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Network neighborhood for query Sequence : VHL_MOUSE

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VHL_MOUSE
 
SwissProt Accessions P40338 Gene names Vhl, Vhlh
Domain
Architecture
Description Von Hippel-Lindau disease tumor suppressor (pVHL).
Rank Plots



Hits sorted by θ


VHL_HUMAN
 
θ value 2.31364e-80 (rank : 1) NC score 0.990836 (rank : 2)
Query Neighborhood Hits 5 Target Neighborhood Hits 8 Shared Neighborhood Hits 3
SwissProt Accessions P40337, Q13599 Gene names VHL
Domain
Architecture
Description Von Hippel-Lindau disease tumor suppressor (pVHL) (G7 protein).
VHL_MOUSE
 
θ value 6.30065e-78 (rank : 2) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 5 Target Neighborhood Hits 5 Shared Neighborhood Hits 5
SwissProt Accessions P40338 Gene names Vhl, Vhlh
Domain
Architecture
Description Von Hippel-Lindau disease tumor suppressor (pVHL).
CPSF3_HUMAN
 
θ value 6.88961 (rank : 3) NC score 0.021683 (rank : 3)
Query Neighborhood Hits 5 Target Neighborhood Hits 13 Shared Neighborhood Hits 2
SwissProt Accessions Q9UKF6, O14769, Q96F36 Gene names CPSF3, CPSF73
Domain
Architecture
Description Cleavage and polyadenylation specificity factor 73 kDa subunit (CPSF 73 kDa subunit).
JHD2A_MOUSE
 
θ value 8.99809 (rank : 4) NC score 0.011603 (rank : 4)
Query Neighborhood Hits 5 Target Neighborhood Hits 123 Shared Neighborhood Hits 2
SwissProt Accessions Q6PCM1, Q2MJQ6, Q3TKW8, Q3UML3, Q6ZQ57, Q8K2J6, Q8K2K4, Q8R350 Gene names Jmjd1a, Jhdm2a, Kiaa0742
Domain
Architecture

No domain graphic available

Description JmjC domain-containing histone demethylation protein 2A (EC 1.14.11.-) (Jumonji domain-containing protein 1A).
LRC8C_MOUSE
 
θ value 8.99809 (rank : 5) NC score 0.010840 (rank : 5)
Query Neighborhood Hits 5 Target Neighborhood Hits 242 Shared Neighborhood Hits 3
SwissProt Accessions Q8R502, Q3TEP9, Q8C296, Q8R0N7, Q8R3G5 Gene names Lrrc8c, Ad158
Domain
Architecture

No domain graphic available

Description Leucine-rich repeat-containing protein 8C (Protein AD158).

Hits sorted by NC score


VHL_MOUSE
 
NC score 0.999962 (rank : 1) θ value 6.30065e-78 (rank : 2)
Query Neighborhood Hits 5 Target Neighborhood Hits 5 Shared Neighborhood Hits 5
SwissProt Accessions P40338 Gene names Vhl, Vhlh
Domain
Architecture
Description Von Hippel-Lindau disease tumor suppressor (pVHL).
VHL_HUMAN
 
NC score 0.990836 (rank : 2) θ value 2.31364e-80 (rank : 1)
Query Neighborhood Hits 5 Target Neighborhood Hits 8 Shared Neighborhood Hits 3
SwissProt Accessions P40337, Q13599 Gene names VHL
Domain
Architecture
Description Von Hippel-Lindau disease tumor suppressor (pVHL) (G7 protein).
CPSF3_HUMAN
 
NC score 0.021683 (rank : 3) θ value 6.88961 (rank : 3)
Query Neighborhood Hits 5 Target Neighborhood Hits 13 Shared Neighborhood Hits 2
SwissProt Accessions Q9UKF6, O14769, Q96F36 Gene names CPSF3, CPSF73
Domain
Architecture
Description Cleavage and polyadenylation specificity factor 73 kDa subunit (CPSF 73 kDa subunit).
JHD2A_MOUSE
 
NC score 0.011603 (rank : 4) θ value 8.99809 (rank : 4)
Query Neighborhood Hits 5 Target Neighborhood Hits 123 Shared Neighborhood Hits 2
SwissProt Accessions Q6PCM1, Q2MJQ6, Q3TKW8, Q3UML3, Q6ZQ57, Q8K2J6, Q8K2K4, Q8R350 Gene names Jmjd1a, Jhdm2a, Kiaa0742
Domain
Architecture

No domain graphic available

Description JmjC domain-containing histone demethylation protein 2A (EC 1.14.11.-) (Jumonji domain-containing protein 1A).
LRC8C_MOUSE
 
NC score 0.010840 (rank : 5) θ value 8.99809 (rank : 5)
Query Neighborhood Hits 5 Target Neighborhood Hits 242 Shared Neighborhood Hits 3
SwissProt Accessions Q8R502, Q3TEP9, Q8C296, Q8R0N7, Q8R3G5 Gene names Lrrc8c, Ad158
Domain
Architecture

No domain graphic available

Description Leucine-rich repeat-containing protein 8C (Protein AD158).