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Network neighborhood for query Sequence : CC053_HUMAN

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CC053_HUMAN
SwissProt Accessions	Q8N290	Gene names	C3orf53
Domain Architecture	No domain graphic available
Description	Putative uncharacterized protein C3orf53.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

CC053_HUMAN
θ value	1.54472e-92 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q8N290	Gene names	C3orf53
Domain Architecture	No domain graphic available
Description	Putative uncharacterized protein C3orf53.

CO3A1_HUMAN
θ value	0.00869519 (rank : 2)	NC score	0.098505 (rank : 2)
Query Neighborhood Hits	16	Target Neighborhood Hits	452	Shared Neighborhood Hits	9
SwissProt Accessions	P02461, Q15112, Q16403, Q6LDB3, Q6LDJ2, Q6LDJ3, Q7KZ56	Gene names	COL3A1
Domain Architecture
Description	Collagen alpha-1(III) chain precursor.

CO3A1_MOUSE
θ value	0.0330416 (rank : 3)	NC score	0.093775 (rank : 3)
Query Neighborhood Hits	16	Target Neighborhood Hits	466	Shared Neighborhood Hits	9
SwissProt Accessions	P08121, Q61429, Q9CRN7	Gene names	Col3a1
Domain Architecture
Description	Collagen alpha-1(III) chain precursor.

CO1A2_MOUSE
θ value	1.81305 (rank : 4)	NC score	0.078432 (rank : 4)
Query Neighborhood Hits	16	Target Neighborhood Hits	388	Shared Neighborhood Hits	11
SwissProt Accessions	Q01149, Q8CGA5	Gene names	Col1a2, Cola2
Domain Architecture
Description	Collagen alpha-2(I) chain precursor.

COAA1_MOUSE
θ value	1.81305 (rank : 5)	NC score	0.059277 (rank : 11)
Query Neighborhood Hits	16	Target Neighborhood Hits	286	Shared Neighborhood Hits	9
SwissProt Accessions	Q05306	Gene names	Col10a1
Domain Architecture
Description	Collagen alpha-1(X) chain precursor.

RABX5_HUMAN
θ value	4.03905 (rank : 6)	NC score	0.039133 (rank : 21)
Query Neighborhood Hits	16	Target Neighborhood Hits	68	Shared Neighborhood Hits	2
SwissProt Accessions	Q9UJ41	Gene names	RABGEF1, RABEX5
Domain Architecture
Description	Rab5 GDP/GTP exchange factor (Rabex-5) (Rabaptin-5-associated exchange factor for Rab5).

CO4A5_HUMAN
θ value	5.27518 (rank : 7)	NC score	0.040266 (rank : 20)
Query Neighborhood Hits	16	Target Neighborhood Hits	383	Shared Neighborhood Hits	10
SwissProt Accessions	P29400, Q16006, Q16126, Q6LD84	Gene names	COL4A5
Domain Architecture
Description	Collagen alpha-5(IV) chain precursor.

CO5A2_HUMAN
θ value	5.27518 (rank : 8)	NC score	0.064441 (rank : 9)
Query Neighborhood Hits	16	Target Neighborhood Hits	760	Shared Neighborhood Hits	11
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

ZN687_HUMAN
θ value	5.27518 (rank : 9)	NC score	0.015448 (rank : 26)
Query Neighborhood Hits	16	Target Neighborhood Hits	1244	Shared Neighborhood Hits	12
SwissProt Accessions	Q8N1G0, Q68DQ8, Q9H937, Q9P2A7	Gene names	ZNF687, KIAA1441
Domain Architecture	No domain graphic available
Description	Zinc finger protein 687.

COAA1_HUMAN
θ value	6.88961 (rank : 10)	NC score	0.042971 (rank : 19)
Query Neighborhood Hits	16	Target Neighborhood Hits	316	Shared Neighborhood Hits	10
SwissProt Accessions	Q03692	Gene names	COL10A1
Domain Architecture
Description	Collagen alpha-1(X) chain precursor.

NOXO1_HUMAN
θ value	6.88961 (rank : 11)	NC score	0.029694 (rank : 24)
Query Neighborhood Hits	16	Target Neighborhood Hits	100	Shared Neighborhood Hits	2
SwissProt Accessions	Q8NFA2, Q86YM1, Q8NFA3, Q96B73	Gene names	NOXO1, P41NOX
Domain Architecture	No domain graphic available
Description	NADPH oxidase organizer 1 (Nox organizer 1) (Nox-organizing protein 1) (NADPH oxidase regulatory protein).

