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Network neighborhood for query Sequence : MED28_MOUSE

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MED28_MOUSE
SwissProt Accessions	Q920D3, Q3U4G7, Q9CQF2	Gene names	Med28
Domain Architecture	No domain graphic available
Description	Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28).
Rank Plots	Jump to hits sorted by θ Jump to hits sorted by NC score

Hits sorted by θ

MED28_MOUSE
θ value	2.38869e-85 (rank : 1)	NC score	0.999962 (rank : 1)
Query Neighborhood Hits	20	Target Neighborhood Hits	20	Shared Neighborhood Hits	20
SwissProt Accessions	Q920D3, Q3U4G7, Q9CQF2	Gene names	Med28
Domain Architecture	No domain graphic available
Description	Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28).

MED28_HUMAN
θ value	2.0926e-81 (rank : 2)	NC score	0.995104 (rank : 2)
Query Neighborhood Hits	20	Target Neighborhood Hits	13	Shared Neighborhood Hits	10
SwissProt Accessions	Q9H204, Q9BZJ5	Gene names	MED28, EG1
Domain Architecture	No domain graphic available
Description	Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28) (Tumor angiogenesis marker EG-1) (Endothelial- derived protein 1) (Merlin and Grb2-interacting cytoskeletal protein) (Magicin).

K0555_HUMAN
θ value	0.163984 (rank : 3)	NC score	0.063337 (rank : 4)
Query Neighborhood Hits	20	Target Neighborhood Hits	880	Shared Neighborhood Hits	14
SwissProt Accessions	Q96AA8, O60302	Gene names	KIAA0555
Domain Architecture	No domain graphic available
Description	Protein KIAA0555.

CF060_HUMAN
θ value	0.47712 (rank : 4)	NC score	0.048124 (rank : 5)
Query Neighborhood Hits	20	Target Neighborhood Hits	1270	Shared Neighborhood Hits	15
SwissProt Accessions	Q8NB25, Q96GY8, Q9H851	Gene names	C6orf60
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C6orf60.

SPTA1_MOUSE
θ value	0.47712 (rank : 5)	NC score	0.047110 (rank : 6)
Query Neighborhood Hits	20	Target Neighborhood Hits	675	Shared Neighborhood Hits	13
SwissProt Accessions	P08032, P97502	Gene names	Spta1, Spna1, Spta
Domain Architecture
Description	Spectrin alpha chain, erythrocyte (Erythroid alpha-spectrin).

CENPE_HUMAN
θ value	0.62314 (rank : 6)	NC score	0.032130 (rank : 14)
Query Neighborhood Hits	20	Target Neighborhood Hits	2060	Shared Neighborhood Hits	19
SwissProt Accessions	Q02224	Gene names	CENPE
Domain Architecture
Description	Centromeric protein E (CENP-E).

CCD27_HUMAN
θ value	0.813845 (rank : 7)	NC score	0.068550 (rank : 3)
Query Neighborhood Hits	20	Target Neighborhood Hits	594	Shared Neighborhood Hits	15
SwissProt Accessions	Q2M243, Q5TBV3, Q96M50	Gene names	CCDC27
Domain Architecture	No domain graphic available
Description	Coiled-coil domain-containing protein 27.

EEA1_HUMAN
θ value	1.06291 (rank : 8)	NC score	0.036095 (rank : 9)
Query Neighborhood Hits	20	Target Neighborhood Hits	1796	Shared Neighborhood Hits	18
SwissProt Accessions	Q15075, Q14221	Gene names	EEA1, ZFYVE2
Domain Architecture
Description	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2).

EEA1_MOUSE
θ value	1.81305 (rank : 9)	NC score	0.035460 (rank : 10)
Query Neighborhood Hits	20	Target Neighborhood Hits	1637	Shared Neighborhood Hits	18
SwissProt Accessions	Q8BL66, Q6DIC2	Gene names	Eea1
Domain Architecture	No domain graphic available
Description	Early endosome antigen 1.

LIPA2_HUMAN
θ value	3.0926 (rank : 10)	NC score	0.041176 (rank : 7)
Query Neighborhood Hits	20	Target Neighborhood Hits	1044	Shared Neighborhood Hits	17
SwissProt Accessions	O75334	Gene names	PPFIA2
Domain Architecture
Description	Liprin-alpha-2 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-2) (PTPRF-interacting protein alpha-2).

