Please be patient as the page loads

Stop Image Loading/Displaying

Network neighborhood for query Sequence : LDB2_MOUSE

For an explanation of this page, click here

LDB2_MOUSE
 
SwissProt Accessions O55203, O55205, Q6AXE6 Gene names Ldb2, Clim1
Domain
Architecture

No domain graphic available

Description LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM-domain-binding factor CLIM1).
Rank Plots



Hits sorted by θ


LDB2_HUMAN
 
θ value 0 (rank : 1) NC score 0.999309 (rank : 2)
Query Neighborhood Hits 10 Target Neighborhood Hits 11 Shared Neighborhood Hits 6
SwissProt Accessions O43679 Gene names LDB2, CLIM1
Domain
Architecture

No domain graphic available

Description LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM domain-binding factor CLIM1).
LDB2_MOUSE
 
θ value 0 (rank : 2) NC score 0.999962 (rank : 1)
Query Neighborhood Hits 10 Target Neighborhood Hits 10 Shared Neighborhood Hits 10
SwissProt Accessions O55203, O55205, Q6AXE6 Gene names Ldb2, Clim1
Domain
Architecture

No domain graphic available

Description LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM-domain-binding factor CLIM1).
LDB1_HUMAN
 
θ value 2.26584e-152 (rank : 3) NC score 0.996252 (rank : 3)
Query Neighborhood Hits 10 Target Neighborhood Hits 7 Shared Neighborhood Hits 5
SwissProt Accessions Q86U70, O96010, Q9UGM4 Gene names LDB1, CLIM2
Domain
Architecture

No domain graphic available

Description LIM domain-binding protein 1 (Carboxyl-terminal LIM domain-binding protein 2) (CLIM-2) (LIM domain-binding factor CLIM2).
LDB1_MOUSE
 
θ value 2.26584e-152 (rank : 4) NC score 0.996132 (rank : 4)
Query Neighborhood Hits 10 Target Neighborhood Hits 7 Shared Neighborhood Hits 5
SwissProt Accessions P70662 Gene names Ldb1, Nli
Domain
Architecture
Description LIM domain-binding protein 1 (Nuclear LIM interactor).
NKX61_HUMAN
 
θ value 3.0926 (rank : 5) NC score 0.011818 (rank : 6)
Query Neighborhood Hits 10 Target Neighborhood Hits 431 Shared Neighborhood Hits 5
SwissProt Accessions P78426 Gene names NKX6-1, NKX6A
Domain
Architecture
Description Homeobox protein Nkx-6.1.
SYNE1_HUMAN
 
θ value 4.03905 (rank : 6) NC score 0.010991 (rank : 7)
Query Neighborhood Hits 10 Target Neighborhood Hits 1484 Shared Neighborhood Hits 6
SwissProt Accessions Q8NF91, O94890, Q5JV19, Q5JV22, Q8N9P7, Q8TCP1, Q8WWW6, Q8WWW7, Q8WXF6, Q96N17, Q9C0A7, Q9H525, Q9H526, Q9NS36, Q9NU50, Q9UJ06, Q9UJ07, Q9ULF8 Gene names SYNE1, KIAA0796, KIAA1262, KIAA1756, MYNE1
Domain
Architecture
Description Nesprin-1 (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin).
ZCC2_HUMAN
 
θ value 4.03905 (rank : 7) NC score 0.017567 (rank : 5)
Query Neighborhood Hits 10 Target Neighborhood Hits 47 Shared Neighborhood Hits 2
SwissProt Accessions Q7Z2W4, Q8IW57, Q8TAJ3, Q96N79, Q9H8R9, Q9P0Y7 Gene names ZC3HAV1, ZC3HDC2
Domain
Architecture
Description Zinc finger CCCH type antiviral protein 1 (Zinc finger CCCH domain- containing protein 2).
NKX61_MOUSE
 
θ value 8.99809 (rank : 8) NC score 0.006420 (rank : 8)
Query Neighborhood Hits 10 Target Neighborhood Hits 439 Shared Neighborhood Hits 4
SwissProt Accessions Q99MA9, Q9ERQ7 Gene names Nkx6-1, Nkx6.1, Nkx6a
Domain
Architecture
Description Homeobox protein Nkx-6.1.
SYN1_MOUSE
 
θ value 8.99809 (rank : 9) NC score 0.006398 (rank : 9)
Query Neighborhood Hits 10 Target Neighborhood Hits 363 Shared Neighborhood Hits 3
SwissProt Accessions O88935, Q62279, Q8QZT8 Gene names Syn1, Syn-1
Domain
Architecture
Description Synapsin-1 (Synapsin I).
TARA_HUMAN
 
θ value 8.99809 (rank : 10) NC score 0.004149 (rank : 10)
Query Neighborhood Hits 10 Target Neighborhood Hits 1626 Shared Neighborhood Hits 6
SwissProt Accessions Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4 Gene names TRIOBP, KIAA1662, TARA
Domain
Architecture
Description TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).

Hits sorted by NC score


LDB2_MOUSE
 
NC score 0.999962 (rank : 1) θ value 0 (rank : 2)
Query Neighborhood Hits 10 Target Neighborhood Hits 10 Shared Neighborhood Hits 10
SwissProt Accessions O55203, O55205, Q6AXE6 Gene names Ldb2, Clim1
Domain
Architecture

No domain graphic available

Description LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM-domain-binding factor CLIM1).
LDB2_HUMAN
 
NC score 0.999309 (rank : 2) θ value 0 (rank : 1)
Query Neighborhood Hits 10 Target Neighborhood Hits 11 Shared Neighborhood Hits 6
SwissProt Accessions O43679 Gene names LDB2, CLIM1
Domain
Architecture

No domain graphic available

Description LIM domain-binding protein 2 (Carboxyl-terminal LIM domain-binding protein 1) (CLIM-1) (LIM domain-binding factor CLIM1).
LDB1_HUMAN
 
NC score 0.996252 (rank : 3) θ value 2.26584e-152 (rank : 3)
Query Neighborhood Hits 10 Target Neighborhood Hits 7 Shared Neighborhood Hits 5
SwissProt Accessions Q86U70, O96010, Q9UGM4 Gene names LDB1, CLIM2
Domain
Architecture

No domain graphic available

Description LIM domain-binding protein 1 (Carboxyl-terminal LIM domain-binding protein 2) (CLIM-2) (LIM domain-binding factor CLIM2).
LDB1_MOUSE
 
NC score 0.996132 (rank : 4) θ value 2.26584e-152 (rank : 4)
Query Neighborhood Hits 10 Target Neighborhood Hits 7 Shared Neighborhood Hits 5
SwissProt Accessions P70662 Gene names Ldb1, Nli
Domain
Architecture
Description LIM domain-binding protein 1 (Nuclear LIM interactor).
ZCC2_HUMAN
 
NC score 0.017567 (rank : 5) θ value 4.03905 (rank : 7)
Query Neighborhood Hits 10 Target Neighborhood Hits 47 Shared Neighborhood Hits 2
SwissProt Accessions Q7Z2W4, Q8IW57, Q8TAJ3, Q96N79, Q9H8R9, Q9P0Y7 Gene names ZC3HAV1, ZC3HDC2
Domain
Architecture
Description Zinc finger CCCH type antiviral protein 1 (Zinc finger CCCH domain- containing protein 2).
NKX61_HUMAN
 
NC score 0.011818 (rank : 6) θ value 3.0926 (rank : 5)
Query Neighborhood Hits 10 Target Neighborhood Hits 431 Shared Neighborhood Hits 5
SwissProt Accessions P78426 Gene names NKX6-1, NKX6A
Domain
Architecture
Description Homeobox protein Nkx-6.1.
SYNE1_HUMAN
 
NC score 0.010991 (rank : 7) θ value 4.03905 (rank : 6)
Query Neighborhood Hits 10 Target Neighborhood Hits 1484 Shared Neighborhood Hits 6
SwissProt Accessions Q8NF91, O94890, Q5JV19, Q5JV22, Q8N9P7, Q8TCP1, Q8WWW6, Q8WWW7, Q8WXF6, Q96N17, Q9C0A7, Q9H525, Q9H526, Q9NS36, Q9NU50, Q9UJ06, Q9UJ07, Q9ULF8 Gene names SYNE1, KIAA0796, KIAA1262, KIAA1756, MYNE1
Domain
Architecture
Description Nesprin-1 (Nuclear envelope spectrin repeat protein 1) (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin).
NKX61_MOUSE
 
NC score 0.006420 (rank : 8) θ value 8.99809 (rank : 8)
Query Neighborhood Hits 10 Target Neighborhood Hits 439 Shared Neighborhood Hits 4
SwissProt Accessions Q99MA9, Q9ERQ7 Gene names Nkx6-1, Nkx6.1, Nkx6a
Domain
Architecture
Description Homeobox protein Nkx-6.1.
SYN1_MOUSE
 
NC score 0.006398 (rank : 9) θ value 8.99809 (rank : 9)
Query Neighborhood Hits 10 Target Neighborhood Hits 363 Shared Neighborhood Hits 3
SwissProt Accessions O88935, Q62279, Q8QZT8 Gene names Syn1, Syn-1
Domain
Architecture
Description Synapsin-1 (Synapsin I).
TARA_HUMAN
 
NC score 0.004149 (rank : 10) θ value 8.99809 (rank : 10)
Query Neighborhood Hits 10 Target Neighborhood Hits 1626 Shared Neighborhood Hits 6
SwissProt Accessions Q9H2D6, O94797, Q2PZW8, Q2Q3Z9, Q2Q400, Q5R3M6, Q96DW1, Q9BT77, Q9BTL7, Q9BY98, Q9Y3L4 Gene names TRIOBP, KIAA1662, TARA
Domain
Architecture
Description TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin).