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Network neighborhood for query Sequence : ROD1_HUMAN

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ROD1_HUMAN
SwissProt Accessions	O95758, Q86YB3, Q86YH9	Gene names	ROD1
Domain Architecture	No domain graphic available
Description	Regulator of differentiation 1 (Rod1).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

PTBP1_HUMAN
θ value	0 (rank : 1)	NC score	0.975550 (rank : 6)
Query Neighborhood Hits	60	Target Neighborhood Hits	103	Shared Neighborhood Hits	46
SwissProt Accessions	P26599	Gene names	PTBP1, PTB
Domain Architecture
Description	Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) (57 kDa RNA-binding protein PPTB-1).

PTBP1_MOUSE
θ value	0 (rank : 2)	NC score	0.988258 (rank : 3)
Query Neighborhood Hits	60	Target Neighborhood Hits	63	Shared Neighborhood Hits	39
SwissProt Accessions	P17225	Gene names	Ptbp1, Ptb
Domain Architecture
Description	Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I).

PTBP2_HUMAN
θ value	0 (rank : 3)	NC score	0.982471 (rank : 4)
Query Neighborhood Hits	60	Target Neighborhood Hits	89	Shared Neighborhood Hits	46
SwissProt Accessions	Q9UKA9, Q8N0Z1, Q8N160, Q8NFB0, Q8NFB1, Q969N9, Q96Q76	Gene names	PTBP2, NPTB, PTB, PTBLP
Domain Architecture	No domain graphic available
Description	Polypyrimidine tract-binding protein 2 (Neurally-enriched homolog of PTB) (Neural polypyrimidine tract-binding protein) (PTB-like protein).

PTBP2_MOUSE
θ value	0 (rank : 4)	NC score	0.982377 (rank : 5)
Query Neighborhood Hits	60	Target Neighborhood Hits	89	Shared Neighborhood Hits	46
SwissProt Accessions	Q91Z31, Q7TNW7, Q9CUW2, Q9QYC2, Q9R0V9	Gene names	Ptbp2, Brptb, Nptb
Domain Architecture	No domain graphic available
Description	Polypyrimidine tract-binding protein 2 (Brain-enriched polypyrimidine tract-binding protein) (Brain-enriched PTB) (RRM-type RNA-binding protein brPTB) (Neural polypyrimidine tract-binding protein).

ROD1_HUMAN
θ value	0 (rank : 5)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	60	Target Neighborhood Hits	60	Shared Neighborhood Hits	60
SwissProt Accessions	O95758, Q86YB3, Q86YH9	Gene names	ROD1
Domain Architecture	No domain graphic available
Description	Regulator of differentiation 1 (Rod1).

ROD1_MOUSE
θ value	0 (rank : 6)	NC score	0.998290 (rank : 2)
Query Neighborhood Hits	60	Target Neighborhood Hits	59	Shared Neighborhood Hits	53
SwissProt Accessions	Q8BHD7, Q923C3	Gene names	Rod1
Domain Architecture	No domain graphic available
Description	Regulator of differentiation 1 (Rod1).

HNRLL_MOUSE
θ value	5.96599e-36 (rank : 7)	NC score	0.799804 (rank : 8)
Query Neighborhood Hits	60	Target Neighborhood Hits	63	Shared Neighborhood Hits	16
SwissProt Accessions	Q921F4, Q8BIP6, Q99J40	Gene names	Hnrpll
Domain Architecture	No domain graphic available
Description	Heterogeneous nuclear ribonucleoprotein L-like.

HNRLL_HUMAN
θ value	2.96089e-35 (rank : 8)	NC score	0.802813 (rank : 7)
Query Neighborhood Hits	60	Target Neighborhood Hits	25	Shared Neighborhood Hits	14
SwissProt Accessions	Q8WVV9, Q659B9, Q8IVH5, Q8IVH6, Q96HR5	Gene names	HNRPLL, SRRF
Domain Architecture	No domain graphic available
Description	Heterogeneous nuclear ribonucleoprotein L-like (Stromal RNA-regulating factor) (BLOCK24 protein).

HNRPL_HUMAN
θ value	3.86705e-35 (rank : 9)	NC score	0.766507 (rank : 9)
Query Neighborhood Hits	60	Target Neighborhood Hits	36	Shared Neighborhood Hits	15
SwissProt Accessions	P14866, Q9H3P3	Gene names	HNRPL
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein L (hnRNP L).

HNRPL_MOUSE
θ value	6.59618e-35 (rank : 10)	NC score	0.765728 (rank : 10)
Query Neighborhood Hits	60	Target Neighborhood Hits	34	Shared Neighborhood Hits	14
SwissProt Accessions	Q8R081, O54789, Q8K0S7	Gene names	Hnrpl
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein L (hnRNP L).

MATR3_HUMAN
θ value	1.09739e-05 (rank : 11)	NC score	0.308785 (rank : 12)
Query Neighborhood Hits	60	Target Neighborhood Hits	325	Shared Neighborhood Hits	18
SwissProt Accessions	P43243, Q9UHW0, Q9UQ27	Gene names	MATR3, KIAA0723
Domain Architecture
Description	Matrin-3.

MATR3_MOUSE
θ value	1.09739e-05 (rank : 12)	NC score	0.311313 (rank : 11)
Query Neighborhood Hits	60	Target Neighborhood Hits	321	Shared Neighborhood Hits	18
SwissProt Accessions	Q8K310	Gene names	Matr3
Domain Architecture	No domain graphic available
Description	Matrin-3.

ELAV4_MOUSE
θ value	9.29e-05 (rank : 13)	NC score	0.155041 (rank : 17)
Query Neighborhood Hits	60	Target Neighborhood Hits	216	Shared Neighborhood Hits	36
SwissProt Accessions	Q61701, O55010	Gene names	Elavl4, Hud
Domain Architecture
Description	ELAV-like protein 4 (Paraneoplastic encephalomyelitis antigen HuD) (Hu-antigen D).

ELAV4_HUMAN
θ value	0.000158464 (rank : 14)	NC score	0.153747 (rank : 18)
Query Neighborhood Hits	60	Target Neighborhood Hits	217	Shared Neighborhood Hits	36
SwissProt Accessions	P26378, Q96J74	Gene names	ELAVL4, HUD, PNEM
Domain Architecture
Description	ELAV-like protein 4 (Paraneoplastic encephalomyelitis antigen HuD) (Hu-antigen D).

ZN638_HUMAN
θ value	0.00509761 (rank : 15)	NC score	0.184435 (rank : 16)
Query Neighborhood Hits	60	Target Neighborhood Hits	343	Shared Neighborhood Hits	16
SwissProt Accessions	Q14966, Q53R34, Q5XJ05, Q68DP3, Q6P2H2, Q7Z3T7, Q8NF92, Q8TCA1, Q9H2G1, Q9NP37	Gene names	ZNF638, NP220, ZFML
Domain Architecture	No domain graphic available
Description	Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger matrin-like protein) (Cutaneous T-cell lymphoma-associated antigen se33-1) (CTCL tumor antigen se33-1).

HTSF1_HUMAN
θ value	0.0113563 (rank : 16)	NC score	0.128998 (rank : 29)
Query Neighborhood Hits	60	Target Neighborhood Hits	408	Shared Neighborhood Hits	34
SwissProt Accessions	O43719, Q59G06, Q99730	Gene names	HTATSF1
Domain Architecture	No domain graphic available
Description	HIV Tat-specific factor 1 (Tat-SF1).

ZN638_MOUSE
θ value	0.0148317 (rank : 17)	NC score	0.198510 (rank : 15)
Query Neighborhood Hits	60	Target Neighborhood Hits	318	Shared Neighborhood Hits	20
SwissProt Accessions	Q61464, Q6DFV9, Q8C941	Gene names	Znf638, Np220, Zfml
Domain Architecture	No domain graphic available
Description	Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger matrin-like protein).

ELAV3_HUMAN
θ value	0.0252991 (rank : 18)	NC score	0.148338 (rank : 20)
Query Neighborhood Hits	60	Target Neighborhood Hits	217	Shared Neighborhood Hits	36
SwissProt Accessions	Q14576, Q16135, Q96CL8, Q96QS9	Gene names	ELAVL3, HUC, PLE21
Domain Architecture
Description	ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21).

ELAV3_MOUSE
θ value	0.0252991 (rank : 19)	NC score	0.146292 (rank : 26)
Query Neighborhood Hits	60	Target Neighborhood Hits	213	Shared Neighborhood Hits	35
SwissProt Accessions	Q60900, Q60901	Gene names	Elavl3, Huc
Domain Architecture
Description	ELAV-like protein 3 (Hu-antigen C) (HuC).

RBM19_HUMAN
θ value	0.0330416 (rank : 20)	NC score	0.105865 (rank : 37)
Query Neighborhood Hits	60	Target Neighborhood Hits	331	Shared Neighborhood Hits	41
SwissProt Accessions	Q9Y4C8, Q9BPY6, Q9UFN5	Gene names	RBM19, KIAA0682
Domain Architecture
Description	Probable RNA-binding protein 19 (RNA-binding motif protein 19).

ELAV1_HUMAN
θ value	0.0431538 (rank : 21)	NC score	0.131039 (rank : 28)
Query Neighborhood Hits	60	Target Neighborhood Hits	225	Shared Neighborhood Hits	35
SwissProt Accessions	Q15717, Q9BTT1	Gene names	ELAVL1, HUR
Domain Architecture
Description	ELAV-like protein 1 (Hu-antigen R) (HuR).

ELAV2_HUMAN
θ value	0.0431538 (rank : 22)	NC score	0.146839 (rank : 25)
Query Neighborhood Hits	60	Target Neighborhood Hits	218	Shared Neighborhood Hits	36
SwissProt Accessions	Q12926, Q13235, Q59G15, Q8NEM4, Q9H1Q8	Gene names	ELAVL2, HUB
Domain Architecture
Description	ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1).

ELAV2_MOUSE
θ value	0.0563607 (rank : 23)	NC score	0.147177 (rank : 24)
Query Neighborhood Hits	60	Target Neighborhood Hits	218	Shared Neighborhood Hits	36
SwissProt Accessions	Q60899	Gene names	Elavl2, Hub
Domain Architecture
Description	ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1).

NONO_HUMAN
θ value	0.0563607 (rank : 24)	NC score	0.147344 (rank : 23)
Query Neighborhood Hits	60	Target Neighborhood Hits	441	Shared Neighborhood Hits	36
SwissProt Accessions	Q15233, O00201, P30807, Q12786, Q9BQC5	Gene names	NONO, NRB54
Domain Architecture
Description	Non-POU domain-containing octamer-binding protein (NonO protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit).

