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Network neighborhood for query Sequence : SNPC1_MOUSE

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SNPC1_MOUSE
 
SwissProt Accessions Q8K0S9 Gene names Snapc1
Domain
Architecture

No domain graphic available

Description snRNA-activating protein complex subunit 1 (SNAPc subunit 1) (snRNA- activating protein complex 43 kDa subunit) (SNAPc 43 kDa subunit) (Small nuclear RNA-activating complex polypeptide 1).
Rank Plots



Hits sorted by θ


SNPC1_MOUSE
 
θ value 0 (rank : 1) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 16 Target Neighborhood Hits 16 Shared Neighborhood Hits 16
SwissProt Accessions Q8K0S9 Gene names Snapc1
Domain
Architecture

No domain graphic available

Description snRNA-activating protein complex subunit 1 (SNAPc subunit 1) (snRNA- activating protein complex 43 kDa subunit) (SNAPc 43 kDa subunit) (Small nuclear RNA-activating complex polypeptide 1).
SNPC1_HUMAN
 
θ value 4.71363e-158 (rank : 2) NC score 0.985756 (rank : 2)
Query Neighborhood Hits 16 Target Neighborhood Hits 26 Shared Neighborhood Hits 2
SwissProt Accessions Q16533 Gene names SNAPC1, SNAP43
Domain
Architecture

No domain graphic available

Description snRNA-activating protein complex subunit 1 (SNAPc subunit 1) (snRNA- activating protein complex 43 kDa subunit) (SNAPc 43 kDa subunit) (Small nuclear RNA-activating complex polypeptide 1) (Proximal sequence element-binding transcription factor subunit gamma) (PSE- binding factor subunit gamma) (PTF subunit gamma).
LIPA2_MOUSE
 
θ value 0.0736092 (rank : 3) NC score 0.023993 (rank : 8)
Query Neighborhood Hits 16 Target Neighborhood Hits 1282 Shared Neighborhood Hits 4
SwissProt Accessions Q8BSS9, Q8BN73 Gene names Ppfia2
Domain
Architecture
Description Liprin-alpha-2 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-2) (PTPRF-interacting protein alpha-2).
CAC1F_MOUSE
 
θ value 0.62314 (rank : 4) NC score 0.018873 (rank : 12)
Query Neighborhood Hits 16 Target Neighborhood Hits 142 Shared Neighborhood Hits 2
SwissProt Accessions Q9JIS7 Gene names Cacna1f
Domain
Architecture
Description Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage- gated calcium channel subunit alpha Cav1.4).
NIPBL_HUMAN
 
θ value 0.813845 (rank : 5) NC score 0.041012 (rank : 4)
Query Neighborhood Hits 16 Target Neighborhood Hits 1311 Shared Neighborhood Hits 11
SwissProt Accessions Q6KC79, Q6KCD6, Q6N080, Q6ZT92, Q7Z2E6, Q8N4M5, Q9Y6Y3, Q9Y6Y4 Gene names NIPBL, IDN3
Domain
Architecture

No domain graphic available

Description Nipped-B-like protein (Delangin) (SCC2 homolog).
NPBL_MOUSE
 
θ value 0.813845 (rank : 6) NC score 0.045035 (rank : 3)
Query Neighborhood Hits 16 Target Neighborhood Hits 1041 Shared Neighborhood Hits 9
SwissProt Accessions Q6KCD5, Q6KC78, Q7TNS4, Q8BKV4, Q8CES9, Q9CUC6 Gene names Nipbl
Domain
Architecture

No domain graphic available

Description Nipped-B-like protein (Delangin homolog) (SCC2 homolog).
SFRS2_HUMAN
 
θ value 1.38821 (rank : 7) NC score 0.032844 (rank : 5)
Query Neighborhood Hits 16 Target Neighborhood Hits 222 Shared Neighborhood Hits 5
SwissProt Accessions Q01130 Gene names SFRS2
Domain
Architecture
Description Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) (Protein PR264).
SFRS2_MOUSE
 
θ value 1.38821 (rank : 8) NC score 0.032844 (rank : 6)
Query Neighborhood Hits 16 Target Neighborhood Hits 222 Shared Neighborhood Hits 5
SwissProt Accessions Q62093, Q542L3, Q60701 Gene names Sfrs2, Pr264, Sfrs10
Domain
Architecture
Description Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) (Protein PR264) (Putative myelin regulatory factor 1) (MRF-1).
ATRX_MOUSE
 
θ value 4.03905 (rank : 9) NC score 0.019028 (rank : 11)
Query Neighborhood Hits 16 Target Neighborhood Hits 682 Shared Neighborhood Hits 7
SwissProt Accessions Q61687 Gene names Atrx, Hp1bp2, Xnp
Domain
Architecture
Description Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent helicase ATRX) (X-linked nuclear protein) (Heterochromatin protein 2) (HP1 alpha-interacting protein) (HP1-BP38 protein).
ATAD2_HUMAN
 
