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Network neighborhood for query Sequence : RS2_MOUSE

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RS2_MOUSE
SwissProt Accessions	P25444	Gene names	Rps2, Llrep3, Rps4
Domain Architecture
Description	40S ribosomal protein S2 (S4) (LLRep3 protein).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

RS2_MOUSE
θ value	5.07123e-136 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P25444	Gene names	Rps2, Llrep3, Rps4
Domain Architecture
Description	40S ribosomal protein S2 (S4) (LLRep3 protein).

RS2_HUMAN
θ value	1.12976e-135 (rank : 2)	NC score	0.996182 (rank : 2)
Query Neighborhood Hits	14	Target Neighborhood Hits	7	Shared Neighborhood Hits	6
SwissProt Accessions	P15880, Q3MIB1	Gene names	RPS2, RPS4
Domain Architecture
Description	40S ribosomal protein S2 (S4) (LLRep3 protein).

CO4A3_HUMAN
θ value	1.06291 (rank : 3)	NC score	0.038864 (rank : 8)
Query Neighborhood Hits	14	Target Neighborhood Hits	421	Shared Neighborhood Hits	11
SwissProt Accessions	Q01955, Q9BQT2	Gene names	COL4A3
Domain Architecture
Description	Collagen alpha-3(IV) chain precursor (Goodpasture antigen).

CO4A6_HUMAN
θ value	1.06291 (rank : 4)	NC score	0.042877 (rank : 6)
Query Neighborhood Hits	14	Target Neighborhood Hits	318	Shared Neighborhood Hits	12
SwissProt Accessions	Q14031, Q12823, Q14053, Q5JYH6, Q9NQM5, Q9NTX3, Q9UJ76, Q9UMG6, Q9Y4L4	Gene names	COL4A6
Domain Architecture
Description	Collagen alpha-6(IV) chain precursor.

CTHR1_HUMAN
θ value	1.06291 (rank : 5)	NC score	0.071312 (rank : 3)
Query Neighborhood Hits	14	Target Neighborhood Hits	126	Shared Neighborhood Hits	11
SwissProt Accessions	Q96CG8, Q6UW91, Q8IX63	Gene names	CTHRC1
Domain Architecture	No domain graphic available
Description	Collagen triple helix repeat-containing protein 1 precursor (NMTC1 protein).

CTHR1_MOUSE
θ value	1.06291 (rank : 6)	NC score	0.071221 (rank : 4)
Query Neighborhood Hits	14	Target Neighborhood Hits	123	Shared Neighborhood Hits	11
SwissProt Accessions	Q9D1D6	Gene names	Cthrc1
Domain Architecture	No domain graphic available
Description	Collagen triple helix repeat-containing protein 1 precursor.

RT05_MOUSE
θ value	1.38821 (rank : 7)	NC score	0.069326 (rank : 5)
Query Neighborhood Hits	14	Target Neighborhood Hits	8	Shared Neighborhood Hits	3
SwissProt Accessions	Q99N87	Gene names	Mrps5
Domain Architecture
Description	Mitochondrial 28S ribosomal protein S5 (S5mt) (MRP-S5).

CO7A1_HUMAN
θ value	1.81305 (rank : 8)	NC score	0.032198 (rank : 13)
Query Neighborhood Hits	14	Target Neighborhood Hits	807	Shared Neighborhood Hits	12
SwissProt Accessions	Q02388, Q14054, Q16507	Gene names	COL7A1
Domain Architecture
Description	Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen).

SAFB1_HUMAN
θ value	1.81305 (rank : 9)	NC score	0.040640 (rank : 7)
Query Neighborhood Hits	14	Target Neighborhood Hits	493	Shared Neighborhood Hits	3
SwissProt Accessions	Q15424, O60406, Q59HH8	Gene names	SAFB, HAP, HET, SAFB1
Domain Architecture
Description	Scaffold attachment factor B (Scaffold attachment factor B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE- TATA-binding protein).

CO2A1_HUMAN
θ value	4.03905 (rank : 10)	NC score	0.036813 (rank : 10)
Query Neighborhood Hits	14	Target Neighborhood Hits	486	Shared Neighborhood Hits	11
SwissProt Accessions	P02458, Q12985, Q14009, Q14044, Q14046, Q14056, Q14058, Q16672, Q6LBY1, Q6LBY2, Q6LBY3, Q99227, Q9UE38, Q9UE39, Q9UE40, Q9UE41, Q9UE42, Q9UE43	Gene names	COL2A1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO2A1_MOUSE
θ value	4.03905 (rank : 11)	NC score	0.037149 (rank : 9)
Query Neighborhood Hits	14	Target Neighborhood Hits	483	Shared Neighborhood Hits	11
SwissProt Accessions	P28481	Gene names	Col2a1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO5A2_HUMAN
θ value	4.03905 (rank : 12)	NC score	0.031813 (rank : 14)
Query Neighborhood Hits	14	Target Neighborhood Hits	760	Shared Neighborhood Hits	11
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.

CO4A1_MOUSE
θ value	6.88961 (rank : 13)	NC score	0.034313 (rank : 11)
Query Neighborhood Hits	14	Target Neighborhood Hits	450	Shared Neighborhood Hits	11
SwissProt Accessions	P02463	Gene names	Col4a1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

COJA1_HUMAN
θ value	8.99809 (rank : 14)	NC score	0.033673 (rank : 12)
Query Neighborhood Hits	14	Target Neighborhood Hits	323	Shared Neighborhood Hits	11
SwissProt Accessions	Q14993, Q00559, Q05850, Q12885, Q13676, Q5JUF0, Q5T424, Q9H572, Q9NPZ2, Q9NQP2	Gene names	COL19A1
Domain Architecture
Description	Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y) chain).

Hits sorted by NC score

RS2_MOUSE
NC score	0.999962 (rank : 1)	θ value	5.07123e-136 (rank : 1)
Query Neighborhood Hits	14	Target Neighborhood Hits	14	Shared Neighborhood Hits	14
SwissProt Accessions	P25444	Gene names	Rps2, Llrep3, Rps4
Domain Architecture
Description	40S ribosomal protein S2 (S4) (LLRep3 protein).

RS2_HUMAN
NC score	0.996182 (rank : 2)	θ value	1.12976e-135 (rank : 2)
Query Neighborhood Hits	14	Target Neighborhood Hits	7	Shared Neighborhood Hits	6
SwissProt Accessions	P15880, Q3MIB1	Gene names	RPS2, RPS4
Domain Architecture
Description	40S ribosomal protein S2 (S4) (LLRep3 protein).

CTHR1_HUMAN
NC score	0.071312 (rank : 3)	θ value	1.06291 (rank : 5)
Query Neighborhood Hits	14	Target Neighborhood Hits	126	Shared Neighborhood Hits	11
SwissProt Accessions	Q96CG8, Q6UW91, Q8IX63	Gene names	CTHRC1
Domain Architecture	No domain graphic available
Description	Collagen triple helix repeat-containing protein 1 precursor (NMTC1 protein).

CTHR1_MOUSE
NC score	0.071221 (rank : 4)	θ value	1.06291 (rank : 6)
Query Neighborhood Hits	14	Target Neighborhood Hits	123	Shared Neighborhood Hits	11
SwissProt Accessions	Q9D1D6	Gene names	Cthrc1
Domain Architecture	No domain graphic available
Description	Collagen triple helix repeat-containing protein 1 precursor.

RT05_MOUSE
NC score	0.069326 (rank : 5)	θ value	1.38821 (rank : 7)
Query Neighborhood Hits	14	Target Neighborhood Hits	8	Shared Neighborhood Hits	3
SwissProt Accessions	Q99N87	Gene names	Mrps5
Domain Architecture
Description	Mitochondrial 28S ribosomal protein S5 (S5mt) (MRP-S5).