SMRC2_HUMAN
θ value	6.88961 (rank : 12)	NC score	0.030984 (rank : 22)
Query Neighborhood Hits	16	Target Neighborhood Hits	499	Shared Neighborhood Hits	5
SwissProt Accessions	Q8TAQ2, Q92923, Q96E12, Q96GY4	Gene names	SMARCC2, BAF170
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170).

KLF11_MOUSE
θ value	8.99809 (rank : 13)	NC score	0.004319 (rank : 28)
Query Neighborhood Hits	16	Target Neighborhood Hits	714	Shared Neighborhood Hits	4
SwissProt Accessions	Q9EPF4	Gene names	Klf11, Tieg2
Domain Architecture	No domain graphic available
Description	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2).

PRD13_HUMAN
θ value	8.99809 (rank : 14)	NC score	0.006027 (rank : 27)
Query Neighborhood Hits	16	Target Neighborhood Hits	716	Shared Neighborhood Hits	4
SwissProt Accessions	Q9H4Q3, Q5TGC1	Gene names	PRDM13, PFM10
Domain Architecture	No domain graphic available
Description	PR domain zinc finger protein 13 (PR domain-containing protein 13).

RECQ5_HUMAN
θ value	8.99809 (rank : 15)	NC score	0.017537 (rank : 25)
Query Neighborhood Hits	16	Target Neighborhood Hits	390	Shared Neighborhood Hits	6
SwissProt Accessions	O94762, Q9P1W7, Q9UNC8	Gene names	RECQL5, RECQ5
Domain Architecture
Description	ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ protein-like 5) (RecQ5).

SMRC2_MOUSE
θ value	8.99809 (rank : 16)	NC score	0.030360 (rank : 23)
Query Neighborhood Hits	16	Target Neighborhood Hits	487	Shared Neighborhood Hits	6
SwissProt Accessions	Q6PDG5, Q6P6P3	Gene names	Smarcc2, Baf170
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170).

CO1A1_HUMAN
θ value	θ > 10 (rank : 17)	NC score	0.065434 (rank : 7)
Query Neighborhood Hits	16	Target Neighborhood Hits	475	Shared Neighborhood Hits	9
SwissProt Accessions	P02452, P78441, Q13896, Q13902, Q13903, Q14037, Q14992, Q15176, Q15201, Q16050, Q7KZ30, Q7KZ34, Q8IVI5, Q9UML6, Q9UMM7	Gene names	COL1A1
Domain Architecture
Description	Collagen alpha-1(I) chain precursor.

CO1A1_MOUSE
θ value	θ > 10 (rank : 18)	NC score	0.065942 (rank : 6)
Query Neighborhood Hits	16	Target Neighborhood Hits	457	Shared Neighborhood Hits	8
SwissProt Accessions	P11087, Q53WT0, Q60635, Q61367, Q61427, Q63919, Q6PCL3, Q810J9	Gene names	Col1a1, Cola1
Domain Architecture
Description	Collagen alpha-1(I) chain precursor.

CO1A2_HUMAN
θ value	θ > 10 (rank : 19)	NC score	0.071249 (rank : 5)
Query Neighborhood Hits	16	Target Neighborhood Hits	329	Shared Neighborhood Hits	9
SwissProt Accessions	P08123, P02464, Q9UEB6, Q9UPH0	Gene names	COL1A2
Domain Architecture
Description	Collagen alpha-2(I) chain precursor.

CO2A1_HUMAN
θ value	θ > 10 (rank : 20)	NC score	0.064003 (rank : 10)
Query Neighborhood Hits	16	Target Neighborhood Hits	486	Shared Neighborhood Hits	10
SwissProt Accessions	P02458, Q12985, Q14009, Q14044, Q14046, Q14056, Q14058, Q16672, Q6LBY1, Q6LBY2, Q6LBY3, Q99227, Q9UE38, Q9UE39, Q9UE40, Q9UE41, Q9UE42, Q9UE43	Gene names	COL2A1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO2A1_MOUSE
θ value	θ > 10 (rank : 21)	NC score	0.065261 (rank : 8)
Query Neighborhood Hits	16	Target Neighborhood Hits	483	Shared Neighborhood Hits	9
SwissProt Accessions	P28481	Gene names	Col2a1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO4A1_HUMAN
θ value	θ > 10 (rank : 22)	NC score	0.050813 (rank : 18)
Query Neighborhood Hits	16	Target Neighborhood Hits	425	Shared Neighborhood Hits	8
SwissProt Accessions	P02462	Gene names	COL4A1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

