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Network neighborhood for query Sequence : LN28B_MOUSE

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LN28B_MOUSE
 
SwissProt Accessions Q45KJ6, Q3UZC6, Q3V444 Gene names Lin28b
Domain
Architecture

No domain graphic available

Description Lin-28 homolog B.
Rank Plots



Hits sorted by θ


LN28B_MOUSE
 
θ value 4.88915e-147 (rank : 1) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 35 Target Neighborhood Hits 35 Shared Neighborhood Hits 35
SwissProt Accessions Q45KJ6, Q3UZC6, Q3V444 Gene names Lin28b
Domain
Architecture

No domain graphic available

Description Lin-28 homolog B.
LN28B_HUMAN
 
θ value 2.88631e-123 (rank : 2) NC score 0.985656 (rank : 2)
Query Neighborhood Hits 35 Target Neighborhood Hits 66 Shared Neighborhood Hits 31
SwissProt Accessions Q6ZN17 Gene names LIN28B, CSDD2
Domain
Architecture

No domain graphic available

Description Lin-28 homolog B.
LN28A_MOUSE
 
θ value 1.04096e-72 (rank : 3) NC score 0.982098 (rank : 3)
Query Neighborhood Hits 35 Target Neighborhood Hits 37 Shared Neighborhood Hits 27
SwissProt Accessions Q8K3Y3, Q6NV62 Gene names Lin28, Lin28a, Tex17
Domain
Architecture

No domain graphic available

Description Lin-28 homolog A (Testis-expressed protein 17).
LN28A_HUMAN
 
θ value 1.35953e-72 (rank : 4) NC score 0.982036 (rank : 4)
Query Neighborhood Hits 35 Target Neighborhood Hits 34 Shared Neighborhood Hits 27
SwissProt Accessions Q9H9Z2 Gene names LIN28, CSDD1, LIN28A, ZCCHC1
Domain
Architecture

No domain graphic available

Description Lin-28 homolog A (Zinc finger CCHC domain-containing protein 1).
YBOX2_HUMAN
 
θ value 3.89403e-11 (rank : 5) NC score 0.629703 (rank : 5)
Query Neighborhood Hits 35 Target Neighborhood Hits 50 Shared Neighborhood Hits 10
SwissProt Accessions Q9Y2T7, Q8N4P0 Gene names YBX2
Domain
Architecture

No domain graphic available

Description Y-box-binding protein 2 (Germ cell-specific Y-box-binding protein) (Contrin) (MSY2 homolog).
YBOX2_MOUSE
 
θ value 8.67504e-11 (rank : 6) NC score 0.625972 (rank : 6)
Query Neighborhood Hits 35 Target Neighborhood Hits 46 Shared Neighborhood Hits 10
SwissProt Accessions Q9Z2C8, Q5NCW8, Q5NCW9, Q9Z2C7 Gene names Ybx2, Msy2
Domain
Architecture

No domain graphic available

Description Y-box-binding protein 2 (Germ cell-specific Y-box-binding protein) (FRGY2 homolog).
YBOX1_HUMAN
 
θ value 1.9326e-10 (rank : 7) NC score 0.617394 (rank : 8)
Query Neighborhood Hits 35 Target Neighborhood Hits 34 Shared Neighborhood Hits 10
SwissProt Accessions P67809, P16990, P16991, Q14972, Q15325, Q5FVF0 Gene names YBX1, NSEP1, YB1
Domain
Architecture

No domain graphic available

Description Nuclease sensitive element-binding protein 1 (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB).
YBOX1_MOUSE
 
θ value 1.9326e-10 (rank : 8) NC score 0.619542 (rank : 7)
Query Neighborhood Hits 35 Target Neighborhood Hits 32 Shared Neighborhood Hits 10
SwissProt Accessions P62960, P22568, P27817, P43482 Gene names Ybx1, Msy-1, Msy1, Nsep1, Yb1
Domain
Architecture

No domain graphic available

Description Nuclease sensitive element-binding protein 1 (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB).
DBPA_MOUSE
 
θ value 3.29651e-10 (rank : 9) NC score 0.605583 (rank : 9)
Query Neighborhood Hits 35 Target Neighborhood Hits 64 Shared Neighborhood Hits 10
SwissProt Accessions Q9JKB3, Q80WG4, Q9EQF7, Q9EQF8 Gene names Csda, Msy4, Ybx3
Domain
Architecture

