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Network neighborhood for query Sequence : PCBP4_MOUSE

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PCBP4_MOUSE
SwissProt Accessions	P57724, Q91VR3	Gene names	Pcbp4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

PCBP4_HUMAN
θ value	0 (rank : 1)	NC score	0.998411 (rank : 2)
Query Neighborhood Hits	46	Target Neighborhood Hits	49	Shared Neighborhood Hits	42
SwissProt Accessions	P57723, Q96AH7	Gene names	PCBP4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).

PCBP4_MOUSE
θ value	0 (rank : 2)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	46	Target Neighborhood Hits	46	Shared Neighborhood Hits	46
SwissProt Accessions	P57724, Q91VR3	Gene names	Pcbp4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).

PCBP3_HUMAN
θ value	6.0463e-105 (rank : 3)	NC score	0.984056 (rank : 3)
Query Neighborhood Hits	46	Target Neighborhood Hits	48	Shared Neighborhood Hits	30
SwissProt Accessions	P57721, Q8N9K6, Q96EP6	Gene names	PCBP3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP3_MOUSE
θ value	2.2976e-104 (rank : 4)	NC score	0.983946 (rank : 4)
Query Neighborhood Hits	46	Target Neighborhood Hits	48	Shared Neighborhood Hits	30
SwissProt Accessions	P57722, Q8BSB0, Q8C544	Gene names	Pcbp3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP2_MOUSE
θ value	2.72037e-97 (rank : 5)	NC score	0.979568 (rank : 5)
Query Neighborhood Hits	46	Target Neighborhood Hits	47	Shared Neighborhood Hits	31
SwissProt Accessions	Q61990, Q61383, Q62042	Gene names	Pcbp2, Cbp, Hnrnpx, Hnrpx
Domain Architecture
Description	Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribonucleoprotein X) (hnRNP X) (CTBP) (CBP).

PCBP2_HUMAN
θ value	1.49272e-95 (rank : 6)	NC score	0.979357 (rank : 6)
Query Neighborhood Hits	46	Target Neighborhood Hits	45	Shared Neighborhood Hits	30
SwissProt Accessions	Q15366, Q6PKG5	Gene names	PCBP2
Domain Architecture
Description	Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2).

PCBP1_HUMAN
θ value	4.20666e-90 (rank : 7)	NC score	0.979207 (rank : 7)
Query Neighborhood Hits	46	Target Neighborhood Hits	37	Shared Neighborhood Hits	31
SwissProt Accessions	Q15365, Q13157, Q14975	Gene names	PCBP1
Domain Architecture
Description	Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1) (Nucleic acid- binding protein SUB2.3).

PCBP1_MOUSE
θ value	4.20666e-90 (rank : 8)	NC score	0.979207 (rank : 8)
Query Neighborhood Hits	46	Target Neighborhood Hits	37	Shared Neighborhood Hits	31
SwissProt Accessions	P60335	Gene names	Pcbp1
Domain Architecture
Description	Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1).

HNRPK_HUMAN
θ value	4.15078e-21 (rank : 9)	NC score	0.824960 (rank : 9)
Query Neighborhood Hits	46	Target Neighborhood Hits	45	Shared Neighborhood Hits	28
SwissProt Accessions	P61978, Q07244, Q15671, Q60577, Q922Y7, Q96J62	Gene names	HNRPK, HNRNPK
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP).

HNRPK_MOUSE
θ value	4.15078e-21 (rank : 10)	NC score	0.824960 (rank : 10)
Query Neighborhood Hits	46	Target Neighborhood Hits	45	Shared Neighborhood Hits	28
SwissProt Accessions	P61979, Q07244, Q15671, Q60577, Q8BGQ8, Q922Y7, Q96J62	Gene names	Hnrpk, Hnrnpk
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K.

NOVA1_HUMAN
θ value	5.8054e-15 (rank : 11)	NC score	0.769575 (rank : 11)
Query Neighborhood Hits	46	Target Neighborhood Hits	50	Shared Neighborhood Hits	30
SwissProt Accessions	P51513	Gene names	NOVA1
Domain Architecture
Description	RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ventral antigen 1) (Paraneoplastic Ri antigen) (Ventral neuron-specific protein 1).

NOVA2_HUMAN
θ value	2.88119e-14 (rank : 12)	NC score	0.769322 (rank : 12)
Query Neighborhood Hits	46	Target Neighborhood Hits	51	Shared Neighborhood Hits	31
SwissProt Accessions	Q9UNW9, O43267, Q9UEA1	Gene names	NOVA2, ANOVA, NOVA3
Domain Architecture
Description	RNA-binding protein Nova-2 (Neuro-oncological ventral antigen 2) (Astrocytic NOVA1-like RNA-binding protein).

IF2B2_MOUSE
θ value	1.09485e-13 (rank : 13)	NC score	0.607946 (rank : 18)
Query Neighborhood Hits	46	Target Neighborhood Hits	148	Shared Neighborhood Hits	31
SwissProt Accessions	Q5SF07, Q3TCU4, Q7TQF9	Gene names	Igf2bp2, Imp2
Domain Architecture	No domain graphic available
Description	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2).

