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Network neighborhood for query Sequence : MSH4_MOUSE

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MSH4_MOUSE
 
SwissProt Accessions Q99MT2, Q920J1 Gene names Msh4
Domain
Architecture
Description MutS protein homolog 4 (mMsh4).
Rank Plots



Hits sorted by θ


MSH4_HUMAN
 
θ value 0 (rank : 1) NC score 0.996311 (rank : 2)
Query Neighborhood Hits 26 Target Neighborhood Hits 29 Shared Neighborhood Hits 15
SwissProt Accessions O15457, Q8NEB3, Q9UNP8 Gene names MSH4
Domain
Architecture
Description MutS protein homolog 4.
MSH4_MOUSE
 
θ value 0 (rank : 2) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 26 Target Neighborhood Hits 26 Shared Neighborhood Hits 26
SwissProt Accessions Q99MT2, Q920J1 Gene names Msh4
Domain
Architecture
Description MutS protein homolog 4 (mMsh4).
MSH3_HUMAN
 
θ value 1.2325e-65 (rank : 3) NC score 0.869004 (rank : 4)
Query Neighborhood Hits 26 Target Neighborhood Hits 49 Shared Neighborhood Hits 10
SwissProt Accessions P20585, Q6PJT5, Q86UQ6, Q92867 Gene names MSH3, DUC1, DUG
Domain
Architecture
Description DNA mismatch repair protein Msh3 (Divergent upstream protein) (DUP) (Mismatch repair protein 1) (MRP1).
MSH3_MOUSE
 
θ value 7.98882e-65 (rank : 4) NC score 0.870466 (rank : 3)
Query Neighborhood Hits 26 Target Neighborhood Hits 41 Shared Neighborhood Hits 10
SwissProt Accessions P13705 Gene names Msh3, Rep-3
Domain
Architecture
Description DNA mismatch repair protein Msh3 (Repair-3 protein) (REP-1).
MSH2_HUMAN
 
θ value 8.87376e-48 (rank : 5) NC score 0.839182 (rank : 5)
Query Neighborhood Hits 26 Target Neighborhood Hits 45 Shared Neighborhood Hits 10
SwissProt Accessions P43246, O75488 Gene names MSH2
Domain
Architecture
Description DNA mismatch repair protein Msh2 (MutS protein homolog 2).
MSH2_MOUSE
 
θ value 8.87376e-48 (rank : 6) NC score 0.838642 (rank : 6)
Query Neighborhood Hits 26 Target Neighborhood Hits 45 Shared Neighborhood Hits 10
SwissProt Accessions P43247 Gene names Msh2
Domain
Architecture
Description DNA mismatch repair protein Msh2 (MutS protein homolog 2).
MSH5_MOUSE
 
θ value 5.0505e-35 (rank : 7) NC score 0.802709 (rank : 7)
Query Neighborhood Hits 26 Target Neighborhood Hits 16 Shared Neighborhood Hits 10
SwissProt Accessions Q9QUM7, Q9Z1Q6 Gene names Msh5
Domain
Architecture

No domain graphic available

Description MutS protein homolog 5.
MSH5_HUMAN
 
θ value 1.12514e-34 (rank : 8) NC score 0.798839 (rank : 8)
Query Neighborhood Hits 26 Target Neighborhood Hits 22 Shared Neighborhood Hits 10
SwissProt Accessions O43196, O60586, Q5BLU9, Q5SSR1, Q8IW44, Q9BQC7 Gene names MSH5
Domain
Architecture
Description MutS protein homolog 5.
MSH6_MOUSE
 
θ value 5.584e-34 (rank : 9) NC score 0.767272 (rank : 9)
Query Neighborhood Hits 26 Target Neighborhood Hits 55 Shared Neighborhood Hits 10
SwissProt Accessions P54276, O54710 Gene names Msh6, Gtmbp
Domain
Architecture
Description DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa subunit) (G/T mismatch-binding protein) (GTBP) (GTMBP) (p160).
MSH6_HUMAN
 
