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Network neighborhood for query Sequence : TGIF_HUMAN

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TGIF_HUMAN
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

TGIF_HUMAN
θ value	0 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	109	Target Neighborhood Hits	109	Shared Neighborhood Hits	109
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF_MOUSE
θ value	5.26011e-125 (rank : 2)	NC score	0.986280 (rank : 2)
Query Neighborhood Hits	109	Target Neighborhood Hits	125	Shared Neighborhood Hits	76
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF2_MOUSE
θ value	4.25575e-50 (rank : 3)	NC score	0.944705 (rank : 4)
Query Neighborhood Hits	109	Target Neighborhood Hits	127	Shared Neighborhood Hits	67
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF2_HUMAN
θ value	1.04822e-48 (rank : 4)	NC score	0.951049 (rank : 3)
Query Neighborhood Hits	109	Target Neighborhood Hits	94	Shared Neighborhood Hits	66
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TF2LX_HUMAN
θ value	1.62847e-25 (rank : 5)	NC score	0.901235 (rank : 5)
Query Neighborhood Hits	109	Target Neighborhood Hits	108	Shared Neighborhood Hits	66
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

TF2LY_HUMAN
θ value	3.62785e-25 (rank : 6)	NC score	0.899723 (rank : 6)
Query Neighborhood Hits	109	Target Neighborhood Hits	90	Shared Neighborhood Hits	63
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

PKNX2_HUMAN
θ value	5.8054e-15 (rank : 7)	NC score	0.755534 (rank : 7)
Query Neighborhood Hits	109	Target Neighborhood Hits	133	Shared Neighborhood Hits	63
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX2_MOUSE
θ value	5.8054e-15 (rank : 8)	NC score	0.749001 (rank : 9)
Query Neighborhood Hits	109	Target Neighborhood Hits	197	Shared Neighborhood Hits	66
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

MEIS3_MOUSE
θ value	6.41864e-14 (rank : 9)	NC score	0.740057 (rank : 11)
Query Neighborhood Hits	109	Target Neighborhood Hits	118	Shared Neighborhood Hits	61
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS3_HUMAN
θ value	1.42992e-13 (rank : 10)	NC score	0.737145 (rank : 12)
Query Neighborhood Hits	109	Target Neighborhood Hits	118	Shared Neighborhood Hits	60
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

PKNX1_HUMAN
θ value	3.18553e-13 (rank : 11)	NC score	0.746984 (rank : 10)
Query Neighborhood Hits	109	Target Neighborhood Hits	101	Shared Neighborhood Hits	58
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

PKNX1_MOUSE
θ value	3.18553e-13 (rank : 12)	NC score	0.749073 (rank : 8)
Query Neighborhood Hits	109	Target Neighborhood Hits	103	Shared Neighborhood Hits	59
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

MEIS1_HUMAN
θ value	2.69671e-12 (rank : 13)	NC score	0.719697 (rank : 14)
Query Neighborhood Hits	109	Target Neighborhood Hits	115	Shared Neighborhood Hits	63
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS1_MOUSE
θ value	2.69671e-12 (rank : 14)	NC score	0.719705 (rank : 13)
Query Neighborhood Hits	109	Target Neighborhood Hits	115	Shared Neighborhood Hits	63
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS2_HUMAN
θ value	7.84624e-12 (rank : 15)	NC score	0.703590 (rank : 15)
Query Neighborhood Hits	109	Target Neighborhood Hits	182	Shared Neighborhood Hits	60
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
θ value	7.84624e-12 (rank : 16)	NC score	0.701109 (rank : 16)
Query Neighborhood Hits	109	Target Neighborhood Hits	208	Shared Neighborhood Hits	61
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

IRX6_MOUSE
θ value	1.63604e-09 (rank : 17)	NC score	0.626878 (rank : 18)
Query Neighborhood Hits	109	Target Neighborhood Hits	256	Shared Neighborhood Hits	62
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX4_MOUSE
θ value	2.13673e-09 (rank : 18)	NC score	0.624632 (rank : 19)
Query Neighborhood Hits	109	Target Neighborhood Hits	286	Shared Neighborhood Hits	66
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX4_HUMAN
θ value	2.79066e-09 (rank : 19)	NC score	0.627949 (rank : 17)
Query Neighborhood Hits	109	Target Neighborhood Hits	276	Shared Neighborhood Hits	67
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX6_HUMAN
θ value	1.80886e-08 (rank : 20)	NC score	0.623995 (rank : 20)
Query Neighborhood Hits	109	Target Neighborhood Hits	262	Shared Neighborhood Hits	65
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX3_HUMAN
θ value	4.0297e-08 (rank : 21)	NC score	0.618810 (rank : 24)
Query Neighborhood Hits	109	Target Neighborhood Hits	342	Shared Neighborhood Hits	66
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_MOUSE
θ value	4.0297e-08 (rank : 22)	NC score	0.619485 (rank : 23)
Query Neighborhood Hits	109	Target Neighborhood Hits	303	Shared Neighborhood Hits	64
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX1_HUMAN
θ value	5.26297e-08 (rank : 23)	NC score	0.621059 (rank : 22)
Query Neighborhood Hits	109	Target Neighborhood Hits	285	Shared Neighborhood Hits	61
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_MOUSE
θ value	5.26297e-08 (rank : 24)	NC score	0.622248 (rank : 21)
Query Neighborhood Hits	109	Target Neighborhood Hits	269	Shared Neighborhood Hits	63
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX2_HUMAN
θ value	2.61198e-07 (rank : 25)	NC score	0.586330 (rank : 28)
Query Neighborhood Hits	109	Target Neighborhood Hits	358	Shared Neighborhood Hits	67
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX2_MOUSE
θ value	2.61198e-07 (rank : 26)	NC score	0.600602 (rank : 25)
Query Neighborhood Hits	109	Target Neighborhood Hits	264	Shared Neighborhood Hits	62
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX5_HUMAN
θ value	2.61198e-07 (rank : 27)	NC score	0.594015 (rank : 26)
Query Neighborhood Hits	109	Target Neighborhood Hits	362	Shared Neighborhood Hits	63
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

IRX5_MOUSE
θ value	2.61198e-07 (rank : 28)	NC score	0.591268 (rank : 27)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	62
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

PBX3_HUMAN
θ value	4.45536e-07 (rank : 29)	NC score	0.536447 (rank : 35)
Query Neighborhood Hits	109	Target Neighborhood Hits	306	Shared Neighborhood Hits	74
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_MOUSE
θ value	4.45536e-07 (rank : 30)	NC score	0.536478 (rank : 34)
Query Neighborhood Hits	109	Target Neighborhood Hits	306	Shared Neighborhood Hits	74
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX1_HUMAN
θ value	7.59969e-07 (rank : 31)	NC score	0.536675 (rank : 32)
Query Neighborhood Hits	109	Target Neighborhood Hits	317	Shared Neighborhood Hits	76
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
θ value	7.59969e-07 (rank : 32)	NC score	0.536675 (rank : 33)
Query Neighborhood Hits	109	Target Neighborhood Hits	317	Shared Neighborhood Hits	76
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PBX2_HUMAN
θ value	7.59969e-07 (rank : 33)	NC score	0.536997 (rank : 31)
Query Neighborhood Hits	109	Target Neighborhood Hits	350	Shared Neighborhood Hits	76
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX2_MOUSE
θ value	7.59969e-07 (rank : 34)	NC score	0.537158 (rank : 30)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	76
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

PBX4_MOUSE
θ value	1.69304e-06 (rank : 35)	NC score	0.553726 (rank : 29)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	75
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

SIX2_MOUSE
θ value	9.29e-05 (rank : 36)	NC score	0.418906 (rank : 36)
Query Neighborhood Hits	109	Target Neighborhood Hits	376	Shared Neighborhood Hits	80
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX1_HUMAN
θ value	0.000158464 (rank : 37)	NC score	0.409348 (rank : 39)
Query Neighborhood Hits	109	Target Neighborhood Hits	343	Shared Neighborhood Hits	78
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_MOUSE
θ value	0.000158464 (rank : 38)	NC score	0.409545 (rank : 38)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	78
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX2_HUMAN
θ value	0.00134147 (rank : 39)	NC score	0.414868 (rank : 37)
Query Neighborhood Hits	109	Target Neighborhood Hits	345	Shared Neighborhood Hits	80
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

HXD10_MOUSE
θ value	0.00298849 (rank : 40)	NC score	0.111546 (rank : 54)
Query Neighborhood Hits	109	Target Neighborhood Hits	392	Shared Neighborhood Hits	59
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HXD10_HUMAN
θ value	0.00869519 (rank : 41)	NC score	0.110268 (rank : 55)
Query Neighborhood Hits	109	Target Neighborhood Hits	392	Shared Neighborhood Hits	59
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

CUTL2_MOUSE
θ value	0.0113563 (rank : 42)	NC score	0.167867 (rank : 52)
Query Neighborhood Hits	109	Target Neighborhood Hits	771	Shared Neighborhood Hits	61
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_HUMAN
θ value	0.0252991 (rank : 43)	NC score	0.156001 (rank : 53)
Query Neighborhood Hits	109	Target Neighborhood Hits	906	Shared Neighborhood Hits	65
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

SIX4_HUMAN
θ value	0.0330416 (rank : 44)	NC score	0.348222 (rank : 45)
Query Neighborhood Hits	109	Target Neighborhood Hits	342	Shared Neighborhood Hits	66
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX4_MOUSE
θ value	0.0330416 (rank : 45)	NC score	0.351042 (rank : 44)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	70
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

SIX5_HUMAN
θ value	0.0431538 (rank : 46)	NC score	0.346075 (rank : 46)
Query Neighborhood Hits	109	Target Neighborhood Hits	386	Shared Neighborhood Hits	68
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX3_HUMAN
θ value	0.0736092 (rank : 47)	NC score	0.358336 (rank : 41)
Query Neighborhood Hits	109	Target Neighborhood Hits	285	Shared Neighborhood Hits	72
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
θ value	0.0736092 (rank : 48)	NC score	0.358289 (rank : 42)
Query Neighborhood Hits	109	Target Neighborhood Hits	289	Shared Neighborhood Hits	72
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX6_HUMAN
θ value	0.0736092 (rank : 49)	NC score	0.358062 (rank : 43)
Query Neighborhood Hits	109	Target Neighborhood Hits	269	Shared Neighborhood Hits	69
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

SIX6_MOUSE
θ value	0.0736092 (rank : 50)	NC score	0.359386 (rank : 40)
Query Neighborhood Hits	109	Target Neighborhood Hits	267	Shared Neighborhood Hits	69
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

HXC10_HUMAN
θ value	0.125558 (rank : 51)	NC score	0.102713 (rank : 58)
Query Neighborhood Hits	109	Target Neighborhood Hits	417	Shared Neighborhood Hits	59
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HXC10_MOUSE
θ value	0.163984 (rank : 52)	NC score	0.103576 (rank : 57)
Query Neighborhood Hits	109	Target Neighborhood Hits	417	Shared Neighborhood Hits	59
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXD11_HUMAN
θ value	0.21417 (rank : 53)	NC score	0.085908 (rank : 65)
Query Neighborhood Hits	109	Target Neighborhood Hits	353	Shared Neighborhood Hits	55
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

HNF6_HUMAN
θ value	0.365318 (rank : 54)	NC score	0.172024 (rank : 48)
Query Neighborhood Hits	109	Target Neighborhood Hits	127	Shared Neighborhood Hits	38
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

HNF6_MOUSE
θ value	0.365318 (rank : 55)	NC score	0.169032 (rank : 50)
Query Neighborhood Hits	109	Target Neighborhood Hits	124	Shared Neighborhood Hits	38
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

TARA_HUMAN
θ value	0.47712 (rank : 56)	NC score	0.020741 (rank : 231)
Query Neighborhood Hits	109	Target Neighborhood Hits	1626	Shared Neighborhood Hits	21
SwissProt Accessions	Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4	Gene names	TRIOBP, KIAA1662, TARA
Domain Architecture
Description	TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

ZN750_MOUSE
θ value	0.47712 (rank : 57)	NC score	0.035224 (rank : 219)
Query Neighborhood Hits	109	Target Neighborhood Hits	346	Shared Neighborhood Hits	13
SwissProt Accessions	Q8BH05, Q66JP3, Q8C0L1	Gene names	Znf750
Domain Architecture	No domain graphic available
Description	Protein ZNF750.

HXA10_HUMAN
θ value	0.62314 (rank : 58)	NC score	0.090024 (rank : 62)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	53
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXA10_MOUSE
θ value	0.62314 (rank : 59)	NC score	0.089187 (rank : 63)
Query Neighborhood Hits	109	Target Neighborhood Hits	365	Shared Neighborhood Hits	53
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

LBX1_MOUSE
θ value	0.62314 (rank : 60)	NC score	0.093970 (rank : 61)
Query Neighborhood Hits	109	Target Neighborhood Hits	349	Shared Neighborhood Hits	64
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

MEOX1_HUMAN
θ value	0.62314 (rank : 61)	NC score	0.050860 (rank : 207)
Query Neighborhood Hits	109	Target Neighborhood Hits	342	Shared Neighborhood Hits	44
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

SIX5_MOUSE
θ value	0.62314 (rank : 62)	NC score	0.336030 (rank : 47)
Query Neighborhood Hits	109	Target Neighborhood Hits	354	Shared Neighborhood Hits	66
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

ATBF1_HUMAN
θ value	1.06291 (rank : 63)	NC score	0.060287 (rank : 147)
Query Neighborhood Hits	109	Target Neighborhood Hits	1547	Shared Neighborhood Hits	74
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

ATBF1_MOUSE
θ value	1.06291 (rank : 64)	NC score	0.059578 (rank : 151)
Query Neighborhood Hits	109	Target Neighborhood Hits	1841	Shared Neighborhood Hits	76
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

LBX1_HUMAN
θ value	1.06291 (rank : 65)	NC score	0.094094 (rank : 60)
Query Neighborhood Hits	109	Target Neighborhood Hits	357	Shared Neighborhood Hits	66
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

HMBX1_HUMAN
θ value	1.38821 (rank : 66)	NC score	0.094572 (rank : 59)
Query Neighborhood Hits	109	Target Neighborhood Hits	118	Shared Neighborhood Hits	28
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

ONEC2_HUMAN
θ value	1.38821 (rank : 67)	NC score	0.169693 (rank : 49)
Query Neighborhood Hits	109	Target Neighborhood Hits	115	Shared Neighborhood Hits	39
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

ONEC2_MOUSE
θ value	1.38821 (rank : 68)	NC score	0.167931 (rank : 51)
Query Neighborhood Hits	109	Target Neighborhood Hits	123	Shared Neighborhood Hits	39
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

WNK2_HUMAN
θ value	1.38821 (rank : 69)	NC score	0.001076 (rank : 249)
Query Neighborhood Hits	109	Target Neighborhood Hits	1407	Shared Neighborhood Hits	23
SwissProt Accessions	Q9Y3S1, Q8IY36, Q9C0A3, Q9H3P4	Gene names	WNK2, KIAA1760, PRKWNK2
Domain Architecture
Description	Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2).

HXA4_MOUSE
θ value	1.81305 (rank : 70)	NC score	0.055996 (rank : 176)
Query Neighborhood Hits	109	Target Neighborhood Hits	379	Shared Neighborhood Hits	51
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

MUC7_HUMAN
θ value	1.81305 (rank : 71)	NC score	0.020093 (rank : 232)
Query Neighborhood Hits	109	Target Neighborhood Hits	538	Shared Neighborhood Hits	14
SwissProt Accessions	Q8TAX7	Gene names	MUC7, MG2
Domain Architecture	No domain graphic available
Description	Mucin-7 precursor (MUC-7) (Salivary mucin-7) (Apo-MG2).

FXL19_MOUSE
θ value	2.36792 (rank : 72)	NC score	0.019298 (rank : 234)
Query Neighborhood Hits	109	Target Neighborhood Hits	217	Shared Neighborhood Hits	4
SwissProt Accessions	Q6PB97, Q7TSH0, Q8BIB4	Gene names	Fbxl19
Domain Architecture	No domain graphic available
Description	F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat protein 19).

HMBX1_MOUSE
θ value	2.36792 (rank : 73)	NC score	0.080091 (rank : 77)
Query Neighborhood Hits	109	Target Neighborhood Hits	117	Shared Neighborhood Hits	25
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

LASS2_HUMAN
θ value	2.36792 (rank : 74)	NC score	0.032995 (rank : 220)
Query Neighborhood Hits	109	Target Neighborhood Hits	47	Shared Neighborhood Hits	18
SwissProt Accessions	Q96G23, Q9HD96, Q9NW79	Gene names	LASS2, TMSG1
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 2 (Tumor metastasis-suppressor gene 1 protein) (SP260).

LASS2_MOUSE
θ value	2.36792 (rank : 75)	NC score	0.031091 (rank : 221)
Query Neighborhood Hits	109	Target Neighborhood Hits	51	Shared Neighborhood Hits	18
SwissProt Accessions	Q924Z4, Q3TXC5, Q9DCN6	Gene names	Lass2, Trh3
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 2 (Translocating chain-associating membrane protein homolog 3) (TRAM homolog 3).

PO6F2_HUMAN
θ value	2.36792 (rank : 76)	NC score	0.077221 (rank : 79)
Query Neighborhood Hits	109	Target Neighborhood Hits	618	Shared Neighborhood Hits	55
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

PO6F2_MOUSE
θ value	2.36792 (rank : 77)	NC score	0.079955 (rank : 78)
Query Neighborhood Hits	109	Target Neighborhood Hits	639	Shared Neighborhood Hits	57
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

SETX_HUMAN
θ value	2.36792 (rank : 78)	NC score	0.016399 (rank : 236)
Query Neighborhood Hits	109	Target Neighborhood Hits	368	Shared Neighborhood Hits	5
SwissProt Accessions	Q7Z333, O75120, Q3KQX4, Q68DW5, Q6AZD7, Q7Z3J6, Q8WX33, Q9H9D1, Q9NVP9	Gene names	SETX, ALS4, KIAA0625, SCAR1
Domain Architecture
Description	Probable helicase senataxin (EC 3.6.1.-) (SEN1 homolog).

FXL19_HUMAN
θ value	3.0926 (rank : 79)	NC score	0.019782 (rank : 233)
Query Neighborhood Hits	109	Target Neighborhood Hits	147	Shared Neighborhood Hits	5
SwissProt Accessions	Q6PCT2, Q8N789, Q9NT14	Gene names	FBXL19, FBL19
Domain Architecture	No domain graphic available
Description	F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat protein 19).