FUBP1_HUMAN
θ value	1.42992e-13 (rank : 14)	NC score	0.617843 (rank : 16)
Query Neighborhood Hits	46	Target Neighborhood Hits	136	Shared Neighborhood Hits	32
SwissProt Accessions	Q96AE4, Q12828	Gene names	FUBP1
Domain Architecture
Description	Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP) (DNA helicase V) (HDH V).

FUBP2_HUMAN
θ value	2.43908e-13 (rank : 15)	NC score	0.633423 (rank : 14)
Query Neighborhood Hits	46	Target Neighborhood Hits	145	Shared Neighborhood Hits	33
SwissProt Accessions	Q92945, O00301, Q9UNT5, Q9UQH5	Gene names	KHSRP, FUBP2
Domain Architecture
Description	Far upstream element-binding protein 2 (FUSE-binding protein 2) (KH type-splicing regulatory protein) (KSRP) (p75).

FUBP1_MOUSE
θ value	3.18553e-13 (rank : 16)	NC score	0.618462 (rank : 15)
Query Neighborhood Hits	46	Target Neighborhood Hits	144	Shared Neighborhood Hits	33
SwissProt Accessions	Q91WJ8, Q8C0Y8	Gene names	Fubp1, D3Ertd330e
Domain Architecture
Description	Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP).

IF2B2_HUMAN
θ value	7.09661e-13 (rank : 17)	NC score	0.608147 (rank : 17)
Query Neighborhood Hits	46	Target Neighborhood Hits	142	Shared Neighborhood Hits	31
SwissProt Accessions	Q9Y6M1	Gene names	IGF2BP2, IMP2
Domain Architecture	No domain graphic available
Description	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62).

FUBP3_HUMAN
θ value	1.58096e-12 (rank : 18)	NC score	0.660505 (rank : 13)
Query Neighborhood Hits	46	Target Neighborhood Hits	68	Shared Neighborhood Hits	31
SwissProt Accessions	Q96I24, Q92946, Q9BVB6	Gene names	FUBP3
Domain Architecture
Description	Far upstream element-binding protein 3 (FUSE-binding protein 3).

TDRKH_HUMAN
θ value	8.40245e-06 (rank : 19)	NC score	0.448223 (rank : 19)
Query Neighborhood Hits	46	Target Neighborhood Hits	59	Shared Neighborhood Hits	28
SwissProt Accessions	Q9Y2W6, Q8N582, Q9NYV5	Gene names	TDRKH, TDRD2
Domain Architecture
Description	Tudor and KH domain-containing protein.

TDRKH_MOUSE
θ value	1.87187e-05 (rank : 20)	NC score	0.445566 (rank : 20)
Query Neighborhood Hits	46	Target Neighborhood Hits	59	Shared Neighborhood Hits	27
SwissProt Accessions	Q80VL1	Gene names	Tdrkh
Domain Architecture
Description	Tudor and KH domain-containing protein.

VIGLN_HUMAN
θ value	0.00390308 (rank : 21)	NC score	0.352093 (rank : 22)
Query Neighborhood Hits	46	Target Neighborhood Hits	71	Shared Neighborhood Hits	27
SwissProt Accessions	Q00341, Q9UCY3	Gene names	HDLBP, HBP, VGL
Domain Architecture
Description	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).

VIGLN_MOUSE
θ value	0.00390308 (rank : 22)	NC score	0.352730 (rank : 21)
Query Neighborhood Hits	46	Target Neighborhood Hits	80	Shared Neighborhood Hits	27
SwissProt Accessions	Q8VDJ3	Gene names	Hdlbp
Domain Architecture
Description	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).

EFS_HUMAN
θ value	0.00665767 (rank : 23)	NC score	0.062296 (rank : 31)
Query Neighborhood Hits	46	Target Neighborhood Hits	348	Shared Neighborhood Hits	7
SwissProt Accessions	O43281, O43282	Gene names	EFS
Domain Architecture
Description	Embryonal Fyn-associated substrate (HEFS).

TF2AY_HUMAN
θ value	0.163984 (rank : 24)	NC score	0.047302 (rank : 35)
Query Neighborhood Hits	46	Target Neighborhood Hits	77	Shared Neighborhood Hits	3
SwissProt Accessions	Q9UNN4	Gene names	GTF2A1LF, ALF
Domain Architecture
Description	TFIIA-alpha and beta-like factor (General transcription factor II A, 1-like factor).

TAF4_HUMAN
θ value	0.21417 (rank : 25)	NC score	0.037818 (rank : 37)
Query Neighborhood Hits	46	Target Neighborhood Hits	687	Shared Neighborhood Hits	8
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

DDX53_HUMAN
θ value	0.279714 (rank : 26)	NC score	0.058291 (rank : 32)
Query Neighborhood Hits	46	Target Neighborhood Hits	124	Shared Neighborhood Hits	25
SwissProt Accessions	Q86TM3, Q6NVV4	Gene names	DDX53, CAGE
Domain Architecture	No domain graphic available
Description	Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-) (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein).

