Please be patient as the page loads

Stop Image Loading/Displaying

Network neighborhood for query Sequence : SYPH_MOUSE

For an explanation of this page, click here

SYPH_MOUSE
SwissProt Accessions	Q62277, Q8BRQ0, Q91WI8	Gene names	Syp
Domain Architecture
Description	Synaptophysin (Major synaptic vesicle protein p38) (BM89 antigen).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

SYPH_MOUSE
θ value	1.86652e-130 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	25	Target Neighborhood Hits	25	Shared Neighborhood Hits	25
SwissProt Accessions	Q62277, Q8BRQ0, Q91WI8	Gene names	Syp
Domain Architecture
Description	Synaptophysin (Major synaptic vesicle protein p38) (BM89 antigen).

SYPH_HUMAN
θ value	4.45295e-124 (rank : 2)	NC score	0.997807 (rank : 2)
Query Neighborhood Hits	25	Target Neighborhood Hits	20	Shared Neighborhood Hits	18
SwissProt Accessions	P08247, Q6P2F7	Gene names	SYP
Domain Architecture
Description	Synaptophysin (Major synaptic vesicle protein p38).

SYNPR_MOUSE
θ value	8.53533e-67 (rank : 3)	NC score	0.976478 (rank : 4)
Query Neighborhood Hits	25	Target Neighborhood Hits	15	Shared Neighborhood Hits	9
SwissProt Accessions	Q8BGN8, Q8C5J4, Q9DB89	Gene names	Synpr
Domain Architecture
Description	Synaptoporin.

SYNPR_HUMAN
θ value	1.90147e-66 (rank : 4)	NC score	0.977730 (rank : 3)
Query Neighborhood Hits	25	Target Neighborhood Hits	16	Shared Neighborhood Hits	9
SwissProt Accessions	Q8TBG9	Gene names	SYNPR
Domain Architecture
Description	Synaptoporin.

SYPL2_HUMAN
θ value	6.55044e-59 (rank : 5)	NC score	0.967686 (rank : 5)
Query Neighborhood Hits	25	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	Q5VXT5, Q6ZMX1	Gene names	SYPL2
Domain Architecture	No domain graphic available
Description	Synaptophysin-like protein 2.

SYPL2_MOUSE
θ value	2.7521e-57 (rank : 6)	NC score	0.966362 (rank : 6)
Query Neighborhood Hits	25	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	O89104	Gene names	Sypl2, Mg29
Domain Architecture
Description	Synaptophysin-like protein 2 (Mitsugumin-29) (Mg29).

SYPL1_HUMAN
θ value	2.041e-52 (rank : 7)	NC score	0.959674 (rank : 8)
Query Neighborhood Hits	25	Target Neighborhood Hits	13	Shared Neighborhood Hits	8
SwissProt Accessions	Q16563, Q96AR8	Gene names	SYPL1, SYPL
Domain Architecture
Description	Synaptophysin-like protein 1 (Pantophysin).

SYPL1_MOUSE
θ value	5.93839e-52 (rank : 8)	NC score	0.959887 (rank : 7)
Query Neighborhood Hits	25	Target Neighborhood Hits	11	Shared Neighborhood Hits	8
SwissProt Accessions	O09117, Q8BQI8, Q8BQJ1, Q8C749	Gene names	Sypl1, Pphn, Sypl
Domain Architecture
Description	Synaptophysin-like protein 1 (Pantophysin).

TGBR3_HUMAN
θ value	0.0736092 (rank : 9)	NC score	0.074573 (rank : 9)
Query Neighborhood Hits	25	Target Neighborhood Hits	44	Shared Neighborhood Hits	8
SwissProt Accessions	Q03167, Q5T2T4, Q5U731, Q9UGI2	Gene names	TGFBR3
Domain Architecture
Description	TGF-beta receptor type III precursor (TGFR-3) (Transforming growth factor beta receptor III) (Betaglycan).

CO5A2_HUMAN
θ value	0.163984 (rank : 10)	NC score	0.029921 (rank : 12)
Query Neighborhood Hits	25	Target Neighborhood Hits	760	Shared Neighborhood Hits	13
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

CO9A1_MOUSE
θ value	0.163984 (rank : 11)	NC score	0.036424 (rank : 11)
Query Neighborhood Hits	25	Target Neighborhood Hits	477	Shared Neighborhood Hits	15
SwissProt Accessions	Q05722, Q61269, Q61270, Q61433, Q61940	Gene names	Col9a1
Domain Architecture
Description	Collagen alpha-1(IX) chain precursor.

EWS_MOUSE
θ value	0.62314 (rank : 12)	NC score	0.040125 (rank : 10)
Query Neighborhood Hits	25	Target Neighborhood Hits	271	Shared Neighborhood Hits	11
SwissProt Accessions	Q61545	Gene names	Ewsr1, Ews, Ewsh
Domain Architecture
Description	RNA-binding protein EWS.

CO9A1_HUMAN
θ value	1.38821 (rank : 13)	NC score	0.029848 (rank : 13)
Query Neighborhood Hits	25	Target Neighborhood Hits	420	Shared Neighborhood Hits	14
SwissProt Accessions	P20849, Q13699, Q13700, Q5TF52, Q6P467, Q96BM8, Q99225, Q9H151, Q9H152, Q9Y6P2, Q9Y6P3	Gene names	COL9A1
Domain Architecture
Description	Collagen alpha-1(IX) chain precursor.

CO7A1_HUMAN
θ value	3.0926 (rank : 14)	NC score	0.020818 (rank : 19)
Query Neighborhood Hits	25	Target Neighborhood Hits	807	Shared Neighborhood Hits	13
SwissProt Accessions	Q02388, Q14054, Q16507	Gene names	COL7A1
Domain Architecture
Description	Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen).

TBX21_HUMAN
θ value	3.0926 (rank : 15)	NC score	0.016149 (rank : 20)
Query Neighborhood Hits	25	Target Neighborhood Hits	146	Shared Neighborhood Hits	5
SwissProt Accessions	Q9UL17	Gene names	TBX21, TBET, TBLYM
Domain Architecture
Description	T-box transcription factor TBX21 (T-box protein 21) (Transcription factor TBLYM) (T-cell-specific T-box transcription factor T-bet).

CO2A1_HUMAN
θ value	4.03905 (rank : 16)	NC score	0.026944 (rank : 14)
Query Neighborhood Hits	25	Target Neighborhood Hits	486	Shared Neighborhood Hits	13
SwissProt Accessions	P02458, Q12985, Q14009, Q14044, Q14046, Q14056, Q14058, Q16672, Q6LBY1, Q6LBY2, Q6LBY3, Q99227, Q9UE38, Q9UE39, Q9UE40, Q9UE41, Q9UE42, Q9UE43	Gene names	COL2A1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

HCN1_MOUSE
θ value	4.03905 (rank : 17)	NC score	0.014298 (rank : 23)
Query Neighborhood Hits	25	Target Neighborhood Hits	172	Shared Neighborhood Hits	3
SwissProt Accessions	O88704, O54899, Q9D613	Gene names	Hcn1, Bcng1, Hac2
Domain Architecture
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 (Brain cyclic nucleotide-gated channel 1) (BCNG-1) (Hyperpolarization-activated cation channel 2) (HAC-2).

CKLF3_MOUSE
θ value	5.27518 (rank : 18)	NC score	0.016086 (rank : 21)
Query Neighborhood Hits	25	Target Neighborhood Hits	18	Shared Neighborhood Hits	2
SwissProt Accessions	Q99LJ5, Q8BJU1, Q9D165	Gene names	Cmtm3, Cklfsf3
Domain Architecture
Description	CKLF-like MARVEL transmembrane domain-containing protein 3 (Chemokine- like factor superfamily member 3).

CO4A1_MOUSE
θ value	5.27518 (rank : 19)	NC score	0.024052 (rank : 17)
Query Neighborhood Hits	25	Target Neighborhood Hits	450	Shared Neighborhood Hits	14
SwissProt Accessions	P02463	Gene names	Col4a1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

CO4A2_MOUSE
θ value	5.27518 (rank : 20)	NC score	0.022379 (rank : 18)
Query Neighborhood Hits	25	Target Neighborhood Hits	492	Shared Neighborhood Hits	12
SwissProt Accessions	P08122, Q61375	Gene names	Col4a2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

CLIC6_HUMAN
θ value	6.88961 (rank : 21)	NC score	0.012357 (rank : 24)
Query Neighborhood Hits	25	Target Neighborhood Hits	289	Shared Neighborhood Hits	12
SwissProt Accessions	Q96NY7, Q8IX31	Gene names	CLIC6, CLIC1L
Domain Architecture	No domain graphic available
Description	Chloride intracellular channel 6.

JUNB_MOUSE
θ value	6.88961 (rank : 22)	NC score	0.015226 (rank : 22)
Query Neighborhood Hits	25	Target Neighborhood Hits	116	Shared Neighborhood Hits	3
SwissProt Accessions	P09450, Q8C2G9	Gene names	Junb, Jun-b
Domain Architecture
Description	Transcription factor jun-B.

ZN326_MOUSE
θ value	6.88961 (rank : 23)	NC score	0.010635 (rank : 25)
Query Neighborhood Hits	25	Target Neighborhood Hits	117	Shared Neighborhood Hits	3
SwissProt Accessions	O88291, Q8BSJ5, Q8K1X9, Q9CYG9	Gene names	Znf326, Zan75, Zfp326
Domain Architecture	No domain graphic available
Description	Zinc finger protein 326 (Zinc finger protein-associated with nuclear matrix of 75 kDa).

CO9A2_HUMAN
θ value	8.99809 (rank : 24)	NC score	0.026377 (rank : 15)
Query Neighborhood Hits	25	Target Neighborhood Hits	261	Shared Neighborhood Hits	11
SwissProt Accessions	Q14055	Gene names	COL9A2
Domain Architecture	No domain graphic available
Description	Collagen alpha-2(IX) chain precursor.

COJA1_HUMAN
θ value	8.99809 (rank : 25)	NC score	0.024242 (rank : 16)
Query Neighborhood Hits	25	Target Neighborhood Hits	323	Shared Neighborhood Hits	12
SwissProt Accessions	Q14993, Q00559, Q05850, Q12885, Q13676, Q5JUF0, Q5T424, Q9H572, Q9NPZ2, Q9NQP2	Gene names	COL19A1
Domain Architecture
Description	Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y) chain).

Hits sorted by NC score

SYPH_MOUSE
NC score	0.999962 (rank : 1)	θ value	1.86652e-130 (rank : 1)
Query Neighborhood Hits	25	Target Neighborhood Hits	25	Shared Neighborhood Hits	25
SwissProt Accessions	Q62277, Q8BRQ0, Q91WI8	Gene names	Syp
Domain Architecture
Description	Synaptophysin (Major synaptic vesicle protein p38) (BM89 antigen).

SYPH_HUMAN
NC score	0.997807 (rank : 2)	θ value	4.45295e-124 (rank : 2)
Query Neighborhood Hits	25	Target Neighborhood Hits	20	Shared Neighborhood Hits	18
SwissProt Accessions	P08247, Q6P2F7	Gene names	SYP
Domain Architecture
Description	Synaptophysin (Major synaptic vesicle protein p38).

SYNPR_HUMAN
NC score	0.977730 (rank : 3)	θ value	1.90147e-66 (rank : 4)
Query Neighborhood Hits	25	Target Neighborhood Hits	16	Shared Neighborhood Hits	9
SwissProt Accessions	Q8TBG9	Gene names	SYNPR
Domain Architecture
Description	Synaptoporin.

SYNPR_MOUSE
NC score	0.976478 (rank : 4)	θ value	8.53533e-67 (rank : 3)
Query Neighborhood Hits	25	Target Neighborhood Hits	15	Shared Neighborhood Hits	9
SwissProt Accessions	Q8BGN8, Q8C5J4, Q9DB89	Gene names	Synpr
Domain Architecture
Description	Synaptoporin.

SYPL2_HUMAN
NC score	0.967686 (rank : 5)	θ value	6.55044e-59 (rank : 5)
Query Neighborhood Hits	25	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	Q5VXT5, Q6ZMX1	Gene names	SYPL2
Domain Architecture	No domain graphic available
Description	Synaptophysin-like protein 2.

SYPL2_MOUSE
NC score	0.966362 (rank : 6)	θ value	2.7521e-57 (rank : 6)
Query Neighborhood Hits	25	Target Neighborhood Hits	12	Shared Neighborhood Hits	8
SwissProt Accessions	O89104	Gene names	Sypl2, Mg29
Domain Architecture
Description	Synaptophysin-like protein 2 (Mitsugumin-29) (Mg29).

SYPL1_MOUSE
NC score	0.959887 (rank : 7)	θ value	5.93839e-52 (rank : 8)
Query Neighborhood Hits	25	Target Neighborhood Hits	11	Shared Neighborhood Hits	8
SwissProt Accessions	O09117, Q8BQI8, Q8BQJ1, Q8C749	Gene names	Sypl1, Pphn, Sypl
Domain Architecture
Description	Synaptophysin-like protein 1 (Pantophysin).

SYPL1_HUMAN
NC score	0.959674 (rank : 8)	θ value	2.041e-52 (rank : 7)
Query Neighborhood Hits	25	Target Neighborhood Hits	13	Shared Neighborhood Hits	8
SwissProt Accessions	Q16563, Q96AR8	Gene names	SYPL1, SYPL
Domain Architecture
Description	Synaptophysin-like protein 1 (Pantophysin).

TGBR3_HUMAN
NC score	0.074573 (rank : 9)	θ value	0.0736092 (rank : 9)
Query Neighborhood Hits	25	Target Neighborhood Hits	44	Shared Neighborhood Hits	8
SwissProt Accessions	Q03167, Q5T2T4, Q5U731, Q9UGI2	Gene names	TGFBR3
Domain Architecture
Description	TGF-beta receptor type III precursor (TGFR-3) (Transforming growth factor beta receptor III) (Betaglycan).

EWS_MOUSE
NC score	0.040125 (rank : 10)	θ value	0.62314 (rank : 12)
Query Neighborhood Hits	25	Target Neighborhood Hits	271	Shared Neighborhood Hits	11
SwissProt Accessions	Q61545	Gene names	Ewsr1, Ews, Ewsh
Domain Architecture
Description	RNA-binding protein EWS.

CO9A1_MOUSE
NC score	0.036424 (rank : 11)	θ value	0.163984 (rank : 11)
Query Neighborhood Hits	25	Target Neighborhood Hits	477	Shared Neighborhood Hits	15
SwissProt Accessions	Q05722, Q61269, Q61270, Q61433, Q61940	Gene names	Col9a1
Domain Architecture
Description	Collagen alpha-1(IX) chain precursor.

CO5A2_HUMAN
NC score	0.029921 (rank : 12)	θ value	0.163984 (rank : 10)
Query Neighborhood Hits	25	Target Neighborhood Hits	760	Shared Neighborhood Hits	13
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

CO9A1_HUMAN
NC score	0.029848 (rank : 13)	θ value	1.38821 (rank : 13)
Query Neighborhood Hits	25	Target Neighborhood Hits	420	Shared Neighborhood Hits	14
SwissProt Accessions	P20849, Q13699, Q13700, Q5TF52, Q6P467, Q96BM8, Q99225, Q9H151, Q9H152, Q9Y6P2, Q9Y6P3	Gene names	COL9A1
Domain Architecture
Description	Collagen alpha-1(IX) chain precursor.

CO2A1_HUMAN
NC score	0.026944 (rank : 14)	θ value	4.03905 (rank : 16)
Query Neighborhood Hits	25	Target Neighborhood Hits	486	Shared Neighborhood Hits	13
SwissProt Accessions	P02458, Q12985, Q14009, Q14044, Q14046, Q14056, Q14058, Q16672, Q6LBY1, Q6LBY2, Q6LBY3, Q99227, Q9UE38, Q9UE39, Q9UE40, Q9UE41, Q9UE42, Q9UE43	Gene names	COL2A1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO9A2_HUMAN
NC score	0.026377 (rank : 15)	θ value	8.99809 (rank : 24)
Query Neighborhood Hits	25	Target Neighborhood Hits	261	Shared Neighborhood Hits	11
SwissProt Accessions	Q14055	Gene names	COL9A2
Domain Architecture	No domain graphic available
Description	Collagen alpha-2(IX) chain precursor.

COJA1_HUMAN
NC score	0.024242 (rank : 16)	θ value	8.99809 (rank : 25)
Query Neighborhood Hits	25	Target Neighborhood Hits	323	Shared Neighborhood Hits	12
SwissProt Accessions	Q14993, Q00559, Q05850, Q12885, Q13676, Q5JUF0, Q5T424, Q9H572, Q9NPZ2, Q9NQP2	Gene names	COL19A1
Domain Architecture
Description	Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y) chain).

CO4A1_MOUSE
NC score	0.024052 (rank : 17)	θ value	5.27518 (rank : 19)
Query Neighborhood Hits	25	Target Neighborhood Hits	450	Shared Neighborhood Hits	14
SwissProt Accessions	P02463	Gene names	Col4a1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

CO4A2_MOUSE
NC score	0.022379 (rank : 18)	θ value	5.27518 (rank : 20)
Query Neighborhood Hits	25	Target Neighborhood Hits	492	Shared Neighborhood Hits	12
SwissProt Accessions	P08122, Q61375	Gene names	Col4a2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

CO7A1_HUMAN
NC score	0.020818 (rank : 19)	θ value	3.0926 (rank : 14)
Query Neighborhood Hits	25	Target Neighborhood Hits	807	Shared Neighborhood Hits	13
SwissProt Accessions	Q02388, Q14054, Q16507	Gene names	COL7A1
Domain Architecture
Description	Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen).

TBX21_HUMAN
NC score	0.016149 (rank : 20)	θ value	3.0926 (rank : 15)
Query Neighborhood Hits	25	Target Neighborhood Hits	146	Shared Neighborhood Hits	5
SwissProt Accessions	Q9UL17	Gene names	TBX21, TBET, TBLYM
Domain Architecture
Description	T-box transcription factor TBX21 (T-box protein 21) (Transcription factor TBLYM) (T-cell-specific T-box transcription factor T-bet).

CKLF3_MOUSE
NC score	0.016086 (rank : 21)	θ value	5.27518 (rank : 18)
Query Neighborhood Hits	25	Target Neighborhood Hits	18	Shared Neighborhood Hits	2
SwissProt Accessions	Q99LJ5, Q8BJU1, Q9D165	Gene names	Cmtm3, Cklfsf3
Domain Architecture
Description	CKLF-like MARVEL transmembrane domain-containing protein 3 (Chemokine- like factor superfamily member 3).

JUNB_MOUSE
NC score	0.015226 (rank : 22)	θ value	6.88961 (rank : 22)
Query Neighborhood Hits	25	Target Neighborhood Hits	116	Shared Neighborhood Hits	3
SwissProt Accessions	P09450, Q8C2G9	Gene names	Junb, Jun-b
Domain Architecture
Description	Transcription factor jun-B.

HCN1_MOUSE
NC score	0.014298 (rank : 23)	θ value	4.03905 (rank : 17)
Query Neighborhood Hits	25	Target Neighborhood Hits	172	Shared Neighborhood Hits	3
SwissProt Accessions	O88704, O54899, Q9D613	Gene names	Hcn1, Bcng1, Hac2
Domain Architecture
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 (Brain cyclic nucleotide-gated channel 1) (BCNG-1) (Hyperpolarization-activated cation channel 2) (HAC-2).

CLIC6_HUMAN
NC score	0.012357 (rank : 24)	θ value	6.88961 (rank : 21)
Query Neighborhood Hits	25	Target Neighborhood Hits	289	Shared Neighborhood Hits	12
SwissProt Accessions	Q96NY7, Q8IX31	Gene names	CLIC6, CLIC1L
Domain Architecture	No domain graphic available
Description	Chloride intracellular channel 6.

ZN326_MOUSE
NC score	0.010635 (rank : 25)	θ value	6.88961 (rank : 23)
Query Neighborhood Hits	25	Target Neighborhood Hits	117	Shared Neighborhood Hits	3
SwissProt Accessions	O88291, Q8BSJ5, Q8K1X9, Q9CYG9	Gene names	Znf326, Zan75, Zfp326
Domain Architecture	No domain graphic available
Description	Zinc finger protein 326 (Zinc finger protein-associated with nuclear matrix of 75 kDa).