NONO_MOUSE
θ value	0.0563607 (rank : 25)	NC score	0.148755 (rank : 19)
Query Neighborhood Hits	60	Target Neighborhood Hits	444	Shared Neighborhood Hits	36
SwissProt Accessions	Q99K48, Q63887, Q9CYQ4, Q9DBP2	Gene names	Nono
Domain Architecture	No domain graphic available
Description	Non-POU domain-containing octamer-binding protein (NonO protein).

RU2B_HUMAN
θ value	0.0736092 (rank : 26)	NC score	0.209438 (rank : 13)
Query Neighborhood Hits	60	Target Neighborhood Hits	94	Shared Neighborhood Hits	23
SwissProt Accessions	P08579, Q9UJD4	Gene names	SNRPB2
Domain Architecture
Description	U2 small nuclear ribonucleoprotein B''.

RU2B_MOUSE
θ value	0.0736092 (rank : 27)	NC score	0.206925 (rank : 14)
Query Neighborhood Hits	60	Target Neighborhood Hits	96	Shared Neighborhood Hits	23
SwissProt Accessions	Q9CQI7, Q9CW35, Q9CZ66	Gene names	Snrpb2
Domain Architecture	No domain graphic available
Description	U2 small nuclear ribonucleoprotein B''.

HTSF1_MOUSE
θ value	0.21417 (rank : 28)	NC score	0.110145 (rank : 32)
Query Neighborhood Hits	60	Target Neighborhood Hits	425	Shared Neighborhood Hits	31
SwissProt Accessions	Q8BGC0, Q1WWK0, Q9CT41, Q9DAU3	Gene names	Htatsf1
Domain Architecture	No domain graphic available
Description	HIV Tat-specific factor 1 homolog.

RBM7_HUMAN
θ value	0.21417 (rank : 29)	NC score	0.148315 (rank : 21)
Query Neighborhood Hits	60	Target Neighborhood Hits	173	Shared Neighborhood Hits	32
SwissProt Accessions	Q9Y580	Gene names	RBM7
Domain Architecture
Description	RNA-binding protein 7 (RNA-binding motif protein 7).

NKX26_MOUSE
θ value	0.279714 (rank : 30)	NC score	0.017701 (rank : 90)
Query Neighborhood Hits	60	Target Neighborhood Hits	343	Shared Neighborhood Hits	3
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

SNRPA_MOUSE
θ value	0.279714 (rank : 31)	NC score	0.117517 (rank : 31)
Query Neighborhood Hits	60	Target Neighborhood Hits	129	Shared Neighborhood Hits	25
SwissProt Accessions	Q62189, Q52LA2	Gene names	Snrpa, Rnu1a-1
Domain Architecture
Description	U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A protein) (U1-A).

RBM19_MOUSE
θ value	0.365318 (rank : 32)	NC score	0.108144 (rank : 35)
Query Neighborhood Hits	60	Target Neighborhood Hits	296	Shared Neighborhood Hits	40
SwissProt Accessions	Q8R3C6, Q8BHR0, Q9CW63	Gene names	Rbm19
Domain Architecture	No domain graphic available
Description	Probable RNA-binding protein 19 (RNA-binding motif protein 19).

SAFB1_HUMAN
θ value	0.365318 (rank : 33)	NC score	0.082355 (rank : 47)
Query Neighborhood Hits	60	Target Neighborhood Hits	493	Shared Neighborhood Hits	31
SwissProt Accessions	Q15424, O60406, Q59HH8	Gene names	SAFB, HAP, HET, SAFB1
Domain Architecture
Description	Scaffold attachment factor B (Scaffold attachment factor B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE- TATA-binding protein).

ZCRB1_HUMAN
θ value	0.47712 (rank : 34)	NC score	0.148279 (rank : 22)
Query Neighborhood Hits	60	Target Neighborhood Hits	230	Shared Neighborhood Hits	42
SwissProt Accessions	Q8TBF4, Q6PJX0	Gene names	ZCRB1
Domain Architecture	No domain graphic available
Description	Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (U11/U12 snRNP 31 kDa protein) (U11/U12-31K).

RBM7_MOUSE
θ value	0.62314 (rank : 35)	NC score	0.135437 (rank : 27)
Query Neighborhood Hits	60	Target Neighborhood Hits	182	Shared Neighborhood Hits	33
SwissProt Accessions	Q9CQT2, Q3UB91, Q7TQE3	Gene names	Rbm7
Domain Architecture	No domain graphic available
Description	RNA-binding protein 7 (RNA-binding motif protein 7).

CO4A2_MOUSE
θ value	1.06291 (rank : 36)	NC score	0.011751 (rank : 93)
Query Neighborhood Hits	60	Target Neighborhood Hits	492	Shared Neighborhood Hits	8
SwissProt Accessions	P08122, Q61375	Gene names	Col4a2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

ZCRB1_MOUSE
θ value	1.06291 (rank : 37)	NC score	0.121036 (rank : 30)
Query Neighborhood Hits	60	Target Neighborhood Hits	218	Shared Neighborhood Hits	41
SwissProt Accessions	Q9CZ96, Q3TDL3	Gene names	Zcrb1
Domain Architecture	No domain graphic available
Description	Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (MADP-1).

MUC5B_HUMAN
θ value	1.38821 (rank : 38)	NC score	0.011191 (rank : 94)
Query Neighborhood Hits	60	Target Neighborhood Hits	1020	Shared Neighborhood Hits	7
SwissProt Accessions	Q9HC84, O00447, O00573, O14985, O15494, O95291, O95451, Q14881, Q99552, Q9UE28	Gene names	MUC5B, MUC5
Domain Architecture
Description	Mucin-5B precursor (Mucin-5 subtype B, tracheobronchial) (High molecular weight salivary mucin MG1) (Sublingual gland mucin).

PM14_HUMAN
θ value	1.38821 (rank : 39)	NC score	0.109602 (rank : 33)
Query Neighborhood Hits	60	Target Neighborhood Hits	134	Shared Neighborhood Hits	33
SwissProt Accessions	Q9Y3B4	Gene names	SF3B14
Domain Architecture
Description	Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit).

PM14_MOUSE
θ value	1.38821 (rank : 40)	NC score	0.109602 (rank : 34)
Query Neighborhood Hits	60	Target Neighborhood Hits	134	Shared Neighborhood Hits	33
SwissProt Accessions	P59708, Q3U9T9	Gene names	Sf3b14
Domain Architecture
Description	Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit).

COJA1_HUMAN
θ value	1.81305 (rank : 41)	NC score	0.014211 (rank : 91)
Query Neighborhood Hits	60	Target Neighborhood Hits	323	Shared Neighborhood Hits	6
SwissProt Accessions	Q14993, Q00559, Q05850, Q12885, Q13676, Q5JUF0, Q5T424, Q9H572, Q9NPZ2, Q9NQP2	Gene names	COL19A1
Domain Architecture
Description	Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y) chain).

ELAV1_MOUSE
θ value	1.81305 (rank : 42)	NC score	0.107808 (rank : 36)
Query Neighborhood Hits	60	Target Neighborhood Hits	219	Shared Neighborhood Hits	32
SwissProt Accessions	P70372, Q60745	Gene names	Elavl1, Elra, Hua
Domain Architecture
Description	ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like generic protein) (MelG).

RXRA_HUMAN
θ value	2.36792 (rank : 43)	NC score	0.003870 (rank : 98)
Query Neighborhood Hits	60	Target Neighborhood Hits	223	Shared Neighborhood Hits	5
SwissProt Accessions	P19793, Q2V504	Gene names	RXRA, NR2B1
Domain Architecture
Description	Retinoic acid receptor RXR-alpha (Retinoid X receptor alpha).

P3C2G_MOUSE
θ value	3.0926 (rank : 44)	NC score	0.021423 (rank : 87)
Query Neighborhood Hits	60	Target Neighborhood Hits	113	Shared Neighborhood Hits	6
SwissProt Accessions	O70167, O70168	Gene names	Pik3c2g
Domain Architecture
Description	Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing gamma polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2 gamma) (PI3K-C2gamma).

RBMS1_MOUSE
θ value	3.0926 (rank : 45)	NC score	0.074676 (rank : 49)
Query Neighborhood Hits	60	Target Neighborhood Hits	192	Shared Neighborhood Hits	25
SwissProt Accessions	Q91W59, Q6PEU6, Q6PHC2, Q9WTK4	Gene names	Rbms1, Mssp, Mssp1
Domain Architecture	No domain graphic available
Description	RNA-binding motif, single-stranded-interacting protein 1 (Single- stranded DNA-binding protein MSSP-1).

IF39_MOUSE
θ value	4.03905 (rank : 46)	NC score	0.046381 (rank : 83)
Query Neighborhood Hits	60	Target Neighborhood Hits	206	Shared Neighborhood Hits	18
SwissProt Accessions	Q8JZQ9, Q922K2	Gene names	Eif3s9
Domain Architecture	No domain graphic available
Description	Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116).

SFRS2_HUMAN
θ value	4.03905 (rank : 47)	NC score	0.095314 (rank : 43)
Query Neighborhood Hits	60	Target Neighborhood Hits	222	Shared Neighborhood Hits	35
SwissProt Accessions	Q01130	Gene names	SFRS2
Domain Architecture
Description	Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) (Protein PR264).

SFRS2_MOUSE
θ value	4.03905 (rank : 48)	NC score	0.095314 (rank : 44)
Query Neighborhood Hits	60	Target Neighborhood Hits	222	Shared Neighborhood Hits	35
SwissProt Accessions	Q62093, Q542L3, Q60701	Gene names	Sfrs2, Pr264, Sfrs10
Domain Architecture
Description	Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) (Protein PR264) (Putative myelin regulatory factor 1) (MRF-1).

ACINU_HUMAN
θ value	5.27518 (rank : 49)	NC score	0.018256 (rank : 89)
Query Neighborhood Hits	60	Target Neighborhood Hits	828	Shared Neighborhood Hits	9
SwissProt Accessions	Q9UKV3, O75158, Q9UG91, Q9UKV1, Q9UKV2	Gene names	ACIN1, ACINUS, KIAA0670
Domain Architecture
Description	Apoptotic chromatin condensation inducer in the nucleus (Acinus).

ACINU_MOUSE
θ value	5.27518 (rank : 50)	NC score	0.018424 (rank : 88)
Query Neighborhood Hits	60	Target Neighborhood Hits	712	Shared Neighborhood Hits	8
SwissProt Accessions	Q9JIX8, Q9CSN7, Q9CSR9, Q9CSX7, Q9R046, Q9R047	Gene names	Acin1, Acinus
Domain Architecture
Description	Apoptotic chromatin condensation inducer in the nucleus (Acinus).

CO8A2_MOUSE
θ value	5.27518 (rank : 51)	NC score	0.009288 (rank : 96)
Query Neighborhood Hits	60	Target Neighborhood Hits	273	Shared Neighborhood Hits	5
SwissProt Accessions	P25318, Q68ED0, Q6KAQ4, Q6P1C4	Gene names	Col8a2
Domain Architecture	No domain graphic available
Description	Collagen alpha-2(VIII) chain precursor (Endothelial collagen).

RBMS1_HUMAN
θ value	5.27518 (rank : 52)	NC score	0.069495 (rank : 51)
Query Neighborhood Hits	60	Target Neighborhood Hits	190	Shared Neighborhood Hits	24
SwissProt Accessions	P29558, Q15433, Q8WV20	Gene names	RBMS1, MSSP, MSSP1, SCR2
Domain Architecture
Description	RNA-binding motif, single-stranded-interacting protein 1 (Single- stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA- binding motif 2).

CO4A2_HUMAN
θ value	6.88961 (rank : 53)	NC score	0.009733 (rank : 95)
Query Neighborhood Hits	60	Target Neighborhood Hits	454	Shared Neighborhood Hits	7
SwissProt Accessions	P08572	Gene names	COL4A2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

IF39_HUMAN
θ value	6.88961 (rank : 54)	NC score	0.033275 (rank : 86)
Query Neighborhood Hits	60	Target Neighborhood Hits	187	Shared Neighborhood Hits	12
SwissProt Accessions	P55884, Q9UMF9	Gene names	EIF3S9
Domain Architecture
Description	Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1).

MINT_HUMAN
θ value	6.88961 (rank : 55)	NC score	0.041563 (rank : 84)
Query Neighborhood Hits	60	Target Neighborhood Hits	1291	Shared Neighborhood Hits	44
SwissProt Accessions	Q96T58, Q9H9A8, Q9NWH5, Q9UQ01, Q9Y556	Gene names	SPEN, KIAA0929, MINT, SHARP
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

SYNG_HUMAN
θ value	6.88961 (rank : 56)	NC score	0.012996 (rank : 92)
Query Neighborhood Hits	60	Target Neighborhood Hits	160	Shared Neighborhood Hits	4
SwissProt Accessions	Q9UMZ2, Q6ZT17	Gene names	AP1GBP1, SYNG
Domain Architecture	No domain graphic available
Description	AP1 subunit gamma-binding protein 1 (Gamma-synergin).

ATX1_MOUSE
θ value	8.99809 (rank : 57)	NC score	0.006982 (rank : 97)
Query Neighborhood Hits	60	Target Neighborhood Hits	264	Shared Neighborhood Hits	5
SwissProt Accessions	P54254	Gene names	Atxn1, Sca1
Domain Architecture
Description	Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog).

MINT_MOUSE
θ value	8.99809 (rank : 58)	NC score	0.038692 (rank : 85)
Query Neighborhood Hits	60	Target Neighborhood Hits	1514	Shared Neighborhood Hits	45
SwissProt Accessions	Q62504, Q80TN9, Q99PS4, Q9QZW2	Gene names	Spen, Kiaa0929, Mint, Sharp
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

SFRS3_HUMAN
θ value	8.99809 (rank : 59)	NC score	0.052107 (rank : 78)
Query Neighborhood Hits	60	Target Neighborhood Hits	151	Shared Neighborhood Hits	32
SwissProt Accessions	P84103, O08831, P23152	Gene names	SFRS3, SRP20
Domain Architecture	No domain graphic available
Description	Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing factor SRP20).

SFRS3_MOUSE
θ value	8.99809 (rank : 60)	NC score	0.052107 (rank : 79)
Query Neighborhood Hits	60	Target Neighborhood Hits	151	Shared Neighborhood Hits	32
SwissProt Accessions	P84104, O08831, P23152, Q564E9	Gene names	Sfrs3, Srp20, X16
Domain Architecture	No domain graphic available
Description	Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing factor SRP20) (X16 protein).

ACF_MOUSE
θ value	θ > 10 (rank : 61)	NC score	0.057337 (rank : 60)
Query Neighborhood Hits	60	Target Neighborhood Hits	205	Shared Neighborhood Hits	36
SwissProt Accessions	Q5YD48, Q5FW55, Q5YD47	Gene names	Acf, Asp
Domain Architecture	No domain graphic available
Description	APOBEC1 complementation factor (APOBEC1-stimulating protein).

DRBP1_HUMAN
θ value	θ > 10 (rank : 62)	NC score	0.094843 (rank : 45)
Query Neighborhood Hits	60	Target Neighborhood Hits	166	Shared Neighborhood Hits	27
SwissProt Accessions	Q8IUH3, Q6NYL0, Q8NFC9	Gene names	DRBP1, DRB1
Domain Architecture	No domain graphic available
Description	Developmentally-regulated RNA-binding protein 1 (RB-1).

DRBP1_MOUSE
θ value	θ > 10 (rank : 63)	NC score	0.085569 (rank : 46)
Query Neighborhood Hits	60	Target Neighborhood Hits	169	Shared Neighborhood Hits	27
SwissProt Accessions	Q8BHN5, Q8C1Z5	Gene names	Drbp1, Drb1
Domain Architecture	No domain graphic available
Description	Developmentally-regulated RNA-binding protein 1 (RB-1).

FUSIP_HUMAN
θ value	θ > 10 (rank : 64)	NC score	0.050246 (rank : 81)
Query Neighborhood Hits	60	Target Neighborhood Hits	230	Shared Neighborhood Hits	34
SwissProt Accessions	O75494, O60572, Q96G09, Q96P17	Gene names	FUSIP1, TASR
Domain Architecture
Description	FUS-interacting serine-arginine-rich protein 1 (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor protein) (SRrp40) (Splicing factor SRp38).

FUSIP_MOUSE
θ value	θ > 10 (rank : 65)	NC score	0.050246 (rank : 82)
Query Neighborhood Hits	60	Target Neighborhood Hits	230	Shared Neighborhood Hits	34
SwissProt Accessions	Q9R0U0, O70307, O88468, Q3TGW7, Q8CFZ1, Q9R0T9	Gene names	Fusip1, Nssr
Domain Architecture
Description	FUS-interacting serine-arginine-rich protein 1 (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR protein) (Neural-salient serine/arginine-rich protein).

HNRPQ_HUMAN
θ value	θ > 10 (rank : 66)	NC score	0.055002 (rank : 69)
Query Neighborhood Hits	60	Target Neighborhood Hits	236	Shared Neighborhood Hits	35
SwissProt Accessions	O60506, Q53H05, Q5TCG2, Q8IW78, Q8N599, Q96LC1, Q96LC2, Q9Y583	Gene names	SYNCRIP, HNRPQ, NSAP1
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine- and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1).

HNRPQ_MOUSE
θ value	θ > 10 (rank : 67)	NC score	0.051879 (rank : 80)
Query Neighborhood Hits	60	Target Neighborhood Hits	236	Shared Neighborhood Hits	34
SwissProt Accessions	Q7TMK9, O88991, Q80YV6, Q8BGP1, Q8C5K6, Q8CGC2, Q91ZR0, Q99KU9, Q9QYF4	Gene names	Syncrip, Hnrpq, Nsap1, Nsap1l
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine- and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68).

MK67I_HUMAN
θ value	θ > 10 (rank : 68)	NC score	0.066313 (rank : 52)
Query Neighborhood Hits	60	Target Neighborhood Hits	167	Shared Neighborhood Hits	27
SwissProt Accessions	Q9BYG3, Q8TB66, Q96ED4	Gene names	MKI67IP, NIFK, NOPP34
Domain Architecture	No domain graphic available
Description	MKI67 FHA domain-interacting nucleolar phosphoprotein (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34).

NUCL_MOUSE
θ value	θ > 10 (rank : 69)	NC score	0.055732 (rank : 65)
Query Neighborhood Hits	60	Target Neighborhood Hits	425	Shared Neighborhood Hits	36
SwissProt Accessions	P09405, Q548M9, Q61991, Q99K50	Gene names	Ncl, Nuc
Domain Architecture
Description	Nucleolin (Protein C23).

PABP1_HUMAN
θ value	θ > 10 (rank : 70)	NC score	0.056387 (rank : 64)
Query Neighborhood Hits	60	Target Neighborhood Hits	269	Shared Neighborhood Hits	37
SwissProt Accessions	P11940, Q15097, Q93004	Gene names	PABPC1, PAB1, PABP1, PABPC2
Domain Architecture
Description	Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1).

PABP1_MOUSE
θ value	θ > 10 (rank : 71)	NC score	0.057071 (rank : 62)
Query Neighborhood Hits	60	Target Neighborhood Hits	278	Shared Neighborhood Hits	37
SwissProt Accessions	P29341	Gene names	Pabpc1, Pabp1
Domain Architecture
Description	Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1).

PABP3_HUMAN
θ value	θ > 10 (rank : 72)	NC score	0.052974 (rank : 74)
Query Neighborhood Hits	60	Target Neighborhood Hits	259	Shared Neighborhood Hits	38
SwissProt Accessions	Q9H361, Q8NHV0, Q9H086	Gene names	PABPC3, PABP3, PABPL3
Domain Architecture
Description	Polyadenylate-binding protein 3 (Poly(A)-binding protein 3) (PABP 3) (Testis-specific poly(A)-binding protein).

PABP4_HUMAN
θ value	θ > 10 (rank : 73)	NC score	0.053080 (rank : 73)
Query Neighborhood Hits	60	Target Neighborhood Hits	268	Shared Neighborhood Hits	37
SwissProt Accessions	Q13310, Q6P0N3	Gene names	PABPC4, APP1, PABP4
Domain Architecture
Description	Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1).

PABP5_HUMAN
θ value	θ > 10 (rank : 74)	NC score	0.063529 (rank : 54)
Query Neighborhood Hits	60	Target Neighborhood Hits	212	Shared Neighborhood Hits	34
SwissProt Accessions	Q96DU9, Q6P529, Q9UFE5	Gene names	PABPC5, PABP5
Domain Architecture
Description	Polyadenylate-binding protein 5 (Poly(A)-binding protein 5) (PABP 5).