AKAP1_MOUSE
θ value	0.365318 (rank : 27)	NC score	0.193701 (rank : 25)
Query Neighborhood Hits	46	Target Neighborhood Hits	198	Shared Neighborhood Hits	24
SwissProt Accessions	O08715, O08714, P97488	Gene names	Akap1, Akap
Domain Architecture
Description	A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP).

RKHD1_HUMAN
θ value	0.47712 (rank : 28)	NC score	0.235121 (rank : 23)
Query Neighborhood Hits	46	Target Neighborhood Hits	163	Shared Neighborhood Hits	23
SwissProt Accessions	Q86XN8	Gene names	RKHD1, KIAA2031
Domain Architecture
Description	RING finger and KH domain-containing protein 1.

AKAP1_HUMAN
θ value	0.813845 (rank : 29)	NC score	0.205586 (rank : 24)
Query Neighborhood Hits	46	Target Neighborhood Hits	88	Shared Neighborhood Hits	24
SwissProt Accessions	Q92667, Q13320, Q9BW14	Gene names	AKAP1, AKAP149
Domain Architecture
Description	A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein 84) (S-AKAP84).

SAM68_HUMAN
θ value	1.81305 (rank : 30)	NC score	0.135809 (rank : 26)
Query Neighborhood Hits	46	Target Neighborhood Hits	68	Shared Neighborhood Hits	21
SwissProt Accessions	Q07666, Q6PJX7, Q8NB97, Q99760	Gene names	KHDRBS1, SAM68
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

SAM68_MOUSE
θ value	1.81305 (rank : 31)	NC score	0.133533 (rank : 27)
Query Neighborhood Hits	46	Target Neighborhood Hits	65	Shared Neighborhood Hits	22
SwissProt Accessions	Q60749, Q3U8T3, Q60735, Q99M33	Gene names	Khdrbs1
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

FOXK1_MOUSE
θ value	3.0926 (rank : 32)	NC score	0.005440 (rank : 46)
Query Neighborhood Hits	46	Target Neighborhood Hits	215	Shared Neighborhood Hits	3
SwissProt Accessions	P42128, O35939	Gene names	Foxk1, Mnf
Domain Architecture
Description	Forkhead box protein K1 (Myocyte nuclear factor) (MNF).

JHD2B_HUMAN
θ value	3.0926 (rank : 33)	NC score	0.011871 (rank : 42)
Query Neighborhood Hits	46	Target Neighborhood Hits	171	Shared Neighborhood Hits	3
SwissProt Accessions	Q7LBC6, Q9BVH6, Q9BW93, Q9BZ52, Q9NYF4, Q9UPS0	Gene names	JMJD1B, C5orf7, JHDM2B, KIAA1082
Domain Architecture	No domain graphic available
Description	JmjC domain-containing histone demethylation protein 2B (EC 1.14.11.-) (Jumonji domain-containing protein 1B) (Nuclear protein 5qNCA).

FXR1_HUMAN
θ value	4.03905 (rank : 34)	NC score	0.088052 (rank : 28)
Query Neighborhood Hits	46	Target Neighborhood Hits	50	Shared Neighborhood Hits	26
SwissProt Accessions	P51114, Q7Z450, Q8N6R8	Gene names	FXR1
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 1 (hFXR1P).

FXR1_MOUSE
θ value	4.03905 (rank : 35)	NC score	0.086110 (rank : 30)
Query Neighborhood Hits	46	Target Neighborhood Hits	49	Shared Neighborhood Hits	26
SwissProt Accessions	Q61584, Q8VCU4, Q9R1E2, Q9R1E3, Q9R1E4, Q9R1E5, Q9WUA7, Q9WUA8, Q9WUA9	Gene names	Fxr1, Fxr1h
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 1 (mFxr1p).

SC24C_HUMAN
θ value	4.03905 (rank : 36)	NC score	0.009389 (rank : 44)
Query Neighborhood Hits	46	Target Neighborhood Hits	662	Shared Neighborhood Hits	8
SwissProt Accessions	P53992, Q8WV25	Gene names	SEC24C, KIAA0079
Domain Architecture
Description	Protein transport protein Sec24C (SEC24-related protein C).

UBE2T_MOUSE
θ value	4.03905 (rank : 37)	NC score	0.012293 (rank : 40)
Query Neighborhood Hits	46	Target Neighborhood Hits	65	Shared Neighborhood Hits	4
SwissProt Accessions	Q9CQ37	Gene names	Ube2t
Domain Architecture	No domain graphic available
Description	Ubiquitin-conjugating enzyme E2 T (EC 6.3.2.19) (Ubiquitin-protein ligase T) (Ubiquitin carrier protein T).

DDX43_HUMAN
θ value	5.27518 (rank : 38)	NC score	0.042897 (rank : 36)
Query Neighborhood Hits	46	Target Neighborhood Hits	120	Shared Neighborhood Hits	21
SwissProt Accessions	Q9NXZ2, Q6NXR1	Gene names	DDX43, HAGE
Domain Architecture	No domain graphic available
Description	Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen).