CO4A1_MOUSE
θ value	θ > 10 (rank : 23)	NC score	0.052863 (rank : 15)
Query Neighborhood Hits	16	Target Neighborhood Hits	450	Shared Neighborhood Hits	9
SwissProt Accessions	P02463	Gene names	Col4a1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

CO4A2_HUMAN
θ value	θ > 10 (rank : 24)	NC score	0.055166 (rank : 12)
Query Neighborhood Hits	16	Target Neighborhood Hits	454	Shared Neighborhood Hits	11
SwissProt Accessions	P08572	Gene names	COL4A2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

CO4A2_MOUSE
θ value	θ > 10 (rank : 25)	NC score	0.054354 (rank : 13)
Query Neighborhood Hits	16	Target Neighborhood Hits	492	Shared Neighborhood Hits	10
SwissProt Accessions	P08122, Q61375	Gene names	Col4a2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

CO4A6_HUMAN
θ value	θ > 10 (rank : 26)	NC score	0.053977 (rank : 14)
Query Neighborhood Hits	16	Target Neighborhood Hits	318	Shared Neighborhood Hits	8
SwissProt Accessions	Q14031, Q12823, Q14053, Q5JYH6, Q9NQM5, Q9NTX3, Q9UJ76, Q9UMG6, Q9Y4L4	Gene names	COL4A6
Domain Architecture
Description	Collagen alpha-6(IV) chain precursor.

CO5A1_HUMAN
θ value	θ > 10 (rank : 27)	NC score	0.051810 (rank : 17)
Query Neighborhood Hits	16	Target Neighborhood Hits	434	Shared Neighborhood Hits	8
SwissProt Accessions	P20908, Q15094, Q5SUX4	Gene names	COL5A1
Domain Architecture
Description	Collagen alpha-1(V) chain precursor.

CO5A1_MOUSE
θ value	θ > 10 (rank : 28)	NC score	0.052582 (rank : 16)
Query Neighborhood Hits	16	Target Neighborhood Hits	419	Shared Neighborhood Hits	8
SwissProt Accessions	O88207	Gene names	Col5a1
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(V) chain precursor.

Hits sorted by NC score

CC053_HUMAN
NC score	0.999962 (rank : 1)	θ value	1.54472e-92 (rank : 1)
Query Neighborhood Hits	16	Target Neighborhood Hits	16	Shared Neighborhood Hits	16
SwissProt Accessions	Q8N290	Gene names	C3orf53
Domain Architecture	No domain graphic available
Description	Putative uncharacterized protein C3orf53.

CO3A1_HUMAN
NC score	0.098505 (rank : 2)	θ value	0.00869519 (rank : 2)
Query Neighborhood Hits	16	Target Neighborhood Hits	452	Shared Neighborhood Hits	9
SwissProt Accessions	P02461, Q15112, Q16403, Q6LDB3, Q6LDJ2, Q6LDJ3, Q7KZ56	Gene names	COL3A1
Domain Architecture
Description	Collagen alpha-1(III) chain precursor.

CO3A1_MOUSE
NC score	0.093775 (rank : 3)	θ value	0.0330416 (rank : 3)
Query Neighborhood Hits	16	Target Neighborhood Hits	466	Shared Neighborhood Hits	9
SwissProt Accessions	P08121, Q61429, Q9CRN7	Gene names	Col3a1
Domain Architecture
Description	Collagen alpha-1(III) chain precursor.

CO1A2_MOUSE
NC score	0.078432 (rank : 4)	θ value	1.81305 (rank : 4)
Query Neighborhood Hits	16	Target Neighborhood Hits	388	Shared Neighborhood Hits	11
SwissProt Accessions	Q01149, Q8CGA5	Gene names	Col1a2, Cola2
Domain Architecture
Description	Collagen alpha-2(I) chain precursor.

CO1A2_HUMAN
NC score	0.071249 (rank : 5)	θ value	θ > 10 (rank : 19)
Query Neighborhood Hits	16	Target Neighborhood Hits	329	Shared Neighborhood Hits	9
SwissProt Accessions	P08123, P02464, Q9UEB6, Q9UPH0	Gene names	COL1A2
Domain Architecture
Description	Collagen alpha-2(I) chain precursor.

CO1A1_MOUSE
NC score	0.065942 (rank : 6)	θ value	θ > 10 (rank : 18)
Query Neighborhood Hits	16	Target Neighborhood Hits	457	Shared Neighborhood Hits	8
SwissProt Accessions	P11087, Q53WT0, Q60635, Q61367, Q61427, Q63919, Q6PCL3, Q810J9	Gene names	Col1a1, Cola1
Domain Architecture
Description	Collagen alpha-1(I) chain precursor.