RBM11_HUMAN
θ value	θ > 10 (rank : 75)	NC score	0.055326 (rank : 67)
Query Neighborhood Hits	60	Target Neighborhood Hits	149	Shared Neighborhood Hits	29
SwissProt Accessions	P57052	Gene names	RBM11
Domain Architecture
Description	Putative RNA-binding protein 11 (RNA-binding motif protein 11).

RBM14_HUMAN
θ value	θ > 10 (rank : 76)	NC score	0.052114 (rank : 77)
Query Neighborhood Hits	60	Target Neighborhood Hits	213	Shared Neighborhood Hits	28
SwissProt Accessions	Q96PK6, O75932, Q53GV1, Q68DQ9, Q96PK5	Gene names	RBM14, SIP
Domain Architecture	No domain graphic available
Description	RNA-binding protein 14 (RNA-binding motif protein 14) (RRM-containing coactivator activator/modulator) (Synaptotagmin-interacting protein) (SYT-interacting protein).

RBM14_MOUSE
θ value	θ > 10 (rank : 77)	NC score	0.057335 (rank : 61)
Query Neighborhood Hits	60	Target Neighborhood Hits	217	Shared Neighborhood Hits	29
SwissProt Accessions	Q8C2Q3, Q3TJB6, Q91Z21, Q9DBI6	Gene names	Rbm14
Domain Architecture	No domain graphic available
Description	RNA-binding protein 14 (RNA-binding motif protein 14).

RBM23_HUMAN
θ value	θ > 10 (rank : 78)	NC score	0.065392 (rank : 53)
Query Neighborhood Hits	60	Target Neighborhood Hits	235	Shared Neighborhood Hits	38
SwissProt Accessions	Q86U06, Q8ND16, Q8TB88, Q8WY40, Q9BUJ1, Q9NVV7	Gene names	RBM23, RNPC4
Domain Architecture
Description	Probable RNA-binding protein 23 (RNA-binding motif protein 23) (RNA- binding region-containing protein 4) (Splicing factor SF2).

RBM28_MOUSE
θ value	θ > 10 (rank : 79)	NC score	0.053471 (rank : 70)
Query Neighborhood Hits	60	Target Neighborhood Hits	368	Shared Neighborhood Hits	36
SwissProt Accessions	Q8CGC6, Q8BG25, Q8VEJ8, Q9CS22, Q9CSE6	Gene names	Rbm28
Domain Architecture	No domain graphic available
Description	RNA-binding protein 28 (RNA-binding motif protein 28).

RBM4B_HUMAN
θ value	θ > 10 (rank : 80)	NC score	0.095962 (rank : 40)
Query Neighborhood Hits	60	Target Neighborhood Hits	219	Shared Neighborhood Hits	32
SwissProt Accessions	Q9BQ04	Gene names	RBM4B, RBM30
Domain Architecture	No domain graphic available
Description	RNA-binding protein 4B (RNA-binding motif protein 4B) (RNA-binding protein 30) (RNA-binding motif protein 30).

RBM4B_MOUSE
θ value	θ > 10 (rank : 81)	NC score	0.095991 (rank : 39)
Query Neighborhood Hits	60	Target Neighborhood Hits	216	Shared Neighborhood Hits	31
SwissProt Accessions	Q8VE92	Gene names	Rbm4b, Rbm30
Domain Architecture	No domain graphic available
Description	RNA-binding protein 4B (RNA-binding motif protein 4B) (RNA-binding protein 30) (RNA-binding motif protein 30).

RBM4_HUMAN
θ value	θ > 10 (rank : 82)	NC score	0.095685 (rank : 42)
Query Neighborhood Hits	60	Target Neighborhood Hits	219	Shared Neighborhood Hits	30
SwissProt Accessions	Q9BWF3, O02916, Q6P1P2, Q8WU85	Gene names	RBM4, RBM4A
Domain Architecture	No domain graphic available
Description	RNA-binding protein 4 (RNA-binding motif protein 4) (RNA-binding motif protein 4a) (Lark homolog) (hLark).

RBM4_MOUSE
θ value	θ > 10 (rank : 83)	NC score	0.095803 (rank : 41)
Query Neighborhood Hits	60	Target Neighborhood Hits	223	Shared Neighborhood Hits	31
SwissProt Accessions	Q8C7Q4, O08752, Q8BN66	Gene names	Rbm4, Rbm4a
Domain Architecture	No domain graphic available
Description	RNA-binding protein 4 (RNA-binding motif protein 4) (RNA-binding motif protein 4a) (Lark homolog) (mLark).

RBMS2_HUMAN
θ value	θ > 10 (rank : 84)	NC score	0.057948 (rank : 58)
Query Neighborhood Hits	60	Target Neighborhood Hits	173	Shared Neighborhood Hits	21
SwissProt Accessions	Q15434	Gene names	RBMS2, SCR3
Domain Architecture	No domain graphic available
Description	RNA-binding motif, single-stranded-interacting protein 2 (Suppressor of CDC2 with RNA-binding motif 3).

RBMS2_MOUSE
θ value	θ > 10 (rank : 85)	NC score	0.057434 (rank : 59)
Query Neighborhood Hits	60	Target Neighborhood Hits	168	Shared Neighborhood Hits	21
SwissProt Accessions	Q8VC70	Gene names	Rbms2
Domain Architecture	No domain graphic available
Description	RNA-binding motif, single-stranded-interacting protein 2.

RBMX2_HUMAN
θ value	θ > 10 (rank : 86)	NC score	0.073454 (rank : 50)
Query Neighborhood Hits	60	Target Neighborhood Hits	351	Shared Neighborhood Hits	36
SwissProt Accessions	Q9Y388, Q5JY82, Q9Y3I8	Gene names	RBMX2
Domain Architecture
Description	RNA-binding motif protein, X-linked 2.

RBMX2_MOUSE
θ value	θ > 10 (rank : 87)	NC score	0.078134 (rank : 48)
Query Neighborhood Hits	60	Target Neighborhood Hits	287	Shared Neighborhood Hits	36
SwissProt Accessions	Q8R0F5, Q3TI42	Gene names	Rbmx2
Domain Architecture
Description	RNA-binding motif protein, X-linked 2.

RBY1A_HUMAN
θ value	θ > 10 (rank : 88)	NC score	0.056771 (rank : 63)
Query Neighborhood Hits	60	Target Neighborhood Hits	245	Shared Neighborhood Hits	34
SwissProt Accessions	Q15414, Q15377, Q8NHR0	Gene names	RBMY1A1, RBM1, YRRM1
Domain Architecture
Description	RNA-binding motif protein, Y chromosome, family 1 member A1 (RNA- binding motif protein 1).

SF3B4_HUMAN
θ value	θ > 10 (rank : 89)	NC score	0.058077 (rank : 57)
Query Neighborhood Hits	60	Target Neighborhood Hits	445	Shared Neighborhood Hits	34
SwissProt Accessions	Q15427	Gene names	SF3B4, SAP49
Domain Architecture
Description	Splicing factor 3B subunit 4 (Spliceosome-associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit).

SFPQ_HUMAN
θ value	θ > 10 (rank : 90)	NC score	0.063110 (rank : 56)
Query Neighborhood Hits	60	Target Neighborhood Hits	986	Shared Neighborhood Hits	35
SwissProt Accessions	P23246, P30808	Gene names	SFPQ, PSF
Domain Architecture
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).

SFPQ_MOUSE
θ value	θ > 10 (rank : 91)	NC score	0.063231 (rank : 55)
Query Neighborhood Hits	60	Target Neighborhood Hits	958	Shared Neighborhood Hits	35
SwissProt Accessions	Q8VIJ6, Q9ERW2	Gene names	Sfpq
Domain Architecture	No domain graphic available
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).

SFRS7_HUMAN
θ value	θ > 10 (rank : 92)	NC score	0.052702 (rank : 75)
Query Neighborhood Hits	60	Target Neighborhood Hits	191	Shared Neighborhood Hits	29
SwissProt Accessions	Q16629	Gene names	SFRS7
Domain Architecture
Description	Splicing factor, arginine/serine-rich 7 (Splicing factor 9G8).

SNRPA_HUMAN
θ value	θ > 10 (rank : 93)	NC score	0.096340 (rank : 38)
Query Neighborhood Hits	60	Target Neighborhood Hits	128	Shared Neighborhood Hits	25
SwissProt Accessions	P09012	Gene names	SNRPA
Domain Architecture
Description	U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A protein) (U1-A).

SRR35_HUMAN
θ value	θ > 10 (rank : 94)	NC score	0.055622 (rank : 66)
Query Neighborhood Hits	60	Target Neighborhood Hits	215	Shared Neighborhood Hits	36
SwissProt Accessions	Q8WXF0, Q8WW25	Gene names	SRRP35
Domain Architecture
Description	35 kDa SR repressor protein (SRrp35).

TIA1_HUMAN
θ value	θ > 10 (rank : 95)	NC score	0.055154 (rank : 68)
Query Neighborhood Hits	60	Target Neighborhood Hits	236	Shared Neighborhood Hits	36
SwissProt Accessions	P31483	Gene names	TIA1
Domain Architecture	No domain graphic available
Description	Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1) (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)].

TIA1_MOUSE
θ value	θ > 10 (rank : 96)	NC score	0.052442 (rank : 76)
Query Neighborhood Hits	60	Target Neighborhood Hits	241	Shared Neighborhood Hits	36
SwissProt Accessions	P52912	Gene names	Tia1, Tia
Domain Architecture
Description	Nucleolysin TIA-1 (RNA-binding protein TIA-1).

TRA2B_HUMAN
θ value	θ > 10 (rank : 97)	NC score	0.053145 (rank : 71)
Query Neighborhood Hits	60	Target Neighborhood Hits	207	Shared Neighborhood Hits	34
SwissProt Accessions	P62995, O15449, Q15815, Q64283	Gene names	SFRS10, TRA2B
Domain Architecture	No domain graphic available
Description	Arginine/serine-rich-splicing factor 10 (Transformer-2-beta) (HTRA2- beta) (Transformer 2 protein homolog).

TRA2B_MOUSE
θ value	θ > 10 (rank : 98)	NC score	0.053145 (rank : 72)
Query Neighborhood Hits	60	Target Neighborhood Hits	207	Shared Neighborhood Hits	34
SwissProt Accessions	P62996, O15449, Q15815, Q64283	Gene names	Sfrs10, Silg41, Tra2b
Domain Architecture	No domain graphic available
Description	Arginine/serine-rich-splicing factor 10 (Transformer-2-beta) (HTRA2- beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41).