NFAC2_MOUSE
θ value	5.27518 (rank : 39)	NC score	0.007270 (rank : 45)
Query Neighborhood Hits	46	Target Neighborhood Hits	98	Shared Neighborhood Hits	2
SwissProt Accessions	Q60591, Q60984, Q60985	Gene names	Nfatc2, Nfat1, Nfatp
Domain Architecture
Description	Nuclear factor of activated T-cells, cytoplasmic 2 (T cell transcription factor NFAT1) (NFAT pre-existing subunit) (NF-ATp).

UBE2T_HUMAN
θ value	5.27518 (rank : 40)	NC score	0.011155 (rank : 43)
Query Neighborhood Hits	46	Target Neighborhood Hits	65	Shared Neighborhood Hits	4
SwissProt Accessions	Q9NPD8	Gene names	UBE2T
Domain Architecture	No domain graphic available
Description	Ubiquitin-conjugating enzyme E2 T (EC 6.3.2.19) (Ubiquitin-protein ligase T) (Ubiquitin carrier protein T).

HXD12_MOUSE
θ value	6.88961 (rank : 41)	NC score	0.001096 (rank : 47)
Query Neighborhood Hits	46	Target Neighborhood Hits	370	Shared Neighborhood Hits	2
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

SON_HUMAN
θ value	6.88961 (rank : 42)	NC score	0.012093 (rank : 41)
Query Neighborhood Hits	46	Target Neighborhood Hits	1568	Shared Neighborhood Hits	13
SwissProt Accessions	P18583, O14487, O95981, Q14120, Q9H7B1, Q9P070, Q9P072, Q9UKP9, Q9UPY0	Gene names	SON, C21orf50, DBP5, KIAA1019, NREBP
Domain Architecture
Description	SON protein (SON3) (Negative regulatory element-binding protein) (NRE- binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1).

SPEG_HUMAN
θ value	6.88961 (rank : 43)	NC score	-0.000037 (rank : 48)
Query Neighborhood Hits	46	Target Neighborhood Hits	1762	Shared Neighborhood Hits	10
SwissProt Accessions	Q15772, Q27J74, Q695L1, Q6FGA6, Q6ZQW1, Q6ZTL8, Q9P2P9	Gene names	SPEG, APEG1, KIAA1297
Domain Architecture
Description	Striated muscle preferentially expressed protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

SPEG_MOUSE
θ value	6.88961 (rank : 44)	NC score	-0.000153 (rank : 49)
Query Neighborhood Hits	46	Target Neighborhood Hits	1959	Shared Neighborhood Hits	11
SwissProt Accessions	Q62407, Q3TPH8, Q6P5V1, Q80TF7, Q80ZN0, Q8BZF4, Q9EQJ5	Gene names	Speg, Apeg1, Kiaa1297
Domain Architecture
Description	Striated muscle-specific serine/threonine protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

TOM1_MOUSE
θ value	6.88961 (rank : 45)	NC score	0.012504 (rank : 39)
Query Neighborhood Hits	46	Target Neighborhood Hits	53	Shared Neighborhood Hits	3
SwissProt Accessions	O88746, Q3V4C6, Q9D120	Gene names	Tom1
Domain Architecture
Description	Target of Myb protein 1.

MISS_MOUSE
θ value	8.99809 (rank : 46)	NC score	0.015874 (rank : 38)
Query Neighborhood Hits	46	Target Neighborhood Hits	444	Shared Neighborhood Hits	11
SwissProt Accessions	Q9D7G9, Q7M749	Gene names	Mapk1ip1, Miss
Domain Architecture	No domain graphic available
Description	MAPK-interacting and spindle-stabilizing protein (Mitogen-activated protein kinase 1-interacting protein 1).

FMR1_HUMAN
θ value	θ > 10 (rank : 47)	NC score	0.054328 (rank : 33)
Query Neighborhood Hits	46	Target Neighborhood Hits	45	Shared Neighborhood Hits	20
SwissProt Accessions	Q06787, Q16578, Q99054	Gene names	FMR1
Domain Architecture
Description	Fragile X mental retardation 1 protein (Protein FMR-1) (FMRP).

FMR1_MOUSE
θ value	θ > 10 (rank : 48)	NC score	0.052887 (rank : 34)
Query Neighborhood Hits	46	Target Neighborhood Hits	47	Shared Neighborhood Hits	20
SwissProt Accessions	P35922	Gene names	Fmr1, Fmr-1
Domain Architecture
Description	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (FMRP) (mFmr1p).

FXR2_HUMAN
θ value	θ > 10 (rank : 49)	NC score	0.087888 (rank : 29)
Query Neighborhood Hits	46	Target Neighborhood Hits	77	Shared Neighborhood Hits	23
SwissProt Accessions	P51116, Q8WUM2	Gene names	FXR2
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

Hits sorted by NC score

PCBP4_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 2)
Query Neighborhood Hits	46	Target Neighborhood Hits	46	Shared Neighborhood Hits	46
SwissProt Accessions	P57724, Q91VR3	Gene names	Pcbp4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).

