissProt Accessions	P31361	Gene names	Pou3f3, Brn-1, Brn1, Otf8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

PO3F3_HUMAN
NC score	0.274573 (rank : 299)	θ value	0.125558 (rank : 289)
Query Neighborhood Hits	493	Target Neighborhood Hits	311	Shared Neighborhood Hits	260
SwissProt Accessions	P20264, P78379	Gene names	POU3F3, BRN1, OTF8
Domain Architecture
Description	POU domain, class 3, transcription factor 3 (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein).

SIX1_MOUSE
NC score	0.273048 (rank : 300)	θ value	θ > 10 (rank : 539)
Query Neighborhood Hits	493	Target Neighborhood Hits	341	Shared Neighborhood Hits	286
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_HUMAN
NC score	0.272818 (rank : 301)	θ value	θ > 10 (rank : 538)
Query Neighborhood Hits	493	Target Neighborhood Hits	343	Shared Neighborhood Hits	286
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

IRX3_MOUSE
NC score	0.263795 (rank : 302)	θ value	0.813845 (rank : 340)
Query Neighborhood Hits	493	Target Neighborhood Hits	303	Shared Neighborhood Hits	196
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

PO3F2_MOUSE
NC score	0.262826 (rank : 303)	θ value	8.99809 (rank : 484)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	268
SwissProt Accessions	P31360	Gene names	Pou3f2, Brn-2, Brn2, Otf7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

PO3F2_HUMAN
NC score	0.262748 (rank : 304)	θ value	8.99809 (rank : 483)
Query Neighborhood Hits	493	Target Neighborhood Hits	308	Shared Neighborhood Hits	267
SwissProt Accessions	P20265, Q14960, Q86V54, Q9UJL0	Gene names	POU3F2, BRN2, OCT7, OTF7
Domain Architecture
Description	POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).

IRX3_HUMAN
NC score	0.261631 (rank : 305)	θ value	0.813845 (rank : 339)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	197
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX2_HUMAN
NC score	0.257846 (rank : 306)	θ value	4.03905 (rank : 428)
Query Neighborhood Hits	493	Target Neighborhood Hits	358	Shared Neighborhood Hits	210
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

PO5F1_MOUSE
NC score	0.256195 (rank : 307)	θ value	0.0431538 (rank : 270)
Query Neighborhood Hits	493	Target Neighborhood Hits	305	Shared Neighborhood Hits	261
SwissProt Accessions	P20263, Q63843	Gene names	Pou5f1, Oct-3, Oct-4, Otf-3, Otf3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (NF-A3).

HOP_HUMAN
NC score	0.255712 (rank : 308)	θ value	θ > 10 (rank : 504)
Query Neighborhood Hits	493	Target Neighborhood Hits	107	Shared Neighborhood Hits	98
SwissProt Accessions	Q9BPY8, Q8N0V6, Q96CI1	Gene names	HOP, HOD, LAGY, NECC1, OB1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Lung cancer-associated Y protein) (Odd homeobox protein 1) (Not expressed in choriocarcinoma protein 1).

IRX5_HUMAN
NC score	0.249550 (rank : 309)	θ value	0.0736092 (rank : 278)
Query Neighborhood Hits	493	Target Neighborhood Hits	362	Shared Neighborhood Hits	212
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

HOP_MOUSE
NC score	0.247793 (rank : 310)	θ value	θ > 10 (rank : 505)
Query Neighborhood Hits	493	Target Neighborhood Hits	102	Shared Neighborhood Hits	91
SwissProt Accessions	Q8R1H0, Q8C1N5, Q8CJ22	Gene names	Hop, Hod, Ob1
Domain Architecture	No domain graphic available
Description	Homeodomain-only protein (Homeobox-only protein) (Odd homeobox protein 1) (mOB1).

PO3F1_MOUSE
NC score	0.244298 (rank : 311)	θ value	1.38821 (rank : 370)
Query Neighborhood Hits	493	Target Neighborhood Hits	261	Shared Neighborhood Hits	234
SwissProt Accessions	P21952	Gene names	Pou3f1, Oct6, Otf-6, Otf6, Scip
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

IRX1_HUMAN
NC score	0.243366 (rank : 312)	θ value	2.36792 (rank : 389)
Query Neighborhood Hits	493	Target Neighborhood Hits	285	Shared Neighborhood Hits	208
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

PO5F1_HUMAN
NC score	0.240308 (rank : 313)	θ value	0.62314 (rank : 332)
Query Neighborhood Hits	493	Target Neighborhood Hits	321	Shared Neighborhood Hits	260
SwissProt Accessions	Q01860, P31359, Q15167, Q15168, Q16422	Gene names	POU5F1, OCT3, OCT4, OTF3
Domain Architecture
Description	POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4).

PO3F1_HUMAN
NC score	0.239927 (rank : 314)	θ value	3.0926 (rank : 415)
Query Neighborhood Hits	493	Target Neighborhood Hits	256	Shared Neighborhood Hits	234
SwissProt Accessions	Q03052	Gene names	POU3F1, OCT6, OTF6
Domain Architecture
Description	POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP).

IRX1_MOUSE
NC score	0.239739 (rank : 315)	θ value	2.36792 (rank : 390)
Query Neighborhood Hits	493	Target Neighborhood Hits	269	Shared Neighborhood Hits	199
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX5_MOUSE
NC score	0.237837 (rank : 316)	θ value	0.365318 (rank : 318)
Query Neighborhood Hits	493	Target Neighborhood Hits	324	Shared Neighborhood Hits	205
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

IRX2_MOUSE
NC score	0.233480 (rank : 317)	θ value	4.03905 (rank : 429)
Query Neighborhood Hits	493	Target Neighborhood Hits	264	Shared Neighborhood Hits	199
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

SIX5_HUMAN
NC score	0.230774 (rank : 318)	θ value	2.36792 (rank : 397)
Query Neighborhood Hits	493	Target Neighborhood Hits	386	Shared Neighborhood Hits	224
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX3_HUMAN
NC score	0.227305 (rank : 319)	θ value	8.99809 (rank : 492)
Query Neighborhood Hits	493	Target Neighborhood Hits	285	Shared Neighborhood Hits	236
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
NC score	0.227291 (rank : 320)	θ value	8.99809 (rank : 493)
Query Neighborhood Hits	493	Target Neighborhood Hits	289	Shared Neighborhood Hits	237
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX6_HUMAN
NC score	0.224895 (rank : 321)	θ value	θ > 10 (rank : 543)
Query Neighborhood Hits	493	Target Neighborhood Hits	269	Shared Neighborhood Hits	225
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

PO3F4_MOUSE
NC score	0.222148 (rank : 322)	θ value	8.99809 (rank : 486)
Query Neighborhood Hits	493	Target Neighborhood Hits	281	Shared Neighborhood Hits	240
SwissProt Accessions	P62515, P25216	Gene names	Pou3f4, Brn-4, Brn4, Otf9
Domain Architecture	No domain graphic available
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

PO3F4_HUMAN
NC score	0.221393 (rank : 323)	θ value	8.99809 (rank : 485)
Query Neighborhood Hits	493	Target Neighborhood Hits	297	Shared Neighborhood Hits	242
SwissProt Accessions	P49335, Q5H9G9, Q99410	Gene names	POU3F4, BRN4, OTF9
Domain Architecture
Description	POU domain, class 3, transcription factor 4 (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4).

SIX6_MOUSE
NC score	0.219949 (rank : 324)	θ value	θ > 10 (rank : 544)
Query Neighborhood Hits	493	Target Neighborhood Hits	267	Shared Neighborhood Hits	226
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

RHOX5_MOUSE
NC score	0.179091 (rank : 325)	θ value	θ > 10 (rank : 536)
Query Neighborhood Hits	493	Target Neighborhood Hits	69	Shared Neighborhood Hits	57
SwissProt Accessions	P52651	Gene names	Rhox5, Pem
Domain Architecture	No domain graphic available
Description	Homeobox protein Rhox5 (Reproductive homeobox on chromosome X 5) (Homeobox protein Pem) (Placenta and embryonic expression protein).

SIX5_MOUSE
NC score	0.169611 (rank : 326)	θ value	θ > 10 (rank : 542)
Query Neighborhood Hits	493	Target Neighborhood Hits	354	Shared Neighborhood Hits	200
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

ZHX3_HUMAN
NC score	0.167596 (rank : 327)	θ value	θ > 10 (rank : 552)
Query Neighborhood Hits	493	Target Neighborhood Hits	331	Shared Neighborhood Hits	207
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX1_MOUSE
NC score	0.163031 (rank : 328)	θ value	θ > 10 (rank : 550)
Query Neighborhood Hits	493	Target Neighborhood Hits	334	Shared Neighborhood Hits	202
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX3_MOUSE
NC score	0.159188 (rank : 329)	θ value	θ > 10 (rank : 553)
Query Neighborhood Hits	493	Target Neighborhood Hits	321	Shared Neighborhood Hits	202
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX1_HUMAN
NC score	0.155291 (rank : 330)	θ value	θ > 10 (rank : 549)
Query Neighborhood Hits	493	Target Neighborhood Hits	307	Shared Neighborhood Hits	196
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

HMBX1_MOUSE
NC score	0.151053 (rank : 331)	θ value	θ > 10 (rank : 501)
Query Neighborhood Hits	493	Target Neighborhood Hits	117	Shared Neighborhood Hits	94
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

HMBX1_HUMAN
NC score	0.145384 (rank : 332)	θ value	θ > 10 (rank : 500)
Query Neighborhood Hits	493	Target Neighborhood Hits	118	Shared Neighborhood Hits	94
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

ZHX2_HUMAN
NC score	0.141584 (rank : 333)	θ value	3.0926 (rank : 421)
Query Neighborhood Hits	493	Target Neighborhood Hits	347	Shared Neighborhood Hits	171
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

PO5FM_HUMAN
NC score	0.140139 (rank : 334)	θ value	θ > 10 (rank : 529)
Query Neighborhood Hits	493	Target Neighborhood Hits	212	Shared Neighborhood Hits	184
SwissProt Accessions	Q9BZV7	Gene names	POU5F1P1, POU5FLC20
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 2.

PO5FL_HUMAN
NC score	0.139104 (rank : 335)	θ value	θ > 10 (rank : 528)
Query Neighborhood Hits	493	Target Neighborhood Hits	214	Shared Neighborhood Hits	181
SwissProt Accessions	Q06416, Q9BZV9	Gene names	POU5F1P1, OTF3C, POU5FLC8
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 1 (Octamer- binding protein 3-like).

ZHX2_MOUSE
NC score	0.135196 (rank : 336)	θ value	θ > 10 (rank : 551)
Query Neighborhood Hits	493	Target Neighborhood Hits	435	Shared Neighborhood Hits	173
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

CUTL1_MOUSE
NC score	0.112495 (rank : 337)	θ value	θ > 10 (rank : 496)
Query Neighborhood Hits	493	Target Neighborhood Hits	1620	Shared Neighborhood Hits	223
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

PAX2_MOUSE
NC score	0.109386 (rank : 338)	θ value	θ > 10 (rank : 523)
Query Neighborhood Hits	493	Target Neighborhood Hits	86	Shared Neighborhood Hits	58
SwissProt Accessions	P32114	Gene names	Pax2, Pax-2
Domain Architecture
Description	Paired box protein Pax-2.

PAX2_HUMAN
NC score	0.108963 (rank : 339)	θ value	θ > 10 (rank : 522)
Query Neighborhood Hits	493	Target Neighborhood Hits	84	Shared Neighborhood Hits	58
SwissProt Accessions	Q02962, Q15105, Q15110, Q15837	Gene names	PAX2
Domain Architecture
Description	Paired box protein Pax-2.

PAX5_HUMAN
NC score	0.106602 (rank : 340)	θ value	6.88961 (rank : 458)
Query Neighborhood Hits	493	Target Neighborhood Hits	106	Shared Neighborhood Hits	59
SwissProt Accessions	Q02548, O75933	Gene names	PAX5
Domain Architecture
Description	Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP).

PAX5_MOUSE
NC score	0.106437 (rank : 341)	θ value	5.27518 (rank : 451)
Query Neighborhood Hits	493	Target Neighborhood Hits	106	Shared Neighborhood Hits	60
SwissProt Accessions	Q02650	Gene names	Pax5, Pax-5
Domain Architecture
Description	Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP).