Hits sorted by NC score

ROD1_HUMAN
NC score	0.999962 (rank : 1)	θ value	0 (rank : 5)
Query Neighborhood Hits	60	Target Neighborhood Hits	60	Shared Neighborhood Hits	60
SwissProt Accessions	O95758, Q86YB3, Q86YH9	Gene names	ROD1
Domain Architecture	No domain graphic available
Description	Regulator of differentiation 1 (Rod1).

ROD1_MOUSE
NC score	0.998290 (rank : 2)	θ value	0 (rank : 6)
Query Neighborhood Hits	60	Target Neighborhood Hits	59	Shared Neighborhood Hits	53
SwissProt Accessions	Q8BHD7, Q923C3	Gene names	Rod1
Domain Architecture	No domain graphic available
Description	Regulator of differentiation 1 (Rod1).

PTBP1_MOUSE
NC score	0.988258 (rank : 3)	θ value	0 (rank : 2)
Query Neighborhood Hits	60	Target Neighborhood Hits	63	Shared Neighborhood Hits	39
SwissProt Accessions	P17225	Gene names	Ptbp1, Ptb
Domain Architecture
Description	Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I).

PTBP2_HUMAN
NC score	0.982471 (rank : 4)	θ value	0 (rank : 3)
Query Neighborhood Hits	60	Target Neighborhood Hits	89	Shared Neighborhood Hits	46
SwissProt Accessions	Q9UKA9, Q8N0Z1, Q8N160, Q8NFB0, Q8NFB1, Q969N9, Q96Q76	Gene names	PTBP2, NPTB, PTB, PTBLP
Domain Architecture	No domain graphic available
Description	Polypyrimidine tract-binding protein 2 (Neurally-enriched homolog of PTB) (Neural polypyrimidine tract-binding protein) (PTB-like protein).

PTBP2_MOUSE
NC score	0.982377 (rank : 5)	θ value	0 (rank : 4)
Query Neighborhood Hits	60	Target Neighborhood Hits	89	Shared Neighborhood Hits	46
SwissProt Accessions	Q91Z31, Q7TNW7, Q9CUW2, Q9QYC2, Q9R0V9	Gene names	Ptbp2, Brptb, Nptb
Domain Architecture	No domain graphic available
Description	Polypyrimidine tract-binding protein 2 (Brain-enriched polypyrimidine tract-binding protein) (Brain-enriched PTB) (RRM-type RNA-binding protein brPTB) (Neural polypyrimidine tract-binding protein).

PTBP1_HUMAN
NC score	0.975550 (rank : 6)	θ value	0 (rank : 1)
Query Neighborhood Hits	60	Target Neighborhood Hits	103	Shared Neighborhood Hits	46
SwissProt Accessions	P26599	Gene names	PTBP1, PTB
Domain Architecture
Description	Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) (57 kDa RNA-binding protein PPTB-1).

HNRLL_HUMAN
NC score	0.802813 (rank : 7)	θ value	2.96089e-35 (rank : 8)
Query Neighborhood Hits	60	Target Neighborhood Hits	25	Shared Neighborhood Hits	14
SwissProt Accessions	Q8WVV9, Q659B9, Q8IVH5, Q8IVH6, Q96HR5	Gene names	HNRPLL, SRRF
Domain Architecture	No domain graphic available
Description	Heterogeneous nuclear ribonucleoprotein L-like (Stromal RNA-regulating factor) (BLOCK24 protein).

HNRLL_MOUSE
NC score	0.799804 (rank : 8)	θ value	5.96599e-36 (rank : 7)
Query Neighborhood Hits	60	Target Neighborhood Hits	63	Shared Neighborhood Hits	16
SwissProt Accessions	Q921F4, Q8BIP6, Q99J40	Gene names	Hnrpll
Domain Architecture	No domain graphic available
Description	Heterogeneous nuclear ribonucleoprotein L-like.

HNRPL_HUMAN
NC score	0.766507 (rank : 9)	θ value	3.86705e-35 (rank : 9)
Query Neighborhood Hits	60	Target Neighborhood Hits	36	Shared Neighborhood Hits	15
SwissProt Accessions	P14866, Q9H3P3	Gene names	HNRPL
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein L (hnRNP L).

HNRPL_MOUSE
NC score	0.765728 (rank : 10)	θ value	6.59618e-35 (rank : 10)
Query Neighborhood Hits	60	Target Neighborhood Hits	34	Shared Neighborhood Hits	14
SwissProt Accessions	Q8R081, O54789, Q8K0S7	Gene names	Hnrpl
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein L (hnRNP L).

MATR3_MOUSE
NC score	0.311313 (rank : 11)	θ value	1.09739e-05 (rank : 12)
Query Neighborhood Hits	60	Target Neighborhood Hits	321	Shared Neighborhood Hits	18
SwissProt Accessions	Q8K310	Gene names	Matr3
Domain Architecture	No domain graphic available
Description	Matrin-3.

MATR3_HUMAN
NC score	0.308785 (rank : 12)	θ value	1.09739e-05 (rank : 11)
Query Neighborhood Hits	60	Target Neighborhood Hits	325	Shared Neighborhood Hits	18
SwissProt Accessions	P43243, Q9UHW0, Q9UQ27	Gene names	MATR3, KIAA0723
Domain Architecture
Description	Matrin-3.

RU2B_HUMAN
NC score	0.209438 (rank : 13)	θ value	0.0736092 (rank : 26)
Query Neighborhood Hits	60	Target Neighborhood Hits	94	Shared Neighborhood Hits	23
SwissProt Accessions	P08579, Q9UJD4	Gene names	SNRPB2
Domain Architecture
Description	U2 small nuclear ribonucleoprotein B''.

RU2B_MOUSE
NC score	0.206925 (rank : 14)	θ value	0.0736092 (rank : 27)
Query Neighborhood Hits	60	Target Neighborhood Hits	96	Shared Neighborhood Hits	23
SwissProt Accessions	Q9CQI7, Q9CW35, Q9CZ66	Gene names	Snrpb2
Domain Architecture	No domain graphic available
Description	U2 small nuclear ribonucleoprotein B''.

ZN638_MOUSE
NC score	0.198510 (rank : 15)	θ value	0.0148317 (rank : 17)
Query Neighborhood Hits	60	Target Neighborhood Hits	318	Shared Neighborhood Hits	20
SwissProt Accessions	Q61464, Q6DFV9, Q8C941	Gene names	Znf638, Np220, Zfml
Domain Architecture	No domain graphic available
Description	Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger matrin-like protein).

ZN638_HUMAN
NC score	0.184435 (rank : 16)	θ value	0.00509761 (rank : 15)
Query Neighborhood Hits	60	Target Neighborhood Hits	343	Shared Neighborhood Hits	16
SwissProt Accessions	Q14966, Q53R34, Q5XJ05, Q68DP3, Q6P2H2, Q7Z3T7, Q8NF92, Q8TCA1, Q9H2G1, Q9NP37	Gene names	ZNF638, NP220, ZFML
Domain Architecture	No domain graphic available
Description	Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger matrin-like protein) (Cutaneous T-cell lymphoma-associated antigen se33-1) (CTCL tumor antigen se33-1).

ELAV4_MOUSE
NC score	0.155041 (rank : 17)	θ value	9.29e-05 (rank : 13)
Query Neighborhood Hits	60	Target Neighborhood Hits	216	Shared Neighborhood Hits	36
SwissProt Accessions	Q61701, O55010	Gene names	Elavl4, Hud
Domain Architecture
Description	ELAV-like protein 4 (Paraneoplastic encephalomyelitis antigen HuD) (Hu-antigen D).

ELAV4_HUMAN
NC score	0.153747 (rank : 18)	θ value	0.000158464 (rank : 14)
Query Neighborhood Hits	60	Target Neighborhood Hits	217	Shared Neighborhood Hits	36
SwissProt Accessions	P26378, Q96J74	Gene names	ELAVL4, HUD, PNEM
Domain Architecture
Description	ELAV-like protein 4 (Paraneoplastic encephalomyelitis antigen HuD) (Hu-antigen D).

NONO_MOUSE
NC score	0.148755 (rank : 19)	θ value	0.0563607 (rank : 25)
Query Neighborhood Hits	60	Target Neighborhood Hits	444	Shared Neighborhood Hits	36
SwissProt Accessions	Q99K48, Q63887, Q9CYQ4, Q9DBP2	Gene names	Nono
Domain Architecture	No domain graphic available
Description	Non-POU domain-containing octamer-binding protein (NonO protein).

ELAV3_HUMAN
NC score	0.148338 (rank : 20)	θ value	0.0252991 (rank : 18)
Query Neighborhood Hits	60	Target Neighborhood Hits	217	Shared Neighborhood Hits	36
SwissProt Accessions	Q14576, Q16135, Q96CL8, Q96QS9	Gene names	ELAVL3, HUC, PLE21
Domain Architecture
Description	ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21).

RBM7_HUMAN
NC score	0.148315 (rank : 21)	θ value	0.21417 (rank : 29)
Query Neighborhood Hits	60	Target Neighborhood Hits	173	Shared Neighborhood Hits	32
SwissProt Accessions	Q9Y580	Gene names	RBM7
Domain Architecture
Description	RNA-binding protein 7 (RNA-binding motif protein 7).

ZCRB1_HUMAN
NC score	0.148279 (rank : 22)	θ value	0.47712 (rank : 34)
Query Neighborhood Hits	60	Target Neighborhood Hits	230	Shared Neighborhood Hits	42
SwissProt Accessions	Q8TBF4, Q6PJX0	Gene names	ZCRB1
Domain Architecture	No domain graphic available
Description	Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (U11/U12 snRNP 31 kDa protein) (U11/U12-31K).

NONO_HUMAN
NC score	0.147344 (rank : 23)	θ value	0.0563607 (rank : 24)
Query Neighborhood Hits	60	Target Neighborhood Hits	441	Shared Neighborhood Hits	36
SwissProt Accessions	Q15233, O00201, P30807, Q12786, Q9BQC5	Gene names	NONO, NRB54
Domain Architecture
Description	Non-POU domain-containing octamer-binding protein (NonO protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit).

ELAV2_MOUSE
NC score	0.147177 (rank : 24)	θ value	0.0563607 (rank : 23)
Query Neighborhood Hits	60	Target Neighborhood Hits	218	Shared Neighborhood Hits	36
SwissProt Accessions	Q60899	Gene names	Elavl2, Hub
Domain Architecture
Description	ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1).

ELAV2_HUMAN
NC score	0.146839 (rank : 25)	θ value	0.0431538 (rank : 22)
Query Neighborhood Hits	60	Target Neighborhood Hits	218	Shared Neighborhood Hits	36
SwissProt Accessions	Q12926, Q13235, Q59G15, Q8NEM4, Q9H1Q8	Gene names	ELAVL2, HUB
Domain Architecture
Description	ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1).