PCBP4_HUMAN
NC score	0.998411 (rank : 2)	θ value	0 (rank : 1)
Query Neighborhood Hits	46	Target Neighborhood Hits	49	Shared Neighborhood Hits	42
SwissProt Accessions	P57723, Q96AH7	Gene names	PCBP4
Domain Architecture
Description	Poly(rC)-binding protein 4 (Alpha-CP4).

PCBP3_HUMAN
NC score	0.984056 (rank : 3)	θ value	6.0463e-105 (rank : 3)
Query Neighborhood Hits	46	Target Neighborhood Hits	48	Shared Neighborhood Hits	30
SwissProt Accessions	P57721, Q8N9K6, Q96EP6	Gene names	PCBP3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP3_MOUSE
NC score	0.983946 (rank : 4)	θ value	2.2976e-104 (rank : 4)
Query Neighborhood Hits	46	Target Neighborhood Hits	48	Shared Neighborhood Hits	30
SwissProt Accessions	P57722, Q8BSB0, Q8C544	Gene names	Pcbp3
Domain Architecture
Description	Poly(rC)-binding protein 3 (Alpha-CP3).

PCBP2_MOUSE
NC score	0.979568 (rank : 5)	θ value	2.72037e-97 (rank : 5)
Query Neighborhood Hits	46	Target Neighborhood Hits	47	Shared Neighborhood Hits	31
SwissProt Accessions	Q61990, Q61383, Q62042	Gene names	Pcbp2, Cbp, Hnrnpx, Hnrpx
Domain Architecture
Description	Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribonucleoprotein X) (hnRNP X) (CTBP) (CBP).

PCBP2_HUMAN
NC score	0.979357 (rank : 6)	θ value	1.49272e-95 (rank : 6)
Query Neighborhood Hits	46	Target Neighborhood Hits	45	Shared Neighborhood Hits	30
SwissProt Accessions	Q15366, Q6PKG5	Gene names	PCBP2
Domain Architecture
Description	Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2).

PCBP1_HUMAN
NC score	0.979207 (rank : 7)	θ value	4.20666e-90 (rank : 7)
Query Neighborhood Hits	46	Target Neighborhood Hits	37	Shared Neighborhood Hits	31
SwissProt Accessions	Q15365, Q13157, Q14975	Gene names	PCBP1
Domain Architecture
Description	Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1) (Nucleic acid- binding protein SUB2.3).

PCBP1_MOUSE
NC score	0.979207 (rank : 8)	θ value	4.20666e-90 (rank : 8)
Query Neighborhood Hits	46	Target Neighborhood Hits	37	Shared Neighborhood Hits	31
SwissProt Accessions	P60335	Gene names	Pcbp1
Domain Architecture
Description	Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1).

HNRPK_HUMAN
NC score	0.824960 (rank : 9)	θ value	4.15078e-21 (rank : 9)
Query Neighborhood Hits	46	Target Neighborhood Hits	45	Shared Neighborhood Hits	28
SwissProt Accessions	P61978, Q07244, Q15671, Q60577, Q922Y7, Q96J62	Gene names	HNRPK, HNRNPK
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP).

HNRPK_MOUSE
NC score	0.824960 (rank : 10)	θ value	4.15078e-21 (rank : 10)
Query Neighborhood Hits	46	Target Neighborhood Hits	45	Shared Neighborhood Hits	28
SwissProt Accessions	P61979, Q07244, Q15671, Q60577, Q8BGQ8, Q922Y7, Q96J62	Gene names	Hnrpk, Hnrnpk
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein K.

NOVA1_HUMAN
NC score	0.769575 (rank : 11)	θ value	5.8054e-15 (rank : 11)
Query Neighborhood Hits	46	Target Neighborhood Hits	50	Shared Neighborhood Hits	30
SwissProt Accessions	P51513	Gene names	NOVA1
Domain Architecture
Description	RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ventral antigen 1) (Paraneoplastic Ri antigen) (Ventral neuron-specific protein 1).

NOVA2_HUMAN
NC score	0.769322 (rank : 12)	θ value	2.88119e-14 (rank : 12)
Query Neighborhood Hits	46	Target Neighborhood Hits	51	Shared Neighborhood Hits	31
SwissProt Accessions	Q9UNW9, O43267, Q9UEA1	Gene names	NOVA2, ANOVA, NOVA3
Domain Architecture
Description	RNA-binding protein Nova-2 (Neuro-oncological ventral antigen 2) (Astrocytic NOVA1-like RNA-binding protein).

FUBP3_HUMAN
NC score	0.660505 (rank : 13)	θ value	1.58096e-12 (rank : 18)
Query Neighborhood Hits	46	Target Neighborhood Hits	68	Shared Neighborhood Hits	31
SwissProt Accessions	Q96I24, Q92946, Q9BVB6	Gene names	FUBP3
Domain Architecture
Description	Far upstream element-binding protein 3 (FUSE-binding protein 3).