θ value 5.27518 (rank : 10) NC score 0.011508 (rank : 14)
Query Neighborhood Hits 16 Target Neighborhood Hits 322 Shared Neighborhood Hits 5
SwissProt Accessions Q6PL18, Q658P2, Q68CQ0, Q6PJV6, Q8N890, Q9UHS5 Gene names ATAD2
Domain
Architecture

No domain graphic available

Description ATPase family AAA domain-containing protein 2.
FILA_HUMAN
 
θ value 5.27518 (rank : 11) NC score 0.021133 (rank : 10)
Query Neighborhood Hits 16 Target Neighborhood Hits 685 Shared Neighborhood Hits 7
SwissProt Accessions P20930, Q01720, Q5T583 Gene names FLG
Domain
Architecture

No domain graphic available

Description Filaggrin.
COMD9_HUMAN
 
θ value 6.88961 (rank : 12) NC score 0.024797 (rank : 7)
Query Neighborhood Hits 16 Target Neighborhood Hits 15 Shared Neighborhood Hits 2
SwissProt Accessions Q9P000, Q96FI2, Q9H0R0 Gene names COMMD9
Domain
Architecture

No domain graphic available

Description COMM domain-containing protein 9.
PELO_HUMAN
 
θ value 6.88961 (rank : 13) NC score 0.021986 (rank : 9)
Query Neighborhood Hits 16 Target Neighborhood Hits 6 Shared Neighborhood Hits 2
SwissProt Accessions Q9BRX2, Q9GZS6, Q9Y306 Gene names PELO
Domain
Architecture

No domain graphic available

Description Protein pelota homolog.
AFF4_MOUSE
 
θ value 8.99809 (rank : 14) NC score 0.017789 (rank : 13)
Query Neighborhood Hits 16 Target Neighborhood Hits 581 Shared Neighborhood Hits 6
SwissProt Accessions Q9ESC8, Q8C6K4, Q8C6W3, Q8CCH3 Gene names Aff4, Alf4
Domain
Architecture

No domain graphic available

Description AF4/FMR2 family member 4.
GLI3_MOUSE
 
θ value 8.99809 (rank : 15) NC score 0.001811 (rank : 16)
Query Neighborhood Hits 16 Target Neighborhood Hits 807 Shared Neighborhood Hits 2
SwissProt Accessions Q61602 Gene names Gli3
Domain
Architecture

No domain graphic available

Description Zinc finger protein GLI3.
TRI44_HUMAN
 
θ value 8.99809 (rank : 16) NC score 0.011316 (rank : 15)
Query Neighborhood Hits 16 Target Neighborhood Hits 393 Shared Neighborhood Hits 3
SwissProt Accessions Q96DX7, Q96QY2, Q9UGK0 Gene names TRIM44, DIPB
Domain
Architecture

No domain graphic available

Description Tripartite motif-containing protein 44 (Protein DIPB).

Hits sorted by NC score


SNPC1_MOUSE
 
NC score 0.999962 (rank : 1) θ value 0 (rank : 1)
Query Neighborhood Hits 16 Target Neighborhood Hits 16 Shared Neighborhood Hits 16
SwissProt Accessions Q8K0S9 Gene names Snapc1
Domain
Architecture

No domain graphic available

Description snRNA-activating protein complex subunit 1 (SNAPc subunit 1) (snRNA- activating protein complex 43 kDa subunit) (SNAPc 43 kDa subunit) (Small nuclear RNA-activating complex polypeptide 1).
SNPC1_HUMAN
 
NC score 0.985756 (rank : 2) θ value 4.71363e-158 (rank : 2)
Query Neighborhood Hits 16 Target Neighborhood Hits 26 Shared Neighborhood Hits 2
SwissProt Accessions Q16533 Gene names SNAPC1, SNAP43
Domain
Architecture

No domain graphic available

Description snRNA-activating protein complex subunit 1 (SNAPc subunit 1) (snRNA- activating protein complex 43 kDa subunit) (SNAPc 43 kDa subunit) (Small nuclear RNA-activating complex polypeptide 1) (Proximal sequence element-binding transcription factor subunit gamma) (PSE- binding factor subunit gamma) (PTF subunit gamma).
NPBL_MOUSE
 
NC score 0.045035 (rank : 3) θ value 0.813845 (rank : 6)
Query Neighborhood Hits 16 Target Neighborhood Hits 1041 Shared Neighborhood Hits 9
SwissProt Accessions Q6KCD5, Q6KC78, Q7TNS4, Q8BKV4, Q8CES9, Q9CUC6 Gene names Nipbl
Domain
Architecture

No domain graphic available

Description Nipped-B-like protein (Delangin homolog) (SCC2 homolog).
NIPBL_HUMAN
 
NC score 0.041012 (rank : 4) θ value 0.813845 (rank : 5)
Query Neighborhood Hits 16 Target Neighborhood Hits 1311 Shared Neighborhood Hits 11
SwissProt Accessions Q6KC79, Q6KCD6, Q6N080, Q6ZT92, Q7Z2E6, Q8N4M5, Q9Y6Y3, Q9Y6Y4 Gene names NIPBL, IDN3
Domain
Architecture

No domain graphic available

Description Nipped-B-like protein (Delangin) (SCC2 homolog).
SFRS2_HUMAN
 
NC score 0.032844 (rank : 5) θ value 1.38821 (rank : 7)
Query Neighborhood Hits 16 Target Neighborhood Hits 222 Shared Neighborhood Hits 5
SwissProt Accessions Q01130 Gene names SFRS2
Domain
Architecture
Description Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) (Protein PR264).
SFRS2_MOUSE
 
NC score 0.032844 (rank : 6) θ value 1.38821 (rank : 8)
Query Neighborhood Hits 16 Target Neighborhood Hits 222 Shared Neighborhood Hits 5
SwissProt Accessions Q62093, Q542L3, Q60701 Gene names Sfrs2, Pr264, Sfrs10
Domain
Architecture
Description Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) (Protein PR264) (Putative myelin regulatory factor 1) (MRF-1).
COMD9_HUMAN
 
NC score 0.024797 (rank : 7) θ value 6.88961 (rank : 12)
Query Neighborhood Hits 16 Target Neighborhood Hits 15 Shared Neighborhood Hits 2
SwissProt Accessions Q9P000, Q96FI2, Q9H0R0 Gene names COMMD9
Domain
Architecture

No domain graphic available

Description COMM domain-containing protein 9.
LIPA2_MOUSE
 
NC score 0.023993 (rank : 8) θ value 0.0736092 (rank : 3)
Query Neighborhood Hits 16 Target Neighborhood Hits 1282 Shared Neighborhood Hits 4
SwissProt Accessions Q8BSS9, Q8BN73 Gene names Ppfia2
Domain
Architecture
Description Liprin-alpha-2 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-2) (PTPRF-interacting protein alpha-2).
PELO_HUMAN
 
NC score 0.021986 (rank : 9) θ value 6.88961 (rank : 13)
Query Neighborhood Hits 16 Target Neighborhood Hits 6 Shared Neighborhood Hits 2
SwissProt Accessions Q9BRX2, Q9GZS6, Q9Y306 Gene names PELO
Domain
Architecture

No domain graphic available

Description Protein pelota homolog.
FILA_HUMAN
 
NC score 0.021133 (rank : 10) θ value 5.27518 (rank : 11)
Query Neighborhood Hits 16 Target Neighborhood Hits 685 Shared Neighborhood Hits 7
SwissProt Accessions P20930, Q01720, Q5T583 Gene names FLG
Domain
Architecture

No domain graphic available

Description Filaggrin.
ATRX_MOUSE
 
NC score 0.019028 (rank : 11) θ value 4.03905 (rank : 9)
Query Neighborhood Hits 16 Target Neighborhood Hits 682 Shared Neighborhood Hits 7
SwissProt Accessions Q61687 Gene names Atrx, Hp1bp2, Xnp
Domain
Architecture
Description Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent helicase ATRX) (X-linked nuclear protein) (Heterochromatin protein 2) (HP1 alpha-interacting protein) (HP1-BP38 protein).
CAC1F_MOUSE
 
NC score 0.018873 (rank : 12) θ value 0.62314 (rank : 4)
Query Neighborhood Hits 16 Target Neighborhood Hits 142 Shared Neighborhood Hits 2
SwissProt Accessions Q9JIS7 Gene names Cacna1f
Domain
Architecture
Description Voltage-dependent L-type calcium channel subunit alpha-1F (Voltage- gated calcium channel subunit alpha Cav1.4).
AFF4_MOUSE
 
NC score 0.017789 (rank : 13) θ value 8.99809 (rank : 14)
Query Neighborhood Hits 16 Target Neighborhood Hits 581 Shared Neighborhood Hits 6
SwissProt Accessions Q9ESC8, Q8C6K4, Q8C6W3, Q8CCH3 Gene names Aff4, Alf4
Domain
Architecture

No domain graphic available

Description AF4/FMR2 family member 4.
ATAD2_HUMAN
 
NC score 0.011508 (rank : 14) θ value 5.27518 (rank : 10)
Query Neighborhood Hits 16 Target Neighborhood Hits 322 Shared Neighborhood Hits 5
SwissProt Accessions Q6PL18, Q658P2, Q68CQ0, Q6PJV6, Q8N890, Q9UHS5 Gene names ATAD2
Domain
Architecture

No domain graphic available

Description ATPase family AAA domain-containing protein 2.
TRI44_HUMAN
 
NC score 0.011316 (rank : 15) θ value 8.99809 (rank : 16)
Query Neighborhood Hits 16 Target Neighborhood Hits 393 Shared Neighborhood Hits 3
SwissProt Accessions Q96DX7, Q96QY2, Q9UGK0 Gene names TRIM44, DIPB
Domain
Architecture

No domain graphic available

Description Tripartite motif-containing protein 44 (Protein DIPB).
GLI3_MOUSE
 
NC score 0.001811 (rank : 16) θ value 8.99809 (rank : 15)
Query Neighborhood Hits 16 Target Neighborhood Hits 807 Shared Neighborhood Hits 2
SwissProt Accessions Q61602 Gene names Gli3
Domain
Architecture

No domain graphic available

Description Zinc finger protein GLI3.