GAK11_HUMAN
θ value	3.0926 (rank : 80)	NC score	0.028507 (rank : 227)
Query Neighborhood Hits	109	Target Neighborhood Hits	409	Shared Neighborhood Hits	14
SwissProt Accessions	P63145, Q9UKI1	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_22q11.21 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K101 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK12_HUMAN
θ value	3.0926 (rank : 81)	NC score	0.028891 (rank : 223)
Query Neighborhood Hits	109	Target Neighborhood Hits	374	Shared Neighborhood Hits	15
SwissProt Accessions	P63130, Q9UKI0	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_1q22 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K102 Gag protein) (HERV-K(III) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK1_HUMAN
θ value	3.0926 (rank : 82)	NC score	0.028617 (rank : 224)
Query Neighborhood Hits	109	Target Neighborhood Hits	268	Shared Neighborhood Hits	10
SwissProt Accessions	P62683	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_12q14.1 provirus ancestral Gag polyprotein (Gag polyprotein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK2_HUMAN
θ value	3.0926 (rank : 83)	NC score	0.028551 (rank : 225)
Query Neighborhood Hits	109	Target Neighborhood Hits	406	Shared Neighborhood Hits	14
SwissProt Accessions	Q7LDI9, Q9UKH5, Q9Y6I1, Q9YNA6, Q9YNB0	Gene names	ERVK6
Domain Architecture	No domain graphic available
Description	HERV-K_7p22.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(HML-2.HOM) Gag protein) (HERV-K108 Gag protein) (HERV-K(C7) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK4_HUMAN
θ value	3.0926 (rank : 84)	NC score	0.028526 (rank : 226)
Query Neighborhood Hits	109	Target Neighborhood Hits	415	Shared Neighborhood Hits	14
SwissProt Accessions	P63126, Q9UKH4	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_6q14.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K109 Gag protein) (HERV-K(C6) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK5_HUMAN
θ value	3.0926 (rank : 85)	NC score	0.029147 (rank : 222)
Query Neighborhood Hits	109	Target Neighborhood Hits	429	Shared Neighborhood Hits	16
SwissProt Accessions	P62684	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_19p13.11 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K113 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

HXC11_HUMAN
θ value	3.0926 (rank : 86)	NC score	0.073456 (rank : 81)
Query Neighborhood Hits	109	Target Neighborhood Hits	349	Shared Neighborhood Hits	48
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

BCOR_HUMAN
θ value	4.03905 (rank : 87)	NC score	0.006823 (rank : 244)
Query Neighborhood Hits	109	Target Neighborhood Hits	609	Shared Neighborhood Hits	10
SwissProt Accessions	Q6W2J9, Q6P4B6, Q7Z2K7, Q8TEB4, Q96DB3, Q9H232, Q9H233, Q9HCJ7, Q9NXF2	Gene names	BCOR, KIAA1575
Domain Architecture	No domain graphic available
Description	BCoR protein (BCL-6 corepressor).

PHF8_HUMAN
θ value	4.03905 (rank : 88)	NC score	0.009022 (rank : 243)
Query Neighborhood Hits	109	Target Neighborhood Hits	105	Shared Neighborhood Hits	4
SwissProt Accessions	Q9UPP1, Q5H9U5, Q5VUJ4, Q7Z6D4, Q9HAH2	Gene names	PHF8, KIAA1111, ZNF422
Domain Architecture	No domain graphic available
Description	PHD finger protein 8.

SRBP1_MOUSE
θ value	4.03905 (rank : 89)	NC score	0.015069 (rank : 237)
Query Neighborhood Hits	109	Target Neighborhood Hits	384	Shared Neighborhood Hits	10
SwissProt Accessions	Q9WTN3	Gene names	Srebf1, Srebp1
Domain Architecture
Description	Sterol regulatory element-binding protein 1 (SREBP-1) (Sterol regulatory element-binding transcription factor 1).

TMEM5_HUMAN
θ value	4.03905 (rank : 90)	NC score	0.022655 (rank : 230)
Query Neighborhood Hits	109	Target Neighborhood Hits	8	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y2B1, Q6PKD6	Gene names	TMEM5
Domain Architecture	No domain graphic available
Description	Transmembrane protein 5.

HXD11_MOUSE
θ value	5.27518 (rank : 91)	NC score	0.076595 (rank : 80)
Query Neighborhood Hits	109	Target Neighborhood Hits	376	Shared Neighborhood Hits	54
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

SNPC4_MOUSE
θ value	5.27518 (rank : 92)	NC score	0.014479 (rank : 239)
Query Neighborhood Hits	109	Target Neighborhood Hits	237	Shared Neighborhood Hits	8
SwissProt Accessions	Q8BP86, Q6PGG7, Q80UG9, Q810L1	Gene names	Snapc4
Domain Architecture	No domain graphic available
Description	snRNA-activating protein complex subunit 4 (SNAPc subunit 4) (snRNA- activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit).

ANR25_MOUSE
θ value	6.88961 (rank : 93)	NC score	0.004460 (rank : 247)
Query Neighborhood Hits	109	Target Neighborhood Hits	398	Shared Neighborhood Hits	7
SwissProt Accessions	Q8BX02, Q8BLD5, Q91Z35	Gene names	Ankrd25
Domain Architecture	No domain graphic available
Description	Ankyrin repeat domain-containing protein 25.

KCNH2_HUMAN
θ value	6.88961 (rank : 94)	NC score	0.004251 (rank : 248)
Query Neighborhood Hits	109	Target Neighborhood Hits	158	Shared Neighborhood Hits	3
SwissProt Accessions	Q12809, O75418, O75680, Q9BT72, Q9BUT7, Q9H3P0	Gene names	KCNH2, ERG, ERG1, HERG, HERG1
Domain Architecture
Description	Potassium voltage-gated channel subfamily H member 2 (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (H-ERG) (Erg1) (Ether-a-go-go-related protein 1) (Eag-related protein 1) (eag homolog).

PRG4_MOUSE
θ value	6.88961 (rank : 95)	NC score	0.009844 (rank : 242)
Query Neighborhood Hits	109	Target Neighborhood Hits	624	Shared Neighborhood Hits	12
SwissProt Accessions	Q9JM99, Q3UEL1, Q3V198	Gene names	Prg4, Msf, Szp
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

ALEX_HUMAN
θ value	8.99809 (rank : 96)	NC score	0.014628 (rank : 238)
Query Neighborhood Hits	109	Target Neighborhood Hits	361	Shared Neighborhood Hits	17
SwissProt Accessions	P84996	Gene names	GNAS, GNAS1
Domain Architecture	No domain graphic available
Description	Protein ALEX (Alternative gene product encoded by XL-exon).

AUTS2_HUMAN
θ value	8.99809 (rank : 97)	NC score	0.025701 (rank : 229)
Query Neighborhood Hits	109	Target Neighborhood Hits	342	Shared Neighborhood Hits	16
SwissProt Accessions	Q8WXX7, Q9Y4F2	Gene names	AUTS2, KIAA0442
Domain Architecture	No domain graphic available
Description	Autism susceptibility gene 2 protein.

CUTL1_MOUSE
θ value	8.99809 (rank : 98)	NC score	0.065351 (rank : 114)
Query Neighborhood Hits	109	Target Neighborhood Hits	1620	Shared Neighborhood Hits	61
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

GAK6_HUMAN
θ value	8.99809 (rank : 99)	NC score	0.027135 (rank : 228)
Query Neighborhood Hits	109	Target Neighborhood Hits	392	Shared Neighborhood Hits	16
SwissProt Accessions	P62685	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_8p23.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K115 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

IL3B2_MOUSE
θ value	8.99809 (rank : 100)	NC score	0.010359 (rank : 241)
Query Neighborhood Hits	109	Target Neighborhood Hits	372	Shared Neighborhood Hits	10
SwissProt Accessions	P26954	Gene names	Csf2rb2, Ai2ca, Il3r, Il3rb2
Domain Architecture
Description	Interleukin-3 receptor class 2 beta chain precursor (Interleukin-3 receptor class II beta chain) (Colony-stimulating factor 2 receptor, beta 2 chain).

IRF7_MOUSE
θ value	8.99809 (rank : 101)	NC score	0.006768 (rank : 245)
Query Neighborhood Hits	109	Target Neighborhood Hits	34	Shared Neighborhood Hits	4
SwissProt Accessions	P70434	Gene names	Irf7
Domain Architecture
Description	Interferon regulatory factor 7 (IRF-7).

IRS1_HUMAN
θ value	8.99809 (rank : 102)	NC score	0.006765 (rank : 246)
Query Neighborhood Hits	109	Target Neighborhood Hits	109	Shared Neighborhood Hits	2
SwissProt Accessions	P35568	Gene names	IRS1
Domain Architecture
Description	Insulin receptor substrate 1 (IRS-1).

NKX31_MOUSE
θ value	8.99809 (rank : 103)	NC score	0.042002 (rank : 218)
Query Neighborhood Hits	109	Target Neighborhood Hits	379	Shared Neighborhood Hits	43
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

PAX3_HUMAN
θ value	8.99809 (rank : 104)	NC score	0.059076 (rank : 156)
Query Neighborhood Hits	109	Target Neighborhood Hits	513	Shared Neighborhood Hits	58
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

PAX3_MOUSE
θ value	8.99809 (rank : 105)	NC score	0.057784 (rank : 164)
Query Neighborhood Hits	109	Target Neighborhood Hits	478	Shared Neighborhood Hits	57
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

PAX7_HUMAN
θ value	8.99809 (rank : 106)	NC score	0.063518 (rank : 128)
Query Neighborhood Hits	109	Target Neighborhood Hits	456	Shared Neighborhood Hits	69
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

PAX7_MOUSE
θ value	8.99809 (rank : 107)	NC score	0.062727 (rank : 137)
Query Neighborhood Hits	109	Target Neighborhood Hits	422	Shared Neighborhood Hits	68
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

PRG4_HUMAN
θ value	8.99809 (rank : 108)	NC score	0.017291 (rank : 235)
Query Neighborhood Hits	109	Target Neighborhood Hits	764	Shared Neighborhood Hits	23
SwissProt Accessions	Q92954, Q6DNC4, Q6DNC5, Q6ZMZ5, Q9BX49	Gene names	PRG4, MSF, SZP
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

TIM44_MOUSE
θ value	8.99809 (rank : 109)	NC score	0.010886 (rank : 240)
Query Neighborhood Hits	109	Target Neighborhood Hits	235	Shared Neighborhood Hits	3
SwissProt Accessions	O35857	Gene names	Timm44, Mimt44, Tim44
Domain Architecture
Description	Import inner membrane translocase subunit TIM44, mitochondrial precursor.

ALX3_HUMAN
θ value	θ > 10 (rank : 110)	NC score	0.070003 (rank : 93)
Query Neighborhood Hits	109	Target Neighborhood Hits	380	Shared Neighborhood Hits	62
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX3_MOUSE
θ value	θ > 10 (rank : 111)	NC score	0.069978 (rank : 94)
Query Neighborhood Hits	109	Target Neighborhood Hits	386	Shared Neighborhood Hits	61
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX4_HUMAN
θ value	θ > 10 (rank : 112)	NC score	0.061307 (rank : 145)
Query Neighborhood Hits	109	Target Neighborhood Hits	394	Shared Neighborhood Hits	68
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

ALX4_MOUSE
θ value	θ > 10 (rank : 113)	NC score	0.064151 (rank : 123)
Query Neighborhood Hits	109	Target Neighborhood Hits	369	Shared Neighborhood Hits	65
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

BARX2_HUMAN
θ value	θ > 10 (rank : 114)	NC score	0.059349 (rank : 154)
Query Neighborhood Hits	109	Target Neighborhood Hits	387	Shared Neighborhood Hits	53
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

BARX2_MOUSE
θ value	θ > 10 (rank : 115)	NC score	0.056167 (rank : 173)
Query Neighborhood Hits	109	Target Neighborhood Hits	335	Shared Neighborhood Hits	52
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

BSH_MOUSE
θ value	θ > 10 (rank : 116)	NC score	0.083023 (rank : 70)
Query Neighborhood Hits	109	Target Neighborhood Hits	349	Shared Neighborhood Hits	60
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

CDX1_MOUSE
θ value	θ > 10 (rank : 117)	NC score	0.050891 (rank : 206)
Query Neighborhood Hits	109	Target Neighborhood Hits	379	Shared Neighborhood Hits	45
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

CDX4_HUMAN
θ value	θ > 10 (rank : 118)	NC score	0.050743 (rank : 209)
Query Neighborhood Hits	109	Target Neighborhood Hits	366	Shared Neighborhood Hits	55
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CDX4_MOUSE
θ value	θ > 10 (rank : 119)	NC score	0.051749 (rank : 199)
Query Neighborhood Hits	109	Target Neighborhood Hits	378	Shared Neighborhood Hits	57
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

CUTL1_HUMAN
θ value	θ > 10 (rank : 120)	NC score	0.062245 (rank : 142)
Query Neighborhood Hits	109	Target Neighborhood Hits	1574	Shared Neighborhood Hits	57
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

DBX1_MOUSE
θ value	θ > 10 (rank : 121)	NC score	0.051743 (rank : 200)
Query Neighborhood Hits	109	Target Neighborhood Hits	346	Shared Neighborhood Hits	48
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

DLX1_HUMAN
θ value	θ > 10 (rank : 122)	NC score	0.067998 (rank : 105)
Query Neighborhood Hits	109	Target Neighborhood Hits	343	Shared Neighborhood Hits	61
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_MOUSE
θ value	θ > 10 (rank : 123)	NC score	0.068050 (rank : 104)
Query Neighborhood Hits	109	Target Neighborhood Hits	343	Shared Neighborhood Hits	61
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX2_HUMAN
θ value	θ > 10 (rank : 124)	NC score	0.057333 (rank : 165)
Query Neighborhood Hits	109	Target Neighborhood Hits	355	Shared Neighborhood Hits	57
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

DLX2_MOUSE
θ value	θ > 10 (rank : 125)	NC score	0.057218 (rank : 166)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	56
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

DLX3_HUMAN
θ value	θ > 10 (rank : 126)	NC score	0.066205 (rank : 111)
Query Neighborhood Hits	109	Target Neighborhood Hits	369	Shared Neighborhood Hits	58
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX3_MOUSE
θ value	θ > 10 (rank : 127)	NC score	0.063119 (rank : 133)
Query Neighborhood Hits	109	Target Neighborhood Hits	367	Shared Neighborhood Hits	58
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX4_HUMAN
θ value	θ > 10 (rank : 128)	NC score	0.059357 (rank : 153)
Query Neighborhood Hits	109	Target Neighborhood Hits	350	Shared Neighborhood Hits	55
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

DLX4_MOUSE
θ value	θ > 10 (rank : 129)	NC score	0.063117 (rank : 134)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	55
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

DLX5_HUMAN
θ value	θ > 10 (rank : 130)	NC score	0.063853 (rank : 125)
Query Neighborhood Hits	109	Target Neighborhood Hits	405	Shared Neighborhood Hits	61
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX5_MOUSE
θ value	θ > 10 (rank : 131)	NC score	0.068770 (rank : 101)
Query Neighborhood Hits	109	Target Neighborhood Hits	434	Shared Neighborhood Hits	62
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

DLX6_HUMAN
θ value	θ > 10 (rank : 132)	NC score	0.072775 (rank : 83)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	65
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

DUX1_HUMAN
θ value	θ > 10 (rank : 133)	NC score	0.062590 (rank : 139)
Query Neighborhood Hits	109	Target Neighborhood Hits	330	Shared Neighborhood Hits	49
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX3_HUMAN
θ value	θ > 10 (rank : 134)	NC score	0.056194 (rank : 172)
Query Neighborhood Hits	109	Target Neighborhood Hits	312	Shared Neighborhood Hits	49
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

DUX4_HUMAN
θ value	θ > 10 (rank : 135)	NC score	0.064258 (rank : 121)
Query Neighborhood Hits	109	Target Neighborhood Hits	403	Shared Neighborhood Hits	49
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

DUX5_HUMAN
θ value	θ > 10 (rank : 136)	NC score	0.062332 (rank : 140)
Query Neighborhood Hits	109	Target Neighborhood Hits	330	Shared Neighborhood Hits	49
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

EMX1_HUMAN
θ value	θ > 10 (rank : 137)	NC score	0.053205 (rank : 190)
Query Neighborhood Hits	109	Target Neighborhood Hits	336	Shared Neighborhood Hits	57
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

EMX2_HUMAN
θ value	θ > 10 (rank : 138)	NC score	0.067114 (rank : 107)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	59
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_MOUSE
θ value	θ > 10 (rank : 139)	NC score	0.067563 (rank : 106)
Query Neighborhood Hits	109	Target Neighborhood Hits	340	Shared Neighborhood Hits	59
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

GSC_HUMAN
θ value	θ > 10 (rank : 140)	NC score	0.063076 (rank : 135)
Query Neighborhood Hits	109	Target Neighborhood Hits	369	Shared Neighborhood Hits	60
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

GSC_MOUSE
θ value	θ > 10 (rank : 141)	NC score	0.061843 (rank : 143)
Query Neighborhood Hits	109	Target Neighborhood Hits	368	Shared Neighborhood Hits	57
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

GSH2_HUMAN
θ value	θ > 10 (rank : 142)	NC score	0.055337 (rank : 179)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	50
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

GSH2_MOUSE
θ value	θ > 10 (rank : 143)	NC score	0.056579 (rank : 169)
Query Neighborhood Hits	109	Target Neighborhood Hits	319	Shared Neighborhood Hits	50
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HESX1_MOUSE
θ value	θ > 10 (rank : 144)	NC score	0.054462 (rank : 183)
Query Neighborhood Hits	109	Target Neighborhood Hits	331	Shared Neighborhood Hits	46
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

HHEX_HUMAN
θ value	θ > 10 (rank : 145)	NC score	0.052456 (rank : 193)
Query Neighborhood Hits	109	Target Neighborhood Hits	358	Shared Neighborhood Hits	46
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

HLX1_HUMAN
θ value	θ > 10 (rank : 146)	NC score	0.064537 (rank : 119)
Query Neighborhood Hits	109	Target Neighborhood Hits	370	Shared Neighborhood Hits	57
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

HLX1_MOUSE
θ value	θ > 10 (rank : 147)	NC score	0.059030 (rank : 157)
Query Neighborhood Hits	109	Target Neighborhood Hits	362	Shared Neighborhood Hits	55
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

HLXB9_HUMAN
θ value	θ > 10 (rank : 148)	NC score	0.054716 (rank : 181)
Query Neighborhood Hits	109	Target Neighborhood Hits	336	Shared Neighborhood Hits	54
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

HLXB9_MOUSE
θ value	θ > 10 (rank : 149)	NC score	0.052124 (rank : 195)
Query Neighborhood Hits	109	Target Neighborhood Hits	354	Shared Neighborhood Hits	57
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

HME1_HUMAN
θ value	θ > 10 (rank : 150)	NC score	0.056128 (rank : 174)
Query Neighborhood Hits	109	Target Neighborhood Hits	384	Shared Neighborhood Hits	52
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HME1_MOUSE
θ value	θ > 10 (rank : 151)	NC score	0.056015 (rank : 175)
Query Neighborhood Hits	109	Target Neighborhood Hits	397	Shared Neighborhood Hits	53
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