FUBP2_HUMAN
NC score	0.633423 (rank : 14)	θ value	2.43908e-13 (rank : 15)
Query Neighborhood Hits	46	Target Neighborhood Hits	145	Shared Neighborhood Hits	33
SwissProt Accessions	Q92945, O00301, Q9UNT5, Q9UQH5	Gene names	KHSRP, FUBP2
Domain Architecture
Description	Far upstream element-binding protein 2 (FUSE-binding protein 2) (KH type-splicing regulatory protein) (KSRP) (p75).

FUBP1_MOUSE
NC score	0.618462 (rank : 15)	θ value	3.18553e-13 (rank : 16)
Query Neighborhood Hits	46	Target Neighborhood Hits	144	Shared Neighborhood Hits	33
SwissProt Accessions	Q91WJ8, Q8C0Y8	Gene names	Fubp1, D3Ertd330e
Domain Architecture
Description	Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP).

FUBP1_HUMAN
NC score	0.617843 (rank : 16)	θ value	1.42992e-13 (rank : 14)
Query Neighborhood Hits	46	Target Neighborhood Hits	136	Shared Neighborhood Hits	32
SwissProt Accessions	Q96AE4, Q12828	Gene names	FUBP1
Domain Architecture
Description	Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP) (DNA helicase V) (HDH V).

IF2B2_HUMAN
NC score	0.608147 (rank : 17)	θ value	7.09661e-13 (rank : 17)
Query Neighborhood Hits	46	Target Neighborhood Hits	142	Shared Neighborhood Hits	31
SwissProt Accessions	Q9Y6M1	Gene names	IGF2BP2, IMP2
Domain Architecture	No domain graphic available
Description	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62).

IF2B2_MOUSE
NC score	0.607946 (rank : 18)	θ value	1.09485e-13 (rank : 13)
Query Neighborhood Hits	46	Target Neighborhood Hits	148	Shared Neighborhood Hits	31
SwissProt Accessions	Q5SF07, Q3TCU4, Q7TQF9	Gene names	Igf2bp2, Imp2
Domain Architecture	No domain graphic available
Description	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2).

TDRKH_HUMAN
NC score	0.448223 (rank : 19)	θ value	8.40245e-06 (rank : 19)
Query Neighborhood Hits	46	Target Neighborhood Hits	59	Shared Neighborhood Hits	28
SwissProt Accessions	Q9Y2W6, Q8N582, Q9NYV5	Gene names	TDRKH, TDRD2
Domain Architecture
Description	Tudor and KH domain-containing protein.

TDRKH_MOUSE
NC score	0.445566 (rank : 20)	θ value	1.87187e-05 (rank : 20)
Query Neighborhood Hits	46	Target Neighborhood Hits	59	Shared Neighborhood Hits	27
SwissProt Accessions	Q80VL1	Gene names	Tdrkh
Domain Architecture
Description	Tudor and KH domain-containing protein.

VIGLN_MOUSE
NC score	0.352730 (rank : 21)	θ value	0.00390308 (rank : 22)
Query Neighborhood Hits	46	Target Neighborhood Hits	80	Shared Neighborhood Hits	27
SwissProt Accessions	Q8VDJ3	Gene names	Hdlbp
Domain Architecture
Description	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).

VIGLN_HUMAN
NC score	0.352093 (rank : 22)	θ value	0.00390308 (rank : 21)
Query Neighborhood Hits	46	Target Neighborhood Hits	71	Shared Neighborhood Hits	27
SwissProt Accessions	Q00341, Q9UCY3	Gene names	HDLBP, HBP, VGL
Domain Architecture
Description	Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).

RKHD1_HUMAN
NC score	0.235121 (rank : 23)	θ value	0.47712 (rank : 28)
Query Neighborhood Hits	46	Target Neighborhood Hits	163	Shared Neighborhood Hits	23
SwissProt Accessions	Q86XN8	Gene names	RKHD1, KIAA2031
Domain Architecture
Description	RING finger and KH domain-containing protein 1.

AKAP1_HUMAN
NC score	0.205586 (rank : 24)	θ value	0.813845 (rank : 29)
Query Neighborhood Hits	46	Target Neighborhood Hits	88	Shared Neighborhood Hits	24
SwissProt Accessions	Q92667, Q13320, Q9BW14	Gene names	AKAP1, AKAP149
Domain Architecture
Description	A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein 84) (S-AKAP84).

AKAP1_MOUSE
NC score	0.193701 (rank : 25)	θ value	0.365318 (rank : 27)
Query Neighborhood Hits	46	Target Neighborhood Hits	198	Shared Neighborhood Hits	24
SwissProt Accessions	O08715, O08714, P97488	Gene names	Akap1, Akap
Domain Architecture
Description	A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP).

SAM68_HUMAN
NC score	0.135809 (rank : 26)	θ value	1.81305 (rank : 30)
Query Neighborhood Hits	46	Target Neighborhood Hits	68	Shared Neighborhood Hits	21
SwissProt Accessions	Q07666, Q6PJX7, Q8NB97, Q99760	Gene names	KHDRBS1, SAM68
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

SAM68_MOUSE
NC score	0.133533 (rank : 27)	θ value	1.81305 (rank : 31)
Query Neighborhood Hits	46	Target Neighborhood Hits	65	Shared Neighborhood Hits	22
SwissProt Accessions	Q60749, Q3U8T3, Q60735, Q99M33	Gene names	Khdrbs1
Domain Architecture	No domain graphic available
Description	KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).