CUTL2_HUMAN
NC score	0.105855 (rank : 342)	θ value	θ > 10 (rank : 497)
Query Neighborhood Hits	493	Target Neighborhood Hits	906	Shared Neighborhood Hits	199
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_MOUSE
NC score	0.103959 (rank : 343)	θ value	θ > 10 (rank : 498)
Query Neighborhood Hits	493	Target Neighborhood Hits	771	Shared Neighborhood Hits	171
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL1_HUMAN
NC score	0.099277 (rank : 344)	θ value	θ > 10 (rank : 495)
Query Neighborhood Hits	493	Target Neighborhood Hits	1574	Shared Neighborhood Hits	210
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

PAX8_MOUSE
NC score	0.092055 (rank : 345)	θ value	θ > 10 (rank : 525)
Query Neighborhood Hits	493	Target Neighborhood Hits	62	Shared Neighborhood Hits	31
SwissProt Accessions	Q00288, P97342	Gene names	Pax8, Pax-8
Domain Architecture
Description	Paired box protein Pax-8.

PO5FN_HUMAN
NC score	0.084439 (rank : 346)	θ value	θ > 10 (rank : 530)
Query Neighborhood Hits	493	Target Neighborhood Hits	134	Shared Neighborhood Hits	112
SwissProt Accessions	Q9BZW0	Gene names	POU5FLC1
Domain Architecture
Description	POU domain, class 5, transcription factor 1-like protein 3.

PAX8_HUMAN
NC score	0.084034 (rank : 347)	θ value	θ > 10 (rank : 524)
Query Neighborhood Hits	493	Target Neighborhood Hits	56	Shared Neighborhood Hits	25
SwissProt Accessions	Q06710, Q09155, Q16337, Q16338, Q16339, Q96J49	Gene names	PAX8
Domain Architecture
Description	Paired box protein Pax-8.

LMO4_HUMAN
NC score	0.079578 (rank : 348)	θ value	θ > 10 (rank : 508)
Query Neighborhood Hits	493	Target Neighborhood Hits	111	Shared Neighborhood Hits	25
SwissProt Accessions	P61968, O00158, O88894	Gene names	LMO4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

LMO4_MOUSE
NC score	0.079578 (rank : 349)	θ value	θ > 10 (rank : 509)
Query Neighborhood Hits	493	Target Neighborhood Hits	111	Shared Neighborhood Hits	25
SwissProt Accessions	P61969, O00158, O88894	Gene names	Lmo4
Domain Architecture
Description	LIM domain transcription factor LMO4 (LIM domain only protein 4) (LMO- 4) (Breast tumor autoantigen).

PAX9_MOUSE
NC score	0.079277 (rank : 350)	θ value	θ > 10 (rank : 527)
Query Neighborhood Hits	493	Target Neighborhood Hits	67	Shared Neighborhood Hits	17
SwissProt Accessions	P47242	Gene names	Pax9, Pax-9
Domain Architecture
Description	Paired box protein Pax-9.

PAX9_HUMAN
NC score	0.078605 (rank : 351)	θ value	θ > 10 (rank : 526)
Query Neighborhood Hits	493	Target Neighborhood Hits	92	Shared Neighborhood Hits	22
SwissProt Accessions	P55771, Q99582, Q9UQR4	Gene names	PAX9
Domain Architecture
Description	Paired box protein Pax-9.

PAX1_HUMAN
NC score	0.078017 (rank : 352)	θ value	θ > 10 (rank : 520)
Query Neighborhood Hits	493	Target Neighborhood Hits	72	Shared Neighborhood Hits	30
SwissProt Accessions	P15863, Q642X9, Q6NTC0, Q9Y558	Gene names	PAX1, HUP48
Domain Architecture
Description	Paired box protein Pax-1 (HUP48).

LMO3_HUMAN
NC score	0.077907 (rank : 353)	θ value	θ > 10 (rank : 506)
Query Neighborhood Hits	493	Target Neighborhood Hits	111	Shared Neighborhood Hits	25
SwissProt Accessions	Q8TAP4, Q8N974, Q9UDD5	Gene names	LMO3, RBTN3, RHOM3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1) (Rhombotin-3).

LMO3_MOUSE
NC score	0.077907 (rank : 354)	θ value	θ > 10 (rank : 507)
Query Neighborhood Hits	493	Target Neighborhood Hits	111	Shared Neighborhood Hits	25
SwissProt Accessions	Q8BZL8	Gene names	Lmo3
Domain Architecture
Description	LIM-only protein 3 (Neuronal-specific transcription factor DAT1).

RBTN1_MOUSE
NC score	0.077825 (rank : 355)	θ value	θ > 10 (rank : 533)
Query Neighborhood Hits	493	Target Neighborhood Hits	109	Shared Neighborhood Hits	25
SwissProt Accessions	Q924W9	Gene names	Lmo1, Rbtn1, Rhom1, Ttg1
Domain Architecture	No domain graphic available
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (LIM-only protein 1).

RBTN1_HUMAN
NC score	0.077809 (rank : 356)	θ value	θ > 10 (rank : 532)
Query Neighborhood Hits	493	Target Neighborhood Hits	110	Shared Neighborhood Hits	25
SwissProt Accessions	P25800, Q4VBC5	Gene names	LMO1, RBTN1, RHOM1, TTG1
Domain Architecture
Description	Rhombotin-1 (Cysteine-rich protein TTG-1) (T-cell translocation protein 1) (LIM-only protein 1).

OGFR_HUMAN
NC score	0.076989 (rank : 357)	θ value	6.88961 (rank : 457)
Query Neighborhood Hits	493	Target Neighborhood Hits	1582	Shared Neighborhood Hits	208
SwissProt Accessions	Q9NZT2, O96029, Q4VXW5, Q96CM2, Q9BQW1, Q9H4H0, Q9H7J5, Q9NZT3, Q9NZT4	Gene names	OGFR
Domain Architecture
Description	Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor) (7-60 protein).

PAX1_MOUSE
NC score	0.076620 (rank : 358)	θ value	θ > 10 (rank : 521)
Query Neighborhood Hits	493	Target Neighborhood Hits	69	Shared Neighborhood Hits	22
SwissProt Accessions	P09084, Q9R2B1	Gene names	Pax1, Pax-1
Domain Architecture
Description	Paired box protein Pax-1.

RBTN2_MOUSE
NC score	0.074196 (rank : 359)	θ value	θ > 10 (rank : 535)
Query Neighborhood Hits	493	Target Neighborhood Hits	114	Shared Neighborhood Hits	25
SwissProt Accessions	P25801	Gene names	Lmo2, Rbtn-2, Rbtn2, Rhom-2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

RBTN2_HUMAN
NC score	0.074194 (rank : 360)	θ value	θ > 10 (rank : 534)
Query Neighborhood Hits	493	Target Neighborhood Hits	114	Shared Neighborhood Hits	25
SwissProt Accessions	P25791, Q9HD58	Gene names	LMO2, RBTN2, RHOM2, TTG2
Domain Architecture
Description	Rhombotin-2 (Cysteine-rich protein TTG-2) (T-cell translocation protein 2) (LIM-only protein 2).

SSBP4_HUMAN
NC score	0.067902 (rank : 361)	θ value	θ > 10 (rank : 547)
Query Neighborhood Hits	493	Target Neighborhood Hits	753	Shared Neighborhood Hits	166
SwissProt Accessions	Q9BWG4	Gene names	SSBP4
Domain Architecture
Description	Single-stranded DNA-binding protein 4.

HNF6_MOUSE
NC score	0.064547 (rank : 362)	θ value	θ > 10 (rank : 503)
Query Neighborhood Hits	493	Target Neighborhood Hits	124	Shared Neighborhood Hits	76
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

SMR3A_HUMAN
NC score	0.062007 (rank : 363)	θ value	0.125558 (rank : 294)
Query Neighborhood Hits	493	Target Neighborhood Hits	93	Shared Neighborhood Hits	9
SwissProt Accessions	Q99954	Gene names	SMR3A, PBI, PROL5
Domain Architecture	No domain graphic available
Description	Submaxillary gland androgen-regulated protein 3 homolog A precursor (Proline-rich protein 5) (Proline-rich protein PBI).

HNF6_HUMAN
NC score	0.060696 (rank : 364)	θ value	θ > 10 (rank : 502)
Query Neighborhood Hits	493	Target Neighborhood Hits	127	Shared Neighborhood Hits	74
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

LPP_HUMAN
NC score	0.060593 (rank : 365)	θ value	θ > 10 (rank : 510)
Query Neighborhood Hits	493	Target Neighborhood Hits	775	Shared Neighborhood Hits	145
SwissProt Accessions	Q93052, Q8NFX5	Gene names	LPP
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner (LIM domain-containing preferred translocation partner in lipoma).

MEIS2_MOUSE
NC score	0.059165 (rank : 366)	θ value	θ > 10 (rank : 514)
Query Neighborhood Hits	493	Target Neighborhood Hits	208	Shared Neighborhood Hits	103
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

SPRM1_MOUSE
NC score	0.059012 (rank : 367)	θ value	θ > 10 (rank : 546)
Query Neighborhood Hits	493	Target Neighborhood Hits	73	Shared Neighborhood Hits	60
SwissProt Accessions	Q9DAC9	Gene names	Sprm1
Domain Architecture
Description	Sperm 1 POU-domain transcription factor (SPRM-1).

SPRM1_HUMAN
NC score	0.058644 (rank : 368)	θ value	θ > 10 (rank : 545)
Query Neighborhood Hits	493	Target Neighborhood Hits	72	Shared Neighborhood Hits	60
SwissProt Accessions	Q8N7G0, Q8N748	Gene names	SPRM1
Domain Architecture
Description	Sperm 1 POU-domain transcription factor (SPRM-1).

MEIS2_HUMAN
NC score	0.058543 (rank : 369)	θ value	θ > 10 (rank : 513)
Query Neighborhood Hits	493	Target Neighborhood Hits	182	Shared Neighborhood Hits	96
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

PRRT3_HUMAN
NC score	0.054979 (rank : 370)	θ value	θ > 10 (rank : 531)
Query Neighborhood Hits	493	Target Neighborhood Hits	998	Shared Neighborhood Hits	139
SwissProt Accessions	Q5FWE3, Q49AD0, Q6UXY6, Q8NBC9	Gene names	PRRT3, UNQ5823/PRO19642
Domain Architecture	No domain graphic available
Description	Proline-rich transmembrane protein 3.

ONEC2_HUMAN
NC score	0.054618 (rank : 371)	θ value	θ > 10 (rank : 518)
Query Neighborhood Hits	493	Target Neighborhood Hits	115	Shared Neighborhood Hits	67
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

ONEC2_MOUSE
NC score	0.052706 (rank : 372)	θ value	θ > 10 (rank : 519)
Query Neighborhood Hits	493	Target Neighborhood Hits	123	Shared Neighborhood Hits	69
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

TGIF2_MOUSE
NC score	0.052164 (rank : 373)	θ value	θ > 10 (rank : 548)
Query Neighborhood Hits	493	Target Neighborhood Hits	127	Shared Neighborhood Hits	63
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

BCL9_HUMAN
NC score	0.052053 (rank : 374)	θ value	θ > 10 (rank : 494)
Query Neighborhood Hits	493	Target Neighborhood Hits	1008	Shared Neighborhood Hits	156
SwissProt Accessions	O00512	Gene names	BCL9
Domain Architecture	No domain graphic available
Description	B-cell lymphoma 9 protein (Bcl-9) (Legless homolog).

PRP5_HUMAN
NC score	0.051932 (rank : 375)	θ value	1.81305 (rank : 377)
Query Neighborhood Hits	493	Target Neighborhood Hits	108	Shared Neighborhood Hits	24
SwissProt Accessions	P04281	Gene names
Domain Architecture	No domain graphic available
Description	Basic proline-rich peptide IB-1.

MEIS3_HUMAN
NC score	0.051905 (rank : 376)	θ value	θ > 10 (rank : 515)
Query Neighborhood Hits	493	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MUC1_HUMAN
NC score	0.051883 (rank : 377)	θ value	θ > 10 (rank : 517)
Query Neighborhood Hits	493	Target Neighborhood Hits	975	Shared Neighborhood Hits	151
SwissProt Accessions	P15941, P13931, P15942, P17626, Q14128, Q14876, Q16437, Q16442, Q16615, Q9BXA4, Q9UE75, Q9UE76, Q9UQL1, Q9Y4J2	Gene names	MUC1
Domain Architecture
Description	Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut- reactive urinary mucin) (PUM) (Breast carcinoma-associated antigen DF3) (CD227 antigen).

