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Network neighborhood for query Sequence : PCBP2_HUMAN

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PCBP2_HUMAN
 
SwissProt Accessions Q15366, Q6PKG5 Gene names PCBP2
Domain
Architecture
Description Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2).
Rank Plots



Hits sorted by θ


PCBP2_HUMAN
 
θ value 0 (rank : 1) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 45 Target Neighborhood Hits 45 Shared Neighborhood Hits 45
SwissProt Accessions Q15366, Q6PKG5 Gene names PCBP2
Domain
Architecture
Description Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2).
PCBP2_MOUSE
 
θ value 0 (rank : 2) NC score 0.999586 (rank : 2)
Query Neighborhood Hits 45 Target Neighborhood Hits 47 Shared Neighborhood Hits 43
SwissProt Accessions Q61990, Q61383, Q62042 Gene names Pcbp2, Cbp, Hnrnpx, Hnrpx
Domain
Architecture
Description Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribonucleoprotein X) (hnRNP X) (CTBP) (CBP).
PCBP1_HUMAN
 
θ value 2.41524e-162 (rank : 3) NC score 0.996587 (rank : 3)
Query Neighborhood Hits 45 Target Neighborhood Hits 37 Shared Neighborhood Hits 32
SwissProt Accessions Q15365, Q13157, Q14975 Gene names PCBP1
Domain
Architecture
Description Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1) (Nucleic acid- binding protein SUB2.3).
PCBP1_MOUSE
 
θ value 2.41524e-162 (rank : 4) NC score 0.996587 (rank : 4)
Query Neighborhood Hits 45 Target Neighborhood Hits 37 Shared Neighborhood Hits 32
SwissProt Accessions P60335 Gene names Pcbp1
Domain
Architecture
Description Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1).
PCBP3_HUMAN
 
θ value 3.28708e-135 (rank : 5) NC score 0.987842 (rank : 6)
Query Neighborhood Hits 45 Target Neighborhood Hits 48 Shared Neighborhood Hits 33
SwissProt Accessions P57721, Q8N9K6, Q96EP6 Gene names PCBP3
Domain
Architecture
Description Poly(rC)-binding protein 3 (Alpha-CP3).
PCBP3_MOUSE
 
θ value 3.28708e-135 (rank : 6) NC score 0.987864 (rank : 5)
Query Neighborhood Hits 45 Target Neighborhood Hits 48 Shared Neighborhood Hits 33
SwissProt Accessions P57722, Q8BSB0, Q8C544 Gene names Pcbp3
Domain
Architecture
Description Poly(rC)-binding protein 3 (Alpha-CP3).
PCBP4_MOUSE
 
θ value 1.49272e-95 (rank : 7) NC score 0.979357 (rank : 7)
Query Neighborhood Hits 45 Target Neighborhood Hits 46 Shared Neighborhood Hits 30
SwissProt Accessions P57724, Q91VR3 Gene names Pcbp4
Domain
Architecture
Description Poly(rC)-binding protein 4 (Alpha-CP4).
PCBP4_HUMAN
 
θ value 9.6755e-95 (rank : 8) NC score 0.977419 (rank : 8)
Query Neighborhood Hits 45 Target Neighborhood Hits 49 Shared Neighborhood Hits 30
SwissProt Accessions P57723, Q96AH7 Gene names PCBP4
Domain
Architecture
Description Poly(rC)-binding protein 4 (Alpha-CP4).
HNRPK_HUMAN
 
θ value 1.08726e-37 (rank : 9) NC score 0.865185 (rank : 9)
Query Neighborhood Hits 45 Target Neighborhood Hits 45 Shared Neighborhood Hits 30
SwissProt Accessions P61978, Q07244, Q15671, Q60577, Q922Y7, Q96J62 Gene names HNRPK, HNRNPK
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP).
HNRPK_MOUSE
 
θ value 1.08726e-37 (rank : 10) NC score 0.865185 (rank : 10)
Query Neighborhood Hits 45 Target Neighborhood Hits 45 Shared Neighborhood Hits 30
SwissProt Accessions P61979, Q07244, Q15671, Q60577, Q8BGQ8, Q922Y7, Q96J62 Gene names Hnrpk, Hnrnpk
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein K.
NOVA1_HUMAN
 
θ value 5.42112e-21 (rank : 11) NC score 0.778606 (rank : 11)
Query Neighborhood Hits 45 Target Neighborhood Hits 50 Shared Neighborhood Hits 30
SwissProt Accessions P51513 Gene names NOVA1
Domain
Architecture
Description RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ventral antigen 1) (Paraneoplastic Ri antigen) (Ventral neuron-specific protein 1).
FUBP3_HUMAN
 
θ value 1.058e-16 (rank : 12) NC score 0.664398 (rank : 13)
Query Neighborhood Hits 45 Target Neighborhood Hits 68 Shared Neighborhood Hits 31
SwissProt Accessions Q96I24, Q92946, Q9BVB6 Gene names FUBP3
Domain
Architecture
Description Far upstream element-binding protein 3 (FUSE-binding protein 3).
FUBP2_HUMAN
 