FXR1_HUMAN
NC score	0.088052 (rank : 28)	θ value	4.03905 (rank : 34)
Query Neighborhood Hits	46	Target Neighborhood Hits	50	Shared Neighborhood Hits	26
SwissProt Accessions	P51114, Q7Z450, Q8N6R8	Gene names	FXR1
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 1 (hFXR1P).

FXR2_HUMAN
NC score	0.087888 (rank : 29)	θ value	θ > 10 (rank : 49)
Query Neighborhood Hits	46	Target Neighborhood Hits	77	Shared Neighborhood Hits	23
SwissProt Accessions	P51116, Q8WUM2	Gene names	FXR2
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 2.

FXR1_MOUSE
NC score	0.086110 (rank : 30)	θ value	4.03905 (rank : 35)
Query Neighborhood Hits	46	Target Neighborhood Hits	49	Shared Neighborhood Hits	26
SwissProt Accessions	Q61584, Q8VCU4, Q9R1E2, Q9R1E3, Q9R1E4, Q9R1E5, Q9WUA7, Q9WUA8, Q9WUA9	Gene names	Fxr1, Fxr1h
Domain Architecture
Description	Fragile X mental retardation syndrome-related protein 1 (mFxr1p).

EFS_HUMAN
NC score	0.062296 (rank : 31)	θ value	0.00665767 (rank : 23)
Query Neighborhood Hits	46	Target Neighborhood Hits	348	Shared Neighborhood Hits	7
SwissProt Accessions	O43281, O43282	Gene names	EFS
Domain Architecture
Description	Embryonal Fyn-associated substrate (HEFS).

DDX53_HUMAN
NC score	0.058291 (rank : 32)	θ value	0.279714 (rank : 26)
Query Neighborhood Hits	46	Target Neighborhood Hits	124	Shared Neighborhood Hits	25
SwissProt Accessions	Q86TM3, Q6NVV4	Gene names	DDX53, CAGE
Domain Architecture	No domain graphic available
Description	Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-) (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein).

FMR1_HUMAN
NC score	0.054328 (rank : 33)	θ value	θ > 10 (rank : 47)
Query Neighborhood Hits	46	Target Neighborhood Hits	45	Shared Neighborhood Hits	20
SwissProt Accessions	Q06787, Q16578, Q99054	Gene names	FMR1
Domain Architecture
Description	Fragile X mental retardation 1 protein (Protein FMR-1) (FMRP).

FMR1_MOUSE
NC score	0.052887 (rank : 34)	θ value	θ > 10 (rank : 48)
Query Neighborhood Hits	46	Target Neighborhood Hits	47	Shared Neighborhood Hits	20
SwissProt Accessions	P35922	Gene names	Fmr1, Fmr-1
Domain Architecture
Description	Fragile X mental retardation protein 1 homolog (Protein FMR-1) (FMRP) (mFmr1p).

TF2AY_HUMAN
NC score	0.047302 (rank : 35)	θ value	0.163984 (rank : 24)
Query Neighborhood Hits	46	Target Neighborhood Hits	77	Shared Neighborhood Hits	3
SwissProt Accessions	Q9UNN4	Gene names	GTF2A1LF, ALF
Domain Architecture
Description	TFIIA-alpha and beta-like factor (General transcription factor II A, 1-like factor).

DDX43_HUMAN
NC score	0.042897 (rank : 36)	θ value	5.27518 (rank : 38)
Query Neighborhood Hits	46	Target Neighborhood Hits	120	Shared Neighborhood Hits	21
SwissProt Accessions	Q9NXZ2, Q6NXR1	Gene names	DDX43, HAGE
Domain Architecture	No domain graphic available
Description	Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen).

TAF4_HUMAN
NC score	0.037818 (rank : 37)	θ value	0.21417 (rank : 25)
Query Neighborhood Hits	46	Target Neighborhood Hits	687	Shared Neighborhood Hits	8
SwissProt Accessions	O00268, Q5TBP6, Q99721, Q9BR40, Q9BX42	Gene names	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135
Domain Architecture
Description	Transcription initiation factor TFIID subunit 4 (TBP-associated factor 4) (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130).

MISS_MOUSE
NC score	0.015874 (rank : 38)	θ value	8.99809 (rank : 46)
Query Neighborhood Hits	46	Target Neighborhood Hits	444	Shared Neighborhood Hits	11
SwissProt Accessions	Q9D7G9, Q7M749	Gene names	Mapk1ip1, Miss
Domain Architecture	No domain graphic available
Description	MAPK-interacting and spindle-stabilizing protein (Mitogen-activated protein kinase 1-interacting protein 1).

TOM1_MOUSE
NC score	0.012504 (rank : 39)	θ value	6.88961 (rank : 45)
Query Neighborhood Hits	46	Target Neighborhood Hits	53	Shared Neighborhood Hits	3
SwissProt Accessions	O88746, Q3V4C6, Q9D120	Gene names	Tom1
Domain Architecture
Description	Target of Myb protein 1.