θ value 1.4233e-29 (rank : 10) NC score 0.751674 (rank : 10)
Query Neighborhood Hits 26 Target Neighborhood Hits 81 Shared Neighborhood Hits 10
SwissProt Accessions P52701, O43706, O43917, Q8TCX4, Q9BTB5 Gene names MSH6, GTBP
Domain
Architecture
Description DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa subunit) (G/T mismatch-binding protein) (GTBP) (GTMBP) (p160).
CCD21_MOUSE
 
θ value 0.21417 (rank : 11) NC score 0.013510 (rank : 21)
Query Neighborhood Hits 26 Target Neighborhood Hits 1135 Shared Neighborhood Hits 3
SwissProt Accessions Q8BMK0, Q8BUF1, Q8K0E6 Gene names Ccdc21
Domain
Architecture

No domain graphic available

Description Coiled-coil domain-containing protein 21.
IQGA1_MOUSE
 
θ value 0.62314 (rank : 12) NC score 0.020743 (rank : 18)
Query Neighborhood Hits 26 Target Neighborhood Hits 219 Shared Neighborhood Hits 3
SwissProt Accessions Q9JKF1 Gene names Iqgap1
Domain
Architecture
Description Ras GTPase-activating-like protein IQGAP1.
ATPG_HUMAN
 
θ value 1.38821 (rank : 13) NC score 0.055787 (rank : 12)
Query Neighborhood Hits 26 Target Neighborhood Hits 9 Shared Neighborhood Hits 4
SwissProt Accessions P36542, Q5VYP3, Q96AS8 Gene names ATP5C1, ATP5C
Domain
Architecture
Description ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14).
ATPG_MOUSE
 
θ value 1.81305 (rank : 14) NC score 0.060164 (rank : 11)
Query Neighborhood Hits 26 Target Neighborhood Hits 9 Shared Neighborhood Hits 4
SwissProt Accessions Q91VR2 Gene names Atp5c1
Domain
Architecture
Description ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14).
WNK1_MOUSE
 
θ value 1.81305 (rank : 15) NC score 0.003956 (rank : 27)
Query Neighborhood Hits 26 Target Neighborhood Hits 1179 Shared Neighborhood Hits 5
SwissProt Accessions P83741 Gene names Wnk1, Prkwnk1
Domain
Architecture
Description Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1).
LTB1L_MOUSE
 
θ value 2.36792 (rank : 16) NC score 0.004522 (rank : 26)
Query Neighborhood Hits 26 Target Neighborhood Hits 514 Shared Neighborhood Hits 3
SwissProt Accessions Q8CG19, O88349, Q8BNW7, Q8C7F5, Q8CIR0 Gene names Ltbp1
Domain
Architecture
Description Latent-transforming growth factor beta-binding protein, isoform 1L precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta1-BP-1).
SETD4_MOUSE
 
θ value 2.36792 (rank : 17) NC score 0.037845 (rank : 15)
Query Neighborhood Hits 26 Target Neighborhood Hits 10 Shared Neighborhood Hits 3
SwissProt Accessions P58467 Gene names Setd4, ORF21
Domain
Architecture

No domain graphic available

Description SET domain-containing protein 4.
RBP2_HUMAN
 
θ value 3.0926 (rank : 18) NC score 0.008473 (rank : 25)
Query Neighborhood Hits 26 Target Neighborhood Hits 249 Shared Neighborhood Hits 2
SwissProt Accessions P49792, Q13074, Q15280, Q53TE2, Q59FH7 Gene names RANBP2, NUP358
Domain
Architecture
Description Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270).
ARNT_MOUSE
 
θ value 4.03905 (rank : 19) NC score 0.008611 (rank : 24)
Query Neighborhood Hits 26 Target Neighborhood Hits 213 Shared Neighborhood Hits 4
SwissProt Accessions P53762, Q60661 Gene names Arnt
Domain
Architecture
Description Aryl hydrocarbon receptor nuclear translocator (ARNT protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta).
ARP8_HUMAN
 
θ value 4.03905 (rank : 20) NC score 0.022521 (rank : 17)
Query Neighborhood Hits 26 Target Neighborhood Hits 47 Shared Neighborhood Hits 3
SwissProt Accessions Q9H981, Q9H663 Gene names ACTR8
Domain
Architecture
Description Actin-related protein 8.
ARP8_MOUSE
 
θ value 4.03905 (rank : 21) NC score 0.022604 (rank : 16)
Query Neighborhood Hits 26 Target Neighborhood Hits 42 Shared Neighborhood Hits 3
SwissProt Accessions Q8R2S9, Q9CYC4 Gene names Actr8
Domain
Architecture
Description Actin-related protein 8.
AKAP2_HUMAN
 
θ value 5.27518 (rank : 22) NC score 0.016729 (rank : 19)
Query Neighborhood Hits 26 Target Neighborhood Hits 507 Shared Neighborhood Hits 3
SwissProt Accessions Q9Y2D5, Q9UG26 Gene names AKAP2, KIAA0920
Domain
Architecture

No domain graphic available

Description A-kinase anchor protein 2 (Protein kinase A-anchoring protein 2) (PRKA2) (AKAP-2).
EMSY_HUMAN
 
θ value 6.88961 (rank : 23) NC score 0.010744 (rank : 23)
Query Neighborhood Hits 26 Target Neighborhood Hits 296 Shared Neighborhood Hits 3
SwissProt Accessions Q7Z589, Q4G109, Q8NBU6, Q8TE50, Q9H8I9, Q9NRH0 Gene names EMSY, C11orf30
Domain
Architecture
Description Protein EMSY.
HELC1_HUMAN
 
θ value 6.88961 (rank : 24) NC score 0.010886 (rank : 22)
Query Neighborhood Hits 26 Target Neighborhood Hits 71 Shared Neighborhood Hits 2
SwissProt Accessions Q8N3C0, O43738, Q9H1I9, Q9NTR0 Gene names ASCC3, HELIC1
Domain
Architecture

No domain graphic available

Description Activating signal cointegrator 1 complex subunit 3 (EC 3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex subunit p200) (Helicase, ATP binding 1).
SENP7_HUMAN
 
θ value 6.88961 (rank : 25) NC score 0.013597 (rank : 20)
Query Neighborhood Hits 26 Target Neighborhood Hits 97 Shared Neighborhood Hits 2
SwissProt Accessions Q9BQF6, Q96PS5, Q9C0F6, Q9HBT5 Gene names SENP7, KIAA1707, SSP2, SUSP2
Domain
Architecture
Description Sentrin-specific protease 7 (EC 3.4.22.-) (Sentrin/SUMO-specific protease SENP7) (SUMO-1-specific protease 2).
PCDBD_HUMAN
 
θ value 8.99809 (rank : 26) NC score 0.000733 (rank : 28)
Query Neighborhood Hits 26 Target Neighborhood Hits 150 Shared Neighborhood Hits 2
SwissProt Accessions Q9Y5F0 Gene names PCDHB13
Domain
Architecture
Description Protocadherin beta 13 precursor (PCDH-beta13).
ZCPW1_HUMAN
 
θ value θ > 10 (rank : 27) NC score 0.050372 (rank : 14)
Query Neighborhood Hits 26 Target Neighborhood Hits 116 Shared Neighborhood Hits 2
SwissProt Accessions Q9H0M4, Q8NA98, Q9BUD0, Q9NWF7 Gene names ZCWPW1
Domain
Architecture

No domain graphic available

Description Zinc finger CW-type PWWP domain protein 1.
ZCPW1_MOUSE
 
θ value θ > 10 (rank : 28) NC score 0.050401 (rank : 13)
Query Neighborhood Hits 26 Target Neighborhood Hits 307 Shared Neighborhood Hits 3
SwissProt Accessions Q6IR42 Gene names Zcwpw1
Domain
Architecture

No domain graphic available

Description Zinc finger CW-type PWWP domain protein 1 homolog.