CO1A1_HUMAN
NC score	0.065434 (rank : 7)	θ value	θ > 10 (rank : 17)
Query Neighborhood Hits	16	Target Neighborhood Hits	475	Shared Neighborhood Hits	9
SwissProt Accessions	P02452, P78441, Q13896, Q13902, Q13903, Q14037, Q14992, Q15176, Q15201, Q16050, Q7KZ30, Q7KZ34, Q8IVI5, Q9UML6, Q9UMM7	Gene names	COL1A1
Domain Architecture
Description	Collagen alpha-1(I) chain precursor.

CO2A1_MOUSE
NC score	0.065261 (rank : 8)	θ value	θ > 10 (rank : 21)
Query Neighborhood Hits	16	Target Neighborhood Hits	483	Shared Neighborhood Hits	9
SwissProt Accessions	P28481	Gene names	Col2a1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO5A2_HUMAN
NC score	0.064441 (rank : 9)	θ value	5.27518 (rank : 8)
Query Neighborhood Hits	16	Target Neighborhood Hits	760	Shared Neighborhood Hits	11
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

CO2A1_HUMAN
NC score	0.064003 (rank : 10)	θ value	θ > 10 (rank : 20)
Query Neighborhood Hits	16	Target Neighborhood Hits	486	Shared Neighborhood Hits	10
SwissProt Accessions	P02458, Q12985, Q14009, Q14044, Q14046, Q14056, Q14058, Q16672, Q6LBY1, Q6LBY2, Q6LBY3, Q99227, Q9UE38, Q9UE39, Q9UE40, Q9UE41, Q9UE42, Q9UE43	Gene names	COL2A1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

COAA1_MOUSE
NC score	0.059277 (rank : 11)	θ value	1.81305 (rank : 5)
Query Neighborhood Hits	16	Target Neighborhood Hits	286	Shared Neighborhood Hits	9
SwissProt Accessions	Q05306	Gene names	Col10a1
Domain Architecture
Description	Collagen alpha-1(X) chain precursor.

CO4A2_HUMAN
NC score	0.055166 (rank : 12)	θ value	θ > 10 (rank : 24)
Query Neighborhood Hits	16	Target Neighborhood Hits	454	Shared Neighborhood Hits	11
SwissProt Accessions	P08572	Gene names	COL4A2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

CO4A2_MOUSE
NC score	0.054354 (rank : 13)	θ value	θ > 10 (rank : 25)
Query Neighborhood Hits	16	Target Neighborhood Hits	492	Shared Neighborhood Hits	10
SwissProt Accessions	P08122, Q61375	Gene names	Col4a2
Domain Architecture
Description	Collagen alpha-2(IV) chain precursor.

CO4A6_HUMAN
NC score	0.053977 (rank : 14)	θ value	θ > 10 (rank : 26)
Query Neighborhood Hits	16	Target Neighborhood Hits	318	Shared Neighborhood Hits	8
SwissProt Accessions	Q14031, Q12823, Q14053, Q5JYH6, Q9NQM5, Q9NTX3, Q9UJ76, Q9UMG6, Q9Y4L4	Gene names	COL4A6
Domain Architecture
Description	Collagen alpha-6(IV) chain precursor.

CO4A1_MOUSE
NC score	0.052863 (rank : 15)	θ value	θ > 10 (rank : 23)
Query Neighborhood Hits	16	Target Neighborhood Hits	450	Shared Neighborhood Hits	9
SwissProt Accessions	P02463	Gene names	Col4a1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

CO5A1_MOUSE
NC score	0.052582 (rank : 16)	θ value	θ > 10 (rank : 28)
Query Neighborhood Hits	16	Target Neighborhood Hits	419	Shared Neighborhood Hits	8
SwissProt Accessions	O88207	Gene names	Col5a1
Domain Architecture	No domain graphic available
Description	Collagen alpha-1(V) chain precursor.

CO5A1_HUMAN
NC score	0.051810 (rank : 17)	θ value	θ > 10 (rank : 27)
Query Neighborhood Hits	16	Target Neighborhood Hits	434	Shared Neighborhood Hits	8
SwissProt Accessions	P20908, Q15094, Q5SUX4	Gene names	COL5A1
Domain Architecture
Description	Collagen alpha-1(V) chain precursor.