ELAV3_MOUSE
NC score	0.146292 (rank : 26)	θ value	0.0252991 (rank : 19)
Query Neighborhood Hits	60	Target Neighborhood Hits	213	Shared Neighborhood Hits	35
SwissProt Accessions	Q60900, Q60901	Gene names	Elavl3, Huc
Domain Architecture
Description	ELAV-like protein 3 (Hu-antigen C) (HuC).

RBM7_MOUSE
NC score	0.135437 (rank : 27)	θ value	0.62314 (rank : 35)
Query Neighborhood Hits	60	Target Neighborhood Hits	182	Shared Neighborhood Hits	33
SwissProt Accessions	Q9CQT2, Q3UB91, Q7TQE3	Gene names	Rbm7
Domain Architecture	No domain graphic available
Description	RNA-binding protein 7 (RNA-binding motif protein 7).

ELAV1_HUMAN
NC score	0.131039 (rank : 28)	θ value	0.0431538 (rank : 21)
Query Neighborhood Hits	60	Target Neighborhood Hits	225	Shared Neighborhood Hits	35
SwissProt Accessions	Q15717, Q9BTT1	Gene names	ELAVL1, HUR
Domain Architecture
Description	ELAV-like protein 1 (Hu-antigen R) (HuR).

HTSF1_HUMAN
NC score	0.128998 (rank : 29)	θ value	0.0113563 (rank : 16)
Query Neighborhood Hits	60	Target Neighborhood Hits	408	Shared Neighborhood Hits	34
SwissProt Accessions	O43719, Q59G06, Q99730	Gene names	HTATSF1
Domain Architecture	No domain graphic available
Description	HIV Tat-specific factor 1 (Tat-SF1).

ZCRB1_MOUSE
NC score	0.121036 (rank : 30)	θ value	1.06291 (rank : 37)
Query Neighborhood Hits	60	Target Neighborhood Hits	218	Shared Neighborhood Hits	41
SwissProt Accessions	Q9CZ96, Q3TDL3	Gene names	Zcrb1
Domain Architecture	No domain graphic available
Description	Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (MADP-1).

SNRPA_MOUSE
NC score	0.117517 (rank : 31)	θ value	0.279714 (rank : 31)
Query Neighborhood Hits	60	Target Neighborhood Hits	129	Shared Neighborhood Hits	25
SwissProt Accessions	Q62189, Q52LA2	Gene names	Snrpa, Rnu1a-1
Domain Architecture
Description	U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A protein) (U1-A).

HTSF1_MOUSE
NC score	0.110145 (rank : 32)	θ value	0.21417 (rank : 28)
Query Neighborhood Hits	60	Target Neighborhood Hits	425	Shared Neighborhood Hits	31
SwissProt Accessions	Q8BGC0, Q1WWK0, Q9CT41, Q9DAU3	Gene names	Htatsf1
Domain Architecture	No domain graphic available
Description	HIV Tat-specific factor 1 homolog.

PM14_HUMAN
NC score	0.109602 (rank : 33)	θ value	1.38821 (rank : 39)
Query Neighborhood Hits	60	Target Neighborhood Hits	134	Shared Neighborhood Hits	33
SwissProt Accessions	Q9Y3B4	Gene names	SF3B14
Domain Architecture
Description	Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit).

PM14_MOUSE
NC score	0.109602 (rank : 34)	θ value	1.38821 (rank : 40)
Query Neighborhood Hits	60	Target Neighborhood Hits	134	Shared Neighborhood Hits	33
SwissProt Accessions	P59708, Q3U9T9	Gene names	Sf3b14
Domain Architecture
Description	Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit).

RBM19_MOUSE
NC score	0.108144 (rank : 35)	θ value	0.365318 (rank : 32)
Query Neighborhood Hits	60	Target Neighborhood Hits	296	Shared Neighborhood Hits	40
SwissProt Accessions	Q8R3C6, Q8BHR0, Q9CW63	Gene names	Rbm19
Domain Architecture	No domain graphic available
Description	Probable RNA-binding protein 19 (RNA-binding motif protein 19).

ELAV1_MOUSE
NC score	0.107808 (rank : 36)	θ value	1.81305 (rank : 42)
Query Neighborhood Hits	60	Target Neighborhood Hits	219	Shared Neighborhood Hits	32
SwissProt Accessions	P70372, Q60745	Gene names	Elavl1, Elra, Hua
Domain Architecture
Description	ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like generic protein) (MelG).

RBM19_HUMAN
NC score	0.105865 (rank : 37)	θ value	0.0330416 (rank : 20)
Query Neighborhood Hits	60	Target Neighborhood Hits	331	Shared Neighborhood Hits	41
SwissProt Accessions	Q9Y4C8, Q9BPY6, Q9UFN5	Gene names	RBM19, KIAA0682
Domain Architecture
Description	Probable RNA-binding protein 19 (RNA-binding motif protein 19).

SNRPA_HUMAN
NC score	0.096340 (rank : 38)	θ value	θ > 10 (rank : 93)
Query Neighborhood Hits	60	Target Neighborhood Hits	128	Shared Neighborhood Hits	25
SwissProt Accessions	P09012	Gene names	SNRPA
Domain Architecture
Description	U1 small nuclear ribonucleoprotein A (U1 snRNP protein A) (U1A protein) (U1-A).

RBM4B_MOUSE
NC score	0.095991 (rank : 39)	θ value	θ > 10 (rank : 81)
Query Neighborhood Hits	60	Target Neighborhood Hits	216	Shared Neighborhood Hits	31
SwissProt Accessions	Q8VE92	Gene names	Rbm4b, Rbm30
Domain Architecture	No domain graphic available
Description	RNA-binding protein 4B (RNA-binding motif protein 4B) (RNA-binding protein 30) (RNA-binding motif protein 30).

RBM4B_HUMAN
NC score	0.095962 (rank : 40)	θ value	θ > 10 (rank : 80)
Query Neighborhood Hits	60	Target Neighborhood Hits	219	Shared Neighborhood Hits	32
SwissProt Accessions	Q9BQ04	Gene names	RBM4B, RBM30
Domain Architecture	No domain graphic available
Description	RNA-binding protein 4B (RNA-binding motif protein 4B) (RNA-binding protein 30) (RNA-binding motif protein 30).

RBM4_MOUSE
NC score	0.095803 (rank : 41)	θ value	θ > 10 (rank : 83)
Query Neighborhood Hits	60	Target Neighborhood Hits	223	Shared Neighborhood Hits	31
SwissProt Accessions	Q8C7Q4, O08752, Q8BN66	Gene names	Rbm4, Rbm4a
Domain Architecture	No domain graphic available
Description	RNA-binding protein 4 (RNA-binding motif protein 4) (RNA-binding motif protein 4a) (Lark homolog) (mLark).

RBM4_HUMAN
NC score	0.095685 (rank : 42)	θ value	θ > 10 (rank : 82)
Query Neighborhood Hits	60	Target Neighborhood Hits	219	Shared Neighborhood Hits	30
SwissProt Accessions	Q9BWF3, O02916, Q6P1P2, Q8WU85	Gene names	RBM4, RBM4A
Domain Architecture	No domain graphic available
Description	RNA-binding protein 4 (RNA-binding motif protein 4) (RNA-binding motif protein 4a) (Lark homolog) (hLark).

SFRS2_HUMAN
NC score	0.095314 (rank : 43)	θ value	4.03905 (rank : 47)
Query Neighborhood Hits	60	Target Neighborhood Hits	222	Shared Neighborhood Hits	35
SwissProt Accessions	Q01130	Gene names	SFRS2
Domain Architecture
Description	Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) (Protein PR264).

SFRS2_MOUSE
NC score	0.095314 (rank : 44)	θ value	4.03905 (rank : 48)
Query Neighborhood Hits	60	Target Neighborhood Hits	222	Shared Neighborhood Hits	35
SwissProt Accessions	Q62093, Q542L3, Q60701	Gene names	Sfrs2, Pr264, Sfrs10
Domain Architecture
Description	Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) (Protein PR264) (Putative myelin regulatory factor 1) (MRF-1).

DRBP1_HUMAN
NC score	0.094843 (rank : 45)	θ value	θ > 10 (rank : 62)
Query Neighborhood Hits	60	Target Neighborhood Hits	166	Shared Neighborhood Hits	27
SwissProt Accessions	Q8IUH3, Q6NYL0, Q8NFC9	Gene names	DRBP1, DRB1
Domain Architecture	No domain graphic available
Description	Developmentally-regulated RNA-binding protein 1 (RB-1).

DRBP1_MOUSE
NC score	0.085569 (rank : 46)	θ value	θ > 10 (rank : 63)
Query Neighborhood Hits	60	Target Neighborhood Hits	169	Shared Neighborhood Hits	27
SwissProt Accessions	Q8BHN5, Q8C1Z5	Gene names	Drbp1, Drb1
Domain Architecture	No domain graphic available
Description	Developmentally-regulated RNA-binding protein 1 (RB-1).

SAFB1_HUMAN
NC score	0.082355 (rank : 47)	θ value	0.365318 (rank : 33)
Query Neighborhood Hits	60	Target Neighborhood Hits	493	Shared Neighborhood Hits	31
SwissProt Accessions	Q15424, O60406, Q59HH8	Gene names	SAFB, HAP, HET, SAFB1
Domain Architecture
Description	Scaffold attachment factor B (Scaffold attachment factor B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE- TATA-binding protein).

RBMX2_MOUSE
NC score	0.078134 (rank : 48)	θ value	θ > 10 (rank : 87)
Query Neighborhood Hits	60	Target Neighborhood Hits	287	Shared Neighborhood Hits	36
SwissProt Accessions	Q8R0F5, Q3TI42	Gene names	Rbmx2
Domain Architecture
Description	RNA-binding motif protein, X-linked 2.

RBMS1_MOUSE
NC score	0.074676 (rank : 49)	θ value	3.0926 (rank : 45)
Query Neighborhood Hits	60	Target Neighborhood Hits	192	Shared Neighborhood Hits	25
SwissProt Accessions	Q91W59, Q6PEU6, Q6PHC2, Q9WTK4	Gene names	Rbms1, Mssp, Mssp1
Domain Architecture	No domain graphic available
Description	RNA-binding motif, single-stranded-interacting protein 1 (Single- stranded DNA-binding protein MSSP-1).