MEIS3_MOUSE
NC score	0.050609 (rank : 378)	θ value	θ > 10 (rank : 516)
Query Neighborhood Hits	493	Target Neighborhood Hits	118	Shared Neighborhood Hits	81
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

SC24C_HUMAN
NC score	0.050452 (rank : 379)	θ value	θ > 10 (rank : 537)
Query Neighborhood Hits	493	Target Neighborhood Hits	662	Shared Neighborhood Hits	139
SwissProt Accessions	P53992, Q8WV25	Gene names	SEC24C, KIAA0079
Domain Architecture
Description	Protein transport protein Sec24C (SEC24-related protein C).

MEIS1_HUMAN
NC score	0.050156 (rank : 380)	θ value	θ > 10 (rank : 511)
Query Neighborhood Hits	493	Target Neighborhood Hits	115	Shared Neighborhood Hits	82
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS1_MOUSE
NC score	0.050154 (rank : 381)	θ value	θ > 10 (rank : 512)
Query Neighborhood Hits	493	Target Neighborhood Hits	115	Shared Neighborhood Hits	82
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

WBP2_MOUSE
NC score	0.049684 (rank : 382)	θ value	0.365318 (rank : 322)
Query Neighborhood Hits	493	Target Neighborhood Hits	51	Shared Neighborhood Hits	11
SwissProt Accessions	P97765	Gene names	Wbp2
Domain Architecture
Description	WW domain-binding protein 2 (WBP-2).

WBP2_HUMAN
NC score	0.048369 (rank : 383)	θ value	0.47712 (rank : 328)
Query Neighborhood Hits	493	Target Neighborhood Hits	55	Shared Neighborhood Hits	10
SwissProt Accessions	Q969T9, O95638	Gene names	WBP2
Domain Architecture
Description	WW domain-binding protein 2 (WBP-2).

ZN385_HUMAN
NC score	0.047041 (rank : 384)	θ value	6.88961 (rank : 467)
Query Neighborhood Hits	493	Target Neighborhood Hits	614	Shared Neighborhood Hits	111
SwissProt Accessions	Q96PM9, Q5VH53, Q9H7R6, Q9UFU3	Gene names	ZNF385, HZF, RZF
Domain Architecture
Description	Zinc finger protein 385 (Hematopoietic zinc finger protein) (Retinal zinc finger protein).

CO5A2_HUMAN
NC score	0.042947 (rank : 385)	θ value	5.27518 (rank : 444)
Query Neighborhood Hits	493	Target Neighborhood Hits	760	Shared Neighborhood Hits	115
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

WASF2_MOUSE
NC score	0.041494 (rank : 386)	θ value	0.0431538 (rank : 272)
Query Neighborhood Hits	493	Target Neighborhood Hits	315	Shared Neighborhood Hits	35
SwissProt Accessions	Q8BH43	Gene names	Wasf2, Wave2
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 2 (WASP-family protein member 2) (Protein WAVE-2).

WASF2_HUMAN
NC score	0.041448 (rank : 387)	θ value	0.0330416 (rank : 269)
Query Neighborhood Hits	493	Target Neighborhood Hits	280	Shared Neighborhood Hits	31
SwissProt Accessions	Q9Y6W5, O60794, Q9UDY7	Gene names	WASF2, WAVE2
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 2 (WASP-family protein member 2) (Protein WAVE-2) (Verprolin homology domain-containing protein 2).

PEF1_HUMAN
NC score	0.041293 (rank : 388)	θ value	0.00035302 (rank : 244)
Query Neighborhood Hits	493	Target Neighborhood Hits	135	Shared Neighborhood Hits	29
SwissProt Accessions	Q9UBV8	Gene names	PEF1, ABP32
Domain Architecture	No domain graphic available
Description	Peflin (PEF protein with a long N-terminal hydrophobic domain) (Penta- EF hand domain-containing protein 1).

LPP_MOUSE
NC score	0.040979 (rank : 389)	θ value	2.36792 (rank : 391)
Query Neighborhood Hits	493	Target Neighborhood Hits	247	Shared Neighborhood Hits	45
SwissProt Accessions	Q8BFW7, Q5U407, Q8BHI1, Q8BKI0, Q8BKN2, Q8BLF4, Q8BLG3, Q8C101	Gene names	Lpp
Domain Architecture	No domain graphic available
Description	Lipoma-preferred partner homolog.

SPT5H_MOUSE
NC score	0.040478 (rank : 390)	θ value	1.06291 (rank : 357)
Query Neighborhood Hits	493	Target Neighborhood Hits	437	Shared Neighborhood Hits	69
SwissProt Accessions	O55201, Q3UJ77, Q3UJH1, Q3UKD7, Q3UM54, Q6PB73, Q6PDP0, Q6PFR4	Gene names	Supt5h
Domain Architecture	No domain graphic available
Description	Transcription elongation factor SPT5 (DRB sensitivity-inducing factor large subunit) (DSIF large subunit).

CO5A1_HUMAN
NC score	0.039924 (rank : 391)	θ value	0.21417 (rank : 300)
Query Neighborhood Hits	493	Target Neighborhood Hits	434	Shared Neighborhood Hits	65
SwissProt Accessions	P20908, Q15094, Q5SUX4	Gene names	COL5A1
Domain Architecture
Description	Collagen alpha-1(V) chain precursor.

SPT5H_HUMAN
NC score	0.039874 (rank : 392)	θ value	1.81305 (rank : 380)
Query Neighborhood Hits	493	Target Neighborhood Hits	436	Shared Neighborhood Hits	70
SwissProt Accessions	O00267, O43279, Q59G52, Q99639	Gene names	SUPT5H, SPT5, SPT5H
Domain Architecture	No domain graphic available
Description	Transcription elongation factor SPT5 (hSPT5) (DRB sensitivity-inducing factor large subunit) (DSIF large subunit) (DSIF p160) (Tat- cotransactivator 1 protein) (Tat-CT1 protein).

CO5A1_MOUSE
NC score	0.039395 (rank : 393)	θ value	0.21417 (rank : 301)
Query Neighborhood Hits	493	Target Neighborhood Hits	419	Shared Neighborhood Hits	61
SwissProt Accessions	O88207	Gene names	Col5a1
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(V) chain precursor.

HRG_HUMAN
NC score	0.039198 (rank : 394)	θ value	0.163984 (rank : 296)
Query Neighborhood Hits	493	Target Neighborhood Hits	43	Shared Neighborhood Hits	4
SwissProt Accessions	P04196	Gene names	HRG
Domain Architecture
Description	Histidine-rich glycoprotein precursor (Histidine-proline-rich glycoprotein) (HPRG).

WASF4_HUMAN
NC score	0.039110 (rank : 395)	θ value	0.21417 (rank : 305)
Query Neighborhood Hits	493	Target Neighborhood Hits	282	Shared Neighborhood Hits	32
SwissProt Accessions	Q8IV90	Gene names	WASF4, SCAR2
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 4 (WASP-family protein member 4).

COBA2_MOUSE
NC score	0.038813 (rank : 396)	θ value	3.0926 (rank : 404)
Query Neighborhood Hits	493	Target Neighborhood Hits	501	Shared Neighborhood Hits	94
SwissProt Accessions	Q64739, Q61432, Q9Z1W0	Gene names	Col11a2
Domain Architecture
Description	Collagen alpha-2(XI) chain precursor.

COBA1_HUMAN
NC score	0.038393 (rank : 397)	θ value	0.365318 (rank : 316)
Query Neighborhood Hits	493	Target Neighborhood Hits	491	Shared Neighborhood Hits	81
SwissProt Accessions	P12107, Q14034, Q9UIT4, Q9UIT5, Q9UIT6	Gene names	COL11A1
Domain Architecture
Description	Collagen alpha-1(XI) chain precursor.

SF01_HUMAN
NC score	0.038175 (rank : 398)	θ value	0.0736092 (rank : 281)
Query Neighborhood Hits	493	Target Neighborhood Hits	287	Shared Neighborhood Hits	28
SwissProt Accessions	Q15637, Q14818, Q14819, Q15913, Q8IY00, Q92744, Q92745, Q969H7, Q9BW01, Q9UEI0	Gene names	SF1, ZFM1, ZNF162
Domain Architecture
Description	Splicing factor 1 (Zinc finger protein 162) (Transcription factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP).

COBA1_MOUSE
NC score	0.037887 (rank : 399)	θ value	0.813845 (rank : 338)
Query Neighborhood Hits	493	Target Neighborhood Hits	487	Shared Neighborhood Hits	80
SwissProt Accessions	Q61245, Q64047	Gene names	Col11a1
Domain Architecture
Description	Collagen alpha-1(XI) chain precursor.

YLPM1_HUMAN
NC score	0.036595 (rank : 400)	θ value	2.36792 (rank : 400)
Query Neighborhood Hits	493	Target Neighborhood Hits	670	Shared Neighborhood Hits	69
SwissProt Accessions	P49750, P49752, Q96I64, Q9P1V7	Gene names	YLPM1, C14orf170, ZAP3
Domain Architecture
Description	YLP motif-containing protein 1 (Nuclear protein ZAP3) (ZAP113).

ARI1A_HUMAN
NC score	0.036528 (rank : 401)	θ value	0.365318 (rank : 315)
Query Neighborhood Hits	493	Target Neighborhood Hits	787	Shared Neighborhood Hits	110
SwissProt Accessions	O14497, Q53FK9, Q5T0W1, Q5T0W2, Q5T0W3, Q8NFD6, Q96T89, Q9BY33, Q9HBJ5, Q9UPZ1	Gene names	ARID1A, C1orf4, OSA1, SMARCF1
Domain Architecture
Description	AT-rich interactive domain-containing protein 1A (ARID domain- containing protein 1A) (SWI/SNF-related, matrix-associated, actin- dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like protein) (Osa homolog 1) (hOSA1) (hELD) (BRG1-associated factor 250) (BAF250) (BRG1-associated factor 250a) (BAF250A).

EWS_MOUSE
NC score	0.035622 (rank : 402)	θ value	0.279714 (rank : 307)
Query Neighborhood Hits	493	Target Neighborhood Hits	271	Shared Neighborhood Hits	46
SwissProt Accessions	Q61545	Gene names	Ewsr1, Ews, Ewsh
Domain Architecture
Description	RNA-binding protein EWS.

IQEC2_HUMAN
NC score	0.035558 (rank : 403)	θ value	0.0148317 (rank : 259)
Query Neighborhood Hits	493	Target Neighborhood Hits	403	Shared Neighborhood Hits	29
SwissProt Accessions	Q5JU85, O60275	Gene names	IQSEC2, KIAA0522
Domain Architecture	No domain graphic available
Description	IQ motif and Sec7 domain-containing protein 2.

SF01_MOUSE
NC score	0.035489 (rank : 404)	θ value	0.279714 (rank : 314)
Query Neighborhood Hits	493	Target Neighborhood Hits	240	Shared Neighborhood Hits	21
SwissProt Accessions	Q64213, O08817, P70167, Q61454, Q921Z4	Gene names	Sf1, Zfm1, Zfp162
Domain Architecture
Description	Splicing factor 1 (Zinc finger protein 162) (Transcription factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point- binding protein mBBP) (BBP) (CW17).

HNRL1_MOUSE
NC score	0.035386 (rank : 405)	θ value	0.0252991 (rank : 263)
Query Neighborhood Hits	493	Target Neighborhood Hits	200	Shared Neighborhood Hits	30
SwissProt Accessions	Q8VDM6, Q3U201, Q3UPB0, Q6AZA7, Q8BY45, Q8K365	Gene names	Hnrpul1
Domain Architecture	No domain graphic available
Description	Heterogeneous nuclear ribonucleoprotein U-like protein 1.

PRB3_HUMAN
NC score	0.035004 (rank : 406)	θ value	0.0252991 (rank : 266)
Query Neighborhood Hits	493	Target Neighborhood Hits	318	Shared Neighborhood Hits	40
SwissProt Accessions	Q04118, Q15188, Q7M4M9	Gene names	PRB3
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 3 precursor (Parotid salivary glycoprotein G1) (Proline-rich protein G1).

IQEC2_MOUSE
NC score	0.034787 (rank : 407)	θ value	0.0148317 (rank : 260)
Query Neighborhood Hits	493	Target Neighborhood Hits	417	Shared Neighborhood Hits	28
SwissProt Accessions	Q5DU25	Gene names	Iqsec2, Kiaa0522
Domain Architecture	No domain graphic available
Description	IQ motif and Sec7 domain-containing protein 2.