HME2_HUMAN
θ value	θ > 10 (rank : 152)	NC score	0.062640 (rank : 138)
Query Neighborhood Hits	109	Target Neighborhood Hits	355	Shared Neighborhood Hits	59
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

HME2_MOUSE
θ value	θ > 10 (rank : 153)	NC score	0.062332 (rank : 141)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	59
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

HMX2_MOUSE
θ value	θ > 10 (rank : 154)	NC score	0.051883 (rank : 197)
Query Neighborhood Hits	109	Target Neighborhood Hits	354	Shared Neighborhood Hits	55
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

HXA11_HUMAN
θ value	θ > 10 (rank : 155)	NC score	0.056465 (rank : 170)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	39
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

HXA11_MOUSE
θ value	θ > 10 (rank : 156)	NC score	0.057826 (rank : 163)
Query Neighborhood Hits	109	Target Neighborhood Hits	327	Shared Neighborhood Hits	39
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

HXA13_HUMAN
θ value	θ > 10 (rank : 157)	NC score	0.066106 (rank : 112)
Query Neighborhood Hits	109	Target Neighborhood Hits	353	Shared Neighborhood Hits	59
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

HXA13_MOUSE
θ value	θ > 10 (rank : 158)	NC score	0.066880 (rank : 108)
Query Neighborhood Hits	109	Target Neighborhood Hits	351	Shared Neighborhood Hits	59
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

HXA1_HUMAN
θ value	θ > 10 (rank : 159)	NC score	0.069523 (rank : 95)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	51
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXA1_MOUSE
θ value	θ > 10 (rank : 160)	NC score	0.070270 (rank : 92)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	53
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

HXA3_HUMAN
θ value	θ > 10 (rank : 161)	NC score	0.052878 (rank : 192)
Query Neighborhood Hits	109	Target Neighborhood Hits	535	Shared Neighborhood Hits	64
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HXA3_MOUSE
θ value	θ > 10 (rank : 162)	NC score	0.053857 (rank : 187)
Query Neighborhood Hits	109	Target Neighborhood Hits	558	Shared Neighborhood Hits	65
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

HXA6_HUMAN
θ value	θ > 10 (rank : 163)	NC score	0.069328 (rank : 98)
Query Neighborhood Hits	109	Target Neighborhood Hits	309	Shared Neighborhood Hits	50
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

HXA6_MOUSE
θ value	θ > 10 (rank : 164)	NC score	0.066676 (rank : 110)
Query Neighborhood Hits	109	Target Neighborhood Hits	304	Shared Neighborhood Hits	48
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

HXA7_HUMAN
θ value	θ > 10 (rank : 165)	NC score	0.063668 (rank : 127)
Query Neighborhood Hits	109	Target Neighborhood Hits	309	Shared Neighborhood Hits	46
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

HXA7_MOUSE
θ value	θ > 10 (rank : 166)	NC score	0.073379 (rank : 82)
Query Neighborhood Hits	109	Target Neighborhood Hits	318	Shared Neighborhood Hits	48
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

HXA9_HUMAN
θ value	θ > 10 (rank : 167)	NC score	0.070305 (rank : 91)
Query Neighborhood Hits	109	Target Neighborhood Hits	332	Shared Neighborhood Hits	57
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA9_MOUSE
θ value	θ > 10 (rank : 168)	NC score	0.070461 (rank : 90)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	57
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXB13_HUMAN
θ value	θ > 10 (rank : 169)	NC score	0.070895 (rank : 88)
Query Neighborhood Hits	109	Target Neighborhood Hits	377	Shared Neighborhood Hits	57
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXB13_MOUSE
θ value	θ > 10 (rank : 170)	NC score	0.064405 (rank : 120)
Query Neighborhood Hits	109	Target Neighborhood Hits	384	Shared Neighborhood Hits	56
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

HXB1_HUMAN
θ value	θ > 10 (rank : 171)	NC score	0.059934 (rank : 149)
Query Neighborhood Hits	109	Target Neighborhood Hits	356	Shared Neighborhood Hits	53
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

HXB1_MOUSE
θ value	θ > 10 (rank : 172)	NC score	0.060176 (rank : 148)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	55
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

HXB4_HUMAN
θ value	θ > 10 (rank : 173)	NC score	0.051600 (rank : 202)
Query Neighborhood Hits	109	Target Neighborhood Hits	376	Shared Neighborhood Hits	50
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXB4_MOUSE
θ value	θ > 10 (rank : 174)	NC score	0.050072 (rank : 217)
Query Neighborhood Hits	109	Target Neighborhood Hits	375	Shared Neighborhood Hits	49
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

HXB6_HUMAN
θ value	θ > 10 (rank : 175)	NC score	0.064241 (rank : 122)
Query Neighborhood Hits	109	Target Neighborhood Hits	307	Shared Neighborhood Hits	47
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

HXB6_MOUSE
θ value	θ > 10 (rank : 176)	NC score	0.063966 (rank : 124)
Query Neighborhood Hits	109	Target Neighborhood Hits	309	Shared Neighborhood Hits	47
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

HXB7_HUMAN
θ value	θ > 10 (rank : 177)	NC score	0.068501 (rank : 103)
Query Neighborhood Hits	109	Target Neighborhood Hits	311	Shared Neighborhood Hits	47
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

HXB7_MOUSE
θ value	θ > 10 (rank : 178)	NC score	0.071115 (rank : 87)
Query Neighborhood Hits	109	Target Neighborhood Hits	314	Shared Neighborhood Hits	47
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXB8_HUMAN
θ value	θ > 10 (rank : 179)	NC score	0.081871 (rank : 71)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	48
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

HXB8_MOUSE
θ value	θ > 10 (rank : 180)	NC score	0.081371 (rank : 75)
Query Neighborhood Hits	109	Target Neighborhood Hits	325	Shared Neighborhood Hits	49
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

HXB9_HUMAN
θ value	θ > 10 (rank : 181)	NC score	0.061296 (rank : 146)
Query Neighborhood Hits	109	Target Neighborhood Hits	344	Shared Neighborhood Hits	48
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

HXB9_MOUSE
θ value	θ > 10 (rank : 182)	NC score	0.062795 (rank : 136)
Query Neighborhood Hits	109	Target Neighborhood Hits	344	Shared Neighborhood Hits	48
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

HXC13_HUMAN
θ value	θ > 10 (rank : 183)	NC score	0.057941 (rank : 161)
Query Neighborhood Hits	109	Target Neighborhood Hits	336	Shared Neighborhood Hits	56
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
θ value	θ > 10 (rank : 184)	NC score	0.057882 (rank : 162)
Query Neighborhood Hits	109	Target Neighborhood Hits	337	Shared Neighborhood Hits	55
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

HXC4_HUMAN
θ value	θ > 10 (rank : 185)	NC score	0.050662 (rank : 210)
Query Neighborhood Hits	109	Target Neighborhood Hits	361	Shared Neighborhood Hits	51
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

HXC4_MOUSE
θ value	θ > 10 (rank : 186)	NC score	0.051581 (rank : 203)
Query Neighborhood Hits	109	Target Neighborhood Hits	365	Shared Neighborhood Hits	50
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

HXC6_HUMAN
θ value	θ > 10 (rank : 187)	NC score	0.056683 (rank : 167)
Query Neighborhood Hits	109	Target Neighborhood Hits	306	Shared Neighborhood Hits	48
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
θ value	θ > 10 (rank : 188)	NC score	0.056683 (rank : 168)
Query Neighborhood Hits	109	Target Neighborhood Hits	306	Shared Neighborhood Hits	48
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

HXC8_HUMAN
θ value	θ > 10 (rank : 189)	NC score	0.081454 (rank : 73)
Query Neighborhood Hits	109	Target Neighborhood Hits	327	Shared Neighborhood Hits	53
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXC8_MOUSE
θ value	θ > 10 (rank : 190)	NC score	0.081467 (rank : 72)
Query Neighborhood Hits	109	Target Neighborhood Hits	327	Shared Neighborhood Hits	53
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC9_HUMAN
θ value	θ > 10 (rank : 191)	NC score	0.069411 (rank : 97)
Query Neighborhood Hits	109	Target Neighborhood Hits	339	Shared Neighborhood Hits	53
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXC9_MOUSE
θ value	θ > 10 (rank : 192)	NC score	0.069423 (rank : 96)
Query Neighborhood Hits	109	Target Neighborhood Hits	338	Shared Neighborhood Hits	53
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXD12_HUMAN
θ value	θ > 10 (rank : 193)	NC score	0.051113 (rank : 205)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	41
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

HXD13_HUMAN
θ value	θ > 10 (rank : 194)	NC score	0.063253 (rank : 130)
Query Neighborhood Hits	109	Target Neighborhood Hits	332	Shared Neighborhood Hits	55
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
θ value	θ > 10 (rank : 195)	NC score	0.063238 (rank : 131)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	55
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

HXD1_HUMAN
θ value	θ > 10 (rank : 196)	NC score	0.061412 (rank : 144)
Query Neighborhood Hits	109	Target Neighborhood Hits	337	Shared Neighborhood Hits	53
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

HXD1_MOUSE
θ value	θ > 10 (rank : 197)	NC score	0.063687 (rank : 126)
Query Neighborhood Hits	109	Target Neighborhood Hits	381	Shared Neighborhood Hits	54
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

HXD3_HUMAN
θ value	θ > 10 (rank : 198)	NC score	0.051769 (rank : 198)
Query Neighborhood Hits	109	Target Neighborhood Hits	433	Shared Neighborhood Hits	53
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

HXD3_MOUSE
θ value	θ > 10 (rank : 199)	NC score	0.055867 (rank : 177)
Query Neighborhood Hits	109	Target Neighborhood Hits	435	Shared Neighborhood Hits	55
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

HXD8_HUMAN
θ value	θ > 10 (rank : 200)	NC score	0.080440 (rank : 76)
Query Neighborhood Hits	109	Target Neighborhood Hits	338	Shared Neighborhood Hits	49
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HXD8_MOUSE
θ value	θ > 10 (rank : 201)	NC score	0.081404 (rank : 74)
Query Neighborhood Hits	109	Target Neighborhood Hits	333	Shared Neighborhood Hits	50
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXD9_HUMAN
θ value	θ > 10 (rank : 202)	NC score	0.065315 (rank : 115)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	53
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXD9_MOUSE
θ value	θ > 10 (rank : 203)	NC score	0.065023 (rank : 116)
Query Neighborhood Hits	109	Target Neighborhood Hits	359	Shared Neighborhood Hits	53
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

IPF1_HUMAN
θ value	θ > 10 (rank : 204)	NC score	0.053894 (rank : 186)
Query Neighborhood Hits	109	Target Neighborhood Hits	330	Shared Neighborhood Hits	49
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

IPF1_MOUSE
θ value	θ > 10 (rank : 205)	NC score	0.054996 (rank : 180)
Query Neighborhood Hits	109	Target Neighborhood Hits	340	Shared Neighborhood Hits	50
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

LHX2_HUMAN
θ value	θ > 10 (rank : 206)	NC score	0.058039 (rank : 160)
Query Neighborhood Hits	109	Target Neighborhood Hits	432	Shared Neighborhood Hits	57
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

LHX2_MOUSE
θ value	θ > 10 (rank : 207)	NC score	0.058700 (rank : 158)
Query Neighborhood Hits	109	Target Neighborhood Hits	431	Shared Neighborhood Hits	56
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

LHX4_MOUSE
θ value	θ > 10 (rank : 208)	NC score	0.050187 (rank : 215)
Query Neighborhood Hits	109	Target Neighborhood Hits	457	Shared Neighborhood Hits	62
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

LHX9_HUMAN
θ value	θ > 10 (rank : 209)	NC score	0.056195 (rank : 171)
Query Neighborhood Hits	109	Target Neighborhood Hits	444	Shared Neighborhood Hits	54
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

LHX9_MOUSE
θ value	θ > 10 (rank : 210)	NC score	0.054670 (rank : 182)
Query Neighborhood Hits	109	Target Neighborhood Hits	445	Shared Neighborhood Hits	54
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

MSX2_HUMAN
θ value	θ > 10 (rank : 211)	NC score	0.051917 (rank : 196)
Query Neighborhood Hits	109	Target Neighborhood Hits	337	Shared Neighborhood Hits	53
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

MSX2_MOUSE
θ value	θ > 10 (rank : 212)	NC score	0.050261 (rank : 212)
Query Neighborhood Hits	109	Target Neighborhood Hits	345	Shared Neighborhood Hits	53
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

NKX12_MOUSE
θ value	θ > 10 (rank : 213)	NC score	0.055352 (rank : 178)
Query Neighborhood Hits	109	Target Neighborhood Hits	332	Shared Neighborhood Hits	45
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

NKX24_HUMAN
θ value	θ > 10 (rank : 214)	NC score	0.058586 (rank : 159)
Query Neighborhood Hits	109	Target Neighborhood Hits	366	Shared Neighborhood Hits	51
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX24_MOUSE
θ value	θ > 10 (rank : 215)	NC score	0.050805 (rank : 208)
Query Neighborhood Hits	109	Target Neighborhood Hits	356	Shared Neighborhood Hits	48
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

NKX25_HUMAN
θ value	θ > 10 (rank : 216)	NC score	0.053781 (rank : 188)
Query Neighborhood Hits	109	Target Neighborhood Hits	338	Shared Neighborhood Hits	56
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

NKX28_HUMAN
θ value	θ > 10 (rank : 217)	NC score	0.066860 (rank : 109)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	66
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

NKX28_MOUSE
θ value	θ > 10 (rank : 218)	NC score	0.069110 (rank : 99)
Query Neighborhood Hits	109	Target Neighborhood Hits	347	Shared Neighborhood Hits	64
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

NKX61_HUMAN
θ value	θ > 10 (rank : 219)	NC score	0.068683 (rank : 102)
Query Neighborhood Hits	109	Target Neighborhood Hits	431	Shared Neighborhood Hits	59
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

NKX61_MOUSE
θ value	θ > 10 (rank : 220)	NC score	0.072151 (rank : 84)
Query Neighborhood Hits	109	Target Neighborhood Hits	439	Shared Neighborhood Hits	59
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

OTP_MOUSE
θ value	θ > 10 (rank : 221)	NC score	0.063418 (rank : 129)
Query Neighborhood Hits	109	Target Neighborhood Hits	387	Shared Neighborhood Hits	57
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

PAX4_HUMAN
θ value	θ > 10 (rank : 222)	NC score	0.053910 (rank : 185)
Query Neighborhood Hits	109	Target Neighborhood Hits	367	Shared Neighborhood Hits	56
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

PAX4_MOUSE
θ value	θ > 10 (rank : 223)	NC score	0.051115 (rank : 204)
Query Neighborhood Hits	109	Target Neighborhood Hits	370	Shared Neighborhood Hits	54
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

PEPP1_HUMAN
θ value	θ > 10 (rank : 224)	NC score	0.052209 (rank : 194)
Query Neighborhood Hits	109	Target Neighborhood Hits	338	Shared Neighborhood Hits	47
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

PHX2B_HUMAN
θ value	θ > 10 (rank : 225)	NC score	0.050260 (rank : 213)
Query Neighborhood Hits	109	Target Neighborhood Hits	407	Shared Neighborhood Hits	52
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
θ value	θ > 10 (rank : 226)	NC score	0.050260 (rank : 214)
Query Neighborhood Hits	109	Target Neighborhood Hits	407	Shared Neighborhood Hits	52
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PITX1_HUMAN
θ value	θ > 10 (rank : 227)	NC score	0.066039 (rank : 113)
Query Neighborhood Hits	109	Target Neighborhood Hits	353	Shared Neighborhood Hits	57
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

PITX1_MOUSE
θ value	θ > 10 (rank : 228)	NC score	0.070572 (rank : 89)
Query Neighborhood Hits	109	Target Neighborhood Hits	362	Shared Neighborhood Hits	61
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

PITX2_HUMAN
θ value	θ > 10 (rank : 229)	NC score	0.083578 (rank : 68)
Query Neighborhood Hits	109	Target Neighborhood Hits	381	Shared Neighborhood Hits	65
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
θ value	θ > 10 (rank : 230)	NC score	0.083259 (rank : 69)
Query Neighborhood Hits	109	Target Neighborhood Hits	383	Shared Neighborhood Hits	65
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

PITX3_HUMAN
θ value	θ > 10 (rank : 231)	NC score	0.085064 (rank : 67)
Query Neighborhood Hits	109	Target Neighborhood Hits	366	Shared Neighborhood Hits	66
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_MOUSE
θ value	θ > 10 (rank : 232)	NC score	0.085785 (rank : 66)
Query Neighborhood Hits	109	Target Neighborhood Hits	380	Shared Neighborhood Hits	67
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PO6F1_HUMAN
θ value	θ > 10 (rank : 233)	NC score	0.064623 (rank : 118)
Query Neighborhood Hits	109	Target Neighborhood Hits	370	Shared Neighborhood Hits	52
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

PO6F1_MOUSE
θ value	θ > 10 (rank : 234)	NC score	0.063184 (rank : 132)
Query Neighborhood Hits	109	Target Neighborhood Hits	581	Shared Neighborhood Hits	57
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

PROP1_HUMAN
θ value	θ > 10 (rank : 235)	NC score	0.059890 (rank : 150)
Query Neighborhood Hits	109	Target Neighborhood Hits	354	Shared Neighborhood Hits	61
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PROP1_MOUSE
θ value	θ > 10 (rank : 236)	NC score	0.059156 (rank : 155)
Query Neighborhood Hits	109	Target Neighborhood Hits	361	Shared Neighborhood Hits	65
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PRRX1_HUMAN
θ value	θ > 10 (rank : 237)	NC score	0.051613 (rank : 201)
Query Neighborhood Hits	109	Target Neighborhood Hits	347	Shared Neighborhood Hits	55
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

PRRX1_MOUSE
θ value	θ > 10 (rank : 238)	NC score	0.050371 (rank : 211)
Query Neighborhood Hits	109	Target Neighborhood Hits	346	Shared Neighborhood Hits	53
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

PRRX2_MOUSE
θ value	θ > 10 (rank : 239)	NC score	0.050154 (rank : 216)
Query Neighborhood Hits	109	Target Neighborhood Hits	351	Shared Neighborhood Hits	53
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

PRRXL_MOUSE
θ value	θ > 10 (rank : 240)	NC score	0.059436 (rank : 152)
Query Neighborhood Hits	109	Target Neighborhood Hits	350	Shared Neighborhood Hits	61
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

TITF1_HUMAN
θ value	θ > 10 (rank : 241)	NC score	0.054376 (rank : 184)
Query Neighborhood Hits	109	Target Neighborhood Hits	332	Shared Neighborhood Hits	47
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

TITF1_MOUSE
θ value	θ > 10 (rank : 242)	NC score	0.053114 (rank : 191)
Query Neighborhood Hits	109	Target Neighborhood Hits	335	Shared Neighborhood Hits	47
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

TLX3_MOUSE
θ value	θ > 10 (rank : 243)	NC score	0.053448 (rank : 189)
Query Neighborhood Hits	109	Target Neighborhood Hits	346	Shared Neighborhood Hits	54
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

ZHX1_HUMAN
θ value	θ > 10 (rank : 244)	NC score	0.069107 (rank : 100)
Query Neighborhood Hits	109	Target Neighborhood Hits	307	Shared Neighborhood Hits	50
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX1_MOUSE
θ value	θ > 10 (rank : 245)	NC score	0.064833 (rank : 117)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	46
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

ZHX2_HUMAN
θ value	θ > 10 (rank : 246)	NC score	0.072139 (rank : 85)
Query Neighborhood Hits	109	Target Neighborhood Hits	347	Shared Neighborhood Hits	41
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ZHX2_MOUSE
θ value	θ > 10 (rank : 247)	NC score	0.072002 (rank : 86)
Query Neighborhood Hits	109	Target Neighborhood Hits	435	Shared Neighborhood Hits	45
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ZHX3_HUMAN
θ value	θ > 10 (rank : 248)	NC score	0.087096 (rank : 64)
Query Neighborhood Hits	109	Target Neighborhood Hits	331	Shared Neighborhood Hits	51
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

ZHX3_MOUSE
θ value	θ > 10 (rank : 249)	NC score	0.109289 (rank : 56)
Query Neighborhood Hits	109	Target Neighborhood Hits	321	Shared Neighborhood Hits	60
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

Hits sorted by NC score

TGIF_HUMAN
NC score	0.999962 (rank : 1)	θ value	0 (rank : 1)
Query Neighborhood Hits	109	Target Neighborhood Hits	109	Shared Neighborhood Hits	109
SwissProt Accessions	Q15583, Q6ICR0, Q8N5X9, Q9NRS0	Gene names	TGIF
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF_MOUSE
NC score	0.986280 (rank : 2)	θ value	5.26011e-125 (rank : 2)
Query Neighborhood Hits	109	Target Neighborhood Hits	125	Shared Neighborhood Hits	76
SwissProt Accessions	P70284, Q921F9, Q99JS3	Gene names	Tgif
Domain Architecture
Description	5'-TG-3'-interacting factor (Homeobox protein TGIF).