UBE2T_MOUSE
NC score	0.012293 (rank : 40)	θ value	4.03905 (rank : 37)
Query Neighborhood Hits	46	Target Neighborhood Hits	65	Shared Neighborhood Hits	4
SwissProt Accessions	Q9CQ37	Gene names	Ube2t
Domain Architecture	No domain graphic available
Description	Ubiquitin-conjugating enzyme E2 T (EC 6.3.2.19) (Ubiquitin-protein ligase T) (Ubiquitin carrier protein T).

SON_HUMAN
NC score	0.012093 (rank : 41)	θ value	6.88961 (rank : 42)
Query Neighborhood Hits	46	Target Neighborhood Hits	1568	Shared Neighborhood Hits	13
SwissProt Accessions	P18583, O14487, O95981, Q14120, Q9H7B1, Q9P070, Q9P072, Q9UKP9, Q9UPY0	Gene names	SON, C21orf50, DBP5, KIAA1019, NREBP
Domain Architecture
Description	SON protein (SON3) (Negative regulatory element-binding protein) (NRE- binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1).

JHD2B_HUMAN
NC score	0.011871 (rank : 42)	θ value	3.0926 (rank : 33)
Query Neighborhood Hits	46	Target Neighborhood Hits	171	Shared Neighborhood Hits	3
SwissProt Accessions	Q7LBC6, Q9BVH6, Q9BW93, Q9BZ52, Q9NYF4, Q9UPS0	Gene names	JMJD1B, C5orf7, JHDM2B, KIAA1082
Domain Architecture	No domain graphic available
Description	JmjC domain-containing histone demethylation protein 2B (EC 1.14.11.-) (Jumonji domain-containing protein 1B) (Nuclear protein 5qNCA).

UBE2T_HUMAN
NC score	0.011155 (rank : 43)	θ value	5.27518 (rank : 40)
Query Neighborhood Hits	46	Target Neighborhood Hits	65	Shared Neighborhood Hits	4
SwissProt Accessions	Q9NPD8	Gene names	UBE2T
Domain Architecture	No domain graphic available
Description	Ubiquitin-conjugating enzyme E2 T (EC 6.3.2.19) (Ubiquitin-protein ligase T) (Ubiquitin carrier protein T).

SC24C_HUMAN
NC score	0.009389 (rank : 44)	θ value	4.03905 (rank : 36)
Query Neighborhood Hits	46	Target Neighborhood Hits	662	Shared Neighborhood Hits	8
SwissProt Accessions	P53992, Q8WV25	Gene names	SEC24C, KIAA0079
Domain Architecture
Description	Protein transport protein Sec24C (SEC24-related protein C).

NFAC2_MOUSE
NC score	0.007270 (rank : 45)	θ value	5.27518 (rank : 39)
Query Neighborhood Hits	46	Target Neighborhood Hits	98	Shared Neighborhood Hits	2
SwissProt Accessions	Q60591, Q60984, Q60985	Gene names	Nfatc2, Nfat1, Nfatp
Domain Architecture
Description	Nuclear factor of activated T-cells, cytoplasmic 2 (T cell transcription factor NFAT1) (NFAT pre-existing subunit) (NF-ATp).

FOXK1_MOUSE
NC score	0.005440 (rank : 46)	θ value	3.0926 (rank : 32)
Query Neighborhood Hits	46	Target Neighborhood Hits	215	Shared Neighborhood Hits	3
SwissProt Accessions	P42128, O35939	Gene names	Foxk1, Mnf
Domain Architecture
Description	Forkhead box protein K1 (Myocyte nuclear factor) (MNF).

HXD12_MOUSE
NC score	0.001096 (rank : 47)	θ value	6.88961 (rank : 41)
Query Neighborhood Hits	46	Target Neighborhood Hits	370	Shared Neighborhood Hits	2
SwissProt Accessions	P23812	Gene names	Hoxd12, Hox-4.7, Hoxd-12
Domain Architecture
Description	Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6).

SPEG_HUMAN
NC score	-0.000037 (rank : 48)	θ value	6.88961 (rank : 43)
Query Neighborhood Hits	46	Target Neighborhood Hits	1762	Shared Neighborhood Hits	10
SwissProt Accessions	Q15772, Q27J74, Q695L1, Q6FGA6, Q6ZQW1, Q6ZTL8, Q9P2P9	Gene names	SPEG, APEG1, KIAA1297
Domain Architecture
Description	Striated muscle preferentially expressed protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

SPEG_MOUSE
NC score	-0.000153 (rank : 49)	θ value	6.88961 (rank : 44)
Query Neighborhood Hits	46	Target Neighborhood Hits	1959	Shared Neighborhood Hits	11
SwissProt Accessions	Q62407, Q3TPH8, Q6P5V1, Q80TF7, Q80ZN0, Q8BZF4, Q9EQJ5	Gene names	Speg, Apeg1, Kiaa1297
Domain Architecture
Description	Striated muscle-specific serine/threonine protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).