CO1A1_HUMAN
NC score	0.034046 (rank : 408)	θ value	0.125558 (rank : 285)
Query Neighborhood Hits	493	Target Neighborhood Hits	475	Shared Neighborhood Hits	69
SwissProt Accessions	P02452, P78441, Q13896, Q13902, Q13903, Q14037, Q14992, Q15176, Q15201, Q16050, Q7KZ30, Q7KZ34, Q8IVI5, Q9UML6, Q9UMM7	Gene names	COL1A1
Domain Architecture
Description	Collagen alpha-1(I) chain precursor.

BSN_MOUSE
NC score	0.034023 (rank : 409)	θ value	1.06291 (rank : 348)
Query Neighborhood Hits	493	Target Neighborhood Hits	2057	Shared Neighborhood Hits	169
SwissProt Accessions	O88737, Q6ZQB5	Gene names	Bsn, Kiaa0434
Domain Architecture	No domain graphic available
Description	Protein bassoon.

CO2A1_MOUSE
NC score	0.033965 (rank : 410)	θ value	3.0926 (rank : 402)
Query Neighborhood Hits	493	Target Neighborhood Hits	483	Shared Neighborhood Hits	85
SwissProt Accessions	P28481	Gene names	Col2a1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO4A1_HUMAN
NC score	0.033897 (rank : 411)	θ value	0.813845 (rank : 337)
Query Neighborhood Hits	493	Target Neighborhood Hits	425	Shared Neighborhood Hits	82
SwissProt Accessions	P02462	Gene names	COL4A1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

CO2A1_HUMAN
NC score	0.033670 (rank : 412)	θ value	1.38821 (rank : 359)
Query Neighborhood Hits	493	Target Neighborhood Hits	486	Shared Neighborhood Hits	86
SwissProt Accessions	P02458, Q12985, Q14009, Q14044, Q14046, Q14056, Q14058, Q16672, Q6LBY1, Q6LBY2, Q6LBY3, Q99227, Q9UE38, Q9UE39, Q9UE40, Q9UE41, Q9UE42, Q9UE43	Gene names	COL2A1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

JUNB_HUMAN
NC score	0.033017 (rank : 413)	θ value	0.0252991 (rank : 264)
Query Neighborhood Hits	493	Target Neighborhood Hits	97	Shared Neighborhood Hits	4
SwissProt Accessions	P17275, Q96GH3	Gene names	JUNB
Domain Architecture
Description	Transcription factor jun-B.

CO1A1_MOUSE
NC score	0.032831 (rank : 414)	θ value	0.125558 (rank : 286)
Query Neighborhood Hits	493	Target Neighborhood Hits	457	Shared Neighborhood Hits	63
SwissProt Accessions	P11087, Q53WT0, Q60635, Q61367, Q61427, Q63919, Q6PCL3, Q810J9	Gene names	Col1a1, Cola1
Domain Architecture
Description	Collagen alpha-1(I) chain precursor.

CO4A2_HUMAN
NC score	0.032369 (rank : 415)	θ value	8.99809 (rank : 474)
Query Neighborhood Hits	493	Target Neighborhood Hits	454	Shared Neighborhood Hits	84
SwissProt Accessions	P08572	Gene names	COL4A2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

ATN1_HUMAN
NC score	0.032153 (rank : 416)	θ value	0.47712 (rank : 324)
Query Neighborhood Hits	493	Target Neighborhood Hits	676	Shared Neighborhood Hits	62
SwissProt Accessions	P54259, Q99495, Q99621, Q9UEK7	Gene names	ATN1, DRPLA
Domain Architecture
Description	Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein).

CO3A1_HUMAN
NC score	0.032110 (rank : 417)	θ value	0.62314 (rank : 330)
Query Neighborhood Hits	493	Target Neighborhood Hits	452	Shared Neighborhood Hits	60
SwissProt Accessions	P02461, Q15112, Q16403, Q6LDB3, Q6LDJ2, Q6LDJ3, Q7KZ56	Gene names	COL3A1
Domain Architecture
Description	Collagen alpha-1(III) chain precursor.

COBA2_HUMAN
NC score	0.032010 (rank : 418)	θ value	3.0926 (rank : 403)
Query Neighborhood Hits	493	Target Neighborhood Hits	408	Shared Neighborhood Hits	62
SwissProt Accessions	P13942, Q07751, Q13271, Q13272, Q13273, Q99866, Q9UIP9	Gene names	COL11A2
Domain Architecture
Description	Collagen alpha-2(XI) chain precursor.

CO4A3_HUMAN
NC score	0.031722 (rank : 419)	θ value	4.03905 (rank : 424)
Query Neighborhood Hits	493	Target Neighborhood Hits	421	Shared Neighborhood Hits	80
SwissProt Accessions	Q01955, Q9BQT2	Gene names	COL4A3
Domain Architecture
Description	Collagen alpha-3(IV) chain precursor (Goodpasture antigen).

JPH2_HUMAN
NC score	0.031578 (rank : 420)	θ value	5.27518 (rank : 447)
Query Neighborhood Hits	493	Target Neighborhood Hits	639	Shared Neighborhood Hits	115
SwissProt Accessions	Q9BR39, O95913, Q5JY74, Q9UJN4	Gene names	JPH2, JP2
Domain Architecture
Description	Junctophilin-2 (Junctophilin type 2) (JP-2).

JUNB_MOUSE
NC score	0.031030 (rank : 421)	θ value	0.279714 (rank : 310)
Query Neighborhood Hits	493	Target Neighborhood Hits	116	Shared Neighborhood Hits	9
SwissProt Accessions	P09450, Q8C2G9	Gene names	Junb, Jun-b
Domain Architecture
Description	Transcription factor jun-B.

PRB4S_HUMAN
NC score	0.030913 (rank : 422)	θ value	0.0563607 (rank : 274)
Query Neighborhood Hits	493	Target Neighborhood Hits	330	Shared Neighborhood Hits	37
SwissProt Accessions	P10163, P02813	Gene names	PRB4
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 4 allele S precursor (Salivary proline-rich protein Po) (Parotid o protein) [Contains: Protein N1; Glycosylated protein A].

WASF1_MOUSE
NC score	0.030561 (rank : 423)	θ value	3.0926 (rank : 420)
Query Neighborhood Hits	493	Target Neighborhood Hits	261	Shared Neighborhood Hits	21
SwissProt Accessions	Q8R5H6, Q91W51, Q9ERQ9	Gene names	Wasf1, Wave1
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 1 (WASP-family protein member 1) (Protein WAVE-1).

HNRL1_HUMAN
NC score	0.030434 (rank : 424)	θ value	0.365318 (rank : 317)
Query Neighborhood Hits	493	Target Neighborhood Hits	173	Shared Neighborhood Hits	27
SwissProt Accessions	Q9BUJ2, O76022, Q6ZSZ0, Q7L8P4, Q8N6Z4, Q96G37, Q9HAL3, Q9UG75	Gene names	HNRPUL1, E1BAP5
Domain Architecture	No domain graphic available
Description	Heterogeneous nuclear ribonucleoprotein U-like protein 1 (Adenovirus early region 1B-associated protein 5) (E1B-55 kDa-associated protein 5) (E1B-AP5).

CO4A1_MOUSE
NC score	0.030198 (rank : 425)	θ value	8.99809 (rank : 473)
Query Neighborhood Hits	493	Target Neighborhood Hits	450	Shared Neighborhood Hits	78
SwissProt Accessions	P02463	Gene names	Col4a1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

WASF1_HUMAN
NC score	0.030028 (rank : 426)	θ value	4.03905 (rank : 441)
Query Neighborhood Hits	493	Target Neighborhood Hits	260	Shared Neighborhood Hits	25
SwissProt Accessions	Q92558	Gene names	WASF1, KIAA0269, SCAR1, WAVE1
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein family member 1 (WASP-family protein member 1) (Protein WAVE-1) (Verprolin homology domain-containing protein 1).

CO3A1_MOUSE
NC score	0.029818 (rank : 427)	θ value	8.99809 (rank : 472)
Query Neighborhood Hits	493	Target Neighborhood Hits	466	Shared Neighborhood Hits	60
SwissProt Accessions	P08121, Q61429, Q9CRN7	Gene names	Col3a1
Domain Architecture
Description	Collagen alpha-1(III) chain precursor.

EWS_HUMAN
NC score	0.029750 (rank : 428)	θ value	0.279714 (rank : 306)
Query Neighborhood Hits	493	Target Neighborhood Hits	249	Shared Neighborhood Hits	39
SwissProt Accessions	Q01844, Q92635	Gene names	EWSR1, EWS
Domain Architecture
Description	RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma breakpoint region 1 protein).

CIC_HUMAN
NC score	0.029658 (rank : 429)	θ value	2.36792 (rank : 383)
Query Neighborhood Hits	493	Target Neighborhood Hits	992	Shared Neighborhood Hits	113
SwissProt Accessions	Q96RK0, Q7LGI1, Q9UEG5, Q9Y6T1	Gene names	CIC, KIAA0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

YLPM1_MOUSE
NC score	0.029308 (rank : 430)	θ value	2.36792 (rank : 401)
Query Neighborhood Hits	493	Target Neighborhood Hits	505	Shared Neighborhood Hits	37
SwissProt Accessions	Q9R0I7, Q7TMM4	Gene names	Ylpm1, Zap, Zap3
Domain Architecture	No domain graphic available
Description	YLP motif-containing protein 1 (Nuclear protein ZAP3).

RERE_HUMAN
NC score	0.028724 (rank : 431)	θ value	1.81305 (rank : 378)
Query Neighborhood Hits	493	Target Neighborhood Hits	779	Shared Neighborhood Hits	71
SwissProt Accessions	Q9P2R6, O43393, O75046, O75359, Q5VXL9, Q6P6B9, Q9Y2W4	Gene names	RERE, ARG, ARP, ATN1L, KIAA0458
Domain Architecture	No domain graphic available
Description	Arginine-glutamic acid dipeptide repeats protein (Atrophin-1-like protein) (Atrophin-1-related protein).

TFE2_HUMAN
NC score	0.028591 (rank : 432)	θ value	0.0148317 (rank : 261)
Query Neighborhood Hits	493	Target Neighborhood Hits	161	Shared Neighborhood Hits	29
SwissProt Accessions	P15923, P15883, Q14208, Q14635, Q14636, Q9UPI9	Gene names	TCF3, E2A, ITF1
Domain Architecture
Description	Transcription factor E2-alpha (Immunoglobulin enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Immunoglobulin transcription factor 1) (Transcription factor ITF-1) (Kappa-E2-binding factor).

C1QC_HUMAN
NC score	0.028513 (rank : 433)	θ value	0.21417 (rank : 299)
Query Neighborhood Hits	493	Target Neighborhood Hits	124	Shared Neighborhood Hits	30
SwissProt Accessions	P02747, Q7Z502, Q96DL2, Q96H05	Gene names	C1QC, C1QG
Domain Architecture
Description	Complement C1q subcomponent subunit C precursor.

LEF1_MOUSE
NC score	0.027670 (rank : 434)	θ value	0.0961366 (rank : 283)
Query Neighborhood Hits	493	Target Neighborhood Hits	161	Shared Neighborhood Hits	29
SwissProt Accessions	P27782	Gene names	Lef1, Lef-1
Domain Architecture
Description	Lymphoid enhancer-binding factor 1 (LEF-1).

CN032_MOUSE
NC score	0.027644 (rank : 435)	θ value	0.62314 (rank : 329)
Query Neighborhood Hits	493	Target Neighborhood Hits	233	Shared Neighborhood Hits	31
SwissProt Accessions	Q8BH93, Q3TF12, Q3TGL0, Q8CC90	Gene names
Domain Architecture	No domain graphic available
Description	Protein C14orf32 homolog.

PRP1_HUMAN
NC score	0.027578 (rank : 436)	θ value	0.125558 (rank : 291)
Query Neighborhood Hits	493	Target Neighborhood Hits	385	Shared Neighborhood Hits	41
SwissProt Accessions	P04280, Q08805, Q15186, Q15187, Q15214, Q15215, Q16038	Gene names	PRB1
Domain Architecture	No domain graphic available
Description	Basic salivary proline-rich protein 1 precursor (Salivary proline-rich protein) [Contains: Basic peptide IB-6; Peptide P-H].