TGIF2_HUMAN
NC score	0.951049 (rank : 3)	θ value	1.04822e-48 (rank : 4)
Query Neighborhood Hits	109	Target Neighborhood Hits	94	Shared Neighborhood Hits	66
SwissProt Accessions	Q9GZN2	Gene names	TGIF2
Domain Architecture
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TGIF2_MOUSE
NC score	0.944705 (rank : 4)	θ value	4.25575e-50 (rank : 3)
Query Neighborhood Hits	109	Target Neighborhood Hits	127	Shared Neighborhood Hits	67
SwissProt Accessions	Q8C0Y1	Gene names	Tgif2
Domain Architecture	No domain graphic available
Description	Homeobox protein TGIF2 (TGFB-induced factor 2) (5'-TG-3'-interacting factor 2) (TGF(beta)-induced transcription factor 2).

TF2LX_HUMAN
NC score	0.901235 (rank : 5)	θ value	1.62847e-25 (rank : 5)
Query Neighborhood Hits	109	Target Neighborhood Hits	108	Shared Neighborhood Hits	66
SwissProt Accessions	Q8IUE1	Gene names	TGIF2LX, TGIFLX
Domain Architecture
Description	Homeobox protein TGIF2LX (TGFB-induced factor 2-like protein, X- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the X).

TF2LY_HUMAN
NC score	0.899723 (rank : 6)	θ value	3.62785e-25 (rank : 6)
Query Neighborhood Hits	109	Target Neighborhood Hits	90	Shared Neighborhood Hits	63
SwissProt Accessions	Q8IUE0	Gene names	TGIF2LY, TGIFLY
Domain Architecture
Description	Homeobox protein TGIF2LY (TGFB-induced factor 2-like protein, Y- linked) (TGF(beta)induced transcription factor 2-like protein) (TGIF- like on the Y).

PKNX2_HUMAN
NC score	0.755534 (rank : 7)	θ value	5.8054e-15 (rank : 7)
Query Neighborhood Hits	109	Target Neighborhood Hits	133	Shared Neighborhood Hits	63
SwissProt Accessions	Q96KN3, Q63HL6, Q86XD1	Gene names	PKNOX2, PREP2
Domain Architecture
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX1_MOUSE
NC score	0.749073 (rank : 8)	θ value	3.18553e-13 (rank : 12)
Query Neighborhood Hits	109	Target Neighborhood Hits	103	Shared Neighborhood Hits	59
SwissProt Accessions	O70477	Gene names	Pknox1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1).

PKNX2_MOUSE
NC score	0.749001 (rank : 9)	θ value	5.8054e-15 (rank : 8)
Query Neighborhood Hits	109	Target Neighborhood Hits	197	Shared Neighborhood Hits	66
SwissProt Accessions	Q8BG99, Q8R4B0	Gene names	Pknox2, Prep2
Domain Architecture	No domain graphic available
Description	Homeobox protein PKNOX2 (PBX/knotted homeobox 2) (Homeobox protein PREP-2).

PKNX1_HUMAN
NC score	0.746984 (rank : 10)	θ value	3.18553e-13 (rank : 11)
Query Neighborhood Hits	109	Target Neighborhood Hits	101	Shared Neighborhood Hits	58
SwissProt Accessions	P55347, O00528, Q8IWT7	Gene names	PKNOX1, PREP1
Domain Architecture
Description	Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1).

MEIS3_MOUSE
NC score	0.740057 (rank : 11)	θ value	6.41864e-14 (rank : 9)
Query Neighborhood Hits	109	Target Neighborhood Hits	118	Shared Neighborhood Hits	61
SwissProt Accessions	P97368, Q99L81	Gene names	Meis3, Mrg2
Domain Architecture
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS3_HUMAN
NC score	0.737145 (rank : 12)	θ value	1.42992e-13 (rank : 10)
Query Neighborhood Hits	109	Target Neighborhood Hits	118	Shared Neighborhood Hits	60
SwissProt Accessions	Q99687, Q6NT73, Q8TC66, Q9NPW2	Gene names	MEIS3, MRG2
Domain Architecture	No domain graphic available
Description	Homeobox protein Meis3 (Meis1-related protein 2).

MEIS1_MOUSE
NC score	0.719705 (rank : 13)	θ value	2.69671e-12 (rank : 14)
Query Neighborhood Hits	109	Target Neighborhood Hits	115	Shared Neighborhood Hits	63
SwissProt Accessions	Q60954, Q5SVC8, Q60955, Q8CIL0	Gene names	Meis1
Domain Architecture
Description	Homeobox protein Meis1 (Myeloid ecotropic viral integration site 1).

MEIS1_HUMAN
NC score	0.719697 (rank : 14)	θ value	2.69671e-12 (rank : 13)
Query Neighborhood Hits	109	Target Neighborhood Hits	115	Shared Neighborhood Hits	63
SwissProt Accessions	O00470	Gene names	MEIS1
Domain Architecture
Description	Homeobox protein Meis1.

MEIS2_HUMAN
NC score	0.703590 (rank : 15)	θ value	7.84624e-12 (rank : 15)
Query Neighborhood Hits	109	Target Neighborhood Hits	182	Shared Neighborhood Hits	60
SwissProt Accessions	O14770, Q96KI4, Q96KI5, Q9NRS1, Q9NRS2, Q9NRS3	Gene names	MEIS2, MRG1
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

MEIS2_MOUSE
NC score	0.701109 (rank : 16)	θ value	7.84624e-12 (rank : 16)
Query Neighborhood Hits	109	Target Neighborhood Hits	208	Shared Neighborhood Hits	61
SwissProt Accessions	P97367, O35676, O35677, P97403, P97404	Gene names	Meis2, Mrg1, Stra10
Domain Architecture
Description	Homeobox protein Meis2 (Meis1-related protein 1).

IRX4_HUMAN
NC score	0.627949 (rank : 17)	θ value	2.79066e-09 (rank : 19)
Query Neighborhood Hits	109	Target Neighborhood Hits	276	Shared Neighborhood Hits	67
SwissProt Accessions	P78413, Q9UHR2	Gene names	IRX4, IRXA3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX6_MOUSE
NC score	0.626878 (rank : 18)	θ value	1.63604e-09 (rank : 17)
Query Neighborhood Hits	109	Target Neighborhood Hits	256	Shared Neighborhood Hits	62
SwissProt Accessions	Q9ER75	Gene names	Irx6, Irxb3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX4_MOUSE
NC score	0.624632 (rank : 19)	θ value	2.13673e-09 (rank : 18)
Query Neighborhood Hits	109	Target Neighborhood Hits	286	Shared Neighborhood Hits	66
SwissProt Accessions	Q9QY61	Gene names	Irx4, Irxa3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-4 (Iroquois homeobox protein 4) (Homeodomain protein IRXA3).

IRX6_HUMAN
NC score	0.623995 (rank : 20)	θ value	1.80886e-08 (rank : 20)
Query Neighborhood Hits	109	Target Neighborhood Hits	262	Shared Neighborhood Hits	65
SwissProt Accessions	P78412, Q7Z2K0	Gene names	IRX6, IRX7, IRXB3
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-6 (Iroquois homeobox protein 6) (Homeodomain protein IRXB3).

IRX1_MOUSE
NC score	0.622248 (rank : 21)	θ value	5.26297e-08 (rank : 24)
Query Neighborhood Hits	109	Target Neighborhood Hits	269	Shared Neighborhood Hits	63
SwissProt Accessions	P81068, O55120, Q9JLL6	Gene names	Irx1, Irxa1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX1_HUMAN
NC score	0.621059 (rank : 22)	θ value	5.26297e-08 (rank : 23)
Query Neighborhood Hits	109	Target Neighborhood Hits	285	Shared Neighborhood Hits	61
SwissProt Accessions	P78414, Q7Z2F8, Q8N312	Gene names	IRX1, IRXA1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1).

IRX3_MOUSE
NC score	0.619485 (rank : 23)	θ value	4.0297e-08 (rank : 22)
Query Neighborhood Hits	109	Target Neighborhood Hits	303	Shared Neighborhood Hits	64
SwissProt Accessions	P81067	Gene names	Irx3, Irxb1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX3_HUMAN
NC score	0.618810 (rank : 24)	θ value	4.0297e-08 (rank : 21)
Query Neighborhood Hits	109	Target Neighborhood Hits	342	Shared Neighborhood Hits	66
SwissProt Accessions	P78415, Q7Z4A4, Q7Z4A5, Q8IVC6	Gene names	IRX3, IRXB1
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1).

IRX2_MOUSE
NC score	0.600602 (rank : 25)	θ value	2.61198e-07 (rank : 26)
Query Neighborhood Hits	109	Target Neighborhood Hits	264	Shared Neighborhood Hits	62
SwissProt Accessions	P81066, O55121, Q9ERN1	Gene names	Irx2, Irxa2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

IRX5_HUMAN
NC score	0.594015 (rank : 26)	θ value	2.61198e-07 (rank : 27)
Query Neighborhood Hits	109	Target Neighborhood Hits	362	Shared Neighborhood Hits	63
SwissProt Accessions	P78411, P78416, Q7Z2E1	Gene names	IRX5, IRX2A, IRXB2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2) (IRX-2A).

IRX5_MOUSE
NC score	0.591268 (rank : 27)	θ value	2.61198e-07 (rank : 28)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	62
SwissProt Accessions	Q9JKQ4, Q80WV4, Q9JLL5	Gene names	Irx5, Irxb2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-5 (Iroquois homeobox protein 5) (Homeodomain protein IRXB2).

IRX2_HUMAN
NC score	0.586330 (rank : 28)	θ value	2.61198e-07 (rank : 25)
Query Neighborhood Hits	109	Target Neighborhood Hits	358	Shared Neighborhood Hits	67
SwissProt Accessions	Q9BZI1, Q7Z2I7	Gene names	IRX2, IRXA2
Domain Architecture
Description	Iroquois-class homeodomain protein IRX-2 (Iroquois homeobox protein 2) (Homeodomain protein IRXA2).

PBX4_MOUSE
NC score	0.553726 (rank : 29)	θ value	1.69304e-06 (rank : 35)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	75
SwissProt Accessions	Q99NE9, Q8CFL2, Q99NE8	Gene names	Pbx4
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4).

PBX2_MOUSE
NC score	0.537158 (rank : 30)	θ value	7.59969e-07 (rank : 34)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	76
SwissProt Accessions	O35984	Gene names	Pbx2
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2).

PBX2_HUMAN
NC score	0.536997 (rank : 31)	θ value	7.59969e-07 (rank : 33)
Query Neighborhood Hits	109	Target Neighborhood Hits	350	Shared Neighborhood Hits	76
SwissProt Accessions	P40425	Gene names	PBX2, G17
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17).

PBX1_HUMAN
NC score	0.536675 (rank : 32)	θ value	7.59969e-07 (rank : 31)
Query Neighborhood Hits	109	Target Neighborhood Hits	317	Shared Neighborhood Hits	76
SwissProt Accessions	P40424	Gene names	PBX1, PRL
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1) (Homeobox protein PRL).

PBX1_MOUSE
NC score	0.536675 (rank : 33)	θ value	7.59969e-07 (rank : 32)
Query Neighborhood Hits	109	Target Neighborhood Hits	317	Shared Neighborhood Hits	76
SwissProt Accessions	P41778	Gene names	Pbx1, Pbx-1
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1).

PBX3_MOUSE
NC score	0.536478 (rank : 34)	θ value	4.45536e-07 (rank : 30)
Query Neighborhood Hits	109	Target Neighborhood Hits	306	Shared Neighborhood Hits	74
SwissProt Accessions	O35317, Q925W2	Gene names	Pbx3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

PBX3_HUMAN
NC score	0.536447 (rank : 35)	θ value	4.45536e-07 (rank : 29)
Query Neighborhood Hits	109	Target Neighborhood Hits	306	Shared Neighborhood Hits	74
SwissProt Accessions	P40426, Q96PF9, Q96PG0	Gene names	PBX3
Domain Architecture
Description	Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3).

SIX2_MOUSE
NC score	0.418906 (rank : 36)	θ value	9.29e-05 (rank : 36)
Query Neighborhood Hits	109	Target Neighborhood Hits	376	Shared Neighborhood Hits	80
SwissProt Accessions	Q62232, P70179	Gene names	Six2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX2_HUMAN
NC score	0.414868 (rank : 37)	θ value	0.00134147 (rank : 39)
Query Neighborhood Hits	109	Target Neighborhood Hits	345	Shared Neighborhood Hits	80
SwissProt Accessions	Q9NPC8, Q9BXH7	Gene names	SIX2
Domain Architecture
Description	Homeobox protein SIX2 (Sine oculis homeobox homolog 2).

SIX1_MOUSE
NC score	0.409545 (rank : 38)	θ value	0.000158464 (rank : 38)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	78
SwissProt Accessions	Q62231, Q8CIL7	Gene names	Six1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX1_HUMAN
NC score	0.409348 (rank : 39)	θ value	0.000158464 (rank : 37)
Query Neighborhood Hits	109	Target Neighborhood Hits	343	Shared Neighborhood Hits	78
SwissProt Accessions	Q15475, Q96H64	Gene names	SIX1
Domain Architecture
Description	Homeobox protein SIX1 (Sine oculis homeobox homolog 1).

SIX6_MOUSE
NC score	0.359386 (rank : 40)	θ value	0.0736092 (rank : 50)
Query Neighborhood Hits	109	Target Neighborhood Hits	267	Shared Neighborhood Hits	69
SwissProt Accessions	Q9QZ28, O88423	Gene names	Six6, Optx2, Six9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Six9 protein).

SIX3_HUMAN
NC score	0.358336 (rank : 41)	θ value	0.0736092 (rank : 47)
Query Neighborhood Hits	109	Target Neighborhood Hits	285	Shared Neighborhood Hits	72
SwissProt Accessions	O95343	Gene names	SIX3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX3_MOUSE
NC score	0.358289 (rank : 42)	θ value	0.0736092 (rank : 48)
Query Neighborhood Hits	109	Target Neighborhood Hits	289	Shared Neighborhood Hits	72
SwissProt Accessions	Q62233, P70176, P70177	Gene names	Six3
Domain Architecture
Description	Homeobox protein SIX3 (Sine oculis homeobox homolog 3).

SIX6_HUMAN
NC score	0.358062 (rank : 43)	θ value	0.0736092 (rank : 49)
Query Neighborhood Hits	109	Target Neighborhood Hits	269	Shared Neighborhood Hits	69
SwissProt Accessions	O95475, Q9P1X8	Gene names	SIX6, OPTX2, SIX9
Domain Architecture
Description	Homeobox protein SIX6 (Sine oculis homeobox homolog 6) (Optic homeobox 2) (Homeodomain protein OPTX2).

SIX4_MOUSE
NC score	0.351042 (rank : 44)	θ value	0.0330416 (rank : 45)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	70
SwissProt Accessions	Q61321, Q61322, Q61323	Gene names	Six4, Arec3
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4) (Skeletal muscle-specific ARE-binding protein AREC3).

SIX4_HUMAN
NC score	0.348222 (rank : 45)	θ value	0.0330416 (rank : 44)
Query Neighborhood Hits	109	Target Neighborhood Hits	342	Shared Neighborhood Hits	66
SwissProt Accessions	Q9UIU6	Gene names	SIX4
Domain Architecture
Description	Homeobox protein SIX4 (Sine oculis homeobox homolog 4).

SIX5_HUMAN
NC score	0.346075 (rank : 46)	θ value	0.0431538 (rank : 46)
Query Neighborhood Hits	109	Target Neighborhood Hits	386	Shared Neighborhood Hits	68
SwissProt Accessions	Q8N196	Gene names	SIX5, DMAHP
Domain Architecture	No domain graphic available
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein).

SIX5_MOUSE
NC score	0.336030 (rank : 47)	θ value	0.62314 (rank : 62)
Query Neighborhood Hits	109	Target Neighborhood Hits	354	Shared Neighborhood Hits	66
SwissProt Accessions	P70178	Gene names	Six5, Dmahp
Domain Architecture
Description	Homeobox protein SIX5 (DM locus-associated homeodomain protein homolog).