CO4A1_HUMAN
NC score	0.050813 (rank : 18)	θ value	θ > 10 (rank : 22)
Query Neighborhood Hits	16	Target Neighborhood Hits	425	Shared Neighborhood Hits	8
SwissProt Accessions	P02462	Gene names	COL4A1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

COAA1_HUMAN
NC score	0.042971 (rank : 19)	θ value	6.88961 (rank : 10)
Query Neighborhood Hits	16	Target Neighborhood Hits	316	Shared Neighborhood Hits	10
SwissProt Accessions	Q03692	Gene names	COL10A1
Domain Architecture
Description	Collagen alpha-1(X) chain precursor.

CO4A5_HUMAN
NC score	0.040266 (rank : 20)	θ value	5.27518 (rank : 7)
Query Neighborhood Hits	16	Target Neighborhood Hits	383	Shared Neighborhood Hits	10
SwissProt Accessions	P29400, Q16006, Q16126, Q6LD84	Gene names	COL4A5
Domain Architecture
Description	Collagen alpha-5(IV) chain precursor.

RABX5_HUMAN
NC score	0.039133 (rank : 21)	θ value	4.03905 (rank : 6)
Query Neighborhood Hits	16	Target Neighborhood Hits	68	Shared Neighborhood Hits	2
SwissProt Accessions	Q9UJ41	Gene names	RABGEF1, RABEX5
Domain Architecture
Description	Rab5 GDP/GTP exchange factor (Rabex-5) (Rabaptin-5-associated exchange factor for Rab5).

SMRC2_HUMAN
NC score	0.030984 (rank : 22)	θ value	6.88961 (rank : 12)
Query Neighborhood Hits	16	Target Neighborhood Hits	499	Shared Neighborhood Hits	5
SwissProt Accessions	Q8TAQ2, Q92923, Q96E12, Q96GY4	Gene names	SMARCC2, BAF170
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170).

SMRC2_MOUSE
NC score	0.030360 (rank : 23)	θ value	8.99809 (rank : 16)
Query Neighborhood Hits	16	Target Neighborhood Hits	487	Shared Neighborhood Hits	6
SwissProt Accessions	Q6PDG5, Q6P6P3	Gene names	Smarcc2, Baf170
Domain Architecture	No domain graphic available
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 2 (SWI/SNF complex 170 kDa subunit) (BRG1-associated factor 170).

NOXO1_HUMAN
NC score	0.029694 (rank : 24)	θ value	6.88961 (rank : 11)
Query Neighborhood Hits	16	Target Neighborhood Hits	100	Shared Neighborhood Hits	2
SwissProt Accessions	Q8NFA2, Q86YM1, Q8NFA3, Q96B73	Gene names	NOXO1, P41NOX
Domain Architecture	No domain graphic available
Description	NADPH oxidase organizer 1 (Nox organizer 1) (Nox-organizing protein 1) (NADPH oxidase regulatory protein).

RECQ5_HUMAN
NC score	0.017537 (rank : 25)	θ value	8.99809 (rank : 15)
Query Neighborhood Hits	16	Target Neighborhood Hits	390	Shared Neighborhood Hits	6
SwissProt Accessions	O94762, Q9P1W7, Q9UNC8	Gene names	RECQL5, RECQ5
Domain Architecture
Description	ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ protein-like 5) (RecQ5).

ZN687_HUMAN
NC score	0.015448 (rank : 26)	θ value	5.27518 (rank : 9)
Query Neighborhood Hits	16	Target Neighborhood Hits	1244	Shared Neighborhood Hits	12
SwissProt Accessions	Q8N1G0, Q68DQ8, Q9H937, Q9P2A7	Gene names	ZNF687, KIAA1441
Domain Architecture	No domain graphic available
Description	Zinc finger protein 687.

PRD13_HUMAN
NC score	0.006027 (rank : 27)	θ value	8.99809 (rank : 14)
Query Neighborhood Hits	16	Target Neighborhood Hits	716	Shared Neighborhood Hits	4
SwissProt Accessions	Q9H4Q3, Q5TGC1	Gene names	PRDM13, PFM10
Domain Architecture	No domain graphic available
Description	PR domain zinc finger protein 13 (PR domain-containing protein 13).

KLF11_MOUSE
NC score	0.004319 (rank : 28)	θ value	8.99809 (rank : 13)
Query Neighborhood Hits	16	Target Neighborhood Hits	714	Shared Neighborhood Hits	4
SwissProt Accessions	Q9EPF4	Gene names	Klf11, Tieg2
Domain Architecture	No domain graphic available
Description	Krueppel-like factor 11 (Transforming growth factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2).