LEF1_HUMAN
NC score	0.027214 (rank : 437)	θ value	0.0736092 (rank : 279)
Query Neighborhood Hits	493	Target Neighborhood Hits	150	Shared Neighborhood Hits	24
SwissProt Accessions	Q9UJU2, Q9HAZ0	Gene names	LEF1
Domain Architecture
Description	Lymphoid enhancer-binding factor 1 (LEF-1) (T cell-specific transcription factor 1-alpha) (TCF1-alpha).

EMID1_HUMAN
NC score	0.026850 (rank : 438)	θ value	0.47712 (rank : 325)
Query Neighborhood Hits	493	Target Neighborhood Hits	215	Shared Neighborhood Hits	41
SwissProt Accessions	Q96A84, Q6ICG1, Q86SS7	Gene names	EMID1, EMU1
Domain Architecture	No domain graphic available
Description	EMI domain-containing protein 1 precursor (Protein Emu1) (Emilin and multimerin domain-containing protein 1).

ANXA7_MOUSE
NC score	0.026256 (rank : 439)	θ value	0.0113563 (rank : 258)
Query Neighborhood Hits	493	Target Neighborhood Hits	142	Shared Neighborhood Hits	32
SwissProt Accessions	Q07076	Gene names	Anxa7, Anx7
Domain Architecture
Description	Annexin A7 (Annexin VII) (Synexin).

CO4A5_HUMAN
NC score	0.025752 (rank : 440)	θ value	1.06291 (rank : 349)
Query Neighborhood Hits	493	Target Neighborhood Hits	383	Shared Neighborhood Hits	57
SwissProt Accessions	P29400, Q16006, Q16126, Q6LD84	Gene names	COL4A5
Domain Architecture
Description	Collagen alpha-5(IV) chain precursor.

MUCDL_HUMAN
NC score	0.025537 (rank : 441)	θ value	1.81305 (rank : 376)
Query Neighborhood Hits	493	Target Neighborhood Hits	777	Shared Neighborhood Hits	99
SwissProt Accessions	Q9HBB8, Q9H746, Q9HAU3, Q9HBB5, Q9HBB6, Q9HBB7, Q9NX86, Q9NXI9	Gene names	MUCDHL
Domain Architecture
Description	Mucin and cadherin-like protein precursor (Mu-protocadherin).

COAA1_MOUSE
NC score	0.025525 (rank : 442)	θ value	1.38821 (rank : 362)
Query Neighborhood Hits	493	Target Neighborhood Hits	286	Shared Neighborhood Hits	57
SwissProt Accessions	Q05306	Gene names	Col10a1
Domain Architecture
Description	Collagen alpha-1(X) chain precursor.

TAF4_HUMAN
NC score	0.025209 (rank : 443)	θ value	0.62314 (rank : 333)
Query Neighborhood Hits	493	Target Neighborhood Hits	687	Shared Neighborhood Hits	51
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

COIA1_HUMAN
NC score	0.025105 (rank : 444)	θ value	1.81305 (rank : 373)
Query Neighborhood Hits	493	Target Neighborhood Hits	447	Shared Neighborhood Hits	72
SwissProt Accessions	P39060, Q9UK38, Q9Y6Q7, Q9Y6Q8	Gene names	COL18A1
Domain Architecture
Description	Collagen alpha-1(XVIII) chain precursor [Contains: Endostatin].

MAML1_MOUSE
NC score	0.025052 (rank : 445)	θ value	4.03905 (rank : 432)
Query Neighborhood Hits	493	Target Neighborhood Hits	279	Shared Neighborhood Hits	55
SwissProt Accessions	Q6T264, Q505D8, Q5SUC2, Q6PDK3, Q6ZQG5, Q8BIU5, Q8R3T0	Gene names	Maml1, Kiaa0200
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 1 (Mam-1).

CO6A1_HUMAN
NC score	0.024986 (rank : 446)	θ value	1.38821 (rank : 360)
Query Neighborhood Hits	493	Target Neighborhood Hits	264	Shared Neighborhood Hits	49
SwissProt Accessions	P12109, O00117, O00118, Q14040, Q14041, Q16258	Gene names	COL6A1
Domain Architecture
Description	Collagen alpha-1(VI) chain precursor.

F100A_HUMAN
NC score	0.024856 (rank : 447)	θ value	6.88961 (rank : 456)
Query Neighborhood Hits	493	Target Neighborhood Hits	39	Shared Neighborhood Hits	6
SwissProt Accessions	Q8TB05, Q71MF6	Gene names	FAM100A
Domain Architecture	No domain graphic available
Description	Protein FAM100A.

FMN2_MOUSE
NC score	0.024613 (rank : 448)	θ value	0.0961366 (rank : 282)
Query Neighborhood Hits	493	Target Neighborhood Hits	349	Shared Neighborhood Hits	36
SwissProt Accessions	Q9JL04	Gene names	Fmn2
Domain Architecture
Description	Formin-2.

SOX15_HUMAN
NC score	0.024601 (rank : 449)	θ value	0.0431538 (rank : 271)
Query Neighborhood Hits	493	Target Neighborhood Hits	134	Shared Neighborhood Hits	21
SwissProt Accessions	O60248, P35717, Q9Y6W7	Gene names	SOX15, SOX12, SOX20, SOX26, SOX27
Domain Architecture
Description	SOX-15 protein (SOX-20 protein) (SOX-12 protein).

GSCR1_HUMAN
NC score	0.024498 (rank : 450)	θ value	3.0926 (rank : 411)
Query Neighborhood Hits	493	Target Neighborhood Hits	674	Shared Neighborhood Hits	63
SwissProt Accessions	Q9NZM4	Gene names	GLTSCR1
Domain Architecture	No domain graphic available
Description	Glioma tumor suppressor candidate region gene 1 protein.

RIN3_MOUSE
NC score	0.023491 (rank : 451)	θ value	0.279714 (rank : 313)
Query Neighborhood Hits	493	Target Neighborhood Hits	239	Shared Neighborhood Hits	24
SwissProt Accessions	P59729	Gene names	Rin3
Domain Architecture
Description	Ras and Rab interactor 3 (Ras interaction/interference protein 3).

CO8A1_MOUSE
NC score	0.023214 (rank : 452)	θ value	1.38821 (rank : 361)
Query Neighborhood Hits	493	Target Neighborhood Hits	251	Shared Neighborhood Hits	45
SwissProt Accessions	Q00780, Q9D2V4	Gene names	Col8a1
Domain Architecture
Description	Collagen alpha-1(VIII) chain precursor.

CO8A2_HUMAN
NC score	0.022663 (rank : 453)	θ value	2.36792 (rank : 384)
Query Neighborhood Hits	493	Target Neighborhood Hits	299	Shared Neighborhood Hits	54
SwissProt Accessions	P25067, Q8TEJ5	Gene names	COL8A2
Domain Architecture
Description	Collagen alpha-2(VIII) chain precursor (Endothelial collagen).

COGA1_HUMAN
NC score	0.022362 (rank : 454)	θ value	8.99809 (rank : 476)
Query Neighborhood Hits	493	Target Neighborhood Hits	345	Shared Neighborhood Hits	51
SwissProt Accessions	Q07092	Gene names	COL16A1
Domain Architecture
Description	Collagen alpha-1(XVI) chain precursor.

PDC6I_HUMAN
NC score	0.022315 (rank : 455)	θ value	0.279714 (rank : 311)
Query Neighborhood Hits	493	Target Neighborhood Hits	278	Shared Neighborhood Hits	26
SwissProt Accessions	Q8WUM4, Q9BX86, Q9NUN0, Q9P2H2, Q9UKL5	Gene names	PDCD6IP, AIP1, ALIX, KIAA1375
Domain Architecture
Description	Programmed cell death 6-interacting protein (PDCD6-interacting protein) (ALG-2-interacting protein 1) (Hp95).

GNAS1_MOUSE
NC score	0.021288 (rank : 456)	θ value	1.38821 (rank : 366)
Query Neighborhood Hits	493	Target Neighborhood Hits	651	Shared Neighborhood Hits	104
SwissProt Accessions	Q6R0H7, Q6R0H4, Q6R0H5, Q6R2J5, Q9JJX0, Q9Z1N8	Gene names	Gnas, Gnas1
Domain Architecture	No domain graphic available
Description	Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas (Adenylate cyclase-stimulating G alpha protein) (Extra large alphas protein) (XLalphas).

SC24D_HUMAN
NC score	0.021000 (rank : 457)	θ value	0.47712 (rank : 327)
Query Neighborhood Hits	493	Target Neighborhood Hits	173	Shared Neighborhood Hits	28
SwissProt Accessions	O94855	Gene names	SEC24D, KIAA0755
Domain Architecture
Description	Protein transport protein Sec24D (SEC24-related protein D).

COAA1_HUMAN
NC score	0.020979 (rank : 458)	θ value	8.99809 (rank : 475)
Query Neighborhood Hits	493	Target Neighborhood Hits	316	Shared Neighborhood Hits	49
SwissProt Accessions	Q03692	Gene names	COL10A1
Domain Architecture
Description	Collagen alpha-1(X) chain precursor.

TFG_HUMAN
NC score	0.020479 (rank : 459)	θ value	4.03905 (rank : 440)
Query Neighborhood Hits	493	Target Neighborhood Hits	122	Shared Neighborhood Hits	12
SwissProt Accessions	Q92734, Q15656	Gene names	TFG
Domain Architecture
Description	Protein TFG (TRK-fused gene protein).

CYYR1_HUMAN
NC score	0.020438 (rank : 460)	θ value	5.27518 (rank : 445)
Query Neighborhood Hits	493	Target Neighborhood Hits	5	Shared Neighborhood Hits	3
SwissProt Accessions	Q96J86, Q96NV7	Gene names	CYYR1, C21orf95
Domain Architecture	No domain graphic available
Description	Cysteine and tyrosine-rich protein 1 precursor (Proline-rich domain- containing protein).

TNC6B_HUMAN
NC score	0.020349 (rank : 461)	θ value	0.62314 (rank : 335)
Query Neighborhood Hits	493	Target Neighborhood Hits	256	Shared Neighborhood Hits	32
SwissProt Accessions	Q9UPQ9, Q5TH52, Q8TBX2	Gene names	TNRC6B, KIAA1093
Domain Architecture
Description	Trinucleotide repeat-containing 6B protein.

TGON2_MOUSE
NC score	0.020323 (rank : 462)	θ value	0.62314 (rank : 334)
Query Neighborhood Hits	493	Target Neighborhood Hits	277	Shared Neighborhood Hits	19
SwissProt Accessions	Q62314	Gene names	Tgoln2, Ttgn2
Domain Architecture	No domain graphic available
Description	Trans-Golgi network integral membrane protein 2 precursor (TGN38B).

CPSF6_HUMAN
NC score	0.020168 (rank : 463)	θ value	1.38821 (rank : 363)
Query Neighborhood Hits	493	Target Neighborhood Hits	359	Shared Neighborhood Hits	44
SwissProt Accessions	Q16630, Q53ES1, Q9BSJ7, Q9BW18	Gene names	CPSF6, CFIM68
Domain Architecture	No domain graphic available
Description	Cleavage and polyadenylation specificity factor 6 (Cleavage and polyadenylation specificity factor 68 kDa subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor Im 68 kDa subunit) (Protein HPBRII- 4/7).

CPSF6_MOUSE
NC score	0.019681 (rank : 464)	θ value	1.38821 (rank : 364)
Query Neighborhood Hits	493	Target Neighborhood Hits	356	Shared Neighborhood Hits	44
SwissProt Accessions	Q6NVF9, Q8BX86, Q8BXI8	Gene names	Cpsf6
Domain Architecture	No domain graphic available
Description	Cleavage and polyadenylation specificity factor 6.

PRRT1_MOUSE
NC score	0.019532 (rank : 465)	θ value	6.88961 (rank : 462)
Query Neighborhood Hits	493	Target Neighborhood Hits	102	Shared Neighborhood Hits	17
SwissProt Accessions	O35449	Gene names	Prrt1, Ng5
Domain Architecture	No domain graphic available
Description	Proline-rich transmembrane protein 1.

SOX15_MOUSE
NC score	0.019229 (rank : 466)	θ value	0.125558 (rank : 295)
Query Neighborhood Hits	493	Target Neighborhood Hits	100	Shared Neighborhood Hits	14
SwissProt Accessions	P43267, O70204, P70418, Q62246, Q91V00, Q91V43, Q920T1, Q9JLG2	Gene names	Sox15, Sox-15
Domain Architecture
Description	SOX-15 protein.