HNF6_HUMAN
NC score	0.172024 (rank : 48)	θ value	0.365318 (rank : 54)
Query Neighborhood Hits	109	Target Neighborhood Hits	127	Shared Neighborhood Hits	38
SwissProt Accessions	Q9UBC0, Q99744, Q9UMR6	Gene names	ONECUT1, HNF6, HNF6A
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

ONEC2_HUMAN
NC score	0.169693 (rank : 49)	θ value	1.38821 (rank : 67)
Query Neighborhood Hits	109	Target Neighborhood Hits	115	Shared Neighborhood Hits	39
SwissProt Accessions	O95948	Gene names	ONECUT2
Domain Architecture
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

HNF6_MOUSE
NC score	0.169032 (rank : 50)	θ value	0.365318 (rank : 55)
Query Neighborhood Hits	109	Target Neighborhood Hits	124	Shared Neighborhood Hits	38
SwissProt Accessions	O08755	Gene names	Onecut1, Hnf6, Hnf6a
Domain Architecture
Description	Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1).

ONEC2_MOUSE
NC score	0.167931 (rank : 51)	θ value	1.38821 (rank : 68)
Query Neighborhood Hits	109	Target Neighborhood Hits	123	Shared Neighborhood Hits	39
SwissProt Accessions	Q6XBJ3	Gene names	Onecut2, Oc2
Domain Architecture	No domain graphic available
Description	One cut domain family member 2 (Transcription factor ONECUT-2) (OC-2).

CUTL2_MOUSE
NC score	0.167867 (rank : 52)	θ value	0.0113563 (rank : 42)
Query Neighborhood Hits	109	Target Neighborhood Hits	771	Shared Neighborhood Hits	61
SwissProt Accessions	P70298	Gene names	Cutl2
Domain Architecture
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

CUTL2_HUMAN
NC score	0.156001 (rank : 53)	θ value	0.0252991 (rank : 43)
Query Neighborhood Hits	109	Target Neighborhood Hits	906	Shared Neighborhood Hits	65
SwissProt Accessions	O14529	Gene names	CUTL2, KIAA0293
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2).

HXD10_MOUSE
NC score	0.111546 (rank : 54)	θ value	0.00298849 (rank : 40)
Query Neighborhood Hits	109	Target Neighborhood Hits	392	Shared Neighborhood Hits	59
SwissProt Accessions	P28359, Q91WU9	Gene names	Hoxd10, Hox-4.5, Hoxd-10
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4.5) (Hox-5.3).

HXD10_HUMAN
NC score	0.110268 (rank : 55)	θ value	0.00869519 (rank : 41)
Query Neighborhood Hits	109	Target Neighborhood Hits	392	Shared Neighborhood Hits	59
SwissProt Accessions	P28358	Gene names	HOXD10, HOX4D
Domain Architecture
Description	Homeobox protein Hox-D10 (Hox-4D) (Hox-4E).

ZHX3_MOUSE
NC score	0.109289 (rank : 56)	θ value	θ > 10 (rank : 249)
Query Neighborhood Hits	109	Target Neighborhood Hits	321	Shared Neighborhood Hits	60
SwissProt Accessions	Q8C0Q2, Q80U14	Gene names	Zhx3, Kiaa0395, Tix1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

HXC10_MOUSE
NC score	0.103576 (rank : 57)	θ value	0.163984 (rank : 52)
Query Neighborhood Hits	109	Target Neighborhood Hits	417	Shared Neighborhood Hits	59
SwissProt Accessions	P31257, P31312, Q7TMT7	Gene names	Hoxc10, Hox-3.6, Hoxc-10
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-C10 (Hox-3.6).

HXC10_HUMAN
NC score	0.102713 (rank : 58)	θ value	0.125558 (rank : 51)
Query Neighborhood Hits	109	Target Neighborhood Hits	417	Shared Neighborhood Hits	59
SwissProt Accessions	Q9NYD6, O15219, O15220, Q9BVD5	Gene names	HOXC10
Domain Architecture
Description	Homeobox protein Hox-C10.

HMBX1_HUMAN
NC score	0.094572 (rank : 59)	θ value	1.38821 (rank : 66)
Query Neighborhood Hits	109	Target Neighborhood Hits	118	Shared Neighborhood Hits	28
SwissProt Accessions	Q6NT76, Q3Y6P1, Q96GS5, Q9H701	Gene names	HMBOX1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

LBX1_HUMAN
NC score	0.094094 (rank : 60)	θ value	1.06291 (rank : 65)
Query Neighborhood Hits	109	Target Neighborhood Hits	357	Shared Neighborhood Hits	66
SwissProt Accessions	P52954	Gene names	LBX1
Domain Architecture
Description	Transcription factor LBX1.

LBX1_MOUSE
NC score	0.093970 (rank : 61)	θ value	0.62314 (rank : 60)
Query Neighborhood Hits	109	Target Neighborhood Hits	349	Shared Neighborhood Hits	64
SwissProt Accessions	P52955	Gene names	Lbx1, Lbx1h
Domain Architecture
Description	Transcription factor LBX1.

HXA10_HUMAN
NC score	0.090024 (rank : 62)	θ value	0.62314 (rank : 58)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	53
SwissProt Accessions	P31260, O43370, O43605, Q15949	Gene names	HOXA10, HOX1H
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL).

HXA10_MOUSE
NC score	0.089187 (rank : 63)	θ value	0.62314 (rank : 59)
Query Neighborhood Hits	109	Target Neighborhood Hits	365	Shared Neighborhood Hits	53
SwissProt Accessions	P31310, Q80Y22	Gene names	Hoxa10, Hox-1.8, Hoxa-10
Domain Architecture
Description	Homeobox protein Hox-A10 (Hox-1.8).

ZHX3_HUMAN
NC score	0.087096 (rank : 64)	θ value	θ > 10 (rank : 248)
Query Neighborhood Hits	109	Target Neighborhood Hits	331	Shared Neighborhood Hits	51
SwissProt Accessions	Q9H4I2, O43145	Gene names	ZHX3, KIAA0395, TIX1
Domain Architecture
Description	Zinc finger and homeodomain protein 3 (Triple homeobox protein 1).

HXD11_HUMAN
NC score	0.085908 (rank : 65)	θ value	0.21417 (rank : 53)
Query Neighborhood Hits	109	Target Neighborhood Hits	353	Shared Neighborhood Hits	55
SwissProt Accessions	P31277, Q9NS02	Gene names	HOXD11, HOX4F
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4F).

PITX3_MOUSE
NC score	0.085785 (rank : 66)	θ value	θ > 10 (rank : 232)
Query Neighborhood Hits	109	Target Neighborhood Hits	380	Shared Neighborhood Hits	67
SwissProt Accessions	O35160	Gene names	Pitx3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX3_HUMAN
NC score	0.085064 (rank : 67)	θ value	θ > 10 (rank : 231)
Query Neighborhood Hits	109	Target Neighborhood Hits	366	Shared Neighborhood Hits	66
SwissProt Accessions	O75364	Gene names	PITX3, PTX3
Domain Architecture
Description	Pituitary homeobox 3 (Homeobox protein PITX3).

PITX2_HUMAN
NC score	0.083578 (rank : 68)	θ value	θ > 10 (rank : 229)
Query Neighborhood Hits	109	Target Neighborhood Hits	381	Shared Neighborhood Hits	65
SwissProt Accessions	Q99697, O60578, O60579, O60580, Q9BY17	Gene names	PITX2, ARP1, RGS, RIEG, RIEG1
Domain Architecture
Description	Pituitary homeobox 2 (RIEG bicoid-related homeobox transcription factor) (Solurshin) (ALL1-responsive protein ARP1).

PITX2_MOUSE
NC score	0.083259 (rank : 69)	θ value	θ > 10 (rank : 230)
Query Neighborhood Hits	109	Target Neighborhood Hits	383	Shared Neighborhood Hits	65
SwissProt Accessions	P97474, O08646, O70336, P97933, Q9JLA0, Q9QXB8, Q9R1V9, Q9Z141	Gene names	Pitx2, Arp1, Brx1, Otlx2, Ptx2, Rgs
Domain Architecture
Description	Pituitary homeobox 2 (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30).

BSH_MOUSE
NC score	0.083023 (rank : 70)	θ value	θ > 10 (rank : 116)
Query Neighborhood Hits	109	Target Neighborhood Hits	349	Shared Neighborhood Hits	60
SwissProt Accessions	Q810B3	Gene names	Bsx
Domain Architecture	No domain graphic available
Description	Brain-specific homeobox protein homolog.

HXB8_HUMAN
NC score	0.081871 (rank : 71)	θ value	θ > 10 (rank : 179)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	48
SwissProt Accessions	P17481, Q9H1I2	Gene names	HOXB8, HOX2D
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4).

HXC8_MOUSE
NC score	0.081467 (rank : 72)	θ value	θ > 10 (rank : 190)
Query Neighborhood Hits	109	Target Neighborhood Hits	327	Shared Neighborhood Hits	53
SwissProt Accessions	P09025	Gene names	Hoxc8, Hox-3.1, Hoxc-8
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3.1) (M31).

HXC8_HUMAN
NC score	0.081454 (rank : 73)	θ value	θ > 10 (rank : 189)
Query Neighborhood Hits	109	Target Neighborhood Hits	327	Shared Neighborhood Hits	53
SwissProt Accessions	P31273, O15221, O15362	Gene names	HOXC8, HOX3A
Domain Architecture
Description	Homeobox protein Hox-C8 (Hox-3A).

HXD8_MOUSE
NC score	0.081404 (rank : 74)	θ value	θ > 10 (rank : 201)
Query Neighborhood Hits	109	Target Neighborhood Hits	333	Shared Neighborhood Hits	50
SwissProt Accessions	P23463	Gene names	Hoxd8, Hox-4.3, Hoxd-8
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4).

HXB8_MOUSE
NC score	0.081371 (rank : 75)	θ value	θ > 10 (rank : 180)
Query Neighborhood Hits	109	Target Neighborhood Hits	325	Shared Neighborhood Hits	49
SwissProt Accessions	P09632	Gene names	Hoxb8, Hox-2.4, Hoxb-8
Domain Architecture
Description	Homeobox protein Hox-B8 (Hox-2.4).

HXD8_HUMAN
NC score	0.080440 (rank : 76)	θ value	θ > 10 (rank : 200)
Query Neighborhood Hits	109	Target Neighborhood Hits	338	Shared Neighborhood Hits	49
SwissProt Accessions	P13378	Gene names	HOXD8, HOX4E
Domain Architecture
Description	Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4).

HMBX1_MOUSE
NC score	0.080091 (rank : 77)	θ value	2.36792 (rank : 73)
Query Neighborhood Hits	109	Target Neighborhood Hits	117	Shared Neighborhood Hits	25
SwissProt Accessions	Q8BJA3, Q80WC2, Q8BWE7, Q99LV1	Gene names	Hmbox1
Domain Architecture	No domain graphic available
Description	Homeobox-containing protein 1.

PO6F2_MOUSE
NC score	0.079955 (rank : 78)	θ value	2.36792 (rank : 77)
Query Neighborhood Hits	109	Target Neighborhood Hits	639	Shared Neighborhood Hits	57
SwissProt Accessions	Q8BJI4	Gene names	Pou6f2
Domain Architecture	No domain graphic available
Description	POU domain, class 6, transcription factor 2.

PO6F2_HUMAN
NC score	0.077221 (rank : 79)	θ value	2.36792 (rank : 76)
Query Neighborhood Hits	109	Target Neighborhood Hits	618	Shared Neighborhood Hits	55
SwissProt Accessions	P78424, P78425, Q75ME8, Q86UM6, Q9UDS7	Gene names	POU6F2, RPF1
Domain Architecture
Description	POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor 1) (RPF-1).

HXD11_MOUSE
NC score	0.076595 (rank : 80)	θ value	5.27518 (rank : 91)
Query Neighborhood Hits	109	Target Neighborhood Hits	376	Shared Neighborhood Hits	54
SwissProt Accessions	P23813	Gene names	Hoxd11, Hox-4.6, Hoxd-11
Domain Architecture
Description	Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5).

HXC11_HUMAN
NC score	0.073456 (rank : 81)	θ value	3.0926 (rank : 86)
Query Neighborhood Hits	109	Target Neighborhood Hits	349	Shared Neighborhood Hits	48
SwissProt Accessions	O43248, Q96DH2	Gene names	HOXC11
Domain Architecture
Description	Homeobox protein Hox-C11.

HXA7_MOUSE
NC score	0.073379 (rank : 82)	θ value	θ > 10 (rank : 166)
Query Neighborhood Hits	109	Target Neighborhood Hits	318	Shared Neighborhood Hits	48
SwissProt Accessions	P02830, Q544P0	Gene names	Hoxa7, Hox-1.1, Hoxa-7
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6).

DLX6_HUMAN
NC score	0.072775 (rank : 83)	θ value	θ > 10 (rank : 132)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	65
SwissProt Accessions	P56179, Q3ZAR6, Q9UPL2	Gene names	DLX6
Domain Architecture
Description	Homeobox protein DLX-6.

NKX61_MOUSE
NC score	0.072151 (rank : 84)	θ value	θ > 10 (rank : 220)
Query Neighborhood Hits	109	Target Neighborhood Hits	439	Shared Neighborhood Hits	59
SwissProt Accessions	Q99MA9, Q9ERQ7	Gene names	Nkx6-1, Nkx6.1, Nkx6a
Domain Architecture
Description	Homeobox protein Nkx-6.1.

ZHX2_HUMAN
NC score	0.072139 (rank : 85)	θ value	θ > 10 (rank : 246)
Query Neighborhood Hits	109	Target Neighborhood Hits	347	Shared Neighborhood Hits	41
SwissProt Accessions	Q9Y6X8	Gene names	ZHX2, AFR1, KIAA0854, RAF
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

ZHX2_MOUSE
NC score	0.072002 (rank : 86)	θ value	θ > 10 (rank : 247)
Query Neighborhood Hits	109	Target Neighborhood Hits	435	Shared Neighborhood Hits	45
SwissProt Accessions	Q8C0C0	Gene names	Zhx2, Afr1, Raf
Domain Architecture
Description	Zinc fingers and homeoboxes protein 2 (Zinc finger and homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP).

HXB7_MOUSE
NC score	0.071115 (rank : 87)	θ value	θ > 10 (rank : 178)
Query Neighborhood Hits	109	Target Neighborhood Hits	314	Shared Neighborhood Hits	47
SwissProt Accessions	P09024, Q3UW15	Gene names	Hoxb7, Hox-2.3, Hoxb-7
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (Homeobox protein MH-22B).

HXB13_HUMAN
NC score	0.070895 (rank : 88)	θ value	θ > 10 (rank : 169)
Query Neighborhood Hits	109	Target Neighborhood Hits	377	Shared Neighborhood Hits	57
SwissProt Accessions	Q92826, Q96QM4, Q99810	Gene names	HOXB13
Domain Architecture
Description	Homeobox protein Hox-B13.

PITX1_MOUSE
NC score	0.070572 (rank : 89)	θ value	θ > 10 (rank : 228)
Query Neighborhood Hits	109	Target Neighborhood Hits	362	Shared Neighborhood Hits	61
SwissProt Accessions	P70314, O54742, P70427	Gene names	Pitx1, Bft, Potx, Ptx1
Domain Architecture
Description	Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb expressed homeobox protein backfoot) (Ptx1).

HXA9_MOUSE
NC score	0.070461 (rank : 90)	θ value	θ > 10 (rank : 168)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	57
SwissProt Accessions	P09631, O70154, O70155	Gene names	Hoxa9, Hox-1.7, Hoxa-9
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1.7).

HXA9_HUMAN
NC score	0.070305 (rank : 91)	θ value	θ > 10 (rank : 167)
Query Neighborhood Hits	109	Target Neighborhood Hits	332	Shared Neighborhood Hits	57
SwissProt Accessions	P31269, O43369, O43429, Q99820	Gene names	HOXA9, HOX1G
Domain Architecture
Description	Homeobox protein Hox-A9 (Hox-1G).

HXA1_MOUSE
NC score	0.070270 (rank : 92)	θ value	θ > 10 (rank : 160)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	53
SwissProt Accessions	P09022, P15463	Gene names	Hoxa1, Era-1, Hox-1.6, Hoxa-1
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399).

ALX3_HUMAN
NC score	0.070003 (rank : 93)	θ value	θ > 10 (rank : 110)
Query Neighborhood Hits	109	Target Neighborhood Hits	380	Shared Neighborhood Hits	62
SwissProt Accessions	O95076, O95075	Gene names	ALX3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

ALX3_MOUSE
NC score	0.069978 (rank : 94)	θ value	θ > 10 (rank : 111)
Query Neighborhood Hits	109	Target Neighborhood Hits	386	Shared Neighborhood Hits	61
SwissProt Accessions	O70137	Gene names	Alx3
Domain Architecture
Description	Homeobox protein aristaless-like 3 (Proline-rich transcription factor ALX3).

HXA1_HUMAN
NC score	0.069523 (rank : 95)	θ value	θ > 10 (rank : 159)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	51
SwissProt Accessions	P49639, O43363	Gene names	HOXA1, HOX1F
Domain Architecture
Description	Homeobox protein Hox-A1 (Hox-1F).

HXC9_MOUSE
NC score	0.069423 (rank : 96)	θ value	θ > 10 (rank : 192)
Query Neighborhood Hits	109	Target Neighborhood Hits	338	Shared Neighborhood Hits	53
SwissProt Accessions	P09633	Gene names	Hoxc9, Hox-3.2, Hoxc-9
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3.2).

HXC9_HUMAN
NC score	0.069411 (rank : 97)	θ value	θ > 10 (rank : 191)
Query Neighborhood Hits	109	Target Neighborhood Hits	339	Shared Neighborhood Hits	53
SwissProt Accessions	P31274, Q9H1I0	Gene names	HOXC9, HOX3B
Domain Architecture
Description	Homeobox protein Hox-C9 (Hox-3B).

HXA6_HUMAN
NC score	0.069328 (rank : 98)	θ value	θ > 10 (rank : 163)
Query Neighborhood Hits	109	Target Neighborhood Hits	309	Shared Neighborhood Hits	50
SwissProt Accessions	P31267, Q9UPM0	Gene names	HOXA6, HOX1B
Domain Architecture	No domain graphic available
Description	Homeobox protein Hox-A6 (Hox-1B).

NKX28_MOUSE
NC score	0.069110 (rank : 99)	θ value	θ > 10 (rank : 218)
Query Neighborhood Hits	109	Target Neighborhood Hits	347	Shared Neighborhood Hits	64
SwissProt Accessions	O70584	Gene names	Nkx2-8, Nkx-2.9, Nkx2-9, Nkx2h
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H) (Homeobox protein Nkx-2.9).

ZHX1_HUMAN
NC score	0.069107 (rank : 100)	θ value	θ > 10 (rank : 244)
Query Neighborhood Hits	109	Target Neighborhood Hits	307	Shared Neighborhood Hits	50
SwissProt Accessions	Q9UKY1, Q8IWD8	Gene names	ZHX1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

DLX5_MOUSE
NC score	0.068770 (rank : 101)	θ value	θ > 10 (rank : 131)
Query Neighborhood Hits	109	Target Neighborhood Hits	434	Shared Neighborhood Hits	62
SwissProt Accessions	P70396, O54876, O54877, O54878, Q9JJ45	Gene names	Dlx5
Domain Architecture
Description	Homeobox protein DLX-5.