θ value 2.88119e-14 (rank : 13) NC score 0.633333 (rank : 14)
Query Neighborhood Hits 45 Target Neighborhood Hits 145 Shared Neighborhood Hits 32
SwissProt Accessions Q92945, O00301, Q9UNT5, Q9UQH5 Gene names KHSRP, FUBP2
Domain
Architecture
Description Far upstream element-binding protein 2 (FUSE-binding protein 2) (KH type-splicing regulatory protein) (KSRP) (p75).
FUBP1_MOUSE
 
θ value 6.41864e-14 (rank : 14) NC score 0.617258 (rank : 15)
Query Neighborhood Hits 45 Target Neighborhood Hits 144 Shared Neighborhood Hits 32
SwissProt Accessions Q91WJ8, Q8C0Y8 Gene names Fubp1, D3Ertd330e
Domain
Architecture
Description Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP).
IF2B2_MOUSE
 
θ value 8.38298e-14 (rank : 15) NC score 0.602376 (rank : 18)
Query Neighborhood Hits 45 Target Neighborhood Hits 148 Shared Neighborhood Hits 31
SwissProt Accessions Q5SF07, Q3TCU4, Q7TQF9 Gene names Igf2bp2, Imp2
Domain
Architecture

No domain graphic available

Description Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2).
FUBP1_HUMAN
 
θ value 2.43908e-13 (rank : 16) NC score 0.616173 (rank : 16)
Query Neighborhood Hits 45 Target Neighborhood Hits 136 Shared Neighborhood Hits 32
SwissProt Accessions Q96AE4, Q12828 Gene names FUBP1
Domain
Architecture
Description Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP) (DNA helicase V) (HDH V).
NOVA2_HUMAN
 
θ value 2.43908e-13 (rank : 17) NC score 0.772494 (rank : 12)
Query Neighborhood Hits 45 Target Neighborhood Hits 51 Shared Neighborhood Hits 31
SwissProt Accessions Q9UNW9, O43267, Q9UEA1 Gene names NOVA2, ANOVA, NOVA3
Domain
Architecture
Description RNA-binding protein Nova-2 (Neuro-oncological ventral antigen 2) (Astrocytic NOVA1-like RNA-binding protein).
IF2B2_HUMAN
 
θ value 4.16044e-13 (rank : 18) NC score 0.605185 (rank : 17)
Query Neighborhood Hits 45 Target Neighborhood Hits 142 Shared Neighborhood Hits 31
SwissProt Accessions Q9Y6M1 Gene names IGF2BP2, IMP2
Domain
Architecture

No domain graphic available

Description Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62).
TDRKH_HUMAN
 
θ value 1.99992e-07 (rank : 19) NC score 0.457474 (rank : 19)
Query Neighborhood Hits 45 Target Neighborhood Hits 59 Shared Neighborhood Hits 29
SwissProt Accessions Q9Y2W6, Q8N582, Q9NYV5 Gene names TDRKH, TDRD2
Domain
Architecture
Description Tudor and KH domain-containing protein.
TDRKH_MOUSE
 
θ value 4.45536e-07 (rank : 20) NC score 0.455145 (rank : 20)
Query Neighborhood Hits 45 Target Neighborhood Hits 59 Shared Neighborhood Hits 28
SwissProt Accessions Q80VL1 Gene names Tdrkh
Domain
Architecture
Description Tudor and KH domain-containing protein.
VIGLN_MOUSE
 
θ value 2.44474e-05 (rank : 21) NC score 0.374297 (rank : 21)
Query Neighborhood Hits 45 Target Neighborhood Hits 80 Shared Neighborhood Hits 26
SwissProt Accessions Q8VDJ3 Gene names Hdlbp
Domain
Architecture
Description Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).
VIGLN_HUMAN
 
θ value 3.19293e-05 (rank : 22) NC score 0.374170 (rank : 22)
Query Neighborhood Hits 45 Target Neighborhood Hits 71 Shared Neighborhood Hits 26
SwissProt Accessions Q00341, Q9UCY3 Gene names HDLBP, HBP, VGL
Domain
Architecture
Description Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).
SMCA4_HUMAN
 
θ value 0.0330416 (rank : 23) NC score 0.020939 (rank : 37)
Query Neighborhood Hits 45 Target Neighborhood Hits 597 Shared Neighborhood Hits 4
SwissProt Accessions P51532, O95052, Q9HBD3 Gene names SMARCA4, BRG1, SNF2B, SNF2L4
Domain
Architecture
Description Probable global transcription activator SNF2L4 (EC 3.6.1.-) (ATP- dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4).
AKAP1_HUMAN
 
θ value 0.163984 (rank : 24) NC score 0.216387 (rank : 23)
Query Neighborhood Hits 45 Target Neighborhood Hits 88 Shared Neighborhood Hits 25
SwissProt Accessions Q92667, Q13320, Q9BW14 Gene names AKAP1, AKAP149
Domain
Architecture
Description A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein 84) (S-AKAP84).
AKAP1_MOUSE
 
θ value 0.21417 (rank : 25) NC score 0.202345 (rank : 25)
Query Neighborhood Hits 45 Target Neighborhood Hits 198 Shared Neighborhood Hits 25
SwissProt Accessions O08715, O08714, P97488 Gene names Akap1, Akap
Domain
Architecture
Description A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP).
FXR2_HUMAN
 