No domain graphic available

Description DNA-binding protein A (Cold shock domain-containing protein A) (Y-box protein 3).
DBPA_HUMAN
 
θ value 2.13673e-09 (rank : 10) NC score 0.602152 (rank : 10)
Query Neighborhood Hits 35 Target Neighborhood Hits 52 Shared Neighborhood Hits 10
SwissProt Accessions P16989, Q14121, Q969N6 Gene names CSDA, DBPA
Domain
Architecture
Description DNA-binding protein A (Cold shock domain-containing protein A) (Single-strand DNA-binding protein NF-GMB).
ZCH13_HUMAN
 
θ value 0.000602161 (rank : 11) NC score 0.301016 (rank : 11)
Query Neighborhood Hits 35 Target Neighborhood Hits 151 Shared Neighborhood Hits 22
SwissProt Accessions Q8WW36 Gene names ZCCHC13
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 13.
CNBP_HUMAN
 
θ value 0.0148317 (rank : 12) NC score 0.235646 (rank : 12)
Query Neighborhood Hits 35 Target Neighborhood Hits 196 Shared Neighborhood Hits 21
SwissProt Accessions P62633, P20694, Q5QJR0, Q6PJI7, Q96NV3 Gene names CNBP, ZNF9
Domain
Architecture

No domain graphic available

Description Cellular nucleic acid-binding protein (CNBP) (Zinc finger protein 9).
ZCHC7_HUMAN
 
θ value 0.0252991 (rank : 13) NC score 0.234295 (rank : 13)
Query Neighborhood Hits 35 Target Neighborhood Hits 73 Shared Neighborhood Hits 21
SwissProt Accessions Q8N3Z6, Q5T0Q8, Q5T0Q9, Q5T0R0, Q8N2M1, Q8N4J2, Q8TBK8, Q9H648, Q9P0F0 Gene names ZCCHC7
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 7.
CNBP_MOUSE
 
θ value 0.0431538 (rank : 14) NC score 0.217257 (rank : 14)
Query Neighborhood Hits 35 Target Neighborhood Hits 215 Shared Neighborhood Hits 21
SwissProt Accessions P53996, Q80Y06, Q8BP23 Gene names Cnbp, Cnbp1, Znf9
Domain
Architecture

No domain graphic available

Description Cellular nucleic acid-binding protein (CNBP) (Zinc finger protein 9).
ZCHC8_MOUSE
 
θ value 1.06291 (rank : 15) NC score 0.081472 (rank : 17)
Query Neighborhood Hits 35 Target Neighborhood Hits 134 Shared Neighborhood Hits 6
SwissProt Accessions Q9CYA6, Q3TK71, Q8CCB7, Q91WQ1 Gene names Zcchc8
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 8.
ZCHC9_HUMAN
 
θ value 1.06291 (rank : 16) NC score 0.158975 (rank : 15)
Query Neighborhood Hits 35 Target Neighborhood Hits 48 Shared Neighborhood Hits 20
SwissProt Accessions Q8N567, Q9H027 Gene names ZCCHC9
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 9.
ZCHC9_MOUSE
 
θ value 1.38821 (rank : 17) NC score 0.148471 (rank : 16)
Query Neighborhood Hits 35 Target Neighborhood Hits 50 Shared Neighborhood Hits 19
SwissProt Accessions Q8R1J3, Q921T6 Gene names Zcchc9
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 9.
GAK10_HUMAN
 
θ value 1.81305 (rank : 18) NC score 0.077738 (rank : 24)
Query Neighborhood Hits 35 Target Neighborhood Hits 289 Shared Neighborhood Hits 19
SwissProt Accessions P87889, P10263, P10264, Q69385, Q9UKH6 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_5q33.3 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K10 Gag protein) (HERV-K107 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK11_HUMAN
 
θ value 1.81305 (rank : 19) NC score 0.077827 (rank : 23)
Query Neighborhood Hits 35 Target Neighborhood Hits 409 Shared Neighborhood Hits 20
SwissProt Accessions P63145, Q9UKI1 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_22q11.21 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K101 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK12_HUMAN
 
θ value 1.81305 (rank : 20) NC score 0.078077 (rank : 20)
Query Neighborhood Hits 35 Target Neighborhood Hits 374 Shared Neighborhood Hits 20
SwissProt Accessions P63130, Q9UKI0 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_1q22 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K102 Gag protein) (HERV-K(III) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK1_HUMAN
 
θ value 1.81305 (rank : 21) NC score 0.079480 (rank : 19)
Query Neighborhood Hits 35 Target Neighborhood Hits 268 Shared Neighborhood Hits 20
SwissProt Accessions P62683 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_12q14.1 provirus ancestral Gag polyprotein (Gag polyprotein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK3_HUMAN
 
θ value 1.81305 (rank : 22) NC score 0.080900 (rank : 18)
Query Neighborhood Hits 35 Target Neighborhood Hits 182 Shared Neighborhood Hits 19
SwissProt Accessions Q9YNA8 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_19q12 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(C19) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK4_HUMAN
 
θ value 1.81305 (rank : 23) NC score 0.077882 (rank : 22)
Query Neighborhood Hits 35 Target Neighborhood Hits 415 Shared Neighborhood Hits 20
SwissProt Accessions P63126, Q9UKH4 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_6q14.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K109 Gag protein) (HERV-K(C6) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK5_HUMAN
 
θ value 1.81305 (rank : 24) NC score 0.077670 (rank : 25)
Query Neighborhood Hits 35 Target Neighborhood Hits 429 Shared Neighborhood Hits 20
SwissProt Accessions P62684 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_19p13.11 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K113 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK6_HUMAN
 
θ value 1.81305 (rank : 25) NC score 0.076792 (rank : 26)
Query Neighborhood Hits 35 Target Neighborhood Hits 392 Shared Neighborhood Hits 20
SwissProt Accessions P62685 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_8p23.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K115 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK2_HUMAN
 
θ value 2.36792 (rank : 26) NC score 0.076480 (rank : 27)
Query Neighborhood Hits 35 Target Neighborhood Hits 406 Shared Neighborhood Hits 20
SwissProt Accessions Q7LDI9, Q9UKH5, Q9Y6I1, Q9YNA6, Q9YNB0 Gene names ERVK6
Domain
Architecture

No domain graphic available

Description HERV-K_7p22.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(HML-2.HOM) Gag protein) (HERV-K108 Gag protein) (HERV-K(C7) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
FANCM_MOUSE
 
θ value 3.0926 (rank : 27) NC score 0.017309 (rank : 39)
Query Neighborhood Hits 35 Target Neighborhood Hits 177 Shared Neighborhood Hits 2
SwissProt Accessions Q8BGE5, Q69ZF5, Q8BKB7, Q8BUA8 Gene names Fancm, Kiaa1596
Domain
Architecture

No domain graphic available

Description Fanconi anemia group M protein homolog (EC 3.6.1.-) (ATP-dependent RNA helicase FANCM) (Protein FACM).
PAR3L_HUMAN
 
θ value 4.03905 (rank : 28) NC score 0.011116 (rank : 42)
Query Neighborhood Hits 35 Target Neighborhood Hits 297 Shared Neighborhood Hits 2
SwissProt Accessions Q8TEW8, Q8IUC7, Q8IUC9, Q96DK9, Q96N09, Q96NX6, Q96NX7, Q96Q29 Gene names PARD3B, ALS2CR19, PAR3B, PAR3L
Domain
Architecture
Description Partitioning-defective 3 homolog B (PAR3-beta) (Partitioning-defective 3-like protein) (PAR3-L protein) (Amyotrophic lateral sclerosis 2 chromosome region candidate gene 19 protein).
ZCHC8_HUMAN
 
θ value 4.03905 (rank : 29) NC score 0.059582 (rank : 29)
Query Neighborhood Hits 35 Target Neighborhood Hits 92 Shared Neighborhood Hits 8
SwissProt Accessions Q6NZY4, Q7L2P6, Q8N2K5, Q96SK7, Q9NSS2, Q9NSS3 Gene names ZCCHC8
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 8.
PERQ1_MOUSE
 
θ value 5.27518 (rank : 30) NC score 0.026381 (rank : 37)
Query Neighborhood Hits 35 Target Neighborhood Hits 215 Shared Neighborhood Hits 3
SwissProt Accessions Q99MR1 Gene names Perq1
Domain
Architecture
Description PERQ amino acid rich with GYF domain protein 1.
TCF19_HUMAN
 
θ value 5.27518 (rank : 31) NC score 0.034398 (rank : 35)
Query Neighborhood Hits 35 Target Neighborhood Hits 124 Shared Neighborhood Hits 3
SwissProt Accessions Q9Y242, Q13176, Q15967, Q5SQ89, Q5STD6, Q5STF5, Q9BUM2, Q9UBH7 Gene names TCF19, SC1
Domain
Architecture
Description Transcription factor 19 (Transcription factor SC1).
SETBP_MOUSE
 
θ value 6.88961 (rank : 32) NC score 0.014291 (rank : 40)
Query Neighborhood Hits 35 Target Neighborhood Hits 352 Shared Neighborhood Hits 9
SwissProt Accessions Q9Z180, Q66JL8 Gene names Setbp1, Kiaa0437
Domain
Architecture

No domain graphic available

Description SET-binding protein (SEB).
SFRS7_HUMAN
 
θ value 8.99809 (rank : 33) NC score 0.026536 (rank : 36)
Query Neighborhood Hits 35 Target Neighborhood Hits 191 Shared Neighborhood Hits 8
SwissProt Accessions Q16629 Gene names SFRS7
Domain
Architecture
Description Splicing factor, arginine/serine-rich 7 (Splicing factor 9G8).
SFRS7_MOUSE
 
θ value 8.99809 (rank : 34) NC score 0.024811 (rank : 38)
Query Neighborhood Hits 35 Target Neighborhood Hits 177 Shared Neighborhood Hits 8
SwissProt Accessions Q8BL97, Q8BMC6, Q8BUR2, Q8R2N4, Q8R3E9, Q91YS1 Gene names Sfrs7
Domain
Architecture

No domain graphic available

Description Splicing factor, arginine/serine-rich 7.
XPC_MOUSE
 
θ value 8.99809 (rank : 35) NC score 0.011991 (rank : 41)
Query Neighborhood Hits 35 Target Neighborhood Hits 75 Shared Neighborhood Hits 2
SwissProt Accessions P51612, P54732, Q3TKI2, Q920M1, Q9DBW7 Gene names Xpc
Domain
Architecture
Description DNA-repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125).
GAK15_HUMAN
 
θ value θ > 10 (rank : 36) NC score 0.051601 (rank : 34)
Query Neighborhood Hits 35 Target Neighborhood Hits 19 Shared Neighborhood Hits 9
SwissProt Accessions P62688 Gene names ERVK4
Domain
Architecture

No domain graphic available

Description HERV-K_3q21.2 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(I) Gag protein).
GAK17_HUMAN
 
θ value θ > 10 (rank : 37) NC score 0.051875 (rank : 32)
Query Neighborhood Hits 35 Target Neighborhood Hits 21 Shared Neighborhood Hits 9
SwissProt Accessions P62689 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_11q22.1 provirus ancestral Gag polyprotein (Gag polyprotein) [Contains: Matrix protein].
GAK18_HUMAN
 
θ value θ > 10 (rank : 38) NC score 0.056912 (rank : 30)
Query Neighborhood Hits 35 Target Neighborhood Hits 116 Shared Neighborhood Hits 14
SwissProt Accessions P62690 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_22q11.23 provirus ancestral Gag polyprotein (Gag polyprotein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK7_HUMAN
 
θ value θ > 10 (rank : 39) NC score 0.052898 (rank : 31)
Query Neighborhood Hits 35 Target Neighborhood Hits 90 Shared Neighborhood Hits 9
SwissProt Accessions Q96PI4, Q9QC08 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_1q23.3 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K18 Gag protein) (HERV-K110 Gag protein) (HERV-K(C1a) Gag protein) [Contains: Matrix protein].
GAK8_HUMAN
 
θ value θ > 10 (rank : 40) NC score 0.060226 (rank : 28)
Query Neighborhood Hits 35 Target Neighborhood Hits 145 Shared Neighborhood Hits 15
SwissProt Accessions Q9HDB9 Gene names ERVK5
Domain
Architecture

No domain graphic available

Description HERV-K_3q12.3 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(II) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK9_HUMAN
 
θ value θ > 10 (rank : 41) NC score 0.051797 (rank : 33)
Query Neighborhood Hits 35 Target Neighborhood Hits 22 Shared Neighborhood Hits 9
SwissProt Accessions Q9UKH8 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_5q13.3 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K104 Gag protein) [Contains: Matrix protein].
ZCHC3_HUMAN
 
θ value θ > 10 (rank : 42) NC score 0.077956 (rank : 21)
Query Neighborhood Hits 35 Target Neighborhood Hits 53 Shared Neighborhood Hits 10
SwissProt Accessions Q9NUD5, Q6NT79 Gene names ZCCHC3, C20orf99
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 3.

Hits sorted by NC score


LN28B_MOUSE
 
NC score 0.999962 (rank : 1) θ value 4.88915e-147 (rank : 1)
Query Neighborhood Hits 35 Target Neighborhood Hits 35 Shared Neighborhood Hits 35
SwissProt Accessions Q45KJ6, Q3UZC6, Q3V444 Gene names Lin28b
Domain
Architecture

No domain graphic available

Description Lin-28 homolog B.
LN28B_HUMAN
 
NC score 0.985656 (rank : 2) θ value 2.88631e-123 (rank : 2)
Query Neighborhood Hits 35 Target Neighborhood Hits 66 Shared Neighborhood Hits 31
SwissProt Accessions Q6ZN17 Gene names LIN28B, CSDD2
Domain
Architecture

No domain graphic available

Description Lin-28 homolog B.
LN28A_MOUSE
 
NC score 0.982098 (rank : 3) θ value 1.04096e-72 (rank : 3)
Query Neighborhood Hits 35 Target Neighborhood Hits 37 Shared Neighborhood Hits 27
SwissProt Accessions Q8K3Y3, Q6NV62 Gene names Lin28, Lin28a, Tex17
Domain
Architecture

No domain graphic available

Description Lin-28 homolog A (Testis-expressed protein 17).
LN28A_HUMAN
 
NC score 0.982036 (rank : 4) θ value 1.35953e-72 (rank : 4)
Query Neighborhood Hits 35 Target Neighborhood Hits 34 Shared Neighborhood Hits 27
SwissProt Accessions Q9H9Z2 Gene names LIN28, CSDD1, LIN28A, ZCCHC1
Domain
Architecture

No domain graphic available

Description Lin-28 homolog A (Zinc finger CCHC domain-containing protein 1).
YBOX2_HUMAN
 
NC score 0.629703 (rank : 5) θ value 3.89403e-11 (rank : 5)
Query Neighborhood Hits 35 Target Neighborhood Hits 50 Shared Neighborhood Hits 10
SwissProt Accessions Q9Y2T7, Q8N4P0 Gene names YBX2
Domain
Architecture

No domain graphic available

Description Y-box-binding protein 2 (Germ cell-specific Y-box-binding protein) (Contrin) (MSY2 homolog).
YBOX2_MOUSE
 
NC score 0.625972 (rank : 6) θ value 8.67504e-11 (rank : 6)
Query Neighborhood Hits 35 Target Neighborhood Hits 46 Shared Neighborhood Hits 10
SwissProt Accessions Q9Z2C8, Q5NCW8, Q5NCW9, Q9Z2C7 Gene names Ybx2, Msy2
Domain
Architecture

No domain graphic available

Description Y-box-binding protein 2 (Germ cell-specific Y-box-binding protein) (FRGY2 homolog).
YBOX1_MOUSE
 
NC score 0.619542 (rank : 7) θ value 1.9326e-10 (rank : 8)
Query Neighborhood Hits 35 Target Neighborhood Hits 32 Shared Neighborhood Hits 10
SwissProt Accessions P62960, P22568, P27817, P43482 Gene names Ybx1, Msy-1, Msy1, Nsep1, Yb1
Domain
Architecture

No domain graphic available

Description Nuclease sensitive element-binding protein 1 (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB).
YBOX1_HUMAN
 
NC score 0.617394 (rank : 8) θ value 1.9326e-10 (rank : 7)
Query Neighborhood Hits 35 Target Neighborhood Hits 34 Shared Neighborhood Hits 10
SwissProt Accessions P67809, P16990, P16991, Q14972, Q15325, Q5FVF0 Gene names YBX1, NSEP1, YB1
Domain
Architecture

No domain graphic available

Description Nuclease sensitive element-binding protein 1 (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB).
DBPA_MOUSE
 
NC score 0.605583 (rank : 9) θ value 3.29651e-10 (rank : 9)
Query Neighborhood Hits 35 Target Neighborhood Hits 64 Shared Neighborhood Hits 10
SwissProt Accessions Q9JKB3, Q80WG4, Q9EQF7, Q9EQF8 Gene names Csda, Msy4, Ybx3
Domain
Architecture

No domain graphic available

Description DNA-binding protein A (Cold shock domain-containing protein A) (Y-box protein 3).
DBPA_HUMAN
 
NC score 0.602152 (rank : 10) θ value 2.13673e-09 (rank : 10)
Query Neighborhood Hits 35 Target Neighborhood Hits 52 Shared Neighborhood Hits 10
SwissProt Accessions P16989, Q14121, Q969N6 Gene names CSDA, DBPA
Domain
Architecture
Description DNA-binding protein A (Cold shock domain-containing protein A) (Single-strand DNA-binding protein NF-GMB).
ZCH13_HUMAN
 
NC score 0.301016 (rank : 11) θ value 0.000602161 (rank : 11)
Query Neighborhood Hits 35 Target Neighborhood Hits 151 Shared Neighborhood Hits 22
SwissProt Accessions Q8WW36 Gene names ZCCHC13
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 13.
CNBP_HUMAN
 
NC score 0.235646 (rank : 12) θ value 0.0148317 (rank : 12)
Query Neighborhood Hits 35 Target Neighborhood Hits 196 Shared Neighborhood Hits 21
SwissProt Accessions P62633, P20694, Q5QJR0, Q6PJI7, Q96NV3 Gene names CNBP, ZNF9
Domain
Architecture

No domain graphic available

Description Cellular nucleic acid-binding protein (CNBP) (Zinc finger protein 9).
ZCHC7_HUMAN
 
NC score 0.234295 (rank : 13) θ value 0.0252991 (rank : 13)
Query Neighborhood Hits 35 Target Neighborhood Hits 73 Shared Neighborhood Hits 21
SwissProt Accessions Q8N3Z6, Q5T0Q8, Q5T0Q9, Q5T0R0, Q8N2M1, Q8N4J2, Q8TBK8, Q9H648, Q9P0F0 Gene names ZCCHC7
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 7.
CNBP_MOUSE
 
NC score 0.217257 (rank : 14) θ value 0.0431538 (rank : 14)
Query Neighborhood Hits 35 Target Neighborhood Hits 215 Shared Neighborhood Hits 21
SwissProt Accessions P53996, Q80Y06, Q8BP23 Gene names Cnbp, Cnbp1, Znf9
Domain
Architecture

No domain graphic available

Description Cellular nucleic acid-binding protein (CNBP) (Zinc finger protein 9).
ZCHC9_HUMAN
 
NC score 0.158975 (rank : 15) θ value 1.06291 (rank : 16)
Query Neighborhood Hits 35 Target Neighborhood Hits 48 Shared Neighborhood Hits 20
SwissProt Accessions Q8N567, Q9H027 Gene names ZCCHC9
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 9.
ZCHC9_MOUSE
 
NC score 0.148471 (rank : 16) θ value 1.38821 (rank : 17)
Query Neighborhood Hits 35 Target Neighborhood Hits 50 Shared Neighborhood Hits 19
SwissProt Accessions Q8R1J3, Q921T6 Gene names Zcchc9
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 9.
ZCHC8_MOUSE
 
NC score 0.081472 (rank : 17) θ value 1.06291 (rank : 15)
Query Neighborhood Hits 35 Target Neighborhood Hits 134 Shared Neighborhood Hits 6
SwissProt Accessions Q9CYA6, Q3TK71, Q8CCB7, Q91WQ1 Gene names Zcchc8
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 8.
GAK3_HUMAN
 
NC score 0.080900 (rank : 18) θ value 1.81305 (rank : 22)
Query Neighborhood Hits 35 Target Neighborhood Hits 182 Shared Neighborhood Hits 19
SwissProt Accessions Q9YNA8 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_19q12 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(C19) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK1_HUMAN
 
NC score 0.079480 (rank : 19) θ value 1.81305 (rank : 21)
Query Neighborhood Hits 35 Target Neighborhood Hits 268 Shared Neighborhood Hits 20
SwissProt Accessions P62683 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_12q14.1 provirus ancestral Gag polyprotein (Gag polyprotein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK12_HUMAN
 
NC score 0.078077 (rank : 20) θ value 1.81305 (rank : 20)
Query Neighborhood Hits 35 Target Neighborhood Hits 374 Shared Neighborhood Hits 20
SwissProt Accessions P63130, Q9UKI0 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_1q22 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K102 Gag protein) (HERV-K(III) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
ZCHC3_HUMAN
 
NC score 0.077956 (rank : 21) θ value θ > 10 (rank : 42)
Query Neighborhood Hits 35 Target Neighborhood Hits 53 Shared Neighborhood Hits 10
SwissProt Accessions Q9NUD5, Q6NT79 Gene names ZCCHC3, C20orf99
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 3.
GAK4_HUMAN
 