NKX61_HUMAN
NC score	0.068683 (rank : 102)	θ value	θ > 10 (rank : 219)
Query Neighborhood Hits	109	Target Neighborhood Hits	431	Shared Neighborhood Hits	59
SwissProt Accessions	P78426	Gene names	NKX6-1, NKX6A
Domain Architecture
Description	Homeobox protein Nkx-6.1.

HXB7_HUMAN
NC score	0.068501 (rank : 103)	θ value	θ > 10 (rank : 177)
Query Neighborhood Hits	109	Target Neighborhood Hits	311	Shared Neighborhood Hits	47
SwissProt Accessions	P09629, Q15957	Gene names	HOXB7, HOX2C
Domain Architecture
Description	Homeobox protein Hox-B7 (Hox-2C) (HHO.C1).

DLX1_MOUSE
NC score	0.068050 (rank : 104)	θ value	θ > 10 (rank : 123)
Query Neighborhood Hits	109	Target Neighborhood Hits	343	Shared Neighborhood Hits	61
SwissProt Accessions	Q64317	Gene names	Dlx1
Domain Architecture
Description	Homeobox protein DLX-1.

DLX1_HUMAN
NC score	0.067998 (rank : 105)	θ value	θ > 10 (rank : 122)
Query Neighborhood Hits	109	Target Neighborhood Hits	343	Shared Neighborhood Hits	61
SwissProt Accessions	P56177, Q53ZU4, Q8IYB2	Gene names	DLX1
Domain Architecture
Description	Homeobox protein DLX-1.

EMX2_MOUSE
NC score	0.067563 (rank : 106)	θ value	θ > 10 (rank : 139)
Query Neighborhood Hits	109	Target Neighborhood Hits	340	Shared Neighborhood Hits	59
SwissProt Accessions	Q04744, Q80UE7	Gene names	Emx2, Emx-2
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

EMX2_HUMAN
NC score	0.067114 (rank : 107)	θ value	θ > 10 (rank : 138)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	59
SwissProt Accessions	Q04743, Q96NN8, Q9BQF4	Gene names	EMX2
Domain Architecture
Description	Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2).

HXA13_MOUSE
NC score	0.066880 (rank : 108)	θ value	θ > 10 (rank : 158)
Query Neighborhood Hits	109	Target Neighborhood Hits	351	Shared Neighborhood Hits	59
SwissProt Accessions	Q62424	Gene names	Hoxa13, Hox-1.10
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1.10).

NKX28_HUMAN
NC score	0.066860 (rank : 109)	θ value	θ > 10 (rank : 217)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	66
SwissProt Accessions	O15522	Gene names	NKX2-8, NKX-2.8, NKX2G, NKX2H
Domain Architecture
Description	Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H).

HXA6_MOUSE
NC score	0.066676 (rank : 110)	θ value	θ > 10 (rank : 164)
Query Neighborhood Hits	109	Target Neighborhood Hits	304	Shared Neighborhood Hits	48
SwissProt Accessions	P09092, Q9JI98	Gene names	Hoxa6, Hox-1.2, Hoxa-6
Domain Architecture
Description	Homeobox protein Hox-A6 (Hox-1.2) (M5-4).

DLX3_HUMAN
NC score	0.066205 (rank : 111)	θ value	θ > 10 (rank : 126)
Query Neighborhood Hits	109	Target Neighborhood Hits	369	Shared Neighborhood Hits	58
SwissProt Accessions	O60479	Gene names	DLX3
Domain Architecture
Description	Homeobox protein DLX-3.

HXA13_HUMAN
NC score	0.066106 (rank : 112)	θ value	θ > 10 (rank : 157)
Query Neighborhood Hits	109	Target Neighborhood Hits	353	Shared Neighborhood Hits	59
SwissProt Accessions	P31271, O43371	Gene names	HOXA13, HOX1J
Domain Architecture
Description	Homeobox protein Hox-A13 (Hox-1J).

PITX1_HUMAN
NC score	0.066039 (rank : 113)	θ value	θ > 10 (rank : 227)
Query Neighborhood Hits	109	Target Neighborhood Hits	353	Shared Neighborhood Hits	57
SwissProt Accessions	P78337, O14677, O60425, Q9BTI5	Gene names	PITX1, BFT, PTX1
Domain Architecture
Description	Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot).

CUTL1_MOUSE
NC score	0.065351 (rank : 114)	θ value	8.99809 (rank : 98)
Query Neighborhood Hits	109	Target Neighborhood Hits	1620	Shared Neighborhood Hits	61
SwissProt Accessions	P53564, O08994, P70301, Q571L6, Q91ZD2	Gene names	Cutl1, Cux, Cux1, Kiaa4047
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (Homeobox protein Cux).

HXD9_HUMAN
NC score	0.065315 (rank : 115)	θ value	θ > 10 (rank : 202)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	53
SwissProt Accessions	P28356	Gene names	HOXD9, HOX4C
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4C) (Hox-5.2).

HXD9_MOUSE
NC score	0.065023 (rank : 116)	θ value	θ > 10 (rank : 203)
Query Neighborhood Hits	109	Target Neighborhood Hits	359	Shared Neighborhood Hits	53
SwissProt Accessions	P28357, Q3UYS2	Gene names	Hoxd9, Hox-4.4, Hoxd-9
Domain Architecture
Description	Homeobox protein Hox-D9 (Hox-4.4) (Hox-5.2).

ZHX1_MOUSE
NC score	0.064833 (rank : 117)	θ value	θ > 10 (rank : 245)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	46
SwissProt Accessions	P70121, Q8BQ68, Q8C6T4, Q8CJG3	Gene names	Zhx1
Domain Architecture
Description	Zinc fingers and homeoboxes protein 1.

PO6F1_HUMAN
NC score	0.064623 (rank : 118)	θ value	θ > 10 (rank : 233)
Query Neighborhood Hits	109	Target Neighborhood Hits	370	Shared Neighborhood Hits	52
SwissProt Accessions	Q14863	Gene names	POU6F1, BRN5, MPOU, TCFB1
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein).

HLX1_HUMAN
NC score	0.064537 (rank : 119)	θ value	θ > 10 (rank : 146)
Query Neighborhood Hits	109	Target Neighborhood Hits	370	Shared Neighborhood Hits	57
SwissProt Accessions	Q14774, Q15988	Gene names	HLX1
Domain Architecture
Description	Homeobox protein HLX1 (Homeobox protein HB24).

HXB13_MOUSE
NC score	0.064405 (rank : 120)	θ value	θ > 10 (rank : 170)
Query Neighborhood Hits	109	Target Neighborhood Hits	384	Shared Neighborhood Hits	56
SwissProt Accessions	P70321, Q80Y12	Gene names	Hoxb13
Domain Architecture
Description	Homeobox protein Hox-B13.

DUX4_HUMAN
NC score	0.064258 (rank : 121)	θ value	θ > 10 (rank : 135)
Query Neighborhood Hits	109	Target Neighborhood Hits	403	Shared Neighborhood Hits	49
SwissProt Accessions	Q9UBX2	Gene names	DUX4, DUX10
Domain Architecture	No domain graphic available
Description	Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

HXB6_HUMAN
NC score	0.064241 (rank : 122)	θ value	θ > 10 (rank : 175)
Query Neighborhood Hits	109	Target Neighborhood Hits	307	Shared Neighborhood Hits	47
SwissProt Accessions	P17509, P09068, Q9HB11, Q9UGH2	Gene names	HOXB6, HOX2B
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2).

ALX4_MOUSE
NC score	0.064151 (rank : 123)	θ value	θ > 10 (rank : 113)
Query Neighborhood Hits	109	Target Neighborhood Hits	369	Shared Neighborhood Hits	65
SwissProt Accessions	O35137	Gene names	Alx4
Domain Architecture
Description	Homeobox protein aristaless-like 4 (ALX-4).

HXB6_MOUSE
NC score	0.063966 (rank : 124)	θ value	θ > 10 (rank : 176)
Query Neighborhood Hits	109	Target Neighborhood Hits	309	Shared Neighborhood Hits	47
SwissProt Accessions	P09023	Gene names	Hoxb6, Hox-2.2, Hoxb-6
Domain Architecture
Description	Homeobox protein Hox-B6 (Hox-2.2) (Homeobox protein MH-22A).

DLX5_HUMAN
NC score	0.063853 (rank : 125)	θ value	θ > 10 (rank : 130)
Query Neighborhood Hits	109	Target Neighborhood Hits	405	Shared Neighborhood Hits	61
SwissProt Accessions	P56178, Q9UPL1	Gene names	DLX5
Domain Architecture
Description	Homeobox protein DLX-5.

HXD1_MOUSE
NC score	0.063687 (rank : 126)	θ value	θ > 10 (rank : 197)
Query Neighborhood Hits	109	Target Neighborhood Hits	381	Shared Neighborhood Hits	54
SwissProt Accessions	Q01822	Gene names	Hoxd1, Hox-4.9, Hoxd-1
Domain Architecture
Description	Homeobox protein Hox-D1 (Hox-4.9).

HXA7_HUMAN
NC score	0.063668 (rank : 127)	θ value	θ > 10 (rank : 165)
Query Neighborhood Hits	109	Target Neighborhood Hits	309	Shared Neighborhood Hits	46
SwissProt Accessions	P31268, O43368, O43486, O95655, Q9NSC8, Q9UDM1	Gene names	HOXA7, HOX1A
Domain Architecture
Description	Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1).

PAX7_HUMAN
NC score	0.063518 (rank : 128)	θ value	8.99809 (rank : 106)
Query Neighborhood Hits	109	Target Neighborhood Hits	456	Shared Neighborhood Hits	69
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

OTP_MOUSE
NC score	0.063418 (rank : 129)	θ value	θ > 10 (rank : 221)
Query Neighborhood Hits	109	Target Neighborhood Hits	387	Shared Neighborhood Hits	57
SwissProt Accessions	O09113	Gene names	Otp
Domain Architecture
Description	Homeobox protein orthopedia.

HXD13_HUMAN
NC score	0.063253 (rank : 130)	θ value	θ > 10 (rank : 194)
Query Neighborhood Hits	109	Target Neighborhood Hits	332	Shared Neighborhood Hits	55
SwissProt Accessions	P35453	Gene names	HOXD13, HOX4I
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4I).

HXD13_MOUSE
NC score	0.063238 (rank : 131)	θ value	θ > 10 (rank : 195)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	55
SwissProt Accessions	P70217, Q2VPB0, Q2VPB1, Q64177	Gene names	Hoxd13, Hox-4.8
Domain Architecture
Description	Homeobox protein Hox-D13 (Hox-4.8).

PO6F1_MOUSE
NC score	0.063184 (rank : 132)	θ value	θ > 10 (rank : 234)
Query Neighborhood Hits	109	Target Neighborhood Hits	581	Shared Neighborhood Hits	57
SwissProt Accessions	Q07916, Q91XK3	Gene names	Pou6f1, Emb
Domain Architecture
Description	POU domain, class 6, transcription factor 1 (Octamer-binding transcription factor EMB) (Transcription regulatory protein MCP-1).

DLX3_MOUSE
NC score	0.063119 (rank : 133)	θ value	θ > 10 (rank : 127)
Query Neighborhood Hits	109	Target Neighborhood Hits	367	Shared Neighborhood Hits	58
SwissProt Accessions	Q64205	Gene names	Dlx3
Domain Architecture
Description	Homeobox protein DLX-3.

DLX4_MOUSE
NC score	0.063117 (rank : 134)	θ value	θ > 10 (rank : 129)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	55
SwissProt Accessions	P70436, Q3UM51, Q8R4I3	Gene names	Dlx4, Dlx7
Domain Architecture
Description	Homeobox protein DLX-4 (DLX-7).

GSC_HUMAN
NC score	0.063076 (rank : 135)	θ value	θ > 10 (rank : 140)
Query Neighborhood Hits	109	Target Neighborhood Hits	369	Shared Neighborhood Hits	60
SwissProt Accessions	P56915, Q86YR1	Gene names	GSC
Domain Architecture	No domain graphic available
Description	Homeobox protein goosecoid.

HXB9_MOUSE
NC score	0.062795 (rank : 136)	θ value	θ > 10 (rank : 182)
Query Neighborhood Hits	109	Target Neighborhood Hits	344	Shared Neighborhood Hits	48
SwissProt Accessions	P20615	Gene names	Hoxb9, Hox-2.5, Hoxb-9
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2.5).

PAX7_MOUSE
NC score	0.062727 (rank : 137)	θ value	8.99809 (rank : 107)
Query Neighborhood Hits	109	Target Neighborhood Hits	422	Shared Neighborhood Hits	68
SwissProt Accessions	P47239, Q9ES16	Gene names	Pax7, Pax-7
Domain Architecture	No domain graphic available
Description	Paired box protein Pax-7.

HME2_HUMAN
NC score	0.062640 (rank : 138)	θ value	θ > 10 (rank : 152)
Query Neighborhood Hits	109	Target Neighborhood Hits	355	Shared Neighborhood Hits	59
SwissProt Accessions	P19622	Gene names	EN2
Domain Architecture
Description	Homeobox protein engrailed-2 (Hu-En-2).

DUX1_HUMAN
NC score	0.062590 (rank : 139)	θ value	θ > 10 (rank : 133)
Query Neighborhood Hits	109	Target Neighborhood Hits	330	Shared Neighborhood Hits	49
SwissProt Accessions	O43812	Gene names	DUX1
Domain Architecture	No domain graphic available
Description	Double homeobox protein 1.

DUX5_HUMAN
NC score	0.062332 (rank : 140)	θ value	θ > 10 (rank : 136)
Query Neighborhood Hits	109	Target Neighborhood Hits	330	Shared Neighborhood Hits	49
SwissProt Accessions	Q96PT3	Gene names	DUX5
Domain Architecture	No domain graphic available
Description	Double homeobox protein 5.

HME2_MOUSE
NC score	0.062332 (rank : 141)	θ value	θ > 10 (rank : 153)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	59
SwissProt Accessions	P09066	Gene names	En2, En-2
Domain Architecture
Description	Homeobox protein engrailed-2 (Mo-En-2).

CUTL1_HUMAN
NC score	0.062245 (rank : 142)	θ value	θ > 10 (rank : 120)
Query Neighborhood Hits	109	Target Neighborhood Hits	1574	Shared Neighborhood Hits	57
SwissProt Accessions	P39880, Q6NYH4, Q9UEV5	Gene names	CUTL1
Domain Architecture	No domain graphic available
Description	Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP).

GSC_MOUSE
NC score	0.061843 (rank : 143)	θ value	θ > 10 (rank : 141)
Query Neighborhood Hits	109	Target Neighborhood Hits	368	Shared Neighborhood Hits	57
SwissProt Accessions	Q02591	Gene names	Gsc
Domain Architecture
Description	Homeobox protein goosecoid.

HXD1_HUMAN
NC score	0.061412 (rank : 144)	θ value	θ > 10 (rank : 196)
Query Neighborhood Hits	109	Target Neighborhood Hits	337	Shared Neighborhood Hits	53
SwissProt Accessions	Q9GZZ0	Gene names	HOXD1
Domain Architecture
Description	Homeobox protein Hox-D1.

ALX4_HUMAN
NC score	0.061307 (rank : 145)	θ value	θ > 10 (rank : 112)
Query Neighborhood Hits	109	Target Neighborhood Hits	394	Shared Neighborhood Hits	68
SwissProt Accessions	Q9H161, Q96JN7, Q9H198, Q9HAY9	Gene names	ALX4, KIAA1788
Domain Architecture
Description	Homeobox protein aristaless-like 4.

HXB9_HUMAN
NC score	0.061296 (rank : 146)	θ value	θ > 10 (rank : 181)
Query Neighborhood Hits	109	Target Neighborhood Hits	344	Shared Neighborhood Hits	48
SwissProt Accessions	P17482, Q9H1I1	Gene names	HOXB9, HOX2E
Domain Architecture
Description	Homeobox protein Hox-B9 (Hox-2E) (Hox-2.5).

ATBF1_HUMAN
NC score	0.060287 (rank : 147)	θ value	1.06291 (rank : 63)
Query Neighborhood Hits	109	Target Neighborhood Hits	1547	Shared Neighborhood Hits	74
SwissProt Accessions	Q15911, O15101, Q13719	Gene names	ATBF1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

HXB1_MOUSE
NC score	0.060176 (rank : 148)	θ value	θ > 10 (rank : 172)
Query Neighborhood Hits	109	Target Neighborhood Hits	341	Shared Neighborhood Hits	55
SwissProt Accessions	P17919, Q3ZAY6, Q9CYH3	Gene names	Hoxb1, Hox-2.9, Hoxb-1
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2.9).

HXB1_HUMAN
NC score	0.059934 (rank : 149)	θ value	θ > 10 (rank : 171)
Query Neighborhood Hits	109	Target Neighborhood Hits	356	Shared Neighborhood Hits	53
SwissProt Accessions	P14653	Gene names	HOXB1, HOX2I
Domain Architecture
Description	Homeobox protein Hox-B1 (Hox-2I).

PROP1_HUMAN
NC score	0.059890 (rank : 150)	θ value	θ > 10 (rank : 235)
Query Neighborhood Hits	109	Target Neighborhood Hits	354	Shared Neighborhood Hits	61
SwissProt Accessions	O75360	Gene names	PROP1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

ATBF1_MOUSE
NC score	0.059578 (rank : 151)	θ value	1.06291 (rank : 64)
Query Neighborhood Hits	109	Target Neighborhood Hits	1841	Shared Neighborhood Hits	76
SwissProt Accessions	Q61329	Gene names	Atbf1
Domain Architecture
Description	Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1).

PRRXL_MOUSE
NC score	0.059436 (rank : 152)	θ value	θ > 10 (rank : 240)
Query Neighborhood Hits	109	Target Neighborhood Hits	350	Shared Neighborhood Hits	61
SwissProt Accessions	Q8BYH0, Q8K3F8	Gene names	Prrxl1, Drg11
Domain Architecture	No domain graphic available
Description	Paired-related homeobox protein-like 1 (Dorsal root ganglion 11) (Homeobox protein DRG11).

DLX4_HUMAN
NC score	0.059357 (rank : 153)	θ value	θ > 10 (rank : 128)
Query Neighborhood Hits	109	Target Neighborhood Hits	350	Shared Neighborhood Hits	55
SwissProt Accessions	Q92988, O60480, Q13265, Q6PJK0, Q9HBE0	Gene names	DLX4, BP1, DLX7, DLX8
Domain Architecture	No domain graphic available
Description	Homeobox protein DLX-4 (DLX-7) (DLX-8) (Beta protein 1).

