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Network neighborhood for query Sequence : LSM11_HUMAN

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LSM11_HUMAN
SwissProt Accessions	P83369, Q7Z7P0, Q8N975	Gene names	LSM11
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm11.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

LSM11_HUMAN
θ value	1.02895e-112 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	P83369, Q7Z7P0, Q8N975	Gene names	LSM11
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm11.

LSM11_MOUSE
θ value	5.64607e-111 (rank : 2)	NC score	0.989637 (rank : 2)
Query Neighborhood Hits	16	Target Neighborhood Hits	13	Shared Neighborhood Hits	4
SwissProt Accessions	Q8BUV6	Gene names	Lsm11
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm11.

NCOA1_MOUSE
θ value	0.0736092 (rank : 3)	NC score	0.049652 (rank : 3)
Query Neighborhood Hits	16	Target Neighborhood Hits	196	Shared Neighborhood Hits	2
SwissProt Accessions	P70365, P70366, Q61202, Q8CBI9	Gene names	Ncoa1, Src1
Domain Architecture	No domain graphic available
Description	Nuclear receptor coactivator 1 (EC 2.3.1.48) (NCoA-1) (Steroid receptor coactivator 1) (SRC-1) (Nuclear receptor coactivator protein 1) (mNRC-1).

SPEG_HUMAN
θ value	0.279714 (rank : 4)	NC score	0.020727 (rank : 8)
Query Neighborhood Hits	16	Target Neighborhood Hits	1762	Shared Neighborhood Hits	5
SwissProt Accessions	Q15772, Q27J74, Q695L1, Q6FGA6, Q6ZQW1, Q6ZTL8, Q9P2P9	Gene names	SPEG, APEG1, KIAA1297
Domain Architecture
Description	Striated muscle preferentially expressed protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

SPEG_MOUSE
θ value	0.813845 (rank : 5)	NC score	0.019738 (rank : 9)
Query Neighborhood Hits	16	Target Neighborhood Hits	1959	Shared Neighborhood Hits	6
SwissProt Accessions	Q62407, Q3TPH8, Q6P5V1, Q80TF7, Q80ZN0, Q8BZF4, Q9EQJ5	Gene names	Speg, Apeg1, Kiaa1297
Domain Architecture
Description	Striated muscle-specific serine/threonine protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

EVPL_HUMAN
θ value	2.36792 (rank : 6)	NC score	0.013878 (rank : 10)
Query Neighborhood Hits	16	Target Neighborhood Hits	895	Shared Neighborhood Hits	4
SwissProt Accessions	Q92817	Gene names	EVPL
Domain Architecture
Description	Envoplakin (210 kDa paraneoplastic pemphigus antigen) (p210) (210 kDa cornified envelope precursor protein).

PKHA6_MOUSE
θ value	2.36792 (rank : 7)	NC score	0.023888 (rank : 7)
Query Neighborhood Hits	16	Target Neighborhood Hits	591	Shared Neighborhood Hits	4
SwissProt Accessions	Q7TQG1, Q8K0J5	Gene names	Plekha6, Pepp3
Domain Architecture
Description	Pleckstrin homology domain-containing family A member 6 (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3).

KPCE_MOUSE
θ value	3.0926 (rank : 8)	NC score	0.006818 (rank : 15)
Query Neighborhood Hits	16	Target Neighborhood Hits	906	Shared Neighborhood Hits	5
SwissProt Accessions	P16054	Gene names	Prkce, Pkce, Pkcea
Domain Architecture
Description	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon).

MYST4_MOUSE
θ value	5.27518 (rank : 9)	NC score	0.012595 (rank : 11)
Query Neighborhood Hits	16	Target Neighborhood Hits	416	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BRB7, Q7TNW5, Q8BG35, Q8C441, Q9JKX5	Gene names	Myst4
Domain Architecture	No domain graphic available
Description	Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-) (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (Querkopf protein).

REN3A_HUMAN
θ value	5.27518 (rank : 10)	NC score	0.027766 (rank : 6)
Query Neighborhood Hits	16	Target Neighborhood Hits	248	Shared Neighborhood Hits	3
SwissProt Accessions	Q9H1J1, Q5T8C3, Q5T8C9, Q7Z6N3, Q86YK1, Q9BZI8	Gene names	UPF3A, RENT3A, UPF3
Domain Architecture	No domain graphic available
Description	Regulator of nonsense transcripts 3A (Nonsense mRNA reducing factor 3A) (Up-frameshift suppressor 3 homolog A) (hUpf3).

BARH1_HUMAN
θ value	8.99809 (rank : 11)	NC score	0.007731 (rank : 14)
Query Neighborhood Hits	16	Target Neighborhood Hits	373	Shared Neighborhood Hits	3
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

BARH1_MOUSE
θ value	8.99809 (rank : 12)	NC score	0.007866 (rank : 12)
Query Neighborhood Hits	16	Target Neighborhood Hits	350	Shared Neighborhood Hits	3
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

BRSK1_HUMAN
θ value	8.99809 (rank : 13)	NC score	0.005841 (rank : 16)
Query Neighborhood Hits	16	Target Neighborhood Hits	942	Shared Neighborhood Hits	5
SwissProt Accessions	Q8TDC3, Q5J5B5, Q8NDD0, Q8NDR4, Q8TDC2, Q96AV4, Q96JL4	Gene names	BRSK1, KIAA1811, SAD1
Domain Architecture
Description	BR serine/threonine-protein kinase 1 (EC 2.7.11.1) (SAD1 kinase) (SAD1A).

PRP16_HUMAN
θ value	8.99809 (rank : 14)	NC score	0.007735 (rank : 13)
Query Neighborhood Hits	16	Target Neighborhood Hits	135	Shared Neighborhood Hits	2
SwissProt Accessions	Q92620, O75212, Q96HN7	Gene names	DHX38, DDX38, KIAA0224, PRP16
Domain Architecture
Description	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38).

SMD2_HUMAN
θ value	8.99809 (rank : 15)	NC score	0.047333 (rank : 4)
Query Neighborhood Hits	16	Target Neighborhood Hits	12	Shared Neighborhood Hits	4
SwissProt Accessions	P62316, P43330	Gene names	SNRPD2
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2).

SMD2_MOUSE
θ value	8.99809 (rank : 16)	NC score	0.047333 (rank : 5)
Query Neighborhood Hits	16	Target Neighborhood Hits	12	Shared Neighborhood Hits	4
SwissProt Accessions	P62317, P43330	Gene names	Snrpd2
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2).

Hits sorted by NC score

LSM11_HUMAN
NC score	0.999962 (rank : 1)	θ value	1.02895e-112 (rank : 1)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	P83369, Q7Z7P0, Q8N975	Gene names	LSM11
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm11.

LSM11_MOUSE
NC score	0.989637 (rank : 2)	θ value	5.64607e-111 (rank : 2)
Query Neighborhood Hits	16	Target Neighborhood Hits	13	Shared Neighborhood Hits	4
SwissProt Accessions	Q8BUV6	Gene names	Lsm11
Domain Architecture	No domain graphic available
Description	U7 snRNA-associated Sm-like protein LSm11.

NCOA1_MOUSE
NC score	0.049652 (rank : 3)	θ value	0.0736092 (rank : 3)
Query Neighborhood Hits	16	Target Neighborhood Hits	196	Shared Neighborhood Hits	2
SwissProt Accessions	P70365, P70366, Q61202, Q8CBI9	Gene names	Ncoa1, Src1
Domain Architecture	No domain graphic available
Description	Nuclear receptor coactivator 1 (EC 2.3.1.48) (NCoA-1) (Steroid receptor coactivator 1) (SRC-1) (Nuclear receptor coactivator protein 1) (mNRC-1).

SMD2_HUMAN
NC score	0.047333 (rank : 4)	θ value	8.99809 (rank : 15)
Query Neighborhood Hits	16	Target Neighborhood Hits	12	Shared Neighborhood Hits	4
SwissProt Accessions	P62316, P43330	Gene names	SNRPD2
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2).

SMD2_MOUSE
NC score	0.047333 (rank : 5)	θ value	8.99809 (rank : 16)
Query Neighborhood Hits	16	Target Neighborhood Hits	12	Shared Neighborhood Hits	4
SwissProt Accessions	P62317, P43330	Gene names	Snrpd2
Domain Architecture
Description	Small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) (Sm-D2).

REN3A_HUMAN
NC score	0.027766 (rank : 6)	θ value	5.27518 (rank : 10)
Query Neighborhood Hits	16	Target Neighborhood Hits	248	Shared Neighborhood Hits	3
SwissProt Accessions	Q9H1J1, Q5T8C3, Q5T8C9, Q7Z6N3, Q86YK1, Q9BZI8	Gene names	UPF3A, RENT3A, UPF3
Domain Architecture	No domain graphic available
Description	Regulator of nonsense transcripts 3A (Nonsense mRNA reducing factor 3A) (Up-frameshift suppressor 3 homolog A) (hUpf3).