LIPA2_MOUSE
θ value	3.0926 (rank : 11)	NC score	0.037619 (rank : 8)
Query Neighborhood Hits	20	Target Neighborhood Hits	1282	Shared Neighborhood Hits	16
SwissProt Accessions	Q8BSS9, Q8BN73	Gene names	Ppfia2
Domain Architecture
Description	Liprin-alpha-2 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-2) (PTPRF-interacting protein alpha-2).

K1C16_HUMAN
θ value	4.03905 (rank : 12)	NC score	0.016816 (rank : 18)
Query Neighborhood Hits	20	Target Neighborhood Hits	440	Shared Neighborhood Hits	12
SwissProt Accessions	P08779, P30654, Q16402, Q9UBG8	Gene names	KRT16, KRT16A
Domain Architecture
Description	Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16) (Keratin-16) (K16).

AZI1_MOUSE
θ value	5.27518 (rank : 13)	NC score	0.035163 (rank : 11)
Query Neighborhood Hits	20	Target Neighborhood Hits	990	Shared Neighborhood Hits	16
SwissProt Accessions	Q62036	Gene names	Azi1, Az1, Azi
Domain Architecture
Description	5-azacytidine-induced protein 1 (Pre-acrosome localization protein 1).

STX1A_HUMAN
θ value	5.27518 (rank : 14)	NC score	0.023556 (rank : 16)
Query Neighborhood Hits	20	Target Neighborhood Hits	266	Shared Neighborhood Hits	7
SwissProt Accessions	Q16623, O15447, O15448, Q12936, Q9BPZ6	Gene names	STX1A, STX1
Domain Architecture
Description	Syntaxin-1A (Neuron-specific antigen HPC-1).

STX1A_MOUSE
θ value	5.27518 (rank : 15)	NC score	0.023579 (rank : 15)
Query Neighborhood Hits	20	Target Neighborhood Hits	261	Shared Neighborhood Hits	7
SwissProt Accessions	O35526	Gene names	Stx1a
Domain Architecture
Description	Syntaxin-1A (Neuron-specific antigen HPC-1).

K1C16_MOUSE
θ value	6.88961 (rank : 16)	NC score	0.014296 (rank : 20)
Query Neighborhood Hits	20	Target Neighborhood Hits	444	Shared Neighborhood Hits	11
SwissProt Accessions	Q9Z2K1	Gene names	Krt16, Krt1-16
Domain Architecture
Description	Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16) (Keratin-16) (K16).

LAMA1_MOUSE
θ value	6.88961 (rank : 17)	NC score	0.014456 (rank : 19)
Query Neighborhood Hits	20	Target Neighborhood Hits	838	Shared Neighborhood Hits	14
SwissProt Accessions	P19137	Gene names	Lama1, Lama, Lama-1
Domain Architecture
Description	Laminin alpha-1 chain precursor (Laminin A chain).

TXND3_HUMAN
θ value	6.88961 (rank : 18)	NC score	0.019791 (rank : 17)
Query Neighborhood Hits	20	Target Neighborhood Hits	70	Shared Neighborhood Hits	3
SwissProt Accessions	Q8N427, Q9NZH1	Gene names	TXNDC3, NME8, SPTRX2
Domain Architecture	No domain graphic available
Description	Thioredoxin domain-containing protein 3 (Spermatid-specific thioredoxin-2) (Sptrx-2) (NM23-H8).

SYBU_HUMAN
θ value	8.99809 (rank : 19)	NC score	0.032770 (rank : 13)
Query Neighborhood Hits	20	Target Neighborhood Hits	188	Shared Neighborhood Hits	9
SwissProt Accessions	Q9NX95, Q5R1T1, Q5R1T2, Q5R1T3, Q5Y2M6, Q8ND49, Q8TCR6, Q9P256	Gene names	SYBU, GOLSYN, KIAA1472
Domain Architecture	No domain graphic available
Description	Syntabulin (Syntaxin-1-binding protein) (Golgi-localized syntaphilin- related protein).

SYBU_MOUSE
θ value	8.99809 (rank : 20)	NC score	0.033329 (rank : 12)
Query Neighborhood Hits	20	Target Neighborhood Hits	214	Shared Neighborhood Hits	10
SwissProt Accessions	Q8BHS8, Q3TQN7, Q401F3, Q401F4, Q571C1, Q6P1J2, Q80XH0, Q8BHS7, Q8BI27	Gene names	Sybu, Golsyn, Kiaa1472
Domain Architecture	No domain graphic available
Description	Syntabulin (Syntaxin-1-binding protein) (Golgi-localized syntaphilin- related protein) (m-Golsyn).

Hits sorted by NC score

MED28_MOUSE
NC score	0.999962 (rank : 1)	θ value	2.38869e-85 (rank : 1)
Query Neighborhood Hits	20	Target Neighborhood Hits	20	Shared Neighborhood Hits	20
SwissProt Accessions	Q920D3, Q3U4G7, Q9CQF2	Gene names	Med28
Domain Architecture	No domain graphic available
Description	Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28).

MED28_HUMAN
NC score	0.995104 (rank : 2)	θ value	2.0926e-81 (rank : 2)
Query Neighborhood Hits	20	Target Neighborhood Hits	13	Shared Neighborhood Hits	10
SwissProt Accessions	Q9H204, Q9BZJ5	Gene names	MED28, EG1
Domain Architecture	No domain graphic available
Description	Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28) (Tumor angiogenesis marker EG-1) (Endothelial- derived protein 1) (Merlin and Grb2-interacting cytoskeletal protein) (Magicin).

CCD27_HUMAN
NC score	0.068550 (rank : 3)	θ value	0.813845 (rank : 7)
Query Neighborhood Hits	20	Target Neighborhood Hits	594	Shared Neighborhood Hits	15
SwissProt Accessions	Q2M243, Q5TBV3, Q96M50	Gene names	CCDC27
Domain Architecture	No domain graphic available
Description	Coiled-coil domain-containing protein 27.

K0555_HUMAN
NC score	0.063337 (rank : 4)	θ value	0.163984 (rank : 3)
Query Neighborhood Hits	20	Target Neighborhood Hits	880	Shared Neighborhood Hits	14
SwissProt Accessions	Q96AA8, O60302	Gene names	KIAA0555
Domain Architecture	No domain graphic available
Description	Protein KIAA0555.

CF060_HUMAN
NC score	0.048124 (rank : 5)	θ value	0.47712 (rank : 4)
Query Neighborhood Hits	20	Target Neighborhood Hits	1270	Shared Neighborhood Hits	15
SwissProt Accessions	Q8NB25, Q96GY8, Q9H851	Gene names	C6orf60
Domain Architecture	No domain graphic available
Description	Uncharacterized protein C6orf60.

SPTA1_MOUSE
NC score	0.047110 (rank : 6)	θ value	0.47712 (rank : 5)
Query Neighborhood Hits	20	Target Neighborhood Hits	675	Shared Neighborhood Hits	13
SwissProt Accessions	P08032, P97502	Gene names	Spta1, Spna1, Spta
Domain Architecture
Description	Spectrin alpha chain, erythrocyte (Erythroid alpha-spectrin).

LIPA2_HUMAN
NC score	0.041176 (rank : 7)	θ value	3.0926 (rank : 10)
Query Neighborhood Hits	20	Target Neighborhood Hits	1044	Shared Neighborhood Hits	17
SwissProt Accessions	O75334	Gene names	PPFIA2
Domain Architecture
Description	Liprin-alpha-2 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-2) (PTPRF-interacting protein alpha-2).

LIPA2_MOUSE
NC score	0.037619 (rank : 8)	θ value	3.0926 (rank : 11)
Query Neighborhood Hits	20	Target Neighborhood Hits	1282	Shared Neighborhood Hits	16
SwissProt Accessions	Q8BSS9, Q8BN73	Gene names	Ppfia2
Domain Architecture
Description	Liprin-alpha-2 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-2) (PTPRF-interacting protein alpha-2).

EEA1_HUMAN
NC score	0.036095 (rank : 9)	θ value	1.06291 (rank : 8)
Query Neighborhood Hits	20	Target Neighborhood Hits	1796	Shared Neighborhood Hits	18
SwissProt Accessions	Q15075, Q14221	Gene names	EEA1, ZFYVE2
Domain Architecture
Description	Early endosome antigen 1 (Endosome-associated protein p162) (Zinc finger FYVE domain-containing protein 2).

EEA1_MOUSE
NC score	0.035460 (rank : 10)	θ value	1.81305 (rank : 9)
Query Neighborhood Hits	20	Target Neighborhood Hits	1637	Shared Neighborhood Hits	18
SwissProt Accessions	Q8BL66, Q6DIC2	Gene names	Eea1
Domain Architecture	No domain graphic available
Description	Early endosome antigen 1.