θ value 0.62314 (rank : 26) NC score 0.104613 (rank : 28)
Query Neighborhood Hits 45 Target Neighborhood Hits 77 Shared Neighborhood Hits 24
SwissProt Accessions P51116, Q8WUM2 Gene names FXR2
Domain
Architecture
Description Fragile X mental retardation syndrome-related protein 2.
SAM68_HUMAN
 
θ value 0.62314 (rank : 27) NC score 0.138829 (rank : 26)
Query Neighborhood Hits 45 Target Neighborhood Hits 68 Shared Neighborhood Hits 19
SwissProt Accessions Q07666, Q6PJX7, Q8NB97, Q99760 Gene names KHDRBS1, SAM68
Domain
Architecture

No domain graphic available

Description KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).
SAM68_MOUSE
 
θ value 0.62314 (rank : 28) NC score 0.136485 (rank : 27)
Query Neighborhood Hits 45 Target Neighborhood Hits 65 Shared Neighborhood Hits 19
SwissProt Accessions Q60749, Q3U8T3, Q60735, Q99M33 Gene names Khdrbs1
Domain
Architecture

No domain graphic available

Description KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).
DDX43_HUMAN
 
θ value 0.813845 (rank : 29) NC score 0.044676 (rank : 35)
Query Neighborhood Hits 45 Target Neighborhood Hits 120 Shared Neighborhood Hits 20
SwissProt Accessions Q9NXZ2, Q6NXR1 Gene names DDX43, HAGE
Domain
Architecture

No domain graphic available

Description Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen).
DDX53_HUMAN
 
θ value 0.813845 (rank : 30) NC score 0.058084 (rank : 33)
Query Neighborhood Hits 45 Target Neighborhood Hits 124 Shared Neighborhood Hits 24
SwissProt Accessions Q86TM3, Q6NVV4 Gene names DDX53, CAGE
Domain
Architecture

No domain graphic available

Description Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-) (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein).
SH2D3_HUMAN
 
θ value 1.38821 (rank : 31) NC score 0.018260 (rank : 38)
Query Neighborhood Hits 45 Target Neighborhood Hits 188 Shared Neighborhood Hits 3
SwissProt Accessions Q8N5H7, Q5HYE5, Q6UY42, Q8N6X3, Q9Y2X5 Gene names SH2D3C, NSP3
Domain
Architecture

No domain graphic available

Description SH2 domain-containing protein 3C (Novel SH2-containing protein 3).
ARI1A_HUMAN
 
θ value 3.0926 (rank : 32) NC score 0.011456 (rank : 40)
Query Neighborhood Hits 45 Target Neighborhood Hits 787 Shared Neighborhood Hits 5
SwissProt Accessions O14497, Q53FK9, Q5T0W1, Q5T0W2, Q5T0W3, Q8NFD6, Q96T89, Q9BY33, Q9HBJ5, Q9UPZ1 Gene names ARID1A, C1orf4, OSA1, SMARCF1
Domain
Architecture
Description AT-rich interactive domain-containing protein 1A (ARID domain- containing protein 1A) (SWI/SNF-related, matrix-associated, actin- dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like protein) (Osa homolog 1) (hOSA1) (hELD) (BRG1-associated factor 250) (BAF250) (BRG1-associated factor 250a) (BAF250A).
LRP1B_MOUSE
 
θ value 3.0926 (rank : 33) NC score 0.005994 (rank : 46)
Query Neighborhood Hits 45 Target Neighborhood Hits 606 Shared Neighborhood Hits 4
SwissProt Accessions Q9JI18, Q8BZD3, Q8BZM7 Gene names Lrp1b, Lrpdit
Domain
Architecture
Description Low-density lipoprotein receptor-related protein 1B precursor (Low- density lipoprotein receptor-related protein-deleted in tumor) (LRP- DIT).
CSTN1_MOUSE
 
θ value 4.03905 (rank : 34) NC score 0.008915 (rank : 43)
Query Neighborhood Hits 45 Target Neighborhood Hits 175 Shared Neighborhood Hits 3
SwissProt Accessions Q9EPL2 Gene names Clstn1, Cs1, Cstn1
Domain
Architecture
Description Calsyntenin-1 precursor.
PDE3A_MOUSE
 
θ value 4.03905 (rank : 35) NC score 0.014713 (rank : 39)
Query Neighborhood Hits 45 Target Neighborhood Hits 115 Shared Neighborhood Hits 5
SwissProt Accessions Q9Z0X4 Gene names Pde3a
Domain
Architecture
Description cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A).
FXR1_HUMAN
 
θ value 5.27518 (rank : 36) NC score 0.099126 (rank : 29)
Query Neighborhood Hits 45 Target Neighborhood Hits 50 Shared Neighborhood Hits 28
SwissProt Accessions P51114, Q7Z450, Q8N6R8 Gene names FXR1
Domain
Architecture
Description Fragile X mental retardation syndrome-related protein 1 (hFXR1P).
FXR1_MOUSE
 