BARX2_HUMAN
NC score	0.059349 (rank : 154)	θ value	θ > 10 (rank : 114)
Query Neighborhood Hits	109	Target Neighborhood Hits	387	Shared Neighborhood Hits	53
SwissProt Accessions	Q9UMQ3, O43518	Gene names	BARX2
Domain Architecture
Description	Homeobox protein BarH-like 2.

PROP1_MOUSE
NC score	0.059156 (rank : 155)	θ value	θ > 10 (rank : 236)
Query Neighborhood Hits	109	Target Neighborhood Hits	361	Shared Neighborhood Hits	65
SwissProt Accessions	P97458	Gene names	Prop1, Prop-1
Domain Architecture
Description	Homeobox protein prophet of Pit-1 (PROP-1) (Pituitary-specific homeodomain factor).

PAX3_HUMAN
NC score	0.059076 (rank : 156)	θ value	8.99809 (rank : 104)
Query Neighborhood Hits	109	Target Neighborhood Hits	513	Shared Neighborhood Hits	58
SwissProt Accessions	P23760, Q16448	Gene names	PAX3, HUP2
Domain Architecture
Description	Paired box protein Pax-3 (HUP2).

HLX1_MOUSE
NC score	0.059030 (rank : 157)	θ value	θ > 10 (rank : 147)
Query Neighborhood Hits	109	Target Neighborhood Hits	362	Shared Neighborhood Hits	55
SwissProt Accessions	Q61670	Gene names	Hlx1, Hlx
Domain Architecture
Description	Homeobox protein HLX1.

LHX2_MOUSE
NC score	0.058700 (rank : 158)	θ value	θ > 10 (rank : 207)
Query Neighborhood Hits	109	Target Neighborhood Hits	431	Shared Neighborhood Hits	56
SwissProt Accessions	Q9Z0S2	Gene names	Lhx2
Domain Architecture
Description	LIM/homeobox protein Lhx2.

NKX24_HUMAN
NC score	0.058586 (rank : 159)	θ value	θ > 10 (rank : 214)
Query Neighborhood Hits	109	Target Neighborhood Hits	366	Shared Neighborhood Hits	51
SwissProt Accessions	Q9H2Z4	Gene names	NKX2-4, NKX2D
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

LHX2_HUMAN
NC score	0.058039 (rank : 160)	θ value	θ > 10 (rank : 206)
Query Neighborhood Hits	109	Target Neighborhood Hits	432	Shared Neighborhood Hits	57
SwissProt Accessions	P50458, O95860, Q8N1Z3	Gene names	LHX2, LH2
Domain Architecture
Description	LIM/homeobox protein Lhx2 (Homeobox protein LH-2).

HXC13_HUMAN
NC score	0.057941 (rank : 161)	θ value	θ > 10 (rank : 183)
Query Neighborhood Hits	109	Target Neighborhood Hits	336	Shared Neighborhood Hits	56
SwissProt Accessions	P31276, Q96J32, Q9NR24, Q9NYD5	Gene names	HOXC13, HOX3G
Domain Architecture
Description	Homeobox protein Hox-C13 (Hox-3G).

HXC13_MOUSE
NC score	0.057882 (rank : 162)	θ value	θ > 10 (rank : 184)
Query Neighborhood Hits	109	Target Neighborhood Hits	337	Shared Neighborhood Hits	55
SwissProt Accessions	P50207, Q53Z78, Q920I7	Gene names	Hoxc13, Hoxc-13
Domain Architecture
Description	Homeobox protein Hox-C13.

HXA11_MOUSE
NC score	0.057826 (rank : 163)	θ value	θ > 10 (rank : 156)
Query Neighborhood Hits	109	Target Neighborhood Hits	327	Shared Neighborhood Hits	39
SwissProt Accessions	P31311, Q3V026	Gene names	Hoxa11, Hox-1.9, Hoxa-11
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1.9).

PAX3_MOUSE
NC score	0.057784 (rank : 164)	θ value	8.99809 (rank : 105)
Query Neighborhood Hits	109	Target Neighborhood Hits	478	Shared Neighborhood Hits	57
SwissProt Accessions	P24610, Q3UFQ9, Q8BRE7, Q9CXI6	Gene names	Pax3, Pax-3
Domain Architecture
Description	Paired box protein Pax-3.

DLX2_HUMAN
NC score	0.057333 (rank : 165)	θ value	θ > 10 (rank : 124)
Query Neighborhood Hits	109	Target Neighborhood Hits	355	Shared Neighborhood Hits	57
SwissProt Accessions	Q07687	Gene names	DLX2
Domain Architecture
Description	Homeobox protein DLX-2.

DLX2_MOUSE
NC score	0.057218 (rank : 166)	θ value	θ > 10 (rank : 125)
Query Neighborhood Hits	109	Target Neighborhood Hits	352	Shared Neighborhood Hits	56
SwissProt Accessions	P40764	Gene names	Dlx2, Tes-1, Tes1
Domain Architecture
Description	Homeobox protein DLX-2 (Homeobox protein TES-1).

HXC6_HUMAN
NC score	0.056683 (rank : 167)	θ value	θ > 10 (rank : 187)
Query Neighborhood Hits	109	Target Neighborhood Hits	306	Shared Neighborhood Hits	48
SwissProt Accessions	P09630	Gene names	HOXC6, HOX3C
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25).

HXC6_MOUSE
NC score	0.056683 (rank : 168)	θ value	θ > 10 (rank : 188)
Query Neighborhood Hits	109	Target Neighborhood Hits	306	Shared Neighborhood Hits	48
SwissProt Accessions	P10629, Q61683	Gene names	Hoxc6, Hox-3.3, Hoxc-6
Domain Architecture
Description	Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1).

GSH2_MOUSE
NC score	0.056579 (rank : 169)	θ value	θ > 10 (rank : 143)
Query Neighborhood Hits	109	Target Neighborhood Hits	319	Shared Neighborhood Hits	50
SwissProt Accessions	P31316	Gene names	Gsh2, Gsh-2
Domain Architecture
Description	Homeobox protein GSH-2.

HXA11_HUMAN
NC score	0.056465 (rank : 170)	θ value	θ > 10 (rank : 155)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	39
SwissProt Accessions	P31270	Gene names	HOXA11, HOX1I
Domain Architecture
Description	Homeobox protein Hox-A11 (Hox-1I).

LHX9_HUMAN
NC score	0.056195 (rank : 171)	θ value	θ > 10 (rank : 209)
Query Neighborhood Hits	109	Target Neighborhood Hits	444	Shared Neighborhood Hits	54
SwissProt Accessions	Q9NQ69, Q5VUE3, Q9BYU6, Q9NQ70	Gene names	LHX9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

DUX3_HUMAN
NC score	0.056194 (rank : 172)	θ value	θ > 10 (rank : 134)
Query Neighborhood Hits	109	Target Neighborhood Hits	312	Shared Neighborhood Hits	49
SwissProt Accessions	Q96PT4, Q9UND2	Gene names	DUX3
Domain Architecture	No domain graphic available
Description	Putative double homeobox protein 3.

BARX2_MOUSE
NC score	0.056167 (rank : 173)	θ value	θ > 10 (rank : 115)
Query Neighborhood Hits	109	Target Neighborhood Hits	335	Shared Neighborhood Hits	52
SwissProt Accessions	O08686	Gene names	Barx2
Domain Architecture
Description	Homeobox protein BarH-like 2.

HME1_HUMAN
NC score	0.056128 (rank : 174)	θ value	θ > 10 (rank : 150)
Query Neighborhood Hits	109	Target Neighborhood Hits	384	Shared Neighborhood Hits	52
SwissProt Accessions	Q05925	Gene names	EN1
Domain Architecture
Description	Homeobox protein engrailed-1 (Hu-En-1).

HME1_MOUSE
NC score	0.056015 (rank : 175)	θ value	θ > 10 (rank : 151)
Query Neighborhood Hits	109	Target Neighborhood Hits	397	Shared Neighborhood Hits	53
SwissProt Accessions	P09065	Gene names	En1, En-1
Domain Architecture
Description	Homeobox protein engrailed-1 (Mo-En-1).

HXA4_MOUSE
NC score	0.055996 (rank : 176)	θ value	1.81305 (rank : 70)
Query Neighborhood Hits	109	Target Neighborhood Hits	379	Shared Neighborhood Hits	51
SwissProt Accessions	P06798, Q61684, Q64388, Q8BPE6	Gene names	Hoxa4, Hox-1.4, Hoxa-4
Domain Architecture
Description	Homeobox protein Hox-A4 (Hox-1.4) (Homeobox protein MH-3).

HXD3_MOUSE
NC score	0.055867 (rank : 177)	θ value	θ > 10 (rank : 199)
Query Neighborhood Hits	109	Target Neighborhood Hits	435	Shared Neighborhood Hits	55
SwissProt Accessions	P09027, Q3UUD3	Gene names	Hoxd3, Hox-4.1, Hoxd-3
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4.1) (Homeobox protein MH-19).

NKX12_MOUSE
NC score	0.055352 (rank : 178)	θ value	θ > 10 (rank : 213)
Query Neighborhood Hits	109	Target Neighborhood Hits	332	Shared Neighborhood Hits	45
SwissProt Accessions	P42580, Q9JHF2, Q9JKW5, Q9JKW6, Q9JKW9, Q9JKX0, Q9JKX1	Gene names	Nkx1-2, Nkx1.1, Sax1
Domain Architecture
Description	NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1).

GSH2_HUMAN
NC score	0.055337 (rank : 179)	θ value	θ > 10 (rank : 142)
Query Neighborhood Hits	109	Target Neighborhood Hits	324	Shared Neighborhood Hits	50
SwissProt Accessions	Q9BZM3	Gene names	GSH2
Domain Architecture
Description	Homeobox protein GSH-2.

IPF1_MOUSE
NC score	0.054996 (rank : 180)	θ value	θ > 10 (rank : 205)
Query Neighborhood Hits	109	Target Neighborhood Hits	340	Shared Neighborhood Hits	50
SwissProt Accessions	P52946	Gene names	Ipf1, Pdx1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1).

HLXB9_HUMAN
NC score	0.054716 (rank : 181)	θ value	θ > 10 (rank : 148)
Query Neighborhood Hits	109	Target Neighborhood Hits	336	Shared Neighborhood Hits	54
SwissProt Accessions	P50219, Q9Y648	Gene names	HLXB9
Domain Architecture
Description	Homeobox protein HB9.

LHX9_MOUSE
NC score	0.054670 (rank : 182)	θ value	θ > 10 (rank : 210)
Query Neighborhood Hits	109	Target Neighborhood Hits	445	Shared Neighborhood Hits	54
SwissProt Accessions	Q9WUH2, Q9QYQ5, Q9QYQ6, Q9QZ00, Q9WU44	Gene names	Lhx9
Domain Architecture
Description	LIM/homeobox protein Lhx9.

HESX1_MOUSE
NC score	0.054462 (rank : 183)	θ value	θ > 10 (rank : 144)
Query Neighborhood Hits	109	Target Neighborhood Hits	331	Shared Neighborhood Hits	46
SwissProt Accessions	Q61658, Q61047	Gene names	Hesx1, Hes-1, Rpx
Domain Architecture
Description	Homeobox expressed in ES cells 1 (Homeobox protein ANF) (Anterior- restricted homeobox protein) (Rathke pouch homeo box).

TITF1_HUMAN
NC score	0.054376 (rank : 184)	θ value	θ > 10 (rank : 241)
Query Neighborhood Hits	109	Target Neighborhood Hits	332	Shared Neighborhood Hits	47
SwissProt Accessions	P43699, O14954, O14955, Q9BRJ8	Gene names	TITF1, NKX2-1, NKX2A, TTF1
Domain Architecture
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1) (Homeobox protein NK-2 homolog A).

PAX4_HUMAN
NC score	0.053910 (rank : 185)	θ value	θ > 10 (rank : 222)
Query Neighborhood Hits	109	Target Neighborhood Hits	367	Shared Neighborhood Hits	56
SwissProt Accessions	O43316, O95161, Q6B0H0	Gene names	PAX4
Domain Architecture
Description	Paired box protein Pax-4.

IPF1_HUMAN
NC score	0.053894 (rank : 186)	θ value	θ > 10 (rank : 204)
Query Neighborhood Hits	109	Target Neighborhood Hits	330	Shared Neighborhood Hits	49
SwissProt Accessions	P52945, O60594	Gene names	IPF1, PDX1
Domain Architecture
Description	Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum homeobox 1) (PDX- 1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose- sensitive factor) (GSF).

HXA3_MOUSE
NC score	0.053857 (rank : 187)	θ value	θ > 10 (rank : 162)
Query Neighborhood Hits	109	Target Neighborhood Hits	558	Shared Neighborhood Hits	65
SwissProt Accessions	P02831, Q4V9Z8, Q61197	Gene names	Hoxa3, Hox-1.5, Hoxa-3
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1.5) (MO-10).

NKX25_HUMAN
NC score	0.053781 (rank : 188)	θ value	θ > 10 (rank : 216)
Query Neighborhood Hits	109	Target Neighborhood Hits	338	Shared Neighborhood Hits	56
SwissProt Accessions	P52952	Gene names	NKX2-5, CSX, NKX2.5, NKX2E
Domain Architecture
Description	Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac- specific homeobox) (Homeobox protein CSX).

TLX3_MOUSE
NC score	0.053448 (rank : 189)	θ value	θ > 10 (rank : 243)
Query Neighborhood Hits	109	Target Neighborhood Hits	346	Shared Neighborhood Hits	54
SwissProt Accessions	O55144	Gene names	Tlx3, Hox11l2, Rnx, Tlx1l2
Domain Architecture
Description	T-cell leukemia homeobox protein 3 (Homeobox TLX-3) (Homeobox protein Hox-11L2) (Respiratory neuron homeobox protein).

EMX1_HUMAN
NC score	0.053205 (rank : 190)	θ value	θ > 10 (rank : 137)
Query Neighborhood Hits	109	Target Neighborhood Hits	336	Shared Neighborhood Hits	57
SwissProt Accessions	Q04741, Q86XB0	Gene names	EMX1
Domain Architecture	No domain graphic available
Description	Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty spiracles- like protein 1).

TITF1_MOUSE
NC score	0.053114 (rank : 191)	θ value	θ > 10 (rank : 242)
Query Neighborhood Hits	109	Target Neighborhood Hits	335	Shared Neighborhood Hits	47
SwissProt Accessions	P50220	Gene names	Titf1, Nkx-2.1, Nkx2-1, Ttf1
Domain Architecture	No domain graphic available
Description	Thyroid transcription factor 1 (Thyroid nuclear factor 1) (TTF-1) (Homeobox protein Nkx-2.1).

HXA3_HUMAN
NC score	0.052878 (rank : 192)	θ value	θ > 10 (rank : 161)
Query Neighborhood Hits	109	Target Neighborhood Hits	535	Shared Neighborhood Hits	64
SwissProt Accessions	O43365	Gene names	HOXA3, HOX1E
Domain Architecture
Description	Homeobox protein Hox-A3 (Hox-1E).

HHEX_HUMAN
NC score	0.052456 (rank : 193)	θ value	θ > 10 (rank : 145)
Query Neighborhood Hits	109	Target Neighborhood Hits	358	Shared Neighborhood Hits	46
SwissProt Accessions	Q03014	Gene names	HHEX, HEX, PRH, PRHX
Domain Architecture
Description	Homeobox protein PRH (Hematopoietically expressed homeobox) (Homeobox protein HEX).

PEPP1_HUMAN
NC score	0.052209 (rank : 194)	θ value	θ > 10 (rank : 224)
Query Neighborhood Hits	109	Target Neighborhood Hits	338	Shared Neighborhood Hits	47
SwissProt Accessions	Q8NHV9, O95030, Q3SYE0	Gene names	PEPP1, OTEX
Domain Architecture
Description	Paired-like homeobox protein PEPP-1 (Ovary-, testis- and epididymis- expressed gene protein).

HLXB9_MOUSE
NC score	0.052124 (rank : 195)	θ value	θ > 10 (rank : 149)
Query Neighborhood Hits	109	Target Neighborhood Hits	354	Shared Neighborhood Hits	57
SwissProt Accessions	Q9QZW9	Gene names	Hlxb9
Domain Architecture
Description	Homeobox protein HB9.

MSX2_HUMAN
NC score	0.051917 (rank : 196)	θ value	θ > 10 (rank : 211)
Query Neighborhood Hits	109	Target Neighborhood Hits	337	Shared Neighborhood Hits	53
SwissProt Accessions	P35548	Gene names	MSX2, HOX8
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8).

HMX2_MOUSE
NC score	0.051883 (rank : 197)	θ value	θ > 10 (rank : 154)
Query Neighborhood Hits	109	Target Neighborhood Hits	354	Shared Neighborhood Hits	55
SwissProt Accessions	P43687, Q8R1Q2	Gene names	Hmx2, Nkx-5.2, Nkx5-2
Domain Architecture
Description	Homeobox protein HMX2 (Homeobox protein Nkx-5.2).

HXD3_HUMAN
NC score	0.051769 (rank : 198)	θ value	θ > 10 (rank : 198)
Query Neighborhood Hits	109	Target Neighborhood Hits	433	Shared Neighborhood Hits	53
SwissProt Accessions	P31249, Q99955, Q9BSC5	Gene names	HOXD3, HOX4A
Domain Architecture
Description	Homeobox protein Hox-D3 (Hox-4A).

CDX4_MOUSE
NC score	0.051749 (rank : 199)	θ value	θ > 10 (rank : 119)
Query Neighborhood Hits	109	Target Neighborhood Hits	378	Shared Neighborhood Hits	57
SwissProt Accessions	Q07424	Gene names	Cdx4, Cdx-4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

DBX1_MOUSE
NC score	0.051743 (rank : 200)	θ value	θ > 10 (rank : 121)
Query Neighborhood Hits	109	Target Neighborhood Hits	346	Shared Neighborhood Hits	48
SwissProt Accessions	P52950	Gene names	Dbx1, Dbx
Domain Architecture
Description	Homeobox protein DBX1.

PRRX1_HUMAN
NC score	0.051613 (rank : 201)	θ value	θ > 10 (rank : 237)
Query Neighborhood Hits	109	Target Neighborhood Hits	347	Shared Neighborhood Hits	55
SwissProt Accessions	P54821, O60807	Gene names	PRRX1, PMX1
Domain Architecture
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein PHOX1).

HXB4_HUMAN
NC score	0.051600 (rank : 202)	θ value	θ > 10 (rank : 173)
Query Neighborhood Hits	109	Target Neighborhood Hits	376	Shared Neighborhood Hits	50
SwissProt Accessions	P17483, Q9NTA0	Gene names	HOXB4, HOX2F
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6).

HXC4_MOUSE
NC score	0.051581 (rank : 203)	θ value	θ > 10 (rank : 186)
Query Neighborhood Hits	109	Target Neighborhood Hits	365	Shared Neighborhood Hits	50
SwissProt Accessions	Q08624	Gene names	Hoxc4, Hox-3.5, Hoxc-4
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3.5).