Hits sorted by NC score


MSH4_MOUSE
 
NC score 0.999962 (rank : 1) θ value 0 (rank : 2)
Query Neighborhood Hits 26 Target Neighborhood Hits 26 Shared Neighborhood Hits 26
SwissProt Accessions Q99MT2, Q920J1 Gene names Msh4
Domain
Architecture
Description MutS protein homolog 4 (mMsh4).
MSH4_HUMAN
 
NC score 0.996311 (rank : 2) θ value 0 (rank : 1)
Query Neighborhood Hits 26 Target Neighborhood Hits 29 Shared Neighborhood Hits 15
SwissProt Accessions O15457, Q8NEB3, Q9UNP8 Gene names MSH4
Domain
Architecture
Description MutS protein homolog 4.
MSH3_MOUSE
 
NC score 0.870466 (rank : 3) θ value 7.98882e-65 (rank : 4)
Query Neighborhood Hits 26 Target Neighborhood Hits 41 Shared Neighborhood Hits 10
SwissProt Accessions P13705 Gene names Msh3, Rep-3
Domain
Architecture
Description DNA mismatch repair protein Msh3 (Repair-3 protein) (REP-1).
MSH3_HUMAN
 
NC score 0.869004 (rank : 4) θ value 1.2325e-65 (rank : 3)
Query Neighborhood Hits 26 Target Neighborhood Hits 49 Shared Neighborhood Hits 10
SwissProt Accessions P20585, Q6PJT5, Q86UQ6, Q92867 Gene names MSH3, DUC1, DUG
Domain
Architecture
Description DNA mismatch repair protein Msh3 (Divergent upstream protein) (DUP) (Mismatch repair protein 1) (MRP1).
MSH2_HUMAN
 
NC score 0.839182 (rank : 5) θ value 8.87376e-48 (rank : 5)
Query Neighborhood Hits 26 Target Neighborhood Hits 45 Shared Neighborhood Hits 10
SwissProt Accessions P43246, O75488 Gene names MSH2
Domain
Architecture
Description DNA mismatch repair protein Msh2 (MutS protein homolog 2).
MSH2_MOUSE
 
NC score 0.838642 (rank : 6) θ value 8.87376e-48 (rank : 6)
Query Neighborhood Hits 26 Target Neighborhood Hits 45 Shared Neighborhood Hits 10
SwissProt Accessions P43247 Gene names Msh2
Domain
Architecture
Description DNA mismatch repair protein Msh2 (MutS protein homolog 2).
MSH5_MOUSE
 
NC score 0.802709 (rank : 7) θ value 5.0505e-35 (rank : 7)
Query Neighborhood Hits 26 Target Neighborhood Hits 16 Shared Neighborhood Hits 10
SwissProt Accessions Q9QUM7, Q9Z1Q6 Gene names Msh5
Domain
Architecture

No domain graphic available

Description MutS protein homolog 5.
MSH5_HUMAN
 
NC score 0.798839 (rank : 8) θ value 1.12514e-34 (rank : 8)
Query Neighborhood Hits 26 Target Neighborhood Hits 22 Shared Neighborhood Hits 10
SwissProt Accessions O43196, O60586, Q5BLU9, Q5SSR1, Q8IW44, Q9BQC7 Gene names MSH5
Domain
Architecture
Description MutS protein homolog 5.
MSH6_MOUSE
 
NC score 0.767272 (rank : 9) θ value 5.584e-34 (rank : 9)
Query Neighborhood Hits 26 Target Neighborhood Hits 55 Shared Neighborhood Hits 10
SwissProt Accessions P54276, O54710 Gene names Msh6, Gtmbp
Domain
Architecture
Description DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa subunit) (G/T mismatch-binding protein) (GTBP) (GTMBP) (p160).
MSH6_HUMAN
 
NC score 0.751674 (rank : 10) θ value 1.4233e-29 (rank : 10)
Query Neighborhood Hits 26 Target Neighborhood Hits 81 Shared Neighborhood Hits 10
SwissProt Accessions P52701, O43706, O43917, Q8TCX4, Q9BTB5 Gene names MSH6, GTBP
Domain
Architecture
Description DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa subunit) (G/T mismatch-binding protein) (GTBP) (GTMBP) (p160).
ATPG_MOUSE
 
NC score 0.060164 (rank : 11) θ value 1.81305 (rank : 14)
Query Neighborhood Hits 26 Target Neighborhood Hits 9 Shared Neighborhood Hits 4
SwissProt Accessions Q91VR2 Gene names Atp5c1
Domain
Architecture
Description ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14).
ATPG_HUMAN
 
NC score 0.055787 (rank : 12) θ value 1.38821 (rank : 13)
Query Neighborhood Hits 26 Target Neighborhood Hits 9 Shared Neighborhood Hits 4
SwissProt Accessions P36542, Q5VYP3, Q96AS8 Gene names ATP5C1, ATP5C
Domain
Architecture
Description ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14).
ZCPW1_MOUSE
 
NC score 0.050401 (rank : 13) θ value θ > 10 (rank : 28)
Query Neighborhood Hits 26 Target Neighborhood Hits 307 Shared Neighborhood Hits 3
SwissProt Accessions Q6IR42 Gene names Zcwpw1
Domain
Architecture

No domain graphic available

Description Zinc finger CW-type PWWP domain protein 1 homolog.
ZCPW1_HUMAN
 
NC score 0.050372 (rank : 14) θ value θ > 10 (rank : 27)
Query Neighborhood Hits 26 Target Neighborhood Hits 116 Shared Neighborhood Hits 2
SwissProt Accessions Q9H0M4, Q8NA98, Q9BUD0, Q9NWF7 Gene names ZCWPW1
Domain
Architecture

No domain graphic available

Description Zinc finger CW-type PWWP domain protein 1.
SETD4_MOUSE
 
NC score 0.037845 (rank : 15) θ value 2.36792 (rank : 17)
Query Neighborhood Hits 26 Target Neighborhood Hits 10 Shared Neighborhood Hits 3
SwissProt Accessions P58467 Gene names Setd4, ORF21
Domain
Architecture

No domain graphic available

Description SET domain-containing protein 4.
ARP8_MOUSE
 
NC score 0.022604 (rank : 16) θ value 4.03905 (rank : 21)
Query Neighborhood Hits 26 Target Neighborhood Hits 42 Shared Neighborhood Hits 3
SwissProt Accessions Q8R2S9, Q9CYC4 Gene names Actr8
Domain
Architecture
Description Actin-related protein 8.
ARP8_HUMAN
 
NC score 0.022521 (rank : 17) θ value 4.03905 (rank : 20)
Query Neighborhood Hits 26 Target Neighborhood Hits 47 Shared Neighborhood Hits 3
SwissProt Accessions Q9H981, Q9H663 Gene names ACTR8
Domain
Architecture
Description Actin-related protein 8.
IQGA1_MOUSE
 
NC score 0.020743 (rank : 18) θ value 0.62314 (rank : 12)
Query Neighborhood Hits 26 Target Neighborhood Hits 219 Shared Neighborhood Hits 3
SwissProt Accessions Q9JKF1 Gene names Iqgap1
Domain
Architecture
Description Ras GTPase-activating-like protein IQGAP1.
AKAP2_HUMAN
 
NC score 0.016729 (rank : 19) θ value 5.27518 (rank : 22)
Query Neighborhood Hits 26 Target Neighborhood Hits 507 Shared Neighborhood Hits 3
SwissProt Accessions Q9Y2D5, Q9UG26 Gene names AKAP2, KIAA0920
Domain
Architecture

No domain graphic available

Description A-kinase anchor protein 2 (Protein kinase A-anchoring protein 2) (PRKA2) (AKAP-2).
SENP7_HUMAN
 