θ value 5.27518 (rank : 37) NC score 0.097033 (rank : 30)
Query Neighborhood Hits 45 Target Neighborhood Hits 49 Shared Neighborhood Hits 28
SwissProt Accessions Q61584, Q8VCU4, Q9R1E2, Q9R1E3, Q9R1E4, Q9R1E5, Q9WUA7, Q9WUA8, Q9WUA9 Gene names Fxr1, Fxr1h
Domain
Architecture
Description Fragile X mental retardation syndrome-related protein 1 (mFxr1p).
LRP1B_HUMAN
 
θ value 5.27518 (rank : 38) NC score 0.005140 (rank : 47)
Query Neighborhood Hits 45 Target Neighborhood Hits 602 Shared Neighborhood Hits 4
SwissProt Accessions Q9NZR2, Q8WY29, Q8WY30, Q8WY31 Gene names LRP1B, LRPDIT
Domain
Architecture
Description Low-density lipoprotein receptor-related protein 1B precursor (Low- density lipoprotein receptor-related protein-deleted in tumor) (LRP- DIT).
UBXD1_HUMAN
 
θ value 5.27518 (rank : 39) NC score 0.024481 (rank : 36)
Query Neighborhood Hits 45 Target Neighborhood Hits 41 Shared Neighborhood Hits 5
SwissProt Accessions Q9BZV1, Q96AH1, Q96IK9, Q9BZV0 Gene names UBXD1, UBXDC2
Domain
Architecture
Description UBX domain-containing protein 1.
WASIP_MOUSE
 
θ value 5.27518 (rank : 40) NC score 0.010633 (rank : 41)
Query Neighborhood Hits 45 Target Neighborhood Hits 392 Shared Neighborhood Hits 4
SwissProt Accessions Q8K1I7, Q3U0U8 Gene names Waspip, Wip
Domain
Architecture

No domain graphic available

Description Wiskott-Aldrich syndrome protein-interacting protein (WASP-interacting protein).
FXR2_MOUSE
 
θ value 6.88961 (rank : 41) NC score 0.054537 (rank : 34)
Query Neighborhood Hits 45 Target Neighborhood Hits 66 Shared Neighborhood Hits 15
SwissProt Accessions Q9WVR4, Q9WVR5 Gene names Fxr2, Fxr2h
Domain
Architecture
Description Fragile X mental retardation syndrome-related protein 2.
PO6F2_MOUSE
 
θ value 6.88961 (rank : 42) NC score 0.009725 (rank : 42)
Query Neighborhood Hits 45 Target Neighborhood Hits 639 Shared Neighborhood Hits 5
SwissProt Accessions Q8BJI4 Gene names Pou6f2
Domain
Architecture

No domain graphic available

Description POU domain, class 6, transcription factor 2.
DNL3_HUMAN
 
θ value 8.99809 (rank : 43) NC score 0.006137 (rank : 45)
Query Neighborhood Hits 45 Target Neighborhood Hits 49 Shared Neighborhood Hits 2
SwissProt Accessions P49916, Q16714 Gene names LIG3
Domain
Architecture
Description DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3).
WT1_HUMAN
 
θ value 8.99809 (rank : 44) NC score -0.002260 (rank : 48)
Query Neighborhood Hits 45 Target Neighborhood Hits 720 Shared Neighborhood Hits 3
SwissProt Accessions P19544, Q15881, Q16256, Q16575, Q8IYZ5 Gene names WT1
Domain
Architecture
Description Wilms' tumor protein (WT33).
ZCH14_MOUSE
 
θ value 8.99809 (rank : 45) NC score 0.007194 (rank : 44)
Query Neighborhood Hits 45 Target Neighborhood Hits 109 Shared Neighborhood Hits 2
SwissProt Accessions Q8VIG0, Q80TX3, Q91VU4 Gene names Zcchc14, Kiaa0579
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 14 (BDG-29).
FMR1_HUMAN
 
θ value θ > 10 (rank : 46) NC score 0.063723 (rank : 31)
Query Neighborhood Hits 45 Target Neighborhood Hits 45 Shared Neighborhood Hits 22
SwissProt Accessions Q06787, Q16578, Q99054 Gene names FMR1
Domain
Architecture
Description Fragile X mental retardation 1 protein (Protein FMR-1) (FMRP).
FMR1_MOUSE
 
θ value θ > 10 (rank : 47) NC score 0.062512 (rank : 32)
Query Neighborhood Hits 45 Target Neighborhood Hits 47 Shared Neighborhood Hits 22
SwissProt Accessions P35922 Gene names Fmr1, Fmr-1
Domain
Architecture
Description Fragile X mental retardation protein 1 homolog (Protein FMR-1) (FMRP) (mFmr1p).
RKHD1_HUMAN
 
θ value θ > 10 (rank : 48) NC score 0.212942 (rank : 24)
Query Neighborhood Hits 45 Target Neighborhood Hits 163 Shared Neighborhood Hits 23
SwissProt Accessions Q86XN8 Gene names RKHD1, KIAA2031
Domain
Architecture
Description RING finger and KH domain-containing protein 1.