RBMX2_HUMAN
NC score	0.073454 (rank : 50)	θ value	θ > 10 (rank : 86)
Query Neighborhood Hits	60	Target Neighborhood Hits	351	Shared Neighborhood Hits	36
SwissProt Accessions	Q9Y388, Q5JY82, Q9Y3I8	Gene names	RBMX2
Domain Architecture
Description	RNA-binding motif protein, X-linked 2.

RBMS1_HUMAN
NC score	0.069495 (rank : 51)	θ value	5.27518 (rank : 52)
Query Neighborhood Hits	60	Target Neighborhood Hits	190	Shared Neighborhood Hits	24
SwissProt Accessions	P29558, Q15433, Q8WV20	Gene names	RBMS1, MSSP, MSSP1, SCR2
Domain Architecture
Description	RNA-binding motif, single-stranded-interacting protein 1 (Single- stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA- binding motif 2).

MK67I_HUMAN
NC score	0.066313 (rank : 52)	θ value	θ > 10 (rank : 68)
Query Neighborhood Hits	60	Target Neighborhood Hits	167	Shared Neighborhood Hits	27
SwissProt Accessions	Q9BYG3, Q8TB66, Q96ED4	Gene names	MKI67IP, NIFK, NOPP34
Domain Architecture	No domain graphic available
Description	MKI67 FHA domain-interacting nucleolar phosphoprotein (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34).

RBM23_HUMAN
NC score	0.065392 (rank : 53)	θ value	θ > 10 (rank : 78)
Query Neighborhood Hits	60	Target Neighborhood Hits	235	Shared Neighborhood Hits	38
SwissProt Accessions	Q86U06, Q8ND16, Q8TB88, Q8WY40, Q9BUJ1, Q9NVV7	Gene names	RBM23, RNPC4
Domain Architecture
Description	Probable RNA-binding protein 23 (RNA-binding motif protein 23) (RNA- binding region-containing protein 4) (Splicing factor SF2).

PABP5_HUMAN
NC score	0.063529 (rank : 54)	θ value	θ > 10 (rank : 74)
Query Neighborhood Hits	60	Target Neighborhood Hits	212	Shared Neighborhood Hits	34
SwissProt Accessions	Q96DU9, Q6P529, Q9UFE5	Gene names	PABPC5, PABP5
Domain Architecture
Description	Polyadenylate-binding protein 5 (Poly(A)-binding protein 5) (PABP 5).

SFPQ_MOUSE
NC score	0.063231 (rank : 55)	θ value	θ > 10 (rank : 91)
Query Neighborhood Hits	60	Target Neighborhood Hits	958	Shared Neighborhood Hits	35
SwissProt Accessions	Q8VIJ6, Q9ERW2	Gene names	Sfpq
Domain Architecture	No domain graphic available
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit).

SFPQ_HUMAN
NC score	0.063110 (rank : 56)	θ value	θ > 10 (rank : 90)
Query Neighborhood Hits	60	Target Neighborhood Hits	986	Shared Neighborhood Hits	35
SwissProt Accessions	P23246, P30808	Gene names	SFPQ, PSF
Domain Architecture
Description	Splicing factor, proline- and glutamine-rich (Polypyrimidine tract- binding protein-associated-splicing factor) (PTB-associated-splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100 kDa DNA-pairing protein) (hPOMp100).

SF3B4_HUMAN
NC score	0.058077 (rank : 57)	θ value	θ > 10 (rank : 89)
Query Neighborhood Hits	60	Target Neighborhood Hits	445	Shared Neighborhood Hits	34
SwissProt Accessions	Q15427	Gene names	SF3B4, SAP49
Domain Architecture
Description	Splicing factor 3B subunit 4 (Spliceosome-associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit).

RBMS2_HUMAN
NC score	0.057948 (rank : 58)	θ value	θ > 10 (rank : 84)
Query Neighborhood Hits	60	Target Neighborhood Hits	173	Shared Neighborhood Hits	21
SwissProt Accessions	Q15434	Gene names	RBMS2, SCR3
Domain Architecture	No domain graphic available
Description	RNA-binding motif, single-stranded-interacting protein 2 (Suppressor of CDC2 with RNA-binding motif 3).

RBMS2_MOUSE
NC score	0.057434 (rank : 59)	θ value	θ > 10 (rank : 85)
Query Neighborhood Hits	60	Target Neighborhood Hits	168	Shared Neighborhood Hits	21
SwissProt Accessions	Q8VC70	Gene names	Rbms2
Domain Architecture	No domain graphic available
Description	RNA-binding motif, single-stranded-interacting protein 2.

ACF_MOUSE
NC score	0.057337 (rank : 60)	θ value	θ > 10 (rank : 61)
Query Neighborhood Hits	60	Target Neighborhood Hits	205	Shared Neighborhood Hits	36
SwissProt Accessions	Q5YD48, Q5FW55, Q5YD47	Gene names	Acf, Asp
Domain Architecture	No domain graphic available
Description	APOBEC1 complementation factor (APOBEC1-stimulating protein).

RBM14_MOUSE
NC score	0.057335 (rank : 61)	θ value	θ > 10 (rank : 77)
Query Neighborhood Hits	60	Target Neighborhood Hits	217	Shared Neighborhood Hits	29
SwissProt Accessions	Q8C2Q3, Q3TJB6, Q91Z21, Q9DBI6	Gene names	Rbm14
Domain Architecture	No domain graphic available
Description	RNA-binding protein 14 (RNA-binding motif protein 14).

PABP1_MOUSE
NC score	0.057071 (rank : 62)	θ value	θ > 10 (rank : 71)
Query Neighborhood Hits	60	Target Neighborhood Hits	278	Shared Neighborhood Hits	37
SwissProt Accessions	P29341	Gene names	Pabpc1, Pabp1
Domain Architecture
Description	Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1).

RBY1A_HUMAN
NC score	0.056771 (rank : 63)	θ value	θ > 10 (rank : 88)
Query Neighborhood Hits	60	Target Neighborhood Hits	245	Shared Neighborhood Hits	34
SwissProt Accessions	Q15414, Q15377, Q8NHR0	Gene names	RBMY1A1, RBM1, YRRM1
Domain Architecture
Description	RNA-binding motif protein, Y chromosome, family 1 member A1 (RNA- binding motif protein 1).

PABP1_HUMAN
NC score	0.056387 (rank : 64)	θ value	θ > 10 (rank : 70)
Query Neighborhood Hits	60	Target Neighborhood Hits	269	Shared Neighborhood Hits	37
SwissProt Accessions	P11940, Q15097, Q93004	Gene names	PABPC1, PAB1, PABP1, PABPC2
Domain Architecture
Description	Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1).

NUCL_MOUSE
NC score	0.055732 (rank : 65)	θ value	θ > 10 (rank : 69)
Query Neighborhood Hits	60	Target Neighborhood Hits	425	Shared Neighborhood Hits	36
SwissProt Accessions	P09405, Q548M9, Q61991, Q99K50	Gene names	Ncl, Nuc
Domain Architecture
Description	Nucleolin (Protein C23).

SRR35_HUMAN
NC score	0.055622 (rank : 66)	θ value	θ > 10 (rank : 94)
Query Neighborhood Hits	60	Target Neighborhood Hits	215	Shared Neighborhood Hits	36
SwissProt Accessions	Q8WXF0, Q8WW25	Gene names	SRRP35
Domain Architecture
Description	35 kDa SR repressor protein (SRrp35).

RBM11_HUMAN
NC score	0.055326 (rank : 67)	θ value	θ > 10 (rank : 75)
Query Neighborhood Hits	60	Target Neighborhood Hits	149	Shared Neighborhood Hits	29
SwissProt Accessions	P57052	Gene names	RBM11
Domain Architecture
Description	Putative RNA-binding protein 11 (RNA-binding motif protein 11).

TIA1_HUMAN
NC score	0.055154 (rank : 68)	θ value	θ > 10 (rank : 95)
Query Neighborhood Hits	60	Target Neighborhood Hits	236	Shared Neighborhood Hits	36
SwissProt Accessions	P31483	Gene names	TIA1
Domain Architecture	No domain graphic available
Description	Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1) (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)].

HNRPQ_HUMAN
NC score	0.055002 (rank : 69)	θ value	θ > 10 (rank : 66)
Query Neighborhood Hits	60	Target Neighborhood Hits	236	Shared Neighborhood Hits	35
SwissProt Accessions	O60506, Q53H05, Q5TCG2, Q8IW78, Q8N599, Q96LC1, Q96LC2, Q9Y583	Gene names	SYNCRIP, HNRPQ, NSAP1
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine- and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1).

RBM28_MOUSE
NC score	0.053471 (rank : 70)	θ value	θ > 10 (rank : 79)
Query Neighborhood Hits	60	Target Neighborhood Hits	368	Shared Neighborhood Hits	36
SwissProt Accessions	Q8CGC6, Q8BG25, Q8VEJ8, Q9CS22, Q9CSE6	Gene names	Rbm28
Domain Architecture	No domain graphic available
Description	RNA-binding protein 28 (RNA-binding motif protein 28).

TRA2B_HUMAN
NC score	0.053145 (rank : 71)	θ value	θ > 10 (rank : 97)
Query Neighborhood Hits	60	Target Neighborhood Hits	207	Shared Neighborhood Hits	34
SwissProt Accessions	P62995, O15449, Q15815, Q64283	Gene names	SFRS10, TRA2B
Domain Architecture	No domain graphic available
Description	Arginine/serine-rich-splicing factor 10 (Transformer-2-beta) (HTRA2- beta) (Transformer 2 protein homolog).

TRA2B_MOUSE
NC score	0.053145 (rank : 72)	θ value	θ > 10 (rank : 98)
Query Neighborhood Hits	60	Target Neighborhood Hits	207	Shared Neighborhood Hits	34
SwissProt Accessions	P62996, O15449, Q15815, Q64283	Gene names	Sfrs10, Silg41, Tra2b
Domain Architecture	No domain graphic available
Description	Arginine/serine-rich-splicing factor 10 (Transformer-2-beta) (HTRA2- beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41).

PABP4_HUMAN
NC score	0.053080 (rank : 73)	θ value	θ > 10 (rank : 73)
Query Neighborhood Hits	60	Target Neighborhood Hits	268	Shared Neighborhood Hits	37
SwissProt Accessions	Q13310, Q6P0N3	Gene names	PABPC4, APP1, PABP4
Domain Architecture
Description	Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1).