SCAR3_MOUSE
NC score	0.018703 (rank : 467)	θ value	8.99809 (rank : 491)
Query Neighborhood Hits	493	Target Neighborhood Hits	239	Shared Neighborhood Hits	38
SwissProt Accessions	Q8C850, Q8C6N1	Gene names	Scara3
Domain Architecture	No domain graphic available
Description	Scavenger receptor class A member 3.

SF3B4_HUMAN
NC score	0.017910 (rank : 468)	θ value	0.125558 (rank : 293)
Query Neighborhood Hits	493	Target Neighborhood Hits	445	Shared Neighborhood Hits	46
SwissProt Accessions	Q15427	Gene names	SF3B4, SAP49
Domain Architecture
Description	Splicing factor 3B subunit 4 (Spliceosome-associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit).

ANXA7_HUMAN
NC score	0.017713 (rank : 469)	θ value	4.03905 (rank : 422)
Query Neighborhood Hits	493	Target Neighborhood Hits	168	Shared Neighborhood Hits	37
SwissProt Accessions	P20073	Gene names	ANXA7, ANX7, SNX
Domain Architecture
Description	Annexin A7 (Annexin VII) (Synexin).

WDR33_HUMAN
NC score	0.017491 (rank : 470)	θ value	0.00665767 (rank : 256)
Query Neighborhood Hits	493	Target Neighborhood Hits	638	Shared Neighborhood Hits	54
SwissProt Accessions	Q9C0J8	Gene names	WDR33, WDC146
Domain Architecture
Description	WD repeat protein 33 (WD repeat protein WDC146).

PLS1_MOUSE
NC score	0.017364 (rank : 471)	θ value	0.0252991 (rank : 265)
Query Neighborhood Hits	493	Target Neighborhood Hits	58	Shared Neighborhood Hits	10
SwissProt Accessions	Q9JJ00, O54730, O54731, Q9D1F8	Gene names	Plscr1, Tra1b, Tras1
Domain Architecture
Description	Phospholipid scramblase 1 (PL scramblase 1) (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (TRA1) (NOR1).

SOX30_MOUSE
NC score	0.017174 (rank : 472)	θ value	1.81305 (rank : 379)
Query Neighborhood Hits	493	Target Neighborhood Hits	374	Shared Neighborhood Hits	55
SwissProt Accessions	Q8CGW4	Gene names	Sox30
Domain Architecture
Description	Transcription factor SOX-30.

CIC_MOUSE
NC score	0.017160 (rank : 473)	θ value	5.27518 (rank : 443)
Query Neighborhood Hits	493	Target Neighborhood Hits	742	Shared Neighborhood Hits	77
SwissProt Accessions	Q924A2, Q6PDJ8, Q8CGE4, Q8CHH0, Q9CW61	Gene names	Cic, Kiaa0306
Domain Architecture	No domain graphic available
Description	Protein capicua homolog.

PEF1_MOUSE
NC score	0.016880 (rank : 474)	θ value	8.99809 (rank : 482)
Query Neighborhood Hits	493	Target Neighborhood Hits	112	Shared Neighborhood Hits	18
SwissProt Accessions	Q8BFY6, Q8VCT5, Q9CYW8, Q9D934	Gene names	Pef1
Domain Architecture	No domain graphic available
Description	Peflin (PEF protein with a long N-terminal hydrophobic domain) (Penta- EF hand domain-containing protein 1).

SYN2_HUMAN
NC score	0.016258 (rank : 475)	θ value	0.365318 (rank : 321)
Query Neighborhood Hits	493	Target Neighborhood Hits	213	Shared Neighborhood Hits	16
SwissProt Accessions	Q92777	Gene names	SYN2
Domain Architecture
Description	Synapsin-2 (Synapsin II).

MAML1_HUMAN
NC score	0.016127 (rank : 476)	θ value	3.0926 (rank : 412)
Query Neighborhood Hits	493	Target Neighborhood Hits	228	Shared Neighborhood Hits	25
SwissProt Accessions	Q92585, Q9NZ12	Gene names	MAML1, KIAA0200
Domain Architecture	No domain graphic available
Description	Mastermind-like protein 1 (Mam-1).

K0460_HUMAN
NC score	0.016102 (rank : 477)	θ value	0.813845 (rank : 341)
Query Neighborhood Hits	493	Target Neighborhood Hits	357	Shared Neighborhood Hits	23
SwissProt Accessions	Q5VT52, O75048, Q5VT53, Q6MZL4, Q86XD2	Gene names	KIAA0460
Domain Architecture	No domain graphic available
Description	Protein KIAA0460.

ANX11_MOUSE
NC score	0.015645 (rank : 478)	θ value	0.47712 (rank : 323)
Query Neighborhood Hits	493	Target Neighborhood Hits	200	Shared Neighborhood Hits	31
SwissProt Accessions	P97384	Gene names	Anxa11, Anx11
Domain Architecture
Description	Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50) (CAP-50).

PRRT1_HUMAN
NC score	0.015562 (rank : 479)	θ value	6.88961 (rank : 461)
Query Neighborhood Hits	493	Target Neighborhood Hits	94	Shared Neighborhood Hits	13
SwissProt Accessions	Q99946, Q96DW3, Q96NQ8	Gene names	PRRT1, C6orf31, NG5
Domain Architecture	No domain graphic available
Description	Proline-rich transmembrane protein 1.

PELP1_MOUSE
NC score	0.015479 (rank : 480)	θ value	6.88961 (rank : 460)
Query Neighborhood Hits	493	Target Neighborhood Hits	709	Shared Neighborhood Hits	88
SwissProt Accessions	Q9DBD5, Q5F2E2, Q6PEM0, Q91YM9	Gene names	Pelp1, Mnar
Domain Architecture	No domain graphic available
Description	Proline-, glutamic acid- and leucine-rich protein 1 (Modulator of nongenomic activity of estrogen receptor).

AUTS2_HUMAN
NC score	0.015232 (rank : 481)	θ value	2.36792 (rank : 382)
Query Neighborhood Hits	493	Target Neighborhood Hits	342	Shared Neighborhood Hits	29
SwissProt Accessions	Q8WXX7, Q9Y4F2	Gene names	AUTS2, KIAA0442
Domain Architecture	No domain graphic available
Description	Autism susceptibility gene 2 protein.

PDCD7_HUMAN
NC score	0.015071 (rank : 482)	θ value	8.99809 (rank : 481)
Query Neighborhood Hits	493	Target Neighborhood Hits	255	Shared Neighborhood Hits	16
SwissProt Accessions	Q8N8D1, Q96AK8, Q9Y6D7	Gene names	PDCD7
Domain Architecture	No domain graphic available
Description	Programmed cell death protein 7 (ES18) (HES18).

GR65_HUMAN
NC score	0.015023 (rank : 483)	θ value	4.03905 (rank : 427)
Query Neighborhood Hits	493	Target Neighborhood Hits	148	Shared Neighborhood Hits	27
SwissProt Accessions	Q9BQQ3, Q8N272, Q96H42	Gene names	GORASP1, GRASP65
Domain Architecture	No domain graphic available
Description	Golgi reassembly-stacking protein 1 (Golgi reassembly-stacking protein of 65 kDa) (GRASP65) (Golgi peripheral membrane protein p65) (Golgi phosphoprotein 5) (GOLPH5).

NCOR2_HUMAN
NC score	0.014618 (rank : 484)	θ value	1.06291 (rank : 355)
Query Neighborhood Hits	493	Target Neighborhood Hits	870	Shared Neighborhood Hits	59
SwissProt Accessions	Q9Y618, O00613, O15416, Q13354, Q9Y5U0	Gene names	NCOR2, CTG26
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC) (CTG repeat protein 26) (SMAP270).

IF4G3_MOUSE
NC score	0.014540 (rank : 485)	θ value	0.62314 (rank : 331)
Query Neighborhood Hits	493	Target Neighborhood Hits	279	Shared Neighborhood Hits	16
SwissProt Accessions	Q80XI3, Q80Y69, Q8BJ68, Q8BQF3, Q8C6Q3, Q8CIH0	Gene names	Eif4g3
Domain Architecture
Description	Eukaryotic translation initiation factor 4 gamma 3 (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII).

TFE2_MOUSE
NC score	0.014194 (rank : 486)	θ value	2.36792 (rank : 398)
Query Neighborhood Hits	493	Target Neighborhood Hits	118	Shared Neighborhood Hits	9
SwissProt Accessions	P15806, Q3U153, Q8CAH9, Q8VCY4, Q922S2, Q99MB8, Q9CYJ4	Gene names	Tcf3, Alf2, Me2, Tcfe2a
Domain Architecture	No domain graphic available
Description	Transcription factor E2-alpha (Immunoglobulin enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Transcription factor A1).

WASIP_HUMAN
NC score	0.014133 (rank : 487)	θ value	6.88961 (rank : 465)
Query Neighborhood Hits	493	Target Neighborhood Hits	458	Shared Neighborhood Hits	36
SwissProt Accessions	O43516, Q15220, Q6MZU9, Q9BU37, Q9UNP1	Gene names	WASPIP, WIP
Domain Architecture	No domain graphic available
Description	Wiskott-Aldrich syndrome protein-interacting protein (WASP-interacting protein) (PRPL-2 protein).

BORG5_HUMAN
NC score	0.014102 (rank : 488)	θ value	4.03905 (rank : 423)
Query Neighborhood Hits	493	Target Neighborhood Hits	135	Shared Neighborhood Hits	18
SwissProt Accessions	Q00587, Q96GN1	Gene names	CDC42EP1, BORG5, CEP1, MSE55
Domain Architecture
Description	Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum protein MSE55).

COEA1_HUMAN
NC score	0.013882 (rank : 489)	θ value	3.0926 (rank : 405)
Query Neighborhood Hits	493	Target Neighborhood Hits	427	Shared Neighborhood Hits	45
SwissProt Accessions	Q05707, O00260, O00261, O00262, Q05708, Q5XJ18, Q96C67	Gene names	COL14A1, UND
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(XIV) chain precursor (Undulin).

FIGN_HUMAN
NC score	0.013846 (rank : 490)	θ value	1.06291 (rank : 350)
Query Neighborhood Hits	493	Target Neighborhood Hits	176	Shared Neighborhood Hits	17
SwissProt Accessions	Q5HY92, Q9H6M5, Q9NVZ9	Gene names	FIGN
Domain Architecture	No domain graphic available
Description	Fidgetin.

ZMYM3_MOUSE
NC score	0.013598 (rank : 491)	θ value	0.62314 (rank : 336)
Query Neighborhood Hits	493	Target Neighborhood Hits	177	Shared Neighborhood Hits	9
SwissProt Accessions	Q9JLM4, Q80U17	Gene names	Zmym3, Kiaa0385, Zfp261, Znf261
Domain Architecture	No domain graphic available
Description	Zinc finger MYM-type protein 3 (Zinc finger protein 261) (DXHXS6673E protein).

TTDN1_MOUSE
NC score	0.013595 (rank : 492)	θ value	2.36792 (rank : 399)
Query Neighborhood Hits	493	Target Neighborhood Hits	26	Shared Neighborhood Hits	6
SwissProt Accessions	Q9D011	Gene names	Ttdn1
Domain Architecture	No domain graphic available
Description	TTD non-photosensitive 1 protein homolog.

ANX11_HUMAN
NC score	0.013533 (rank : 493)	θ value	8.99809 (rank : 471)
Query Neighborhood Hits	493	Target Neighborhood Hits	192	Shared Neighborhood Hits	28
SwissProt Accessions	P50995	Gene names	ANXA11, ANX11
Domain Architecture
Description	Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50) (CAP-50) (56 kDa autoantigen).

RBM22_HUMAN
NC score	0.013347 (rank : 494)	θ value	8.99809 (rank : 487)
Query Neighborhood Hits	493	Target Neighborhood Hits	189	Shared Neighborhood Hits	22
SwissProt Accessions	Q9NW64, O95607	Gene names	RBM22
Domain Architecture	No domain graphic available
Description	Pre-mRNA-splicing factor RBM22 (RNA-binding motif protein 22).

RBM22_MOUSE
NC score	0.013347 (rank : 495)	θ value	8.99809 (rank : 488)
Query Neighborhood Hits	493	Target Neighborhood Hits	189	Shared Neighborhood Hits	22
SwissProt Accessions	Q8BHS3, Q3TJB0, Q9CXA0	Gene names	Rbm22
Domain Architecture	No domain graphic available
Description	Pre-mRNA-splicing factor RBM22 (RNA-binding motif protein 22).