Hits sorted by NC score


PCBP2_HUMAN
 
NC score 0.999962 (rank : 1) θ value 0 (rank : 1)
Query Neighborhood Hits 45 Target Neighborhood Hits 45 Shared Neighborhood Hits 45
SwissProt Accessions Q15366, Q6PKG5 Gene names PCBP2
Domain
Architecture
Description Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2).
PCBP2_MOUSE
 
NC score 0.999586 (rank : 2) θ value 0 (rank : 2)
Query Neighborhood Hits 45 Target Neighborhood Hits 47 Shared Neighborhood Hits 43
SwissProt Accessions Q61990, Q61383, Q62042 Gene names Pcbp2, Cbp, Hnrnpx, Hnrpx
Domain
Architecture
Description Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribonucleoprotein X) (hnRNP X) (CTBP) (CBP).
PCBP1_HUMAN
 
NC score 0.996587 (rank : 3) θ value 2.41524e-162 (rank : 3)
Query Neighborhood Hits 45 Target Neighborhood Hits 37 Shared Neighborhood Hits 32
SwissProt Accessions Q15365, Q13157, Q14975 Gene names PCBP1
Domain
Architecture
Description Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1) (Nucleic acid- binding protein SUB2.3).
PCBP1_MOUSE
 
NC score 0.996587 (rank : 4) θ value 2.41524e-162 (rank : 4)
Query Neighborhood Hits 45 Target Neighborhood Hits 37 Shared Neighborhood Hits 32
SwissProt Accessions P60335 Gene names Pcbp1
Domain
Architecture
Description Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1).
PCBP3_MOUSE
 
NC score 0.987864 (rank : 5) θ value 3.28708e-135 (rank : 6)
Query Neighborhood Hits 45 Target Neighborhood Hits 48 Shared Neighborhood Hits 33
SwissProt Accessions P57722, Q8BSB0, Q8C544 Gene names Pcbp3
Domain
Architecture
Description Poly(rC)-binding protein 3 (Alpha-CP3).
PCBP3_HUMAN
 
NC score 0.987842 (rank : 6) θ value 3.28708e-135 (rank : 5)
Query Neighborhood Hits 45 Target Neighborhood Hits 48 Shared Neighborhood Hits 33
SwissProt Accessions P57721, Q8N9K6, Q96EP6 Gene names PCBP3
Domain
Architecture
Description Poly(rC)-binding protein 3 (Alpha-CP3).
PCBP4_MOUSE
 
NC score 0.979357 (rank : 7) θ value 1.49272e-95 (rank : 7)
Query Neighborhood Hits 45 Target Neighborhood Hits 46 Shared Neighborhood Hits 30
SwissProt Accessions P57724, Q91VR3 Gene names Pcbp4
Domain
Architecture
Description Poly(rC)-binding protein 4 (Alpha-CP4).
PCBP4_HUMAN
 
NC score 0.977419 (rank : 8) θ value 9.6755e-95 (rank : 8)
Query Neighborhood Hits 45 Target Neighborhood Hits 49 Shared Neighborhood Hits 30
SwissProt Accessions P57723, Q96AH7 Gene names PCBP4
Domain
Architecture
Description Poly(rC)-binding protein 4 (Alpha-CP4).
HNRPK_HUMAN
 
NC score 0.865185 (rank : 9) θ value 1.08726e-37 (rank : 9)
Query Neighborhood Hits 45 Target Neighborhood Hits 45 Shared Neighborhood Hits 30
SwissProt Accessions P61978, Q07244, Q15671, Q60577, Q922Y7, Q96J62 Gene names HNRPK, HNRNPK
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein K (hnRNP K) (Transformation up-regulated nuclear protein) (TUNP).
HNRPK_MOUSE
 
NC score 0.865185 (rank : 10) θ value 1.08726e-37 (rank : 10)
Query Neighborhood Hits 45 Target Neighborhood Hits 45 Shared Neighborhood Hits 30
SwissProt Accessions P61979, Q07244, Q15671, Q60577, Q8BGQ8, Q922Y7, Q96J62 Gene names Hnrpk, Hnrnpk
Domain
Architecture
Description Heterogeneous nuclear ribonucleoprotein K.
NOVA1_HUMAN
 
NC score 0.778606 (rank : 11) θ value 5.42112e-21 (rank : 11)
Query Neighborhood Hits 45 Target Neighborhood Hits 50 Shared Neighborhood Hits 30
SwissProt Accessions P51513 Gene names NOVA1
Domain
Architecture
Description RNA-binding protein Nova-1 (Neuro-oncological ventral antigen 1) (Onconeural ventral antigen 1) (Paraneoplastic Ri antigen) (Ventral neuron-specific protein 1).
NOVA2_HUMAN
 
NC score 0.772494 (rank : 12) θ value 2.43908e-13 (rank : 17)
Query Neighborhood Hits 45 Target Neighborhood Hits 51 Shared Neighborhood Hits 31
SwissProt Accessions Q9UNW9, O43267, Q9UEA1 Gene names NOVA2, ANOVA, NOVA3
Domain
Architecture
Description RNA-binding protein Nova-2 (Neuro-oncological ventral antigen 2) (Astrocytic NOVA1-like RNA-binding protein).
FUBP3_HUMAN
 