PABP3_HUMAN
NC score	0.052974 (rank : 74)	θ value	θ > 10 (rank : 72)
Query Neighborhood Hits	60	Target Neighborhood Hits	259	Shared Neighborhood Hits	38
SwissProt Accessions	Q9H361, Q8NHV0, Q9H086	Gene names	PABPC3, PABP3, PABPL3
Domain Architecture
Description	Polyadenylate-binding protein 3 (Poly(A)-binding protein 3) (PABP 3) (Testis-specific poly(A)-binding protein).

SFRS7_HUMAN
NC score	0.052702 (rank : 75)	θ value	θ > 10 (rank : 92)
Query Neighborhood Hits	60	Target Neighborhood Hits	191	Shared Neighborhood Hits	29
SwissProt Accessions	Q16629	Gene names	SFRS7
Domain Architecture
Description	Splicing factor, arginine/serine-rich 7 (Splicing factor 9G8).

TIA1_MOUSE
NC score	0.052442 (rank : 76)	θ value	θ > 10 (rank : 96)
Query Neighborhood Hits	60	Target Neighborhood Hits	241	Shared Neighborhood Hits	36
SwissProt Accessions	P52912	Gene names	Tia1, Tia
Domain Architecture
Description	Nucleolysin TIA-1 (RNA-binding protein TIA-1).

RBM14_HUMAN
NC score	0.052114 (rank : 77)	θ value	θ > 10 (rank : 76)
Query Neighborhood Hits	60	Target Neighborhood Hits	213	Shared Neighborhood Hits	28
SwissProt Accessions	Q96PK6, O75932, Q53GV1, Q68DQ9, Q96PK5	Gene names	RBM14, SIP
Domain Architecture	No domain graphic available
Description	RNA-binding protein 14 (RNA-binding motif protein 14) (RRM-containing coactivator activator/modulator) (Synaptotagmin-interacting protein) (SYT-interacting protein).

SFRS3_HUMAN
NC score	0.052107 (rank : 78)	θ value	8.99809 (rank : 59)
Query Neighborhood Hits	60	Target Neighborhood Hits	151	Shared Neighborhood Hits	32
SwissProt Accessions	P84103, O08831, P23152	Gene names	SFRS3, SRP20
Domain Architecture	No domain graphic available
Description	Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing factor SRP20).

SFRS3_MOUSE
NC score	0.052107 (rank : 79)	θ value	8.99809 (rank : 60)
Query Neighborhood Hits	60	Target Neighborhood Hits	151	Shared Neighborhood Hits	32
SwissProt Accessions	P84104, O08831, P23152, Q564E9	Gene names	Sfrs3, Srp20, X16
Domain Architecture	No domain graphic available
Description	Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing factor SRP20) (X16 protein).

HNRPQ_MOUSE
NC score	0.051879 (rank : 80)	θ value	θ > 10 (rank : 67)
Query Neighborhood Hits	60	Target Neighborhood Hits	236	Shared Neighborhood Hits	34
SwissProt Accessions	Q7TMK9, O88991, Q80YV6, Q8BGP1, Q8C5K6, Q8CGC2, Q91ZR0, Q99KU9, Q9QYF4	Gene names	Syncrip, Hnrpq, Nsap1, Nsap1l
Domain Architecture
Description	Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine- and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68).

FUSIP_HUMAN
NC score	0.050246 (rank : 81)	θ value	θ > 10 (rank : 64)
Query Neighborhood Hits	60	Target Neighborhood Hits	230	Shared Neighborhood Hits	34
SwissProt Accessions	O75494, O60572, Q96G09, Q96P17	Gene names	FUSIP1, TASR
Domain Architecture
Description	FUS-interacting serine-arginine-rich protein 1 (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor protein) (SRrp40) (Splicing factor SRp38).

FUSIP_MOUSE
NC score	0.050246 (rank : 82)	θ value	θ > 10 (rank : 65)
Query Neighborhood Hits	60	Target Neighborhood Hits	230	Shared Neighborhood Hits	34
SwissProt Accessions	Q9R0U0, O70307, O88468, Q3TGW7, Q8CFZ1, Q9R0T9	Gene names	Fusip1, Nssr
Domain Architecture
Description	FUS-interacting serine-arginine-rich protein 1 (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR protein) (Neural-salient serine/arginine-rich protein).

IF39_MOUSE
NC score	0.046381 (rank : 83)	θ value	4.03905 (rank : 46)
Query Neighborhood Hits	60	Target Neighborhood Hits	206	Shared Neighborhood Hits	18
SwissProt Accessions	Q8JZQ9, Q922K2	Gene names	Eif3s9
Domain Architecture	No domain graphic available
Description	Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116).

MINT_HUMAN
NC score	0.041563 (rank : 84)	θ value	6.88961 (rank : 55)
Query Neighborhood Hits	60	Target Neighborhood Hits	1291	Shared Neighborhood Hits	44
SwissProt Accessions	Q96T58, Q9H9A8, Q9NWH5, Q9UQ01, Q9Y556	Gene names	SPEN, KIAA0929, MINT, SHARP
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

MINT_MOUSE
NC score	0.038692 (rank : 85)	θ value	8.99809 (rank : 58)
Query Neighborhood Hits	60	Target Neighborhood Hits	1514	Shared Neighborhood Hits	45
SwissProt Accessions	Q62504, Q80TN9, Q99PS4, Q9QZW2	Gene names	Spen, Kiaa0929, Mint, Sharp
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

IF39_HUMAN
NC score	0.033275 (rank : 86)	θ value	6.88961 (rank : 54)
Query Neighborhood Hits	60	Target Neighborhood Hits	187	Shared Neighborhood Hits	12
SwissProt Accessions	P55884, Q9UMF9	Gene names	EIF3S9
Domain Architecture
Description	Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1).

P3C2G_MOUSE
NC score	0.021423 (rank : 87)	θ value	3.0926 (rank : 44)
Query Neighborhood Hits	60	Target Neighborhood Hits	113	Shared Neighborhood Hits	6
SwissProt Accessions	O70167, O70168	Gene names	Pik3c2g
Domain Architecture
Description	Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing gamma polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2 gamma) (PI3K-C2gamma).

ACINU_MOUSE
NC score	0.018424 (rank : 88)	θ value	5.27518 (rank : 50)
Query Neighborhood Hits	60	Target Neighborhood Hits	712	Shared Neighborhood Hits	8
SwissProt Accessions	Q9JIX8, Q9CSN7, Q9CSR9, Q9CSX7, Q9R046, Q9R047	Gene names	Acin1, Acinus
Domain Architecture
Description	Apoptotic chromatin condensation inducer in the nucleus (Acinus).

ACINU_HUMAN
NC score	0.018256 (rank : 89)	θ value	5.27518 (rank : 49)
Query Neighborhood Hits	60	Target Neighborhood Hits	828	Shared Neighborhood Hits	9
SwissProt Accessions	Q9UKV3, O75158, Q9UG91, Q9UKV1, Q9UKV2	Gene names	ACIN1, ACINUS, KIAA0670
Domain Architecture
Description	Apoptotic chromatin condensation inducer in the nucleus (Acinus).

NKX26_MOUSE
NC score	0.017701 (rank : 90)	θ value	0.279714 (rank : 30)
Query Neighborhood Hits	60	Target Neighborhood Hits	343	Shared Neighborhood Hits	3
SwissProt Accessions	P43688	Gene names	Nkx2-6, Nkx-2.6, Nkx2f
Domain Architecture
Description	Homeobox protein Nkx-2.6 (Homeobox protein NK-2 homolog F).

COJA1_HUMAN
NC score	0.014211 (rank : 91)	θ value	1.81305 (rank : 41)
Query Neighborhood Hits	60	Target Neighborhood Hits	323	Shared Neighborhood Hits	6
SwissProt Accessions	Q14993, Q00559, Q05850, Q12885, Q13676, Q5JUF0, Q5T424, Q9H572, Q9NPZ2, Q9NQP2	Gene names	COL19A1
Domain Architecture
Description	Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y) chain).

SYNG_HUMAN
NC score	0.012996 (rank : 92)	θ value	6.88961 (rank : 56)
Query Neighborhood Hits	60	Target Neighborhood Hits	160	Shared Neighborhood Hits	4
SwissProt Accessions	Q9UMZ2, Q6ZT17	Gene names	AP1GBP1, SYNG
Domain Architecture	No domain graphic available
Description	AP1 subunit gamma-binding protein 1 (Gamma-synergin).

CO4A2_MOUSE
NC score	0.011751 (rank : 93)	θ value	1.06291 (rank : 36)
Query Neighborhood Hits	60	Target Neighborhood Hits	492	Shared Neighborhood Hits	8
SwissProt Accessions	P08122, Q61375	Gene names	Col4a2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

MUC5B_HUMAN
NC score	0.011191 (rank : 94)	θ value	1.38821 (rank : 38)
Query Neighborhood Hits	60	Target Neighborhood Hits	1020	Shared Neighborhood Hits	7
SwissProt Accessions	Q9HC84, O00447, O00573, O14985, O15494, O95291, O95451, Q14881, Q99552, Q9UE28	Gene names	MUC5B, MUC5
Domain Architecture
Description	Mucin-5B precursor (Mucin-5 subtype B, tracheobronchial) (High molecular weight salivary mucin MG1) (Sublingual gland mucin).

CO4A2_HUMAN
NC score	0.009733 (rank : 95)	θ value	6.88961 (rank : 53)
Query Neighborhood Hits	60	Target Neighborhood Hits	454	Shared Neighborhood Hits	7
SwissProt Accessions	P08572	Gene names	COL4A2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

CO8A2_MOUSE
NC score	0.009288 (rank : 96)	θ value	5.27518 (rank : 51)
Query Neighborhood Hits	60	Target Neighborhood Hits	273	Shared Neighborhood Hits	5
SwissProt Accessions	P25318, Q68ED0, Q6KAQ4, Q6P1C4	Gene names	Col8a2
Domain Architecture	No domain graphic available
Description	Collagen alpha-2(VIII) chain precursor (Endothelial collagen).

ATX1_MOUSE
NC score	0.006982 (rank : 97)	θ value	8.99809 (rank : 57)
Query Neighborhood Hits	60	Target Neighborhood Hits	264	Shared Neighborhood Hits	5
SwissProt Accessions	P54254	Gene names	Atxn1, Sca1
Domain Architecture
Description	Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog).

RXRA_HUMAN
NC score	0.003870 (rank : 98)	θ value	2.36792 (rank : 43)
Query Neighborhood Hits	60	Target Neighborhood Hits	223	Shared Neighborhood Hits	5
SwissProt Accessions	P19793, Q2V504	Gene names	RXRA, NR2B1
Domain Architecture
Description	Retinoic acid receptor RXR-alpha (Retinoid X receptor alpha).