AZI1_MOUSE
NC score	0.035163 (rank : 11)	θ value	5.27518 (rank : 13)
Query Neighborhood Hits	20	Target Neighborhood Hits	990	Shared Neighborhood Hits	16
SwissProt Accessions	Q62036	Gene names	Azi1, Az1, Azi
Domain Architecture
Description	5-azacytidine-induced protein 1 (Pre-acrosome localization protein 1).

SYBU_MOUSE
NC score	0.033329 (rank : 12)	θ value	8.99809 (rank : 20)
Query Neighborhood Hits	20	Target Neighborhood Hits	214	Shared Neighborhood Hits	10
SwissProt Accessions	Q8BHS8, Q3TQN7, Q401F3, Q401F4, Q571C1, Q6P1J2, Q80XH0, Q8BHS7, Q8BI27	Gene names	Sybu, Golsyn, Kiaa1472
Domain Architecture	No domain graphic available
Description	Syntabulin (Syntaxin-1-binding protein) (Golgi-localized syntaphilin- related protein) (m-Golsyn).

SYBU_HUMAN
NC score	0.032770 (rank : 13)	θ value	8.99809 (rank : 19)
Query Neighborhood Hits	20	Target Neighborhood Hits	188	Shared Neighborhood Hits	9
SwissProt Accessions	Q9NX95, Q5R1T1, Q5R1T2, Q5R1T3, Q5Y2M6, Q8ND49, Q8TCR6, Q9P256	Gene names	SYBU, GOLSYN, KIAA1472
Domain Architecture	No domain graphic available
Description	Syntabulin (Syntaxin-1-binding protein) (Golgi-localized syntaphilin- related protein).

CENPE_HUMAN
NC score	0.032130 (rank : 14)	θ value	0.62314 (rank : 6)
Query Neighborhood Hits	20	Target Neighborhood Hits	2060	Shared Neighborhood Hits	19
SwissProt Accessions	Q02224	Gene names	CENPE
Domain Architecture
Description	Centromeric protein E (CENP-E).

STX1A_MOUSE
NC score	0.023579 (rank : 15)	θ value	5.27518 (rank : 15)
Query Neighborhood Hits	20	Target Neighborhood Hits	261	Shared Neighborhood Hits	7
SwissProt Accessions	O35526	Gene names	Stx1a
Domain Architecture
Description	Syntaxin-1A (Neuron-specific antigen HPC-1).

STX1A_HUMAN
NC score	0.023556 (rank : 16)	θ value	5.27518 (rank : 14)
Query Neighborhood Hits	20	Target Neighborhood Hits	266	Shared Neighborhood Hits	7
SwissProt Accessions	Q16623, O15447, O15448, Q12936, Q9BPZ6	Gene names	STX1A, STX1
Domain Architecture
Description	Syntaxin-1A (Neuron-specific antigen HPC-1).

TXND3_HUMAN
NC score	0.019791 (rank : 17)	θ value	6.88961 (rank : 18)
Query Neighborhood Hits	20	Target Neighborhood Hits	70	Shared Neighborhood Hits	3
SwissProt Accessions	Q8N427, Q9NZH1	Gene names	TXNDC3, NME8, SPTRX2
Domain Architecture	No domain graphic available
Description	Thioredoxin domain-containing protein 3 (Spermatid-specific thioredoxin-2) (Sptrx-2) (NM23-H8).

K1C16_HUMAN
NC score	0.016816 (rank : 18)	θ value	4.03905 (rank : 12)
Query Neighborhood Hits	20	Target Neighborhood Hits	440	Shared Neighborhood Hits	12
SwissProt Accessions	P08779, P30654, Q16402, Q9UBG8	Gene names	KRT16, KRT16A
Domain Architecture
Description	Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16) (Keratin-16) (K16).

LAMA1_MOUSE
NC score	0.014456 (rank : 19)	θ value	6.88961 (rank : 17)
Query Neighborhood Hits	20	Target Neighborhood Hits	838	Shared Neighborhood Hits	14
SwissProt Accessions	P19137	Gene names	Lama1, Lama, Lama-1
Domain Architecture
Description	Laminin alpha-1 chain precursor (Laminin A chain).

K1C16_MOUSE
NC score	0.014296 (rank : 20)	θ value	6.88961 (rank : 16)
Query Neighborhood Hits	20	Target Neighborhood Hits	444	Shared Neighborhood Hits	11
SwissProt Accessions	Q9Z2K1	Gene names	Krt16, Krt1-16
Domain Architecture
Description	Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16) (Keratin-16) (K16).