NC score 0.664398 (rank : 13) θ value 1.058e-16 (rank : 12)
Query Neighborhood Hits 45 Target Neighborhood Hits 68 Shared Neighborhood Hits 31
SwissProt Accessions Q96I24, Q92946, Q9BVB6 Gene names FUBP3
Domain
Architecture
Description Far upstream element-binding protein 3 (FUSE-binding protein 3).
FUBP2_HUMAN
 
NC score 0.633333 (rank : 14) θ value 2.88119e-14 (rank : 13)
Query Neighborhood Hits 45 Target Neighborhood Hits 145 Shared Neighborhood Hits 32
SwissProt Accessions Q92945, O00301, Q9UNT5, Q9UQH5 Gene names KHSRP, FUBP2
Domain
Architecture
Description Far upstream element-binding protein 2 (FUSE-binding protein 2) (KH type-splicing regulatory protein) (KSRP) (p75).
FUBP1_MOUSE
 
NC score 0.617258 (rank : 15) θ value 6.41864e-14 (rank : 14)
Query Neighborhood Hits 45 Target Neighborhood Hits 144 Shared Neighborhood Hits 32
SwissProt Accessions Q91WJ8, Q8C0Y8 Gene names Fubp1, D3Ertd330e
Domain
Architecture
Description Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP).
FUBP1_HUMAN
 
NC score 0.616173 (rank : 16) θ value 2.43908e-13 (rank : 16)
Query Neighborhood Hits 45 Target Neighborhood Hits 136 Shared Neighborhood Hits 32
SwissProt Accessions Q96AE4, Q12828 Gene names FUBP1
Domain
Architecture
Description Far upstream element-binding protein 1 (FUSE-binding protein 1) (FBP) (DNA helicase V) (HDH V).
IF2B2_HUMAN
 
NC score 0.605185 (rank : 17) θ value 4.16044e-13 (rank : 18)
Query Neighborhood Hits 45 Target Neighborhood Hits 142 Shared Neighborhood Hits 31
SwissProt Accessions Q9Y6M1 Gene names IGF2BP2, IMP2
Domain
Architecture

No domain graphic available

Description Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62).
IF2B2_MOUSE
 
NC score 0.602376 (rank : 18) θ value 8.38298e-14 (rank : 15)
Query Neighborhood Hits 45 Target Neighborhood Hits 148 Shared Neighborhood Hits 31
SwissProt Accessions Q5SF07, Q3TCU4, Q7TQF9 Gene names Igf2bp2, Imp2
Domain
Architecture

No domain graphic available

Description Insulin-like growth factor 2 mRNA-binding protein 2 (IGF-II mRNA- binding protein 2) (IMP-2).
TDRKH_HUMAN
 
NC score 0.457474 (rank : 19) θ value 1.99992e-07 (rank : 19)
Query Neighborhood Hits 45 Target Neighborhood Hits 59 Shared Neighborhood Hits 29
SwissProt Accessions Q9Y2W6, Q8N582, Q9NYV5 Gene names TDRKH, TDRD2
Domain
Architecture
Description Tudor and KH domain-containing protein.
TDRKH_MOUSE
 
NC score 0.455145 (rank : 20) θ value 4.45536e-07 (rank : 20)
Query Neighborhood Hits 45 Target Neighborhood Hits 59 Shared Neighborhood Hits 28
SwissProt Accessions Q80VL1 Gene names Tdrkh
Domain
Architecture
Description Tudor and KH domain-containing protein.
VIGLN_MOUSE
 
NC score 0.374297 (rank : 21) θ value 2.44474e-05 (rank : 21)
Query Neighborhood Hits 45 Target Neighborhood Hits 80 Shared Neighborhood Hits 26
SwissProt Accessions Q8VDJ3 Gene names Hdlbp
Domain
Architecture
Description Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).
VIGLN_HUMAN
 
NC score 0.374170 (rank : 22) θ value 3.19293e-05 (rank : 22)
Query Neighborhood Hits 45 Target Neighborhood Hits 71 Shared Neighborhood Hits 26
SwissProt Accessions Q00341, Q9UCY3 Gene names HDLBP, HBP, VGL
Domain
Architecture
Description Vigilin (High density lipoprotein-binding protein) (HDL-binding protein).
AKAP1_HUMAN
 
NC score 0.216387 (rank : 23) θ value 0.163984 (rank : 24)
Query Neighborhood Hits 45 Target Neighborhood Hits 88 Shared Neighborhood Hits 25
SwissProt Accessions Q92667, Q13320, Q9BW14 Gene names AKAP1, AKAP149
Domain
Architecture
Description A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein 84) (S-AKAP84).
RKHD1_HUMAN
 
NC score 0.212942 (rank : 24) θ value θ > 10 (rank : 48)
Query Neighborhood Hits 45 Target Neighborhood Hits 163 Shared Neighborhood Hits 23
SwissProt Accessions Q86XN8 Gene names RKHD1, KIAA2031
Domain
Architecture
Description RING finger and KH domain-containing protein 1.
AKAP1_MOUSE
 
NC score 0.202345 (rank : 25) θ value 0.21417 (rank : 25)
Query Neighborhood Hits 45 Target Neighborhood Hits 198 Shared Neighborhood Hits 25
SwissProt Accessions O08715, O08714, P97488 Gene names Akap1, Akap
Domain
Architecture
Description A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP).
SAM68_HUMAN
 