CO4A6_HUMAN
NC score	0.042877 (rank : 6)	θ value	1.06291 (rank : 4)
Query Neighborhood Hits	14	Target Neighborhood Hits	318	Shared Neighborhood Hits	12
SwissProt Accessions	Q14031, Q12823, Q14053, Q5JYH6, Q9NQM5, Q9NTX3, Q9UJ76, Q9UMG6, Q9Y4L4	Gene names	COL4A6
Domain Architecture
Description	Collagen alpha-6(IV) chain precursor.

SAFB1_HUMAN
NC score	0.040640 (rank : 7)	θ value	1.81305 (rank : 9)
Query Neighborhood Hits	14	Target Neighborhood Hits	493	Shared Neighborhood Hits	3
SwissProt Accessions	Q15424, O60406, Q59HH8	Gene names	SAFB, HAP, HET, SAFB1
Domain Architecture
Description	Scaffold attachment factor B (Scaffold attachment factor B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE- TATA-binding protein).

CO4A3_HUMAN
NC score	0.038864 (rank : 8)	θ value	1.06291 (rank : 3)
Query Neighborhood Hits	14	Target Neighborhood Hits	421	Shared Neighborhood Hits	11
SwissProt Accessions	Q01955, Q9BQT2	Gene names	COL4A3
Domain Architecture
Description	Collagen alpha-3(IV) chain precursor (Goodpasture antigen).

CO2A1_MOUSE
NC score	0.037149 (rank : 9)	θ value	4.03905 (rank : 11)
Query Neighborhood Hits	14	Target Neighborhood Hits	483	Shared Neighborhood Hits	11
SwissProt Accessions	P28481	Gene names	Col2a1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO2A1_HUMAN
NC score	0.036813 (rank : 10)	θ value	4.03905 (rank : 10)
Query Neighborhood Hits	14	Target Neighborhood Hits	486	Shared Neighborhood Hits	11
SwissProt Accessions	P02458, Q12985, Q14009, Q14044, Q14046, Q14056, Q14058, Q16672, Q6LBY1, Q6LBY2, Q6LBY3, Q99227, Q9UE38, Q9UE39, Q9UE40, Q9UE41, Q9UE42, Q9UE43	Gene names	COL2A1
Domain Architecture
Description	Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin].

CO4A1_MOUSE
NC score	0.034313 (rank : 11)	θ value	6.88961 (rank : 13)
Query Neighborhood Hits	14	Target Neighborhood Hits	450	Shared Neighborhood Hits	11
SwissProt Accessions	P02463	Gene names	Col4a1
Domain Architecture
Description	Collagen alpha-1(IV) chain precursor.

COJA1_HUMAN
NC score	0.033673 (rank : 12)	θ value	8.99809 (rank : 14)
Query Neighborhood Hits	14	Target Neighborhood Hits	323	Shared Neighborhood Hits	11
SwissProt Accessions	Q14993, Q00559, Q05850, Q12885, Q13676, Q5JUF0, Q5T424, Q9H572, Q9NPZ2, Q9NQP2	Gene names	COL19A1
Domain Architecture
Description	Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y) chain).

CO7A1_HUMAN
NC score	0.032198 (rank : 13)	θ value	1.81305 (rank : 8)
Query Neighborhood Hits	14	Target Neighborhood Hits	807	Shared Neighborhood Hits	12
SwissProt Accessions	Q02388, Q14054, Q16507	Gene names	COL7A1
Domain Architecture
Description	Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen).

CO5A2_HUMAN
NC score	0.031813 (rank : 14)	θ value	4.03905 (rank : 12)
Query Neighborhood Hits	14	Target Neighborhood Hits	760	Shared Neighborhood Hits	11
SwissProt Accessions	P05997	Gene names	COL5A2
Domain Architecture
Description	Collagen alpha-2(V) chain precursor.