NC score 0.077882 (rank : 22) θ value 1.81305 (rank : 23)
Query Neighborhood Hits 35 Target Neighborhood Hits 415 Shared Neighborhood Hits 20
SwissProt Accessions P63126, Q9UKH4 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_6q14.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K109 Gag protein) (HERV-K(C6) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK11_HUMAN
 
NC score 0.077827 (rank : 23) θ value 1.81305 (rank : 19)
Query Neighborhood Hits 35 Target Neighborhood Hits 409 Shared Neighborhood Hits 20
SwissProt Accessions P63145, Q9UKI1 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_22q11.21 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K101 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK10_HUMAN
 
NC score 0.077738 (rank : 24) θ value 1.81305 (rank : 18)
Query Neighborhood Hits 35 Target Neighborhood Hits 289 Shared Neighborhood Hits 19
SwissProt Accessions P87889, P10263, P10264, Q69385, Q9UKH6 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_5q33.3 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K10 Gag protein) (HERV-K107 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK5_HUMAN
 
NC score 0.077670 (rank : 25) θ value 1.81305 (rank : 24)
Query Neighborhood Hits 35 Target Neighborhood Hits 429 Shared Neighborhood Hits 20
SwissProt Accessions P62684 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_19p13.11 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K113 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK6_HUMAN
 
NC score 0.076792 (rank : 26) θ value 1.81305 (rank : 25)
Query Neighborhood Hits 35 Target Neighborhood Hits 392 Shared Neighborhood Hits 20
SwissProt Accessions P62685 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_8p23.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K115 Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK2_HUMAN
 
NC score 0.076480 (rank : 27) θ value 2.36792 (rank : 26)
Query Neighborhood Hits 35 Target Neighborhood Hits 406 Shared Neighborhood Hits 20
SwissProt Accessions Q7LDI9, Q9UKH5, Q9Y6I1, Q9YNA6, Q9YNB0 Gene names ERVK6
Domain
Architecture

No domain graphic available

Description HERV-K_7p22.1 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(HML-2.HOM) Gag protein) (HERV-K108 Gag protein) (HERV-K(C7) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK8_HUMAN
 
NC score 0.060226 (rank : 28) θ value θ > 10 (rank : 40)
Query Neighborhood Hits 35 Target Neighborhood Hits 145 Shared Neighborhood Hits 15
SwissProt Accessions Q9HDB9 Gene names ERVK5
Domain
Architecture

No domain graphic available

Description HERV-K_3q12.3 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(II) Gag protein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
ZCHC8_HUMAN
 
NC score 0.059582 (rank : 29) θ value 4.03905 (rank : 29)
Query Neighborhood Hits 35 Target Neighborhood Hits 92 Shared Neighborhood Hits 8
SwissProt Accessions Q6NZY4, Q7L2P6, Q8N2K5, Q96SK7, Q9NSS2, Q9NSS3 Gene names ZCCHC8
Domain
Architecture

No domain graphic available

Description Zinc finger CCHC domain-containing protein 8.
GAK18_HUMAN
 
NC score 0.056912 (rank : 30) θ value θ > 10 (rank : 38)
Query Neighborhood Hits 35 Target Neighborhood Hits 116 Shared Neighborhood Hits 14
SwissProt Accessions P62690 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_22q11.23 provirus ancestral Gag polyprotein (Gag polyprotein) [Contains: Matrix protein; Capsid protein; Nucleocapsid protein].
GAK7_HUMAN
 
NC score 0.052898 (rank : 31) θ value θ > 10 (rank : 39)
Query Neighborhood Hits 35 Target Neighborhood Hits 90 Shared Neighborhood Hits 9
SwissProt Accessions Q96PI4, Q9QC08 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_1q23.3 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K18 Gag protein) (HERV-K110 Gag protein) (HERV-K(C1a) Gag protein) [Contains: Matrix protein].
GAK17_HUMAN
 
NC score 0.051875 (rank : 32) θ value θ > 10 (rank : 37)
Query Neighborhood Hits 35 Target Neighborhood Hits 21 Shared Neighborhood Hits 9
SwissProt Accessions P62689 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_11q22.1 provirus ancestral Gag polyprotein (Gag polyprotein) [Contains: Matrix protein].
GAK9_HUMAN
 
NC score 0.051797 (rank : 33) θ value θ > 10 (rank : 41)
Query Neighborhood Hits 35 Target Neighborhood Hits 22 Shared Neighborhood Hits 9
SwissProt Accessions Q9UKH8 Gene names
Domain
Architecture

No domain graphic available

Description HERV-K_5q13.3 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K104 Gag protein) [Contains: Matrix protein].
GAK15_HUMAN
 
NC score 0.051601 (rank : 34) θ value θ > 10 (rank : 36)
Query Neighborhood Hits 35 Target Neighborhood Hits 19 Shared Neighborhood Hits 9
SwissProt Accessions P62688 Gene names ERVK4
Domain
Architecture

No domain graphic available

Description HERV-K_3q21.2 provirus ancestral Gag polyprotein (Gag polyprotein) (HERV-K(I) Gag protein).
TCF19_HUMAN
 
NC score 0.034398 (rank : 35) θ value 5.27518 (rank : 31)
Query Neighborhood Hits 35 Target Neighborhood Hits 124 Shared Neighborhood Hits 3
SwissProt Accessions Q9Y242, Q13176, Q15967, Q5SQ89, Q5STD6, Q5STF5, Q9BUM2, Q9UBH7 Gene names TCF19, SC1
Domain
Architecture
Description Transcription factor 19 (Transcription factor SC1).
SFRS7_HUMAN
 
NC score 0.026536 (rank : 36) θ value 8.99809 (rank : 33)
Query Neighborhood Hits 35 Target Neighborhood Hits 191 Shared Neighborhood Hits 8
SwissProt Accessions Q16629 Gene names SFRS7
Domain
Architecture
Description Splicing factor, arginine/serine-rich 7 (Splicing factor 9G8).
PERQ1_MOUSE
 
NC score 0.026381 (rank : 37) θ value 5.27518 (rank : 30)
Query Neighborhood Hits 35 Target Neighborhood Hits 215 Shared Neighborhood Hits 3
SwissProt Accessions Q99MR1 Gene names Perq1
Domain
Architecture
Description PERQ amino acid rich with GYF domain protein 1.
SFRS7_MOUSE
 
NC score 0.024811 (rank : 38) θ value 8.99809 (rank : 34)
Query Neighborhood Hits 35 Target Neighborhood Hits 177 Shared Neighborhood Hits 8
SwissProt Accessions Q8BL97, Q8BMC6, Q8BUR2, Q8R2N4, Q8R3E9, Q91YS1 Gene names Sfrs7
Domain
Architecture

No domain graphic available

Description Splicing factor, arginine/serine-rich 7.
FANCM_MOUSE
 
NC score 0.017309 (rank : 39) θ value 3.0926 (rank : 27)
Query Neighborhood Hits 35 Target Neighborhood Hits 177 Shared Neighborhood Hits 2
SwissProt Accessions Q8BGE5, Q69ZF5, Q8BKB7, Q8BUA8 Gene names Fancm, Kiaa1596
Domain
Architecture

No domain graphic available

Description Fanconi anemia group M protein homolog (EC 3.6.1.-) (ATP-dependent RNA helicase FANCM) (Protein FACM).
SETBP_MOUSE
 
NC score 0.014291 (rank : 40) θ value 6.88961 (rank : 32)
Query Neighborhood Hits 35 Target Neighborhood Hits 352 Shared Neighborhood Hits 9
SwissProt Accessions Q9Z180, Q66JL8 Gene names Setbp1, Kiaa0437
Domain
Architecture

No domain graphic available

Description SET-binding protein (SEB).
XPC_MOUSE
 
NC score 0.011991 (rank : 41) θ value 8.99809 (rank : 35)
Query Neighborhood Hits 35 Target Neighborhood Hits 75 Shared Neighborhood Hits 2
SwissProt Accessions P51612, P54732, Q3TKI2, Q920M1, Q9DBW7 Gene names Xpc
Domain
Architecture
Description DNA-repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C-complementing protein homolog) (p125).
PAR3L_HUMAN
 
NC score 0.011116 (rank : 42) θ value 4.03905 (rank : 28)
Query Neighborhood Hits 35 Target Neighborhood Hits 297 Shared Neighborhood Hits 2
SwissProt Accessions Q8TEW8, Q8IUC7, Q8IUC9, Q96DK9, Q96N09, Q96NX6, Q96NX7, Q96Q29 Gene names PARD3B, ALS2CR19, PAR3B, PAR3L
Domain
Architecture
Description Partitioning-defective 3 homolog B (PAR3-beta) (Partitioning-defective 3-like protein) (PAR3-L protein) (Amyotrophic lateral sclerosis 2 chromosome region candidate gene 19 protein).