NC score 0.138829 (rank : 26) θ value 0.62314 (rank : 27)
Query Neighborhood Hits 45 Target Neighborhood Hits 68 Shared Neighborhood Hits 19
SwissProt Accessions Q07666, Q6PJX7, Q8NB97, Q99760 Gene names KHDRBS1, SAM68
Domain
Architecture

No domain graphic available

Description KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).
SAM68_MOUSE
 
NC score 0.136485 (rank : 27) θ value 0.62314 (rank : 28)
Query Neighborhood Hits 45 Target Neighborhood Hits 65 Shared Neighborhood Hits 19
SwissProt Accessions Q60749, Q3U8T3, Q60735, Q99M33 Gene names Khdrbs1
Domain
Architecture

No domain graphic available

Description KH domain-containing, RNA-binding, signal transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP- associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68).
FXR2_HUMAN
 
NC score 0.104613 (rank : 28) θ value 0.62314 (rank : 26)
Query Neighborhood Hits 45 Target Neighborhood Hits 77 Shared Neighborhood Hits 24
SwissProt Accessions P51116, Q8WUM2 Gene names FXR2
Domain
Architecture
Description Fragile X mental retardation syndrome-related protein 2.
FXR1_HUMAN
 
NC score 0.099126 (rank : 29) θ value 5.27518 (rank : 36)
Query Neighborhood Hits 45 Target Neighborhood Hits 50 Shared Neighborhood Hits 28
SwissProt Accessions P51114, Q7Z450, Q8N6R8 Gene names FXR1
Domain
Architecture
Description Fragile X mental retardation syndrome-related protein 1 (hFXR1P).
FXR1_MOUSE
 
NC score 0.097033 (rank : 30) θ value 5.27518 (rank : 37)
Query Neighborhood Hits 45 Target Neighborhood Hits 49 Shared Neighborhood Hits 28
SwissProt Accessions Q61584, Q8VCU4, Q9R1E2, Q9R1E3, Q9R1E4, Q9R1E5, Q9WUA7, Q9WUA8, Q9WUA9 Gene names Fxr1, Fxr1h
Domain
Architecture
Description Fragile X mental retardation syndrome-related protein 1 (mFxr1p).
FMR1_HUMAN
 
NC score 0.063723 (rank : 31) θ value θ > 10 (rank : 46)
Query Neighborhood Hits 45 Target Neighborhood Hits 45 Shared Neighborhood Hits 22
SwissProt Accessions Q06787, Q16578, Q99054 Gene names FMR1
Domain
Architecture
Description Fragile X mental retardation 1 protein (Protein FMR-1) (FMRP).
FMR1_MOUSE
 
NC score 0.062512 (rank : 32) θ value θ > 10 (rank : 47)
Query Neighborhood Hits 45 Target Neighborhood Hits 47 Shared Neighborhood Hits 22
SwissProt Accessions P35922 Gene names Fmr1, Fmr-1
Domain
Architecture
Description Fragile X mental retardation protein 1 homolog (Protein FMR-1) (FMRP) (mFmr1p).
DDX53_HUMAN
 
NC score 0.058084 (rank : 33) θ value 0.813845 (rank : 30)
Query Neighborhood Hits 45 Target Neighborhood Hits 124 Shared Neighborhood Hits 24
SwissProt Accessions Q86TM3, Q6NVV4 Gene names DDX53, CAGE
Domain
Architecture

No domain graphic available

Description Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-) (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein).
FXR2_MOUSE
 
NC score 0.054537 (rank : 34) θ value 6.88961 (rank : 41)
Query Neighborhood Hits 45 Target Neighborhood Hits 66 Shared Neighborhood Hits 15
SwissProt Accessions Q9WVR4, Q9WVR5 Gene names Fxr2, Fxr2h
Domain
Architecture
Description Fragile X mental retardation syndrome-related protein 2.
DDX43_HUMAN
 
NC score 0.044676 (rank : 35) θ value 0.813845 (rank : 29)
Query Neighborhood Hits 45 Target Neighborhood Hits 120 Shared Neighborhood Hits 20
SwissProt Accessions Q9NXZ2, Q6NXR1 Gene names DDX43, HAGE
Domain
Architecture

No domain graphic available

Description Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen).
UBXD1_HUMAN
 
NC score 0.024481 (rank : 36) θ value 5.27518 (rank : 39)
Query Neighborhood Hits 45 Target Neighborhood Hits 41 Shared Neighborhood Hits 5
SwissProt Accessions Q9BZV1, Q96AH1, Q96IK9, Q9BZV0 Gene names UBXD1, UBXDC2
Domain
Architecture
Description UBX domain-containing protein 1.
SMCA4_HUMAN
 
NC score 0.020939 (rank : 37) θ value 0.0330416 (rank : 23)
Query Neighborhood Hits 45 Target Neighborhood Hits 597 Shared Neighborhood Hits 4
SwissProt Accessions P51532, O95052, Q9HBD3 Gene names SMARCA4, BRG1, SNF2B, SNF2L4
Domain
Architecture
Description Probable global transcription activator SNF2L4 (EC 3.6.1.-) (ATP- dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4).
SH2D3_HUMAN
 