PAX4_MOUSE
NC score	0.051115 (rank : 204)	θ value	θ > 10 (rank : 223)
Query Neighborhood Hits	109	Target Neighborhood Hits	370	Shared Neighborhood Hits	54
SwissProt Accessions	P32115, P97341, Q9QUR1, Q9R091	Gene names	Pax4, Pax-4
Domain Architecture
Description	Paired box protein Pax-4.

HXD12_HUMAN
NC score	0.051113 (rank : 205)	θ value	θ > 10 (rank : 193)
Query Neighborhood Hits	109	Target Neighborhood Hits	334	Shared Neighborhood Hits	41
SwissProt Accessions	P35452, Q9NS03	Gene names	HOXD12, HOX4H
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4H).

CDX1_MOUSE
NC score	0.050891 (rank : 206)	θ value	θ > 10 (rank : 117)
Query Neighborhood Hits	109	Target Neighborhood Hits	379	Shared Neighborhood Hits	45
SwissProt Accessions	P18111, Q8VCF7	Gene names	Cdx1, Cdx-1
Domain Architecture
Description	Homeobox protein CDX-1 (Caudal-type homeobox protein 1).

MEOX1_HUMAN
NC score	0.050860 (rank : 207)	θ value	0.62314 (rank : 61)
Query Neighborhood Hits	109	Target Neighborhood Hits	342	Shared Neighborhood Hits	44
SwissProt Accessions	P50221	Gene names	MEOX1, MOX1
Domain Architecture
Description	Homeobox protein MOX-1 (Mesenchyme homeobox 1).

NKX24_MOUSE
NC score	0.050805 (rank : 208)	θ value	θ > 10 (rank : 215)
Query Neighborhood Hits	109	Target Neighborhood Hits	356	Shared Neighborhood Hits	48
SwissProt Accessions	Q9EQM3, Q9EQM4	Gene names	Nkx2-4, Nkx2d
Domain Architecture
Description	Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D).

CDX4_HUMAN
NC score	0.050743 (rank : 209)	θ value	θ > 10 (rank : 118)
Query Neighborhood Hits	109	Target Neighborhood Hits	366	Shared Neighborhood Hits	55
SwissProt Accessions	O14627, Q5JS20	Gene names	CDX4
Domain Architecture
Description	Homeobox protein CDX-4 (Caudal-type homeobox protein 4).

HXC4_HUMAN
NC score	0.050662 (rank : 210)	θ value	θ > 10 (rank : 185)
Query Neighborhood Hits	109	Target Neighborhood Hits	361	Shared Neighborhood Hits	51
SwissProt Accessions	P09017	Gene names	HOXC4, HOX3E
Domain Architecture
Description	Homeobox protein Hox-C4 (Hox-3E) (CP19).

PRRX1_MOUSE
NC score	0.050371 (rank : 211)	θ value	θ > 10 (rank : 238)
Query Neighborhood Hits	109	Target Neighborhood Hits	346	Shared Neighborhood Hits	53
SwissProt Accessions	P63013, P43271, Q02810	Gene names	Prrx1, Pmx, Pmx1
Domain Architecture	No domain graphic available
Description	Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (Homeobox protein mHox) (Homeobox protein K-2).

MSX2_MOUSE
NC score	0.050261 (rank : 212)	θ value	θ > 10 (rank : 212)
Query Neighborhood Hits	109	Target Neighborhood Hits	345	Shared Neighborhood Hits	53
SwissProt Accessions	Q03358, Q63856	Gene names	Msx2, Hox-8.1, Msx-2
Domain Architecture
Description	Homeobox protein MSX-2 (Hox-8.1).

PHX2B_HUMAN
NC score	0.050260 (rank : 213)	θ value	θ > 10 (rank : 225)
Query Neighborhood Hits	109	Target Neighborhood Hits	407	Shared Neighborhood Hits	52
SwissProt Accessions	Q99453, Q6PJD9	Gene names	PHOX2B, PMX2B
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

PHX2B_MOUSE
NC score	0.050260 (rank : 214)	θ value	θ > 10 (rank : 226)
Query Neighborhood Hits	109	Target Neighborhood Hits	407	Shared Neighborhood Hits	52
SwissProt Accessions	O35690	Gene names	Phox2b, Pmx2b
Domain Architecture
Description	Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox) (NBPhox).

LHX4_MOUSE
NC score	0.050187 (rank : 215)	θ value	θ > 10 (rank : 208)
Query Neighborhood Hits	109	Target Neighborhood Hits	457	Shared Neighborhood Hits	62
SwissProt Accessions	P53776, O08916, Q9R280	Gene names	Lhx4, Gsh-4, Gsh4
Domain Architecture
Description	LIM/homeobox protein Lhx4.

PRRX2_MOUSE
NC score	0.050154 (rank : 216)	θ value	θ > 10 (rank : 239)
Query Neighborhood Hits	109	Target Neighborhood Hits	351	Shared Neighborhood Hits	53
SwissProt Accessions	Q06348, Q61651	Gene names	Prrx2, Prx2, S8
Domain Architecture
Description	Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox protein S8).

HXB4_MOUSE
NC score	0.050072 (rank : 217)	θ value	θ > 10 (rank : 174)
Query Neighborhood Hits	109	Target Neighborhood Hits	375	Shared Neighborhood Hits	49
SwissProt Accessions	P10284, Q3UZB4, Q4VBG0	Gene names	Hoxb4, Hox-2.6, Hoxb-4
Domain Architecture
Description	Homeobox protein Hox-B4 (Hox-2.6).

NKX31_MOUSE
NC score	0.042002 (rank : 218)	θ value	8.99809 (rank : 103)
Query Neighborhood Hits	109	Target Neighborhood Hits	379	Shared Neighborhood Hits	43
SwissProt Accessions	P97436, O09087	Gene names	Nkx3-1, Nkx-3.1, Nkx3a
Domain Architecture
Description	Homeobox protein Nkx-3.1.

ZN750_MOUSE
NC score	0.035224 (rank : 219)	θ value	0.47712 (rank : 57)
Query Neighborhood Hits	109	Target Neighborhood Hits	346	Shared Neighborhood Hits	13
SwissProt Accessions	Q8BH05, Q66JP3, Q8C0L1	Gene names	Znf750
Domain Architecture	No domain graphic available
Description	Protein ZNF750.

LASS2_HUMAN
NC score	0.032995 (rank : 220)	θ value	2.36792 (rank : 74)
Query Neighborhood Hits	109	Target Neighborhood Hits	47	Shared Neighborhood Hits	18
SwissProt Accessions	Q96G23, Q9HD96, Q9NW79	Gene names	LASS2, TMSG1
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 2 (Tumor metastasis-suppressor gene 1 protein) (SP260).

LASS2_MOUSE
NC score	0.031091 (rank : 221)	θ value	2.36792 (rank : 75)
Query Neighborhood Hits	109	Target Neighborhood Hits	51	Shared Neighborhood Hits	18
SwissProt Accessions	Q924Z4, Q3TXC5, Q9DCN6	Gene names	Lass2, Trh3
Domain Architecture	No domain graphic available
Description	LAG1 longevity assurance homolog 2 (Translocating chain-associating membrane protein homolog 3) (TRAM homolog 3).

GAK5_HUMAN
NC score	0.029147 (rank : 222)	θ value	3.0926 (rank : 85)
Query Neighborhood Hits	109	Target Neighborhood Hits	429	Shared Neighborhood Hits	16
SwissProt Accessions	P62684	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_19p13.11 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K113 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK12_HUMAN
NC score	0.028891 (rank : 223)	θ value	3.0926 (rank : 81)
Query Neighborhood Hits	109	Target Neighborhood Hits	374	Shared Neighborhood Hits	15
SwissProt Accessions	P63130, Q9UKI0	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_1q22 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K102 Gag protein) (HERV-K(III) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK1_HUMAN
NC score	0.028617 (rank : 224)	θ value	3.0926 (rank : 82)
Query Neighborhood Hits	109	Target Neighborhood Hits	268	Shared Neighborhood Hits	10
SwissProt Accessions	P62683	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_12q14.1 provirus ancestral Gag polyprotein (Gag polyprotein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK2_HUMAN
NC score	0.028551 (rank : 225)	θ value	3.0926 (rank : 83)
Query Neighborhood Hits	109	Target Neighborhood Hits	406	Shared Neighborhood Hits	14
SwissProt Accessions	Q7LDI9, Q9UKH5, Q9Y6I1, Q9YNA6, Q9YNB0	Gene names	ERVK6
Domain Architecture	No domain graphic available
Description	HERV-K_7p22.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(HML-2.HOM) Gag protein) (HERV-K108 Gag protein) (HERV-K(C7) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK4_HUMAN
NC score	0.028526 (rank : 226)	θ value	3.0926 (rank : 84)
Query Neighborhood Hits	109	Target Neighborhood Hits	415	Shared Neighborhood Hits	14
SwissProt Accessions	P63126, Q9UKH4	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_6q14.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K109 Gag protein) (HERV-K(C6) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK11_HUMAN
NC score	0.028507 (rank : 227)	θ value	3.0926 (rank : 80)
Query Neighborhood Hits	109	Target Neighborhood Hits	409	Shared Neighborhood Hits	14
SwissProt Accessions	P63145, Q9UKI1	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_22q11.21 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K101 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

GAK6_HUMAN
NC score	0.027135 (rank : 228)	θ value	8.99809 (rank : 99)
Query Neighborhood Hits	109	Target Neighborhood Hits	392	Shared Neighborhood Hits	16
SwissProt Accessions	P62685	Gene names
Domain Architecture	No domain graphic available
Description	HERV-K_8p23.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K115 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].

AUTS2_HUMAN
NC score	0.025701 (rank : 229)	θ value	8.99809 (rank : 97)
Query Neighborhood Hits	109	Target Neighborhood Hits	342	Shared Neighborhood Hits	16
SwissProt Accessions	Q8WXX7, Q9Y4F2	Gene names	AUTS2, KIAA0442
Domain Architecture	No domain graphic available
Description	Autism susceptibility gene 2 protein.

TMEM5_HUMAN
NC score	0.022655 (rank : 230)	θ value	4.03905 (rank : 90)
Query Neighborhood Hits	109	Target Neighborhood Hits	8	Shared Neighborhood Hits	3
SwissProt Accessions	Q9Y2B1, Q6PKD6	Gene names	TMEM5
Domain Architecture	No domain graphic available
Description	Transmembrane protein 5.

TARA_HUMAN
NC score	0.020741 (rank : 231)	θ value	0.47712 (rank : 56)
Query Neighborhood Hits	109	Target Neighborhood Hits	1626	Shared Neighborhood Hits	21
SwissProt Accessions	Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4	Gene names	TRIOBP, KIAA1662, TARA
Domain Architecture
Description	TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

MUC7_HUMAN
NC score	0.020093 (rank : 232)	θ value	1.81305 (rank : 71)
Query Neighborhood Hits	109	Target Neighborhood Hits	538	Shared Neighborhood Hits	14
SwissProt Accessions	Q8TAX7	Gene names	MUC7, MG2
Domain Architecture	No domain graphic available
Description	Mucin-7 precursor (MUC-7) (Salivary mucin-7) (Apo-MG2).

FXL19_HUMAN
NC score	0.019782 (rank : 233)	θ value	3.0926 (rank : 79)
Query Neighborhood Hits	109	Target Neighborhood Hits	147	Shared Neighborhood Hits	5
SwissProt Accessions	Q6PCT2, Q8N789, Q9NT14	Gene names	FBXL19, FBL19
Domain Architecture	No domain graphic available
Description	F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat protein 19).

FXL19_MOUSE
NC score	0.019298 (rank : 234)	θ value	2.36792 (rank : 72)
Query Neighborhood Hits	109	Target Neighborhood Hits	217	Shared Neighborhood Hits	4
SwissProt Accessions	Q6PB97, Q7TSH0, Q8BIB4	Gene names	Fbxl19
Domain Architecture	No domain graphic available
Description	F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat protein 19).

PRG4_HUMAN
NC score	0.017291 (rank : 235)	θ value	8.99809 (rank : 108)
Query Neighborhood Hits	109	Target Neighborhood Hits	764	Shared Neighborhood Hits	23
SwissProt Accessions	Q92954, Q6DNC4, Q6DNC5, Q6ZMZ5, Q9BX49	Gene names	PRG4, MSF, SZP
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

SETX_HUMAN
NC score	0.016399 (rank : 236)	θ value	2.36792 (rank : 78)
Query Neighborhood Hits	109	Target Neighborhood Hits	368	Shared Neighborhood Hits	5
SwissProt Accessions	Q7Z333, O75120, Q3KQX4, Q68DW5, Q6AZD7, Q7Z3J6, Q8WX33, Q9H9D1, Q9NVP9	Gene names	SETX, ALS4, KIAA0625, SCAR1
Domain Architecture
Description	Probable helicase senataxin (EC 3.6.1.-) (SEN1 homolog).

SRBP1_MOUSE
NC score	0.015069 (rank : 237)	θ value	4.03905 (rank : 89)
Query Neighborhood Hits	109	Target Neighborhood Hits	384	Shared Neighborhood Hits	10
SwissProt Accessions	Q9WTN3	Gene names	Srebf1, Srebp1
Domain Architecture
Description	Sterol regulatory element-binding protein 1 (SREBP-1) (Sterol regulatory element-binding transcription factor 1).

ALEX_HUMAN
NC score	0.014628 (rank : 238)	θ value	8.99809 (rank : 96)
Query Neighborhood Hits	109	Target Neighborhood Hits	361	Shared Neighborhood Hits	17
SwissProt Accessions	P84996	Gene names	GNAS, GNAS1
Domain Architecture	No domain graphic available
Description	Protein ALEX (Alternative gene product encoded by XL-exon).

SNPC4_MOUSE
NC score	0.014479 (rank : 239)	θ value	5.27518 (rank : 92)
Query Neighborhood Hits	109	Target Neighborhood Hits	237	Shared Neighborhood Hits	8
SwissProt Accessions	Q8BP86, Q6PGG7, Q80UG9, Q810L1	Gene names	Snapc4
Domain Architecture	No domain graphic available
Description	snRNA-activating protein complex subunit 4 (SNAPc subunit 4) (snRNA- activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit).

TIM44_MOUSE
NC score	0.010886 (rank : 240)	θ value	8.99809 (rank : 109)
Query Neighborhood Hits	109	Target Neighborhood Hits	235	Shared Neighborhood Hits	3
SwissProt Accessions	O35857	Gene names	Timm44, Mimt44, Tim44
Domain Architecture
Description	Import inner membrane translocase subunit TIM44, mitochondrial precursor.

IL3B2_MOUSE
NC score	0.010359 (rank : 241)	θ value	8.99809 (rank : 100)
Query Neighborhood Hits	109	Target Neighborhood Hits	372	Shared Neighborhood Hits	10
SwissProt Accessions	P26954	Gene names	Csf2rb2, Ai2ca, Il3r, Il3rb2
Domain Architecture
Description	Interleukin-3 receptor class 2 beta chain precursor (Interleukin-3 receptor class II beta chain) (Colony-stimulating factor 2 receptor, beta 2 chain).

PRG4_MOUSE
NC score	0.009844 (rank : 242)	θ value	6.88961 (rank : 95)
Query Neighborhood Hits	109	Target Neighborhood Hits	624	Shared Neighborhood Hits	12
SwissProt Accessions	Q9JM99, Q3UEL1, Q3V198	Gene names	Prg4, Msf, Szp
Domain Architecture	No domain graphic available
Description	Proteoglycan-4 precursor (Lubricin) (Megakaryocyte-stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part].

PHF8_HUMAN
NC score	0.009022 (rank : 243)	θ value	4.03905 (rank : 88)
Query Neighborhood Hits	109	Target Neighborhood Hits	105	Shared Neighborhood Hits	4
SwissProt Accessions	Q9UPP1, Q5H9U5, Q5VUJ4, Q7Z6D4, Q9HAH2	Gene names	PHF8, KIAA1111, ZNF422
Domain Architecture	No domain graphic available
Description	PHD finger protein 8.

BCOR_HUMAN
NC score	0.006823 (rank : 244)	θ value	4.03905 (rank : 87)
Query Neighborhood Hits	109	Target Neighborhood Hits	609	Shared Neighborhood Hits	10
SwissProt Accessions	Q6W2J9, Q6P4B6, Q7Z2K7, Q8TEB4, Q96DB3, Q9H232, Q9H233, Q9HCJ7, Q9NXF2	Gene names	BCOR, KIAA1575
Domain Architecture	No domain graphic available
Description	BCoR protein (BCL-6 corepressor).

IRF7_MOUSE
NC score	0.006768 (rank : 245)	θ value	8.99809 (rank : 101)
Query Neighborhood Hits	109	Target Neighborhood Hits	34	Shared Neighborhood Hits	4
SwissProt Accessions	P70434	Gene names	Irf7
Domain Architecture
Description	Interferon regulatory factor 7 (IRF-7).

IRS1_HUMAN
NC score	0.006765 (rank : 246)	θ value	8.99809 (rank : 102)
Query Neighborhood Hits	109	Target Neighborhood Hits	109	Shared Neighborhood Hits	2
SwissProt Accessions	P35568	Gene names	IRS1
Domain Architecture
Description	Insulin receptor substrate 1 (IRS-1).

ANR25_MOUSE
NC score	0.004460 (rank : 247)	θ value	6.88961 (rank : 93)
Query Neighborhood Hits	109	Target Neighborhood Hits	398	Shared Neighborhood Hits	7
SwissProt Accessions	Q8BX02, Q8BLD5, Q91Z35	Gene names	Ankrd25
Domain Architecture	No domain graphic available
Description	Ankyrin repeat domain-containing protein 25.

KCNH2_HUMAN
NC score	0.004251 (rank : 248)	θ value	6.88961 (rank : 94)
Query Neighborhood Hits	109	Target Neighborhood Hits	158	Shared Neighborhood Hits	3
SwissProt Accessions	Q12809, O75418, O75680, Q9BT72, Q9BUT7, Q9H3P0	Gene names	KCNH2, ERG, ERG1, HERG, HERG1
Domain Architecture
Description	Potassium voltage-gated channel subfamily H member 2 (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (H-ERG) (Erg1) (Ether-a-go-go-related protein 1) (Eag-related protein 1) (eag homolog).

WNK2_HUMAN
NC score	0.001076 (rank : 249)	θ value	1.38821 (rank : 69)
Query Neighborhood Hits	109	Target Neighborhood Hits	1407	Shared Neighborhood Hits	23
SwissProt Accessions	Q9Y3S1, Q8IY36, Q9C0A3, Q9H3P4	Gene names	WNK2, KIAA1760, PRKWNK2
Domain Architecture
Description	Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2).