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Network neighborhood for query Sequence : RFX2_MOUSE

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RFX2_MOUSE
SwissProt Accessions	P48379	Gene names	Rfx2
Domain Architecture
Description	DNA-binding protein RFX2.
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

RFX1_HUMAN
θ value	0 (rank : 1)	NC score	0.934246 (rank : 6)
Query Neighborhood Hits	24	Target Neighborhood Hits	256	Shared Neighborhood Hits	11
SwissProt Accessions	P22670	Gene names	RFX1
Domain Architecture
Description	MHC class II regulatory factor RFX1 (RFX) (Enhancer factor C) (EF-C).

RFX1_MOUSE
θ value	0 (rank : 2)	NC score	0.956579 (rank : 5)
Query Neighborhood Hits	24	Target Neighborhood Hits	181	Shared Neighborhood Hits	12
SwissProt Accessions	P48377	Gene names	Rfx1
Domain Architecture
Description	DNA-binding protein RFX1.

RFX2_HUMAN
θ value	0 (rank : 3)	NC score	0.996692 (rank : 2)
Query Neighborhood Hits	24	Target Neighborhood Hits	29	Shared Neighborhood Hits	11
SwissProt Accessions	P48378	Gene names	RFX2
Domain Architecture
Description	DNA-binding protein RFX2.

RFX2_MOUSE
θ value	0 (rank : 4)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	24	Target Neighborhood Hits	24	Shared Neighborhood Hits	24
SwissProt Accessions	P48379	Gene names	Rfx2
Domain Architecture
Description	DNA-binding protein RFX2.

RFX3_HUMAN
θ value	0 (rank : 5)	NC score	0.991995 (rank : 4)
Query Neighborhood Hits	24	Target Neighborhood Hits	18	Shared Neighborhood Hits	9
SwissProt Accessions	P48380, Q5JTL7, Q5JTL8, Q6NW13, Q8WTU4, Q95HL5, Q95HL6	Gene names	RFX3
Domain Architecture
Description	Transcription factor RFX3.

RFX3_MOUSE
θ value	0 (rank : 6)	NC score	0.992076 (rank : 3)
Query Neighborhood Hits	24	Target Neighborhood Hits	17	Shared Neighborhood Hits	9
SwissProt Accessions	P48381, Q8BLW2, Q8C0R3, Q8VBY6	Gene names	Rfx3
Domain Architecture
Description	Transcription factor RFX3.

RFX5_HUMAN
θ value	1.9326e-10 (rank : 7)	NC score	0.544982 (rank : 7)
Query Neighborhood Hits	24	Target Neighborhood Hits	59	Shared Neighborhood Hits	8
SwissProt Accessions	P48382	Gene names	RFX5
Domain Architecture
Description	DNA-binding protein RFX5 (Regulatory factor X subunit 5).

RGS3_HUMAN
θ value	0.279714 (rank : 8)	NC score	0.020199 (rank : 10)
Query Neighborhood Hits	24	Target Neighborhood Hits	1375	Shared Neighborhood Hits	9
SwissProt Accessions	P49796, Q5VXC1, Q5VZ05, Q6ZRM5, Q8IUQ1, Q8NC47, Q8NFN4, Q8NFN5, Q8TD59, Q8TD68, Q8WXA0	Gene names	RGS3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (RGP3).

ARID2_HUMAN
θ value	0.62314 (rank : 9)	NC score	0.095007 (rank : 8)
Query Neighborhood Hits	24	Target Neighborhood Hits	302	Shared Neighborhood Hits	11
SwissProt Accessions	Q68CP9, Q5EB51, Q645I3, Q6ZRY5, Q7Z3I5, Q86T28, Q96SJ6, Q9HCL5	Gene names	ARID2, KIAA1557
Domain Architecture	No domain graphic available
Description	AT-rich interactive domain-containing protein 2 (ARID domain- containing protein 2) (BRG1-associated factor 200) (BAF200).

YLPM1_MOUSE
θ value	0.813845 (rank : 10)	NC score	0.027418 (rank : 9)
Query Neighborhood Hits	24	Target Neighborhood Hits	505	Shared Neighborhood Hits	8
SwissProt Accessions	Q9R0I7, Q7TMM4	Gene names	Ylpm1, Zap, Zap3
Domain Architecture	No domain graphic available
Description	YLP motif-containing protein 1 (Nuclear protein ZAP3).

SOX3_HUMAN
θ value	1.81305 (rank : 11)	NC score	0.012286 (rank : 15)
Query Neighborhood Hits	24	Target Neighborhood Hits	109	Shared Neighborhood Hits	3
SwissProt Accessions	P41225, P35714, Q9NP49	Gene names	SOX3
Domain Architecture
Description	Transcription factor SOX-3.

ABCAD_MOUSE
θ value	2.36792 (rank : 12)	NC score	0.009321 (rank : 18)
Query Neighborhood Hits	24	Target Neighborhood Hits	150	Shared Neighborhood Hits	4
SwissProt Accessions	Q5SSE9, Q80T20, Q8BHZ2, Q8CB91	Gene names	Abca13
Domain Architecture	No domain graphic available
Description	ATP-binding cassette sub-family A member 13.

BNC1_MOUSE
θ value	4.03905 (rank : 13)	NC score	0.008370 (rank : 22)
Query Neighborhood Hits	24	Target Neighborhood Hits	582	Shared Neighborhood Hits	2
SwissProt Accessions	O35914, O54886	Gene names	Bnc1, Bnc
Domain Architecture	No domain graphic available
Description	Zinc finger protein basonuclin-1.

SOX3_MOUSE
θ value	4.03905 (rank : 14)	NC score	0.010321 (rank : 17)
Query Neighborhood Hits	24	Target Neighborhood Hits	101	Shared Neighborhood Hits	3
SwissProt Accessions	P53784	Gene names	Sox3, Sox-3
Domain Architecture
Description	Transcription factor SOX-3.

TCF20_MOUSE
θ value	4.03905 (rank : 15)	NC score	0.014626 (rank : 13)
Query Neighborhood Hits	24	Target Neighborhood Hits	396	Shared Neighborhood Hits	5
SwissProt Accessions	Q9EPQ8, Q60792	Gene names	Tcf20, Spbp
Domain Architecture	No domain graphic available
Description	Transcription factor 20 (Stromelysin 1 PDGF-responsive element-binding protein) (SPRE-binding protein) (Nuclear factor SPBP).

NCOA6_MOUSE
θ value	5.27518 (rank : 16)	NC score	0.012087 (rank : 16)
Query Neighborhood Hits	24	Target Neighborhood Hits	1076	Shared Neighborhood Hits	10
SwissProt Accessions	Q9JL19, Q9JLT9	Gene names	Ncoa6, Aib3, Prip, Rap250, Trbp
Domain Architecture	No domain graphic available
Description	Nuclear receptor coactivator 6 (Amplified in breast cancer protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (PPAR-interacting protein) (Nuclear receptor-activating protein, 250 kDa) (Nuclear receptor coactivator RAP250) (NRC) (Thyroid hormone receptor-binding protein).

U689_HUMAN
θ value	5.27518 (rank : 17)	NC score	0.018075 (rank : 11)
Query Neighborhood Hits	24	Target Neighborhood Hits	26	Shared Neighborhood Hits	2
SwissProt Accessions	Q6UX39	Gene names	ames=UNQ689/PRO1329
Domain Architecture	No domain graphic available
Description	Protein UNQ689/PRO1329 precursor.

PAX7_HUMAN
θ value	6.88961 (rank : 18)	NC score	0.001998 (rank : 24)
Query Neighborhood Hits	24	Target Neighborhood Hits	456	Shared Neighborhood Hits	2
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).

SYNE1_HUMAN
θ value	6.88961 (rank : 19)	NC score	0.008722 (rank : 20)
Query Neighborhood Hits	24	Target Neighborhood Hits	1484	Shared Neighborhood Hits	8
SwissProt Accessions	Q8NF91, O94890, Q5JV19, Q5JV22, Q8N9P7, Q8TCP1, Q8WWW6, Q8WWW7, Q8WXF6, Q96N17, Q9C0A7, Q9H525, Q9H526, Q9NS36, Q9NU50, Q9UJ06, Q9UJ07, Q9ULF8	Gene names	SYNE1, KIAA0796, KIAA1262, KIAA1756, MYNE1
Domain Architecture
Description	Nesprin-1 (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin).

GOGB1_HUMAN
θ value	8.99809 (rank : 20)	NC score	0.002727 (rank : 23)
Query Neighborhood Hits	24	Target Neighborhood Hits	2297	Shared Neighborhood Hits	8
SwissProt Accessions	Q14789, Q14398	Gene names	GOLGB1
Domain Architecture
Description	Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa Golgi complex-associated protein) (GCP372).

GPTC8_HUMAN
θ value	8.99809 (rank : 21)	NC score	0.008385 (rank : 21)
Query Neighborhood Hits	24	Target Neighborhood Hits	366	Shared Neighborhood Hits	4
SwissProt Accessions	Q9UKJ3, O60300	Gene names	GPATC8, KIAA0553
Domain Architecture	No domain graphic available
Description	G patch domain-containing protein 8.

K0020_MOUSE
θ value	8.99809 (rank : 22)	NC score	0.008811 (rank : 19)
Query Neighborhood Hits	24	Target Neighborhood Hits	49	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BKS9, Q6A0E6, Q8BU15	Gene names	Kiaa0020
Domain Architecture	No domain graphic available
Description	Protein KIAA0020.

MINT_MOUSE
θ value	8.99809 (rank : 23)	NC score	0.016994 (rank : 12)
Query Neighborhood Hits	24	Target Neighborhood Hits	1514	Shared Neighborhood Hits	10
SwissProt Accessions	Q62504, Q80TN9, Q99PS4, Q9QZW2	Gene names	Spen, Kiaa0929, Mint, Sharp
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

TCF20_HUMAN
θ value	8.99809 (rank : 24)	NC score	0.013420 (rank : 14)
Query Neighborhood Hits	24	Target Neighborhood Hits	323	Shared Neighborhood Hits	5
SwissProt Accessions	Q9UGU0, O14528, Q13078, Q4V353, Q9H4M0	Gene names	TCF20, KIAA0292, SPBP
Domain Architecture	No domain graphic available
Description	Transcription factor 20 (Stromelysin 1 PDGF-responsive element-binding protein) (SPRE-binding protein) (Nuclear factor SPBP) (AR1).

Hits sorted by NC score

RFX2_MOUSE
NC score	0.999962 (rank : 1)	θ value	0 (rank : 4)
Query Neighborhood Hits	24	Target Neighborhood Hits	24	Shared Neighborhood Hits	24
SwissProt Accessions	P48379	Gene names	Rfx2
Domain Architecture
Description	DNA-binding protein RFX2.

RFX2_HUMAN
NC score	0.996692 (rank : 2)	θ value	0 (rank : 3)
Query Neighborhood Hits	24	Target Neighborhood Hits	29	Shared Neighborhood Hits	11
SwissProt Accessions	P48378	Gene names	RFX2
Domain Architecture
Description	DNA-binding protein RFX2.

RFX3_MOUSE
NC score	0.992076 (rank : 3)	θ value	0 (rank : 6)
Query Neighborhood Hits	24	Target Neighborhood Hits	17	Shared Neighborhood Hits	9
SwissProt Accessions	P48381, Q8BLW2, Q8C0R3, Q8VBY6	Gene names	Rfx3
Domain Architecture
Description	Transcription factor RFX3.

RFX3_HUMAN
NC score	0.991995 (rank : 4)	θ value	0 (rank : 5)
Query Neighborhood Hits	24	Target Neighborhood Hits	18	Shared Neighborhood Hits	9
SwissProt Accessions	P48380, Q5JTL7, Q5JTL8, Q6NW13, Q8WTU4, Q95HL5, Q95HL6	Gene names	RFX3
Domain Architecture
Description	Transcription factor RFX3.

RFX1_MOUSE
NC score	0.956579 (rank : 5)	θ value	0 (rank : 2)
Query Neighborhood Hits	24	Target Neighborhood Hits	181	Shared Neighborhood Hits	12
SwissProt Accessions	P48377	Gene names	Rfx1
Domain Architecture
Description	DNA-binding protein RFX1.

RFX1_HUMAN
NC score	0.934246 (rank : 6)	θ value	0 (rank : 1)
Query Neighborhood Hits	24	Target Neighborhood Hits	256	Shared Neighborhood Hits	11
SwissProt Accessions	P22670	Gene names	RFX1
Domain Architecture
Description	MHC class II regulatory factor RFX1 (RFX) (Enhancer factor C) (EF-C).

RFX5_HUMAN
NC score	0.544982 (rank : 7)	θ value	1.9326e-10 (rank : 7)
Query Neighborhood Hits	24	Target Neighborhood Hits	59	Shared Neighborhood Hits	8
SwissProt Accessions	P48382	Gene names	RFX5
Domain Architecture
Description	DNA-binding protein RFX5 (Regulatory factor X subunit 5).

ARID2_HUMAN
NC score	0.095007 (rank : 8)	θ value	0.62314 (rank : 9)
Query Neighborhood Hits	24	Target Neighborhood Hits	302	Shared Neighborhood Hits	11
SwissProt Accessions	Q68CP9, Q5EB51, Q645I3, Q6ZRY5, Q7Z3I5, Q86T28, Q96SJ6, Q9HCL5	Gene names	ARID2, KIAA1557
Domain Architecture	No domain graphic available
Description	AT-rich interactive domain-containing protein 2 (ARID domain- containing protein 2) (BRG1-associated factor 200) (BAF200).

YLPM1_MOUSE
NC score	0.027418 (rank : 9)	θ value	0.813845 (rank : 10)
Query Neighborhood Hits	24	Target Neighborhood Hits	505	Shared Neighborhood Hits	8
SwissProt Accessions	Q9R0I7, Q7TMM4	Gene names	Ylpm1, Zap, Zap3
Domain Architecture	No domain graphic available
Description	YLP motif-containing protein 1 (Nuclear protein ZAP3).

RGS3_HUMAN
NC score	0.020199 (rank : 10)	θ value	0.279714 (rank : 8)
Query Neighborhood Hits	24	Target Neighborhood Hits	1375	Shared Neighborhood Hits	9
SwissProt Accessions	P49796, Q5VXC1, Q5VZ05, Q6ZRM5, Q8IUQ1, Q8NC47, Q8NFN4, Q8NFN5, Q8TD59, Q8TD68, Q8WXA0	Gene names	RGS3
Domain Architecture
Description	Regulator of G-protein signaling 3 (RGS3) (RGP3).

U689_HUMAN
NC score	0.018075 (rank : 11)	θ value	5.27518 (rank : 17)
Query Neighborhood Hits	24	Target Neighborhood Hits	26	Shared Neighborhood Hits	2
SwissProt Accessions	Q6UX39	Gene names	ames=UNQ689/PRO1329
Domain Architecture	No domain graphic available
Description	Protein UNQ689/PRO1329 precursor.

MINT_MOUSE
NC score	0.016994 (rank : 12)	θ value	8.99809 (rank : 23)
Query Neighborhood Hits	24	Target Neighborhood Hits	1514	Shared Neighborhood Hits	10
SwissProt Accessions	Q62504, Q80TN9, Q99PS4, Q9QZW2	Gene names	Spen, Kiaa0929, Mint, Sharp
Domain Architecture
Description	Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein).

TCF20_MOUSE
NC score	0.014626 (rank : 13)	θ value	4.03905 (rank : 15)
Query Neighborhood Hits	24	Target Neighborhood Hits	396	Shared Neighborhood Hits	5
SwissProt Accessions	Q9EPQ8, Q60792	Gene names	Tcf20, Spbp
Domain Architecture	No domain graphic available
Description	Transcription factor 20 (Stromelysin 1 PDGF-responsive element-binding protein) (SPRE-binding protein) (Nuclear factor SPBP).

TCF20_HUMAN
NC score	0.013420 (rank : 14)	θ value	8.99809 (rank : 24)
Query Neighborhood Hits	24	Target Neighborhood Hits	323	Shared Neighborhood Hits	5
SwissProt Accessions	Q9UGU0, O14528, Q13078, Q4V353, Q9H4M0	Gene names	TCF20, KIAA0292, SPBP
Domain Architecture	No domain graphic available
Description	Transcription factor 20 (Stromelysin 1 PDGF-responsive element-binding protein) (SPRE-binding protein) (Nuclear factor SPBP) (AR1).

SOX3_HUMAN
NC score	0.012286 (rank : 15)	θ value	1.81305 (rank : 11)
Query Neighborhood Hits	24	Target Neighborhood Hits	109	Shared Neighborhood Hits	3
SwissProt Accessions	P41225, P35714, Q9NP49	Gene names	SOX3
Domain Architecture
Description	Transcription factor SOX-3.

NCOA6_MOUSE
NC score	0.012087 (rank : 16)	θ value	5.27518 (rank : 16)
Query Neighborhood Hits	24	Target Neighborhood Hits	1076	Shared Neighborhood Hits	10
SwissProt Accessions	Q9JL19, Q9JLT9	Gene names	Ncoa6, Aib3, Prip, Rap250, Trbp
Domain Architecture	No domain graphic available
Description	Nuclear receptor coactivator 6 (Amplified in breast cancer protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (PPAR-interacting protein) (Nuclear receptor-activating protein, 250 kDa) (Nuclear receptor coactivator RAP250) (NRC) (Thyroid hormone receptor-binding protein).

SOX3_MOUSE
NC score	0.010321 (rank : 17)	θ value	4.03905 (rank : 14)
Query Neighborhood Hits	24	Target Neighborhood Hits	101	Shared Neighborhood Hits	3
SwissProt Accessions	P53784	Gene names	Sox3, Sox-3
Domain Architecture
Description	Transcription factor SOX-3.

ABCAD_MOUSE
NC score	0.009321 (rank : 18)	θ value	2.36792 (rank : 12)
Query Neighborhood Hits	24	Target Neighborhood Hits	150	Shared Neighborhood Hits	4
SwissProt Accessions	Q5SSE9, Q80T20, Q8BHZ2, Q8CB91	Gene names	Abca13
Domain Architecture	No domain graphic available
Description	ATP-binding cassette sub-family A member 13.

K0020_MOUSE
NC score	0.008811 (rank : 19)	θ value	8.99809 (rank : 22)
Query Neighborhood Hits	24	Target Neighborhood Hits	49	Shared Neighborhood Hits	2
SwissProt Accessions	Q8BKS9, Q6A0E6, Q8BU15	Gene names	Kiaa0020
Domain Architecture	No domain graphic available
Description	Protein KIAA0020.

SYNE1_HUMAN
NC score	0.008722 (rank : 20)	θ value	6.88961 (rank : 19)
Query Neighborhood Hits	24	Target Neighborhood Hits	1484	Shared Neighborhood Hits	8
SwissProt Accessions	Q8NF91, O94890, Q5JV19, Q5JV22, Q8N9P7, Q8TCP1, Q8WWW6, Q8WWW7, Q8WXF6, Q96N17, Q9C0A7, Q9H525, Q9H526, Q9NS36, Q9NU50, Q9UJ06, Q9UJ07, Q9ULF8	Gene names	SYNE1, KIAA0796, KIAA1262, KIAA1756, MYNE1
Domain Architecture
Description	Nesprin-1 (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin).

GPTC8_HUMAN
NC score	0.008385 (rank : 21)	θ value	8.99809 (rank : 21)
Query Neighborhood Hits	24	Target Neighborhood Hits	366	Shared Neighborhood Hits	4
SwissProt Accessions	Q9UKJ3, O60300	Gene names	GPATC8, KIAA0553
Domain Architecture	No domain graphic available
Description	G patch domain-containing protein 8.

BNC1_MOUSE
NC score	0.008370 (rank : 22)	θ value	4.03905 (rank : 13)
Query Neighborhood Hits	24	Target Neighborhood Hits	582	Shared Neighborhood Hits	2
SwissProt Accessions	O35914, O54886	Gene names	Bnc1, Bnc
Domain Architecture	No domain graphic available
Description	Zinc finger protein basonuclin-1.

GOGB1_HUMAN
NC score	0.002727 (rank : 23)	θ value	8.99809 (rank : 20)
Query Neighborhood Hits	24	Target Neighborhood Hits	2297	Shared Neighborhood Hits	8
SwissProt Accessions	Q14789, Q14398	Gene names	GOLGB1
Domain Architecture
Description	Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa Golgi complex-associated protein) (GCP372).

PAX7_HUMAN
NC score	0.001998 (rank : 24)	θ value	6.88961 (rank : 18)
Query Neighborhood Hits	24	Target Neighborhood Hits	456	Shared Neighborhood Hits	2
SwissProt Accessions	P23759	Gene names	PAX7, HUP1
Domain Architecture
Description	Paired box protein Pax-7 (HUP1).