NC score 0.018260 (rank : 38) θ value 1.38821 (rank : 31)
Query Neighborhood Hits 45 Target Neighborhood Hits 188 Shared Neighborhood Hits 3
SwissProt Accessions Q8N5H7, Q5HYE5, Q6UY42, Q8N6X3, Q9Y2X5 Gene names SH2D3C, NSP3
Domain
Architecture

No domain graphic available

Description SH2 domain-containing protein 3C (Novel SH2-containing protein 3).
PDE3A_MOUSE
 
NC score 0.014713 (rank : 39) θ value 4.03905 (rank : 35)
Query Neighborhood Hits 45 Target Neighborhood Hits 115 Shared Neighborhood Hits 5
SwissProt Accessions Q9Z0X4 Gene names Pde3a
Domain
Architecture
Description cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A).
ARI1A_HUMAN
 
NC score 0.011456 (rank : 40) θ value 3.0926 (rank : 32)
Query Neighborhood Hits 45 Target Neighborhood Hits 787 Shared Neighborhood Hits 5
SwissProt Accessions O14497, Q53FK9, Q5T0W1, Q5T0W2, Q5T0W3, Q8NFD6, Q96T89, Q9BY33, Q9HBJ5, Q9UPZ1 Gene names ARID1A, C1orf4, OSA1, SMARCF1
Domain
Architecture
Description AT-rich interactive domain-containing protein 1A (ARID domain- containing protein 1A) (SWI/SNF-related, matrix-associated, actin- dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like protein) (Osa homolog 1) (hOSA1) (hELD) (BRG1-associated factor 250) (BAF250) (BRG1-associated factor 250a) (BAF250A).
WASIP_MOUSE
 
NC score 0.010633 (rank : 41) θ value 5.27518 (rank : 40)
Query Neighborhood Hits 45 Target Neighborhood Hits 392 Shared Neighborhood Hits 4
SwissProt Accessions Q8K1I7, Q3U0U8 Gene names Waspip, Wip
Domain
Architecture

No domain graphic available

Description Wiskott-Aldrich syndrome protein-interacting protein (WASP-interacting protein).
PO6F2_MOUSE
 
NC score 0.009725 (rank : 42) θ value 6.88961 (rank : 42)
Query Neighborhood Hits 45 Target Neighborhood Hits 639 Shared Neighborhood Hits 5
SwissProt Accessions Q8BJI4 Gene names Pou6f2
Domain
Architecture

No domain graphic available

Description POU domain, class 6, transcription factor 2.
CSTN1_MOUSE
 
NC score 0.008915 (rank : 43) θ value 4.03905 (rank : 34)
Query Neighborhood Hits 45 Target Neighborhood Hits 175 Shared Neighborhood Hits 3
SwissProt Accessions Q9EPL2 Gene names Clstn1, Cs1, Cstn1
Domain
Architecture
Description Calsyntenin-1 precursor.
ZCH14_MOUSE
 
NC score 0.007194 (rank : 44) θ value 8.99809 (rank : 45)
Query Neighborhood Hits 45 Target Neighborhood Hits 109 Shared Neighborhood Hits 2
SwissProt Accessions Q8VIG0, Q80TX3, Q91VU4 Gene names Zcchc14, Kiaa0579
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 14 (BDG-29).
DNL3_HUMAN
 
NC score 0.006137 (rank : 45) θ value 8.99809 (rank : 43)
Query Neighborhood Hits 45 Target Neighborhood Hits 49 Shared Neighborhood Hits 2
SwissProt Accessions P49916, Q16714 Gene names LIG3
Domain
Architecture
Description DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (Polydeoxyribonucleotide synthase [ATP] 3).
LRP1B_MOUSE
 
NC score 0.005994 (rank : 46) θ value 3.0926 (rank : 33)
Query Neighborhood Hits 45 Target Neighborhood Hits 606 Shared Neighborhood Hits 4
SwissProt Accessions Q9JI18, Q8BZD3, Q8BZM7 Gene names Lrp1b, Lrpdit
Domain
Architecture
Description Low-density lipoprotein receptor-related protein 1B precursor (Low- density lipoprotein receptor-related protein-deleted in tumor) (LRP- DIT).
LRP1B_HUMAN
 
NC score 0.005140 (rank : 47) θ value 5.27518 (rank : 38)
Query Neighborhood Hits 45 Target Neighborhood Hits 602 Shared Neighborhood Hits 4
SwissProt Accessions Q9NZR2, Q8WY29, Q8WY30, Q8WY31 Gene names LRP1B, LRPDIT
Domain
Architecture
Description Low-density lipoprotein receptor-related protein 1B precursor (Low- density lipoprotein receptor-related protein-deleted in tumor) (LRP- DIT).
WT1_HUMAN
 
NC score -0.002260 (rank : 48) θ value 8.99809 (rank : 44)
Query Neighborhood Hits 45 Target Neighborhood Hits 720 Shared Neighborhood Hits 3
SwissProt Accessions P19544, Q15881, Q16256, Q16575, Q8IYZ5 Gene names WT1
Domain
Architecture
Description Wilms' tumor protein (WT33).