NC score 0.013597 (rank : 20) θ value 6.88961 (rank : 25)
Query Neighborhood Hits 26 Target Neighborhood Hits 97 Shared Neighborhood Hits 2
SwissProt Accessions Q9BQF6, Q96PS5, Q9C0F6, Q9HBT5 Gene names SENP7, KIAA1707, SSP2, SUSP2
Domain
Architecture
Description Sentrin-specific protease 7 (EC 3.4.22.-) (Sentrin/SUMO-specific protease SENP7) (SUMO-1-specific protease 2).
CCD21_MOUSE
 
NC score 0.013510 (rank : 21) θ value 0.21417 (rank : 11)
Query Neighborhood Hits 26 Target Neighborhood Hits 1135 Shared Neighborhood Hits 3
SwissProt Accessions Q8BMK0, Q8BUF1, Q8K0E6 Gene names Ccdc21
Domain
Architecture

No domain graphic available

Description Coiled-coil domain-containing protein 21.
HELC1_HUMAN
 
NC score 0.010886 (rank : 22) θ value 6.88961 (rank : 24)
Query Neighborhood Hits 26 Target Neighborhood Hits 71 Shared Neighborhood Hits 2
SwissProt Accessions Q8N3C0, O43738, Q9H1I9, Q9NTR0 Gene names ASCC3, HELIC1
Domain
Architecture

No domain graphic available

Description Activating signal cointegrator 1 complex subunit 3 (EC 3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex subunit p200) (Helicase, ATP binding 1).
EMSY_HUMAN
 
NC score 0.010744 (rank : 23) θ value 6.88961 (rank : 23)
Query Neighborhood Hits 26 Target Neighborhood Hits 296 Shared Neighborhood Hits 3
SwissProt Accessions Q7Z589, Q4G109, Q8NBU6, Q8TE50, Q9H8I9, Q9NRH0 Gene names EMSY, C11orf30
Domain
Architecture
Description Protein EMSY.
ARNT_MOUSE
 
NC score 0.008611 (rank : 24) θ value 4.03905 (rank : 19)
Query Neighborhood Hits 26 Target Neighborhood Hits 213 Shared Neighborhood Hits 4
SwissProt Accessions P53762, Q60661 Gene names Arnt
Domain
Architecture
Description Aryl hydrocarbon receptor nuclear translocator (ARNT protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta).
RBP2_HUMAN
 
NC score 0.008473 (rank : 25) θ value 3.0926 (rank : 18)
Query Neighborhood Hits 26 Target Neighborhood Hits 249 Shared Neighborhood Hits 2
SwissProt Accessions P49792, Q13074, Q15280, Q53TE2, Q59FH7 Gene names RANBP2, NUP358
Domain
Architecture
Description Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270).
LTB1L_MOUSE
 
NC score 0.004522 (rank : 26) θ value 2.36792 (rank : 16)
Query Neighborhood Hits 26 Target Neighborhood Hits 514 Shared Neighborhood Hits 3
SwissProt Accessions Q8CG19, O88349, Q8BNW7, Q8C7F5, Q8CIR0 Gene names Ltbp1
Domain
Architecture
Description Latent-transforming growth factor beta-binding protein, isoform 1L precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta1-BP-1).
WNK1_MOUSE
 
NC score 0.003956 (rank : 27) θ value 1.81305 (rank : 15)
Query Neighborhood Hits 26 Target Neighborhood Hits 1179 Shared Neighborhood Hits 5
SwissProt Accessions P83741 Gene names Wnk1, Prkwnk1
Domain
Architecture
Description Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1).
PCDBD_HUMAN
 
NC score 0.000733 (rank : 28) θ value 8.99809 (rank : 26)
Query Neighborhood Hits 26 Target Neighborhood Hits 150 Shared Neighborhood Hits 2
SwissProt Accessions Q9Y5F0 Gene names PCDHB13
Domain
Architecture
Description Protocadherin beta 13 precursor (PCDH-beta13).