PDCD7_MOUSE
NC score	0.013232 (rank : 496)	θ value	6.88961 (rank : 459)
Query Neighborhood Hits	493	Target Neighborhood Hits	214	Shared Neighborhood Hits	13
SwissProt Accessions	Q9WTY1, Q8R5D9	Gene names	Pdcd7
Domain Architecture	No domain graphic available
Description	Programmed cell death protein 7 (ES18).

CS007_MOUSE
NC score	0.013000 (rank : 497)	θ value	2.36792 (rank : 385)
Query Neighborhood Hits	493	Target Neighborhood Hits	464	Shared Neighborhood Hits	46
SwissProt Accessions	Q6ZPZ3	Gene names	Kiaa1064
Domain Architecture	No domain graphic available
Description	Zinc finger CCCH domain-containing protein C19orf7 homolog.

MLL2_HUMAN
NC score	0.012747 (rank : 498)	θ value	4.03905 (rank : 434)
Query Neighborhood Hits	493	Target Neighborhood Hits	1788	Shared Neighborhood Hits	121
SwissProt Accessions	O14686, O14687	Gene names	MLL2, ALR
Domain Architecture
Description	Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein).

MN1_HUMAN
NC score	0.012394 (rank : 499)	θ value	5.27518 (rank : 448)
Query Neighborhood Hits	493	Target Neighborhood Hits	196	Shared Neighborhood Hits	23
SwissProt Accessions	Q10571	Gene names	MN1
Domain Architecture	No domain graphic available
Description	Probable tumor suppressor protein MN1.

SHAN1_HUMAN
NC score	0.011977 (rank : 500)	θ value	0.0563607 (rank : 275)
Query Neighborhood Hits	493	Target Neighborhood Hits	1041	Shared Neighborhood Hits	59
SwissProt Accessions	Q9Y566, Q9NYW9	Gene names	SHANK1
Domain Architecture
Description	SH3 and multiple ankyrin repeat domains protein 1 (Shank1) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP).

CEP68_MOUSE
NC score	0.011603 (rank : 501)	θ value	1.38821 (rank : 358)
Query Neighborhood Hits	493	Target Neighborhood Hits	62	Shared Neighborhood Hits	3
SwissProt Accessions	Q8C0D9, Q3US49, Q5SW85, Q8R2V0	Gene names	Cep68
Domain Architecture	No domain graphic available
Description	Centrosomal protein of 68 kDa (Cep68 protein).

FIGN_MOUSE
NC score	0.011545 (rank : 502)	θ value	2.36792 (rank : 387)
Query Neighborhood Hits	493	Target Neighborhood Hits	165	Shared Neighborhood Hits	20
SwissProt Accessions	Q9ERZ6, Q3TPB0, Q3UP57, Q6PCM0	Gene names	Fign
Domain Architecture	No domain graphic available
Description	Fidgetin.

COEA1_MOUSE
NC score	0.011477 (rank : 503)	θ value	1.81305 (rank : 372)
Query Neighborhood Hits	493	Target Neighborhood Hits	402	Shared Neighborhood Hits	46
SwissProt Accessions	Q80X19, Q8C6X3, Q9WV05	Gene names	Col14a1
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(XIV) chain precursor.

SOX17_MOUSE
NC score	0.011398 (rank : 504)	θ value	6.88961 (rank : 463)
Query Neighborhood Hits	493	Target Neighborhood Hits	223	Shared Neighborhood Hits	38
SwissProt Accessions	Q61473, Q61472, Q62248	Gene names	Sox17, Sox-17
Domain Architecture
Description	Transcription factor SOX-17.

RUSC2_MOUSE
NC score	0.010691 (rank : 505)	θ value	8.99809 (rank : 490)
Query Neighborhood Hits	493	Target Neighborhood Hits	305	Shared Neighborhood Hits	32
SwissProt Accessions	Q80U22, Q8R1D6	Gene names	Rusc2, Kiaa0375
Domain Architecture	No domain graphic available
Description	RUN and SH3 domain-containing protein 2.

NCOR2_MOUSE
NC score	0.010632 (rank : 506)	θ value	4.03905 (rank : 435)
Query Neighborhood Hits	493	Target Neighborhood Hits	790	Shared Neighborhood Hits	36
SwissProt Accessions	Q9WU42, Q9WU43, Q9WUC1	Gene names	Ncor2, Smrt
Domain Architecture
Description	Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor- associating factor) (TRAC).

WASP_MOUSE
NC score	0.010360 (rank : 507)	θ value	6.88961 (rank : 466)
Query Neighborhood Hits	493	Target Neighborhood Hits	223	Shared Neighborhood Hits	22
SwissProt Accessions	P70315	Gene names	Was, Wasp
Domain Architecture
Description	Wiskott-Aldrich syndrome protein homolog (WASp).

CS007_HUMAN
NC score	0.010252 (rank : 508)	θ value	1.38821 (rank : 365)
Query Neighborhood Hits	493	Target Neighborhood Hits	401	Shared Neighborhood Hits	30
SwissProt Accessions	Q9UPT8, Q9Y420	Gene names	C19orf7, KIAA1064
Domain Architecture	No domain graphic available
Description	Zinc finger CCCH domain-containing protein C19orf7.

SMRC2_MOUSE
NC score	0.010223 (rank : 509)	θ value	4.03905 (rank : 439)
Query Neighborhood Hits	493	Target Neighborhood Hits	487	Shared Neighborhood Hits	35
SwissProt Accessions	Q6PDG5, Q6P6P3	Gene names	Smarcc2, Baf170
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170).

SFPQ_MOUSE
NC score	0.009670 (rank : 510)	θ value	4.03905 (rank : 438)
Query Neighborhood Hits	493	Target Neighborhood Hits	958	Shared Neighborhood Hits	59
SwissProt Accessions	Q8VIJ6, Q9ERW2	Gene names	Sfpq
Domain Architecture	No domain graphic available
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).

ENAH_MOUSE
NC score	0.009070 (rank : 511)	θ value	2.36792 (rank : 386)
Query Neighborhood Hits	493	Target Neighborhood Hits	919	Shared Neighborhood Hits	44
SwissProt Accessions	Q03173, P70430, P70431, P70432, P70433, Q5D053	Gene names	Enah, Mena, Ndpp1
Domain Architecture
Description	Protein enabled homolog (NPC-derived proline-rich protein 1) (NDPP-1).

ILF3_HUMAN
NC score	0.008845 (rank : 512)	θ value	1.81305 (rank : 375)
Query Neighborhood Hits	493	Target Neighborhood Hits	68	Shared Neighborhood Hits	6
SwissProt Accessions	Q12906, O43409, Q6P1X1, Q86XY7, Q99544, Q99545, Q9BZH4, Q9BZH5, Q9NQ95, Q9NQ96, Q9NQ97, Q9NQ98, Q9NQ99, Q9NQA0, Q9NQA1, Q9NQA2, Q9NRN2, Q9NRN3, Q9NRN4, Q9UMZ9, Q9UN00, Q9UN84, Q9UNA2	Gene names	ILF3, DRBF, MPHOSPH4, NF90
Domain Architecture
Description	Interleukin enhancer-binding factor 3 (Nuclear factor of activated T- cells 90 kDa) (NF-AT-90) (Double-stranded RNA-binding protein 76) (DRBP76) (Translational control protein 80) (TCP80) (Nuclear factor associated with dsRNA) (NFAR) (M-phase phosphoprotein 4) (MPP4).

PP1RA_HUMAN
NC score	0.008843 (rank : 513)	θ value	4.03905 (rank : 437)
Query Neighborhood Hits	493	Target Neighborhood Hits	180	Shared Neighborhood Hits	23
SwissProt Accessions	Q96QC0, O00405	Gene names	PPP1R10, CAT53, FB19, PNUTS
Domain Architecture	No domain graphic available
Description	Serine/threonine-protein phosphatase 1 regulatory subunit 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline- rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99).

FMNL_MOUSE
NC score	0.008589 (rank : 514)	θ value	3.0926 (rank : 408)
Query Neighborhood Hits	493	Target Neighborhood Hits	428	Shared Neighborhood Hits	18
SwissProt Accessions	Q9JL26, Q6KAN4, Q9Z2V7	Gene names	Fmnl1, Frl
Domain Architecture	No domain graphic available
Description	Formin-like protein 1 (Formin-related protein).

FOXL2_MOUSE
NC score	0.008419 (rank : 515)	θ value	0.279714 (rank : 308)
Query Neighborhood Hits	493	Target Neighborhood Hits	151	Shared Neighborhood Hits	13
SwissProt Accessions	O88470, Q8K3X9	Gene names	Foxl2, Pfrk
Domain Architecture	No domain graphic available
Description	Forkhead box protein L2 (Pituitary forkhead factor) (P-Frk).

OPLA_MOUSE
NC score	0.008176 (rank : 516)	θ value	5.27518 (rank : 450)
Query Neighborhood Hits	493	Target Neighborhood Hits	14	Shared Neighborhood Hits	3
SwissProt Accessions	Q8K010, Q8R3K2	Gene names	Oplah
Domain Architecture
Description	5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase) (Pyroglutamase) (5- OPase).

EYA2_MOUSE
NC score	0.008109 (rank : 517)	θ value	1.81305 (rank : 374)
Query Neighborhood Hits	493	Target Neighborhood Hits	43	Shared Neighborhood Hits	6
SwissProt Accessions	O08575, P97925	Gene names	Eya2, Eab1
Domain Architecture
Description	Eyes absent homolog 2 (EC 3.1.3.48).

TPOR_HUMAN
NC score	0.008107 (rank : 518)	θ value	1.81305 (rank : 381)
Query Neighborhood Hits	493	Target Neighborhood Hits	70	Shared Neighborhood Hits	3
SwissProt Accessions	P40238	Gene names	MPL, TPOR
Domain Architecture
Description	Thrombopoietin receptor precursor (TPO-R) (Myeloproliferative leukemia protein) (C-mpl) (CD110 antigen).

SFPQ_HUMAN
NC score	0.007638 (rank : 519)	θ value	3.0926 (rank : 419)
Query Neighborhood Hits	493	Target Neighborhood Hits	986	Shared Neighborhood Hits	56
SwissProt Accessions	P23246, P30808	Gene names	SFPQ, PSF
Domain Architecture
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).

HCN2_HUMAN
NC score	0.007357 (rank : 520)	θ value	1.06291 (rank : 352)
Query Neighborhood Hits	493	Target Neighborhood Hits	369	Shared Neighborhood Hits	43
SwissProt Accessions	Q9UL51, O60742, O60743, O75267, Q9UBS2	Gene names	HCN2, BCNG2
Domain Architecture
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 (Brain cyclic nucleotide-gated channel 2) (BCNG-2).

TARA_HUMAN
NC score	0.006981 (rank : 521)	θ value	6.88961 (rank : 464)
Query Neighborhood Hits	493	Target Neighborhood Hits	1626	Shared Neighborhood Hits	95
SwissProt Accessions	Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4	Gene names	TRIOBP, KIAA1662, TARA
Domain Architecture
Description	TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

ZN750_MOUSE
NC score	0.006749 (rank : 522)	θ value	5.27518 (rank : 454)
Query Neighborhood Hits	493	Target Neighborhood Hits	346	Shared Neighborhood Hits	30
SwissProt Accessions	Q8BH05, Q66JP3, Q8C0L1	Gene names	Znf750
Domain Architecture	No domain graphic available
Description	Protein ZNF750.

FOXL2_HUMAN
NC score	0.006496 (rank : 523)	θ value	1.06291 (rank : 351)
Query Neighborhood Hits	493	Target Neighborhood Hits	142	Shared Neighborhood Hits	9
SwissProt Accessions	P58012, Q4ZGJ3	Gene names	FOXL2
Domain Architecture
Description	Forkhead box protein L2.

GP108_HUMAN
NC score	0.005972 (rank : 524)	θ value	3.0926 (rank : 410)
Query Neighborhood Hits	493	Target Neighborhood Hits	17	Shared Neighborhood Hits	2
SwissProt Accessions	Q9NPR9	Gene names	GPR108
Domain Architecture	No domain graphic available
Description	Protein GPR108 precursor.

PTPRN_HUMAN
NC score	0.005446 (rank : 525)	θ value	0.125558 (rank : 292)
Query Neighborhood Hits	493	Target Neighborhood Hits	156	Shared Neighborhood Hits	8
SwissProt Accessions	Q16849, Q08319	Gene names	PTPRN, ICA3, ICA512
Domain Architecture
Description	Receptor-type tyrosine-protein phosphatase-like N precursor (R-PTP-N) (PTP IA-2) (Islet cell antigen 512) (ICA 512) (Islet cell autoantigen 3).

AXN2_MOUSE
NC score	0.005406 (rank : 526)	θ value	6.88961 (rank : 455)
Query Neighborhood Hits	493	Target Neighborhood Hits	116	Shared Neighborhood Hits	15
SwissProt Accessions	O88566, Q9QXJ6	Gene names	Axin2
Domain Architecture
Description	Axin-2 (Axis inhibition protein 2) (Conductin) (Axin-like protein) (Axil).

DAZP1_MOUSE
NC score	0.004406 (rank : 527)	θ value	3.0926 (rank : 407)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	25
SwissProt Accessions	Q9JII5	Gene names	Dazap1
Domain Architecture
Description	DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1).

SIM2_HUMAN
NC score	0.004251 (rank : 528)	θ value	2.36792 (rank : 396)
Query Neighborhood Hits	493	Target Neighborhood Hits	76	Shared Neighborhood Hits	7
SwissProt Accessions	Q14190, O60766, Q15470, Q15471, Q15472, Q15473, Q16532	Gene names	SIM2
Domain Architecture
Description	Single-minded homolog 2.

MINT_HUMAN
NC score	0.003457 (rank : 529)	θ value	4.03905 (rank : 433)
Query Neighborhood Hits	493	Target Neighborhood Hits	1291	Shared Neighborhood Hits	58
SwissProt Accessions	Q96T58, Q9H9A8, Q9NWH5, Q9UQ01, Q9Y556	Gene names	SPEN, KIAA0929, MINT, SHARP
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

DAZP1_HUMAN
NC score	0.003313 (rank : 530)	θ value	3.0926 (rank : 406)
Query Neighborhood Hits	493	Target Neighborhood Hits	313	Shared Neighborhood Hits	24
SwissProt Accessions	Q96EP5, Q96MJ3, Q9NRR9	Gene names	DAZAP1
Domain Architecture
Description	DAZ-associated protein 1 (Deleted in azoospermia-associated protein 1).

MYO15_HUMAN
NC score	0.003133 (rank : 531)	θ value	8.99809 (rank : 478)
Query Neighborhood Hits	493	Target Neighborhood Hits	671	Shared Neighborhood Hits	89
SwissProt Accessions	Q9UKN7	Gene names	MYO15A, MYO15
Domain Architecture
Description	Myosin-15 (Myosin XV) (Unconventional myosin-15).

FOXJ3_MOUSE
NC score	0.003003 (rank : 532)	θ value	8.99809 (rank : 477)
Query Neighborhood Hits	493	Target Neighborhood Hits	190	Shared Neighborhood Hits	17
SwissProt Accessions	Q8BUR3, Q3UTD8	Gene names	Foxj3, Kiaa1041
Domain Architecture
Description	Forkhead box protein J3.

NECD_HUMAN
NC score	0.002544 (rank : 533)	θ value	4.03905 (rank : 436)
Query Neighborhood Hits	493	Target Neighborhood Hits	82	Shared Neighborhood Hits	8
SwissProt Accessions	Q99608	Gene names	NDN
Domain Architecture
Description	Necdin.

FOXO1_HUMAN
NC score	0.002038 (rank : 534)	θ value	3.0926 (rank : 409)
Query Neighborhood Hits	493	Target Neighborhood Hits	126	Shared Neighborhood Hits	7
SwissProt Accessions	Q12778, O43523, Q5VYC7, Q6NSK6	Gene names	FOXO1A, FKHR
Domain Architecture
Description	Forkhead box protein O1A (Forkhead in rhabdomyosarcoma).

ABP1_HUMAN
NC score	0.001764 (rank : 535)	θ value	8.99809 (rank : 470)
Query Neighborhood Hits	493	Target Neighborhood Hits	13	Shared Neighborhood Hits	3
SwissProt Accessions	P19801, Q16683, Q16684, Q56II4, Q6GU42	Gene names	ABP1, AOC1, DAO1
Domain Architecture
Description	Amiloride-sensitive amine oxidase [copper-containing] precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) (Kidney amine oxidase) (KAO).

DIAP1_HUMAN
NC score	0.001712 (rank : 536)	θ value	5.27518 (rank : 446)
Query Neighborhood Hits	493	Target Neighborhood Hits	784	Shared Neighborhood Hits	33
SwissProt Accessions	O60610, Q9UC76	Gene names	DIAPH1, DIAP1
Domain Architecture
Description	Protein diaphanous homolog 1 (Diaphanous-related formin-1) (DRF1).

MYCN_HUMAN
NC score	0.001649 (rank : 537)	θ value	5.27518 (rank : 449)
Query Neighborhood Hits	493	Target Neighborhood Hits	127	Shared Neighborhood Hits	6
SwissProt Accessions	P04198, Q6LDT9	Gene names	MYCN, NMYC
Domain Architecture
Description	N-myc proto-oncogene protein.

DIAP1_MOUSE
NC score	0.000670 (rank : 538)	θ value	4.03905 (rank : 425)
Query Neighborhood Hits	493	Target Neighborhood Hits	839	Shared Neighborhood Hits	35
SwissProt Accessions	O08808	Gene names	Diaph1, Diap1
Domain Architecture
Description	Protein diaphanous homolog 1 (Diaphanous-related formin-1) (DRF1) (mDIA1) (p140mDIA).

REPS1_HUMAN
NC score	0.000063 (rank : 539)	θ value	8.99809 (rank : 489)
Query Neighborhood Hits	493	Target Neighborhood Hits	205	Shared Neighborhood Hits	8
SwissProt Accessions	Q96D71, Q8NDR7, Q8WU62, Q9BXY9	Gene names	REPS1
Domain Architecture
Description	RalBP1-associated Eps domain-containing protein 1 (RalBP1-interacting protein 1).

ABI2_HUMAN
NC score	-0.000270 (rank : 540)	θ value	8.99809 (rank : 468)
Query Neighborhood Hits	493	Target Neighborhood Hits	350	Shared Neighborhood Hits	20
SwissProt Accessions	Q9NYB9, Q13147, Q13249, Q13801, Q9BV70	Gene names	ABI2, ARGBPIA
Domain Architecture	No domain graphic available
Description	Abl interactor 2 (Abelson interactor 2) (Abi-2) (Abl-binding protein 3) (AblBP3) (Arg-binding protein 1) (ArgBP1).

KCNC3_MOUSE
NC score	-0.000323 (rank : 541)	θ value	4.03905 (rank : 430)
Query Neighborhood Hits	493	Target Neighborhood Hits	173	Shared Neighborhood Hits	8
SwissProt Accessions	Q63959, Q62088	Gene names	Kcnc3
Domain Architecture
Description	Potassium voltage-gated channel subfamily C member 3 (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID).

ASPP1_MOUSE
NC score	-0.000832 (rank : 542)	θ value	5.27518 (rank : 442)
Query Neighborhood Hits	493	Target Neighborhood Hits	1244	Shared Neighborhood Hits	73
SwissProt Accessions	Q62415	Gene names	Ppp1r13b, Aspp1
Domain Architecture
Description	Apoptosis-stimulating of p53 protein 1 (Protein phosphatase 1 regulatory subunit 13B).

ABI2_MOUSE
NC score	-0.002082 (rank : 543)	θ value	8.99809 (rank : 469)
Query Neighborhood Hits	493	Target Neighborhood Hits	266	Shared Neighborhood Hits	11
SwissProt Accessions	P62484, Q6PHU3	Gene names	Abi2
Domain Architecture	No domain graphic available
Description	Abl interactor 2 (Abelson interactor 2) (Abi-2).

FOG1_MOUSE
NC score	-0.004730 (rank : 544)	θ value	4.03905 (rank : 426)
Query Neighborhood Hits	493	Target Neighborhood Hits	1237	Shared Neighborhood Hits	86
SwissProt Accessions	O35615	Gene names	Zfpm1, Fog, Fog1
Domain Architecture	No domain graphic available
Description	Zinc finger protein ZFPM1 (Zinc finger protein multitype 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1).

TMPS2_HUMAN
NC score	-0.005108 (rank : 545)	θ value	5.27518 (rank : 453)
Query Neighborhood Hits	493	Target Neighborhood Hits	252	Shared Neighborhood Hits	9
SwissProt Accessions	O15393, Q9BXX1	Gene names	TMPRSS2, PRSS10
Domain Architecture
Description	Transmembrane protease, serine 2 precursor (EC 3.4.21.-) [Contains: Transmembrane protease, serine 2 non-catalytic chain; Transmembrane protease, serine 2 catalytic chain].

SREC_HUMAN
NC score	-0.005635 (rank : 546)	θ value	5.27518 (rank : 452)
Query Neighborhood Hits	493	Target Neighborhood Hits	645	Shared Neighborhood Hits	29
SwissProt Accessions	Q14162, O43701	Gene names	SCARF1, KIAA0149, SREC
Domain Architecture	No domain graphic available
Description	Endothelial cells scavenger receptor precursor (Acetyl LDL receptor) (Scavenger receptor class F member 1).

LTBP4_MOUSE
NC score	-0.005965 (rank : 547)	θ value	4.03905 (rank : 431)
Query Neighborhood Hits	493	Target Neighborhood Hits	607	Shared Neighborhood Hits	22
SwissProt Accessions	Q8K4G1, Q8K4G0	Gene names	Ltbp4
Domain Architecture
Description	Latent-transforming growth factor beta-binding protein 4 precursor (LTBP-4).

PCDG1_HUMAN
NC score	-0.006063 (rank : 548)	θ value	8.99809 (rank : 480)
Query Neighborhood Hits	493	Target Neighborhood Hits	158	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y5H4, Q9Y5D6	Gene names	PCDHGA1
Domain Architecture
Description	Protocadherin gamma A1 precursor (PCDH-gamma-A1).

NEO1_HUMAN
NC score	-0.006323 (rank : 549)	θ value	8.99809 (rank : 479)
Query Neighborhood Hits	493	Target Neighborhood Hits	530	Shared Neighborhood Hits	9
SwissProt Accessions	Q92859, O00340	Gene names	NEO1, NGN
Domain Architecture
Description	Neogenin precursor.

OBSCN_HUMAN
NC score	-0.009089 (rank : 550)	θ value	0.163984 (rank : 297)
Query Neighborhood Hits	493	Target Neighborhood Hits	1931	Shared Neighborhood Hits	89
SwissProt Accessions	Q5VST9, Q2A664, Q5T7G8, Q5T7G9, Q5VSU2, Q86YC7, Q8NHN0, Q8NHN1, Q8NHN2, Q8NHN4, Q8NHN5, Q8NHN6, Q8NHN7, Q8NHN8, Q8NHN9, Q96AA2, Q9HCD3, Q9HCL6	Gene names	OBSCN, KIAA1556, KIAA1639
Domain Architecture	No domain graphic available
Description	Obscurin (Obscurin-myosin light chain kinase) (Obscurin-MLCK) (Obscurin-RhoGEF).

SPEG_MOUSE
NC score	-0.010936 (rank : 551)	θ value	1.38821 (rank : 371)
Query Neighborhood Hits	493	Target Neighborhood Hits	1959	Shared Neighborhood Hits	82
SwissProt Accessions	Q62407, Q3TPH8, Q6P5V1, Q80TF7, Q80ZN0, Q8BZF4, Q9EQJ5	Gene names	Speg, Apeg1, Kiaa1297
Domain Architecture
Description	Striated muscle-specific serine/threonine protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

GLI1_MOUSE
NC score	-0.011098 (rank : 552)	θ value	2.36792 (rank : 388)
Query Neighborhood Hits	493	Target Neighborhood Hits	785	Shared Neighborhood Hits	18
SwissProt Accessions	P47806, Q9QYK1	Gene names	Gli1, Gli
Domain Architecture	No domain graphic available
Description	Zinc finger protein GLI1 (Glioma-associated oncogene homolog).

SALL3_HUMAN
NC score	-0.011359 (rank : 553)	θ value	3.0926 (rank : 418)
Query Neighborhood Hits	493	Target Neighborhood Hits	1066	Shared Neighborhood Hits	45
SwissProt Accessions	Q9BXA9, Q9UGH1	Gene names	SALL3
Domain Architecture	No domain graphic available
Description	Sal-like protein 3 (Zinc finger protein SALL3) (hSALL3).