PKHA6_MOUSE
NC score	0.023888 (rank : 7)	θ value	2.36792 (rank : 7)
Query Neighborhood Hits	16	Target Neighborhood Hits	591	Shared Neighborhood Hits	4
SwissProt Accessions	Q7TQG1, Q8K0J5	Gene names	Plekha6, Pepp3
Domain Architecture
Description	Pleckstrin homology domain-containing family A member 6 (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3).

SPEG_HUMAN
NC score	0.020727 (rank : 8)	θ value	0.279714 (rank : 4)
Query Neighborhood Hits	16	Target Neighborhood Hits	1762	Shared Neighborhood Hits	5
SwissProt Accessions	Q15772, Q27J74, Q695L1, Q6FGA6, Q6ZQW1, Q6ZTL8, Q9P2P9	Gene names	SPEG, APEG1, KIAA1297
Domain Architecture
Description	Striated muscle preferentially expressed protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

SPEG_MOUSE
NC score	0.019738 (rank : 9)	θ value	0.813845 (rank : 5)
Query Neighborhood Hits	16	Target Neighborhood Hits	1959	Shared Neighborhood Hits	6
SwissProt Accessions	Q62407, Q3TPH8, Q6P5V1, Q80TF7, Q80ZN0, Q8BZF4, Q9EQJ5	Gene names	Speg, Apeg1, Kiaa1297
Domain Architecture
Description	Striated muscle-specific serine/threonine protein kinase (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1).

EVPL_HUMAN
NC score	0.013878 (rank : 10)	θ value	2.36792 (rank : 6)
Query Neighborhood Hits	16	Target Neighborhood Hits	895	Shared Neighborhood Hits	4
SwissProt Accessions	Q92817	Gene names	EVPL
Domain Architecture
Description	Envoplakin (210 kDa paraneoplastic pemphigus antigen) (p210) (210 kDa cornified envelope precursor protein).

MYST4_MOUSE
NC score	0.012595 (rank : 11)	θ value	5.27518 (rank : 9)
Query Neighborhood Hits	16	Target Neighborhood Hits	416	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BRB7, Q7TNW5, Q8BG35, Q8C441, Q9JKX5	Gene names	Myst4
Domain Architecture	No domain graphic available
Description	Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-) (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (Querkopf protein).

BARH1_MOUSE
NC score	0.007866 (rank : 12)	θ value	8.99809 (rank : 12)
Query Neighborhood Hits	16	Target Neighborhood Hits	350	Shared Neighborhood Hits	3
SwissProt Accessions	P63157, Q9JK26	Gene names	Barhl1, Bhx1, Mbh2
Domain Architecture	No domain graphic available
Description	BarH-like 1 homeobox protein (Bar-class homeodomain protein MBH2) (BarH-related homeobox protein 1).

PRP16_HUMAN
NC score	0.007735 (rank : 13)	θ value	8.99809 (rank : 14)
Query Neighborhood Hits	16	Target Neighborhood Hits	135	Shared Neighborhood Hits	2
SwissProt Accessions	Q92620, O75212, Q96HN7	Gene names	DHX38, DDX38, KIAA0224, PRP16
Domain Architecture
Description	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38).

BARH1_HUMAN
NC score	0.007731 (rank : 14)	θ value	8.99809 (rank : 11)
Query Neighborhood Hits	16	Target Neighborhood Hits	373	Shared Neighborhood Hits	3
SwissProt Accessions	Q9BZE3, Q9NY88	Gene names	BARHL1
Domain Architecture
Description	BarH-like 1 homeobox protein.

KPCE_MOUSE
NC score	0.006818 (rank : 15)	θ value	3.0926 (rank : 8)
Query Neighborhood Hits	16	Target Neighborhood Hits	906	Shared Neighborhood Hits	5
SwissProt Accessions	P16054	Gene names	Prkce, Pkce, Pkcea
Domain Architecture
Description	Protein kinase C epsilon type (EC 2.7.11.13) (nPKC-epsilon).

BRSK1_HUMAN
NC score	0.005841 (rank : 16)	θ value	8.99809 (rank : 13)
Query Neighborhood Hits	16	Target Neighborhood Hits	942	Shared Neighborhood Hits	5
SwissProt Accessions	Q8TDC3, Q5J5B5, Q8NDD0, Q8NDR4, Q8TDC2, Q96AV4, Q96JL4	Gene names	BRSK1, KIAA1811, SAD1
Domain Architecture
Description	BR serine/threonine-protein kinase 1 (EC 2.7.11.1) (SAD1